Pregenerated sensors for PKD2L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014503Ensembl transcript IDs: ENSMUST00000014647.9, ENSMUST00000166156.9
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTCTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGGGACTAAAGGCGTGCGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NSLSRPGWPRTQKSA*LCLPSAGTKGVRHH Trigger: GTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAGAGTGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 90 bp | GCTTCATCTCCAGATGACCACCGCTCGCTCGCCCGCCCAGTTGCTTaGTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTC | + |
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Preference number: 1 (lower is better) Translates to: ASSPDDHRSLARPVA*CSEQPLTGCVVVCF Trigger: GAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCGGTGGTCATCTGGAGATGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| 3UTR GCA 90 bp | GTGCTTGTGTTCCCTGACAGTTCACCATGTGTGCTTGGCTGTACTTaGGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: VLVFPDSSPCVLGCT*VHFVRHSESPIVCL Trigger: CAAGCACACAATGGGACTCTCTGAGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 90 bp | GTTGACGCCATAAAGTGCTTGTGTTCCCTGACAGTTCACCATGTGTaGTTGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: VDAIKCLCSLTVHHV*LAVLAFTLSGTQRV Trigger: GACTCTCTGAGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTTTATGGCGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 90 bp | TGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTaGTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC | + |
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Preference number: 1 (lower is better) Translates to: CTCVHFVRHSESPIV*LFVVPVGKESCSTF Trigger: GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGAGTGCCTGACAAAGTGAACGCAAGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 90 bp | GTTTTATCTTCCCTAGGAATGCCCAGAAGGAGGATCGTGTTCCGGTaGTTGAGGAATATAAGGAATACAAGAGAATCAAAGCCAAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: VLSSLGMPRRRIVFR*LRNIRNTRESKPSL Trigger: TAAGCTTGGCTTTGATTCTCTTGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTCTGGGCATTCCTAGGGAAGATAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 90 bp | CAAAATCCATATAAAATATGTTCCTTGAAAGTTGACGCCATAAAGTaGTTGTGTTCCCTGACAGTTCACCATGTGTGCTTGGCTGTACTT | + |
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Preference number: 1 (lower is better) Translates to: QNPYKICSLKVDAIK*LCSLTVHHVCLAVL Trigger: AAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTTTATGGCGTCAACTTTCAAGGAACATATTTTATATGGATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR TCA 90 bp | GCGTTCTATCAACAAAATGGAAGGTTTGTTAAGCATTGGCGATACTaGCATCTTTGTCCTTCAACTCATGAGATGTATGTTAATATAGTG | + |
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Preference number: 1 (lower is better) Translates to: AFYQQNGRFVKHWRY*HLCPSTHEMYVNIV Trigger: CACTATATTAACATACATCTCATGAGTTGAAGGACAAAGATGTCAGTATCGCCAATGCTTAACAAACCTTCCATTTTGTTGATAGAACGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR GCA 90 bp | ATGATAGAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTCTGGGACTAAAGGCGTaGGCCACCACTGCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: MIENTKCLPVASAGAGTCLGLKA*ATTAWL Trigger: CAGCCAGGCAGTGGTGGCGCACGCCTTTAGTCCCAG...ACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTCTATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR GCA 90 bp | ACCGCTCGCTCGCCCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATTTTTTCGTTTGGCTTTaGATGGCTTTTCAGATAATC | + |
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Preference number: 2 (lower is better) Translates to: TARSPAQLLAVQSSRSQDFFVWL*MAFQII Trigger: GATTATCTGAAAAGCCATGCAAAGCCAAACGAAAAA...ATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCGGT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| 3UTR CAA 90 bp | GACGCCATAAAGTGCTTGTGTTCCCTGACAGTTCACCATGTGTGCTaGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DAIKCLCSLTVHHVC*AVLAFTLSGTQRVP Trigger: TGGGACTCTCTGAGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTTTATGGCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 90 bp | ACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTGCTaGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCG | + |
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Preference number: 2 (lower is better) Translates to: TCVHFVRHSESPIVC*FVVPVGKESCSTFP Trigger: CGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGAGTGCCTGACAAAGTGAACGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 90 bp | TCCCTGACAGTTCACCATGTGTGCTTGGCTGTACTTGCGTTCACTTaGTCAGGCACTCAGAGAGTCCCATTGTGTGCTTGTTTGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SLTVHHVCLAVLAFT*SGTQRVPLCACLWF Trigger: GAACCACAAACAAGCACACAATGGGACTCTCTGAGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR TCA 90 bp | CGTGCGCCACCACTGCCTGGCTGGCTTTCTCTTAAGCATGTATATGTGTATAGCAATGTTCTTCCTGTGTaGCTTAGTCCAATAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RAPPLPGWLSLKHVYVYSNVLPV*LSPIAS Trigger: AGAGGCTATTGGACTAAGTCACACAGGAAGAACATT...GCTATACACATATACATGCTTAAGAGAAAGCCAGCCAGGCAGTGGTGGCGCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR GCA 90 bp | ATGATAGAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTGTGCTTGGCTGTACTTaGGTTCACTTTGTCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: MIENTKCLPVASAGAGTCVLGCT*VHFVRH Trigger: GTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCAC...ACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTCTATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGACAGTTCACCATGTGTaGTTGGCTGTACTTGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: GKPELRKRNYVRCYGSLKTVHHV*LAVLAF Trigger: GAACGCAAGTACAGCCAAGCACACATGGTGAACTGT...CTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CCA 90 bp | ATGATAGAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTTCAGTGAGTACCTGCTaGGTACTAAGATGTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: MIENTKCLPVASAGAGTCSVSTC*VLRCGS Trigger: AGATCCACATCTTAGTACCCAGCAGGTACTCACTGA...ACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTCTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 90 bp | TTATCTTCCCTAGGAATGCCCAGAAGGAGGATCGTGTTCCGGTGCTaGAGGAATATAAGGAATACAAGAGAATCAAAGCCAAGCTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: LSSLGMPRRRIVFRC*RNIRNTRESKPSLD Trigger: GTCTAAGCTTGGCTTTGATTCTCTTGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTCTGGGCATTCCTAGGGAAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCTTTAACTGGTGTGCAGAGTTGACAGTTGGGGAGAGGTACAGATTGGTACTTGAGGCTCCTCAGTaGAAAATGATAGAGAATACC | + |
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Preference number: 2 (lower is better) Translates to: CVFNWCAELTVGERYRLVLEAPQ*KMIENT Trigger: GGTATTCTCTATCATTTTTCACTGAGGAGCCTCAAG...TACCAATCTGTACCTCTCCCCAACTGTCAACTCTGCACACCAGTTAAAGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAACCACCACTGCCTGGCTaGCTTTCTCTTAAGCATGTA | + |
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Preference number: 2 (lower is better) Translates to: KARAEKKKLRKMLREFEEPPLPG*LSLKHV Trigger: TACATGCTTAAGAGAAAGCCAGCCAGGCAGTGGTGG...TTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGATGTTCCTTGAAAGTTaGCGCCATAAAGTGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: GKPELRKRNYVRCYGSLKMFLES*RHKVLV Trigger: CACAAGCACTTTATGGCGTCAACTTTCAAGGAACAT...CTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 90 bp | AATCCATATAAAATATGTTCCTTGAAAGTTGACGCCATAAAGTGCTaGTGTTCCCTGACAGTTCACCATGTGTGCTTGGCTGTACTTGCG | + |
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Preference number: 2 (lower is better) Translates to: NPYKICSLKVDAIKC*CSLTVHHVCLAVLA Trigger: CGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTTTATGGCGTCAACTTTCAAGGAACATATTTTATATGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 90 bp | TGCTACGGGAGTTTGAAGAAGCGTTCTATCAACAAAATGGAAGGTTaGTTAAGCATTGGCGATACTGACATCTTTGTCCTTCAACTCATG | + |
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Preference number: 2 (lower is better) Translates to: CYGSLKKRSINKMEG*LSIGDTDIFVLQLM Trigger: CATGAGTTGAAGGACAAAGATGTCAGTATCGCCAATGCTTAACAAACCTTCCATTTTGTTGATAGAACGCTTCTTCAAACTCCCGTAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CCA 90 bp | AATTACTGGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGACCCTGCCTCAAAAAGTaGACAAGACACCCAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: NYWNNFGKPELRKRNYVRPCLKK*TRHPRF Trigger: AAACCTTGGGTGTCTTGTCCACTTTTTGAGGCAGGG...TCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCAGTAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 90 bp | AAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTaGAAGAAGCGTTCTATCAACAAAATGGAAGGTTTGTTAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: KPELRKRNYVRCYGS*KKRSINKMEGLLSI Trigger: AATGCTTAACAAACCTTCCATTTTGTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 72 bp | CCAGATGACCACCGCTCGCTCGCCCGCCCAGTTGCTTaGTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: PDDHRSLARPVA*CSEQPLTGCVV Trigger: CACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCGGTGGTCATCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| 3UTR GCA 72 bp | TCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGGGACTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: SRPGWPRTQKSA*LCLPSAGTKGV Trigger: CACGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR TCA 72 bp | GCTTTCCAGGTTTATTCAGGGGGCTTCATCTCCAGATaGCCACCGCTCGCTCGCCCGCCCAGTTGCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: AFQVYSGGFISR*PPLARPPSCLL Trigger: CAGCAAGCAACTGGGCGGGCGAGCGAGCGGTGGTCATCTGGAGATGAAGCCCCCTGAATAAACCTGGAAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| 3UTR GCA 72 bp | CTCCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACTaGCTGGCTGGCTTTCTCTTAAGCATGTATATGTGT | + |
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Preference number: 3 (lower is better) Translates to: LPSAGTKGVRHH*LAGFLLSMYMC Trigger: ACACATATACATGCTTAAGAGAAAGCCAGCCAGGCAGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 72 bp | TTCCCTGACAGTTCACCATGTGTGCTTGGCTGTACTTaGGTTCACTTTGTCAGGCACTCAGAGAGTCCCATT | + |
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Preference number: 3 (lower is better) Translates to: FPDSSPCVLGCT*VHFVRHSESPI Trigger: AATGGGACTCTCTGAGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CAA 90 bp | GGAATGCCCAGAAGGAGGATCGTGTTCCGGTGCTTGAGGAATATAAGGAATACAAGTCCCATTGTGTGCTaGTTTGTGGTTCCAGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: GMPRRRIVFRCLRNIRNTSPIVC*FVVPVG Trigger: GCCTACTGGAACCACAAACAAGCACACAATGGGACT...TGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTCTGGGCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CAA 90 bp | ATGATAGAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTGACGCCATAAAGTGCTaGTGTTCCCTGACAGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: MIENTKCLPVASAGAGTCDAIKC*CSLTVH Trigger: GTGAACTGTCAGGGAACACAAGCACTTTATGGCGTC...ACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTCTATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CAA 90 bp | ATGATAGAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTACTCAGAGAGTCCCATaGTGTGCTTGTTTGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: MIENTKCLPVASAGAGTCTQRVP*CACLWF Trigger: GAACCACAAACAAGCACACAATGGGACTCTCTGAGT...ACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTCTATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 72 bp | ATAAAGTGCTTGTGTTCCCTGACAGTTCACCATGTGTaGTTGGCTGTACTTGCGTTCACTTTGTCAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: IKCLCSLTVHHV*LAVLAFTLSGT Trigger: AGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGCTAAAAACAAGCAGCTaGAGGCTCCTCAGTGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: GKPELRKRNYVRCYGSLKLKTSS*RLLSEK Trigger: TTTTTCACTGAGGAGCCTCAAGCTGCTTGTTTTTAG...CTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAACAAAATGGAAGGTTaGTTAAGCATTGGCGATACT | + |
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Preference number: 3 (lower is better) Translates to: GKPELRKRNYVRCYGSLKNKMEG*LSIGDT Trigger: AGTATCGCCAATGCTTAACAAACCTTCCATTTTGTT...CTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR TCA 72 bp | AGTCCAACTAAAAACAAGCAGCTTGAGGCTCCTCAGTaGAAAATGATAGAGAATACCAAATGTCTTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SPTKNKQLEAPQ*KMIENTKCLPV Trigger: CACAGGAAGACATTTGGTATTCTCTATCATTTTTCACTGAGGAGCCTCAAGCTGCTTGTTTTTAGTTGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR GCA 72 bp | TATAAAATATGTTCCTTGAAAGTTGACGCCATAAAGTaGTTGTGTTCCCTGACAGTTCACCATGTGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: YKICSLKVDAIK*LCSLTVHHVCL Trigger: CAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTTTATGGCGTCAACTTTCAAGGAACATATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR TCA 72 bp | CAACAAAATGGAAGGTTTGTTAAGCATTGGCGATACTaGCATCTTTGTCCTTCAACTCATGAGATGTATGTT | + |
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Preference number: 3 (lower is better) Translates to: QQNGRFVKHWRY*HLCPSTHEMYV Trigger: AACATACATCTCATGAGTTGAAGGACAAAGATGTCAGTATCGCCAATGCTTAACAAACCTTCCATTTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 72 bp | CATCTCCAGATGACCACCGCTCGCTCGCCCGCCCAGTaGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: HLQMTTARSPAQ*LAVQSSRSQDV Trigger: CACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCGGTGGTCATCTGGAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR GCA 90 bp | CCACCGCTCGCTCGCCCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGCTGCATGTTACAGTATaGATAGAAAGACACGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PPLARPPSCLLFRAAAHRLHVTV*IERHGE Trigger: CTCGCCGTGTCTTTCTATGCATACTGTAACATGCAG...CCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR TCA 90 bp | CGCTCGCTCGCCCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTAGTAGGAGACGTATCTaGGGAGCTTCACAGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RSLARPVACCSEQPLTGCSRRRI*GASQSR Trigger: TCTACTCTGTGAAGCTCCTCAGATACGTCTCCTACT...ACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR TCA 90 bp | GCTCGCTCGCCCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGGGAATTCTTGCTGAGTaGCAGGCTGATAATCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ARSPAQLLAVQSSRSQDVGILAE*QADNRL Trigger: AAGACGATTATCAGCCTGTCACTCAGCAAGAATTCC...CACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR GCA 90 bp | GCCCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTACCACGATGTCCTTCATaGAGCGGGAGAGTGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: ARPVACCSEQPLTGCVVVPRCPS*SGRVLM Trigger: CATCAACACTCTCCCGCTGCATGAAGGACATCGTGG...TACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR GCA 90 bp | CACCGCTCGCTCGCCCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATCTTTTCATCTGCTCTaGCTCTTGGATCTCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: HRSLARPVACCSEQPLTGSFHLL*LLDLTF Trigger: GAAAGTGAGATCCAAGAGGCAGAGCAGATGAAAAGA...TCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR TCA 90 bp | ATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGAGAACTGCCAGGAGGTaGGGAGCCCACCCGTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: IVCLFVVPVGKESCSTFPRTARR*GAHPSQ Trigger: CTGCGACGGGTGGGCTCCTCACCTCCTGGCAGTTCT...CGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR GCA 90 bp | GAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTGCACACAGTGCCATGGGGCAGTaGGGGAAGAAGGTGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: ENTKCLPVASAGAGTCAHSAMGQ*GKKVCA Trigger: CGCACACACCTTCTTCCCGCACTGCCCCATGGCACT...GTGTGCACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCTTGTCTGCTGTAGCAGTCGCTaGCCAGGGACTGGAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLFRAAAHRMCSGMLLVCCSSR*PGTGKL Trigger: CAGCTTTCCAGTCCCTGGTCAGCGACTGCTACAGCA...GACAAGAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR GCA 90 bp | CGTGCGCCACCACTGCCTGGCTGGCTTTCTCTTAAGCATGTATATGTGTATAGCCGTCGCAGGGAACTCTaGCAGCAGCCTGATGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPPLPGWLSLKHVYVYSRRREL*QQPDDA Trigger: TGCATCATCAGGCTGCTGGCAGAGTTCCCTGCGACG...GCTATACACATATACATGCTTAAGAGAAAGCCAGCCAGGCAGTGGTGGCGCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCTTGTCCGTCGCAGGGAACTCTaGCAGCAGCCTGATGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLLFRAAAHRMCSGMLLVRRREL*QQPDDA Trigger: TGCATCATCAGGCTGCTGGCAGAGTTCCCTGCGACG...GACAAGAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR GCA 90 bp | CTTTCCAGGTTTATTCAGGGGGCTTCATCTCCAGATGACCACCGCTCGCTCGCCAAGCTGGGTAGACCTTaGAAGTGTTGTTTCGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRFIQGASSPDDHRSLAKLGRP*KCCFGL Trigger: GAGTCCGAAACAACACTTGCAAGGTCTACCCAGCTT...GGCGAGCGAGCGGTGGTCATCTGGAGATGAAGCCCCCTGAATAAACCTGGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCCGGGAAGAAGGTGTGTaGGTCCATTCTGGATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVACCSEQPLTGCVVVCFREEGV*VHSGLR Trigger: ACGCAATCCAGAATGGACGCACACACCTTCTTCCCG...GAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR TCA 90 bp | CCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCATGCAGGTCATGTTTTaGAGTCCCTCCTCGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PVACCSEQPLTGCVVVCFMQVMF*SPSSVP Trigger: TGGTACCGAGGAGGGACTTCAAAACATGACCTGCAT...GAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR GCA 90 bp | GAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTGCACACCGGGAAGAAGGTGTGTaGGTCCATTCTGGATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ENTKCLPVASAGAGTCAHREEGV*VHSGLR Trigger: ACGCAATCCAGAATGGACGCACACACCTTCTTCCCG...GTGTGCACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | CGTGCGCCACCACTGCCTGGCTGGCTTTCTCTTAAGCATGTATATGTGTATAGCCCACGATGTCCTTCATaGAGCGGGAGAGTGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RAPPLPGWLSLKHVYVYSPRCPS*SGRVLM Trigger: CATCAACACTCTCCCGCTGCATGAAGGACATCGTGG...GCTATACACATATACATGCTTAAGAGAAAGCCAGCCAGGCAGTGGTGGCGCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCAGGTTTATTCAGGGGGCTTCATCTCCAGATGACCACCGCTCGCTCGCCAGTGTTGATGACAGCTaGGACATTGTCTCATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRFIQGASSPDDHRSLASVDDS*DIVSLK Trigger: CTTCAATGAGACAATGTCGCAGCTGTCATCAACACT...GGCGAGCGAGCGGTGGTCATCTGGAGATGAAGCCCCCTGAATAAACCTGGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR CCA 90 bp | CCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGATCTGCTCTGCCTCTTaGATCTCACTTTCATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPSCLLFRAAAHRMCSGMICSAS*ISLSSK Trigger: CTTTGATGAAAGTGAGATCCAAGAGGCAGAGCAGAT...CATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR TCA 90 bp | CCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGTGGTCTTCTGCCTATTaGATAATCAGCCTTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSCLLFRAAAHRMCSGMWSSAY*IISLNF Trigger: GAAGTTAAGGCTGATTATTCAATAGGCAGAAGACCA...CATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR GCA 90 bp | GAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTGCACACAAGCTGGGTAGACCTTaGAAGTGTTGTTTCGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ENTKCLPVASAGAGTCAHKLGRP*KCCFGL Trigger: GAGTCCGAAACAACACTTGCAAGGTCTACCCAGCTT...GTGTGCACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCATCCAGTTGGCCTGCTaGATGCCAGCAAAATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVACCSEQPLTGCVVVCFIQLAC*MPAKLK Trigger: CTTTAATTTTGCTGGCATCCAGCAGGCCAACTGGAT...GAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| 3UTR CAA 72 bp | GTTCACCATGTGTGCTTGGCTGTACTTGCGTTCACTTaGTCAGGCACTCAGAGAGTCCCATTGTGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VHHVCLAVLAFT*SGTQRVPLCAC Trigger: ACAAGCACACAATGGGACTCTCTGAGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| 3UTR CAA 72 bp | AAGTGCTTGTGTTCCCTGACAGTTCACCATGTGTGCTaGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLCSLTVHHVC*AVLAFTLSGTQ Trigger: CTGAGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGGGCTAGACCACTGCAGCTTTCCAGGTTTATTCAGGGGGCTTCATCTCCAGTAAATGTGCCAGTATaGAAGGAAGTAAAAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRARPLQLSRFIQGASSPVNVPV*KEVKVG Trigger: CCCGACTTTTACTTCCTTGCATACTGGCACATTTAC...TGGAGATGAAGCCCCCTGAATAAACCTGGAAAGCTGCAGTGGTCTAGCCCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGGGCTAGACCACTGCAGCTTTCCAGGTTTATTCAGGGGGCTTCATCTCCATTCCATCTTTTCATCTaGTCTGCCTCTTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRARPLQLSRFIQGASSPFHLFI*SASWIS Trigger: TGAGATCCAAGAGGCAGAGCAGATGAAAAGATGGAA...TGGAGATGAAGCCCCCTGAATAAACCTGGAAAGCTGCAGTGGTCTAGCCCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| 3UTR CAA 72 bp | ACCAGTGTGCTATGTGTCTTTAACTGGTGTGCAGAGTaGACAGTTGGGGAGAGGTACAGATTGGTACATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLCVFNWCAE*TVGERYRLVHP Trigger: GGGATGTACCAATCTGTACCTCTCCCCAACTGTCAACTCTGCACACCAGTTAAAGACACATAGCACACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTGTTTTACAGAGTTTTATCTTCCCTAGGAATGCCCAGAAGGAGGATTGCTGTAGCAGTCGCTaGCCAGGGACTGGAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSVLQSFIFPRNAQKEDCCSSR*PGTGKL Trigger: CAGCTTTCCAGTCCCTGGTCAGCGACTGCTACAGCA...ATCCTCCTTCTGGGCATTCCTAGGGAAGATAAAACTCTGTAAAACACTCAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCTTGTCGTAAAGATCCAGTTGGCCTaGTGGATGCCAGCAAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LLFRAAAHRMCSGMLLVVKIQLA*WMPAKL Trigger: TAATTTTGCTGGCATCCAGCAGGCCAACTGGATCTT...TACGACAAGAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR GCA 90 bp | CGTGCGCCACCACTGCCTGGCTGGCTTTCTCTTAAGCATGTATATGTGTATAGCTCTTTTCATCTGCTCTaGCTCTTGGATCTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAPPLPGWLSLKHVYVYSSFHLL*LLDLTF Trigger: GAAAGTGAGATCCAAGAGGCAGAGCAGATGAAAAGA...GCTATACACATATACATGCTTAAGAGAAAGCCAGCCAGGCAGTGGTGGCGCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR CCA 90 bp | CGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCAGCTTTCTCATCAGTTaGTTCAGTTTTAAACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RPVACCSEQPLTGCVVVCSFLIS*FSFKLT Trigger: TGTCAGTTTAAAACTGAACCAACTGATGAGAAAGCT...GCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR TCA 90 bp | GGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGATGCAGGTCATGTTTTaGAGTCCCTCCTCGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GKPELRKRNYVRCYGSLKMQVMF*SPSSVP Trigger: TGGTACCGAGGAGGGACTTCAAAACATGACCTGCAT...CTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| 3UTR CAA 72 bp | TGGTGTGCAGAGTTGACAGTTGGGGAGAGGTACAGATaGGTACATCCCTATGAACAGCCAGTCCAACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WCAELTVGERYR*VHPYEQPVQLK Trigger: TTTTAGTTGGACTGGCTGTTCATAGGGATGTACCAATCTGTACCTCTCCCCAACTGTCAACTCTGCACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR GCA 90 bp | ATGATAGAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTCTGCATGTTACAGTATaGATAGAAAGACACGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MIENTKCLPVASAGAGTCLHVTV*IERHGE Trigger: CTCGCCGTGTCTTTCTATGCATACTGTAACATGCAG...ACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTCTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCAGGTACCTGTGCACACACACTTAATTTACCTCAATTCTGCCACTACCGTAAATGTGCCAGTATaGAAGGAAGTAAAAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVQVPVHTHLIYLNSATTVNVPV*KEVKVG Trigger: CCCGACTTTTACTTCCTTGCATACTGGCACATTTAC...GGTAGTGGCAGAATTGAGGTAAATTAAGTGTGTGTGCACAGGTACCTGCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR GCA 90 bp | ATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGAGTGTTGATGACAGCTaGGACATTGTCTCATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVCLFVVPVGKESCSTFPSVDDS*DIVSLK Trigger: CTTCAATGAGACAATGTCGCAGCTGTCATCAACACT...CGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CCA 90 bp | CCAAGGGCTAGACCACTGCAGCTTTCCAGGTTTATTCAGGGGGCTTCATCTCCAGAAGGTCAACAAATTTaGCTTTGGTTTCAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRARPLQLSRFIQGASSPEGQQI*LWFQIL Trigger: CAAAATCTGAAACCAAAGCCAAATTTGTTGACCTTC...TGGAGATGAAGCCCCCTGAATAAACCTGGAAAGCTGCAGTGGTCTAGCCCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR CCA 90 bp | GGAATGCCCAGAAGGAGGATCGTGTTCCGGTGCTTGAGGAATATAAGGAATACAATCTGCTCTGCCTCTTaGATCTCACTTTCATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMPRRRIVFRCLRNIRNTICSAS*ISLSSK Trigger: CTTTGATGAAAGTGAGATCCAAGAGGCAGAGCAGAT...TGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTCTGGGCATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR TCA 90 bp | GGAATGCCCAGAAGGAGGATCGTGTTCCGGTGCTTGAGGAATATAAGGAATACATGGTCTTCTGCCTATTaGATAATCAGCCTTAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GMPRRRIVFRCLRNIRNTWSSAY*IISLNF Trigger: GAAGTTAAGGCTGATTATTCAATAGGCAGAAGACCA...TGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTCTGGGCATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR GCA 90 bp | TTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCTTGTCGTAGACTCTGGTGTCATTAATTATTaGCAAGAACATGTTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRAAAHRMCSGMLLVVDSGVINY*QEHVQE Trigger: CTCCTGAACATGTTCTTGGCAATAATTAATGACACC...AGAGTCTACGACAAGAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCAGGTACCTGTGCACACACACTTAATTTACCTCAATTCTGCCACTACCTCTGGGCCAAGTCAGTaGTTTGCATTTTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVQVPVHTHLIYLNSATTSGPSQ*FAFSFL Trigger: AAGAAAAGAAAATGCAAACCACTGACTTGGCCCAGA...GGTAGTGGCAGAATTGAGGTAAATTAAGTGTGTGTGCACAGGTACCTGCACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR CCA 90 bp | GAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTGCACACAGCTTTCTCATCAGTTaGTTCAGTTTTAAACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ENTKCLPVASAGAGTCAHSFLIS*FSFKLT Trigger: TGTCAGTTTAAAACTGAACCAACTGATGAGAAAGCT...GTGTGCACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGAGTGTTTTACAGAGTTTTATCTTCCCTAGGAATGCCCAGAAGGAGGATAGTAGGAGACGTATCTaGGGAGCTTCACAGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLSVLQSFIFPRNAQKEDSRRRI*GASQSR Trigger: TCTACTCTGTGAAGCTCCTCAGATACGTCTCCTACT...ATCCTCCTTCTGGGCATTCCTAGGGAAGATAAAACTCTGTAAAACACTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| 3UTR CAA 72 bp | AAAATATGTTCCTTGAAAGTTGACGCCATAAAGTGCTaGTGTTCCCTGACAGTTCACCATGTGTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KICSLKVDAIKC*CSLTVHHVCLA Trigger: AGCCAAGCACACATGGTGAACTGTCAGGGAACACAAGCACTTTATGGCGTCAACTTTCAAGGAACATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGGAATTCTTGCTGAGTaGCAGGCTGATAATCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KARAEKKKLRKMLREFEEGILAE*QADNRL Trigger: AAGACGATTATCAGCCTGTCACTCAGCAAGAATTCC...TTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAAAGATCCAGTTGGCCTaGTGGATGCCAGCAAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: KARAEKKKLRKMLREFEEKIQLA*WMPAKL Trigger: TAATTTTGCTGGCATCCAGCAGGCCAACTGGATCTT...TTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCAGGTACCTGTGCACACACACTTAATTTACCTCAATTCTGCCACTACCGAAGGTCAACAAATTTaGCTTTGGTTTCAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVQVPVHTHLIYLNSATTEGQQI*LWFQIL Trigger: CAAAATCTGAAACCAAAGCCAAATTTGTTGACCTTC...GGTAGTGGCAGAATTGAGGTAAATTAAGTGTGTGTGCACAGGTACCTGCACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAGTGTTTTACAGAGTTTTATCTTCCCTAGGAATGCCCAGAAGGAGGATATCCAGTTGGCCTGCTaGATGCCAGCAAAATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSVLQSFIFPRNAQKEDIQLAC*MPAKLK Trigger: CTTTAATTTTGCTGGCATCCAGCAGGCCAACTGGAT...ATCCTCCTTCTGGGCATTCCTAGGGAAGATAAAACTCTGTAAAACACTCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | AATTACTGGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATTCCATCTTTTCATCTaGTCTGCCTCTTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NYWNNFGKPELRKRNYVRFHLFI*SASWIS Trigger: TGAGATCCAAGAGGCAGAGCAGATGAAAAGATGGAA...TCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCAGTAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| 3UTR CAA 72 bp | CTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTaGAAGAAGCGTTCTATCAACAAAATGGAAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRKRNYVRCYGS*KKRSINKMEGL Trigger: CAAACCTTCCATTTTGTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| 3UTR CAA 72 bp | AGTTTGAAGAAGCGTTCTATCAACAAAATGGAAGGTTaGTTAAGCATTGGCGATACTGACATCTTTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLKKRSINKMEG*LSIGDTDIFVL Trigger: AAGGACAAAGATGTCAGTATCGCCAATGCTTAACAAACCTTCCATTTTGTTGATAGAACGCTTCTTCAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR GCA 90 bp | AATTACTGGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGAGGTGTCATTAATTATTaGCAAGAACATGTTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NYWNNFGKPELRKRNYVRGVINY*QEHVQE Trigger: CTCCTGAACATGTTCTTGGCAATAATTAATGACACC...TCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCAGTAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
||
| CDS-3UTR CAA 90 bp | CGCTCGCTCGCCCGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGAGCTCTCGGAATTCTaGCTGAGTGACAGGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: RSLARPVACCSEQPLTGCELSEF*LSDRLI Trigger: TATCAGCCTGTCACTCAGCAAGAATTCCGAGAGCTC...ACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCGGGCGAGCGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
||
| CDS CCA 90 bp | GGTAGACCTTGCAAGTGTTGTTTCGGACTCGCAGTTGCCGCACTCTaGGGATGCCGAGAAGAACGTTCTCGTAGTAGATGCGGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRPCKCCFGLAVAAL*GCREERSRSRCGCC Trigger: ACAGCAGCCGCATCTACTACGAGAACGTTCTTCTCGGCATCCCCAGAGTGCGGCAACTGCGAGTCCGAAACAACACTTGCAAGGTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
||
| CDS-3UTR CAA 90 bp | CGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCCTGTACAGCTGTTTGTaGCCATACCACGAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPVACCSEQPLTGCVVVCLYSCL*PYHESQ Trigger: CTGGGACTCGTGGTATGGCAACAAACAGCTGTACAG...GCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS GCA 90 bp | CCTTGCAAGTGTTGTTTCGGACTCGCAGTTGCCGCACTCTGGGGATaGCGAGAAGAACGTTCTCGTAGTAGATGCGGCTGCTGTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PCKCCFGLAVAALWG*REERSRSRCGCCSS Trigger: TGAAGAACAGCAGCCGCATCTACTACGAGAACGTTCTTCTCGGCATCCCCAGAGTGCGGCAACTGCGAGTCCGAAACAACACTTGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CCA 90 bp | TATATATCCTCCATCTCGGTATACGCCAACAAACCCCCAGTGCCATaGGGCAGTGCGGGAAGAAGGTGTGTGCGTCCATTCTGGATTGCG | + |
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Preference number: 5 (lower is better) Translates to: YISSISVYANKPPVP*GSAGRRCVRPFWIA Trigger: CGCAATCCAGAATGGACGCACACACCTTCTTCCCGCACTGCCCCATGGCACTGGGGGTTTGTTGGCGTATACCGAGATGGAGGATATATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS-3UTR CAA 90 bp | CCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCTGCAGCGGGAGAGTGTaGATGACAGCTGCGACATTG | + |
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Preference number: 5 (lower is better) Translates to: PVACCSEQPLTGCVVVCFCSGRV*MTAATL Trigger: CAATGTCGCAGCTGTCATCAACACTCTCCCGCTGCA...GAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS GCA 90 bp | GTTGCCGCACTCTGGGGATGCCGAGAAGAACGTTCTCGTAGTAGATaGGGCTGCTGTTCTTCACACTGTACAGCTGTTTGTTGCCATACC | + |
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Preference number: 5 (lower is better) Translates to: VAALWGCREERSRSR*GCCSSHCTAVCCHT Trigger: GGTATGGCAACAAACAGCTGTACAGTGTGAAGAACAGCAGCCGCATCTACTACGAGAACGTTCTTCTCGGCATCCCCAGAGTGCGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS GCA 90 bp | GCACTCTGGGGATGCCGAGAAGAACGTTCTCGTAGTAGATGCGGCTaGTGTTCTTCACACTGTACAGCTGTTTGTTGCCATACCACGAGT | + |
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Preference number: 5 (lower is better) Translates to: ALWGCREERSRSRCG*CSSHCTAVCCHTTS Trigger: ACTCGTGGTATGGCAACAAACAGCTGTACAGTGTGAAGAACAGCAGCCGCATCTACTACGAGAACGTTCTTCTCGGCATCCCCAGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS-3UTR CAA 90 bp | CGTGCGCCACCACTGCCTGGCTGGCTTTCTCTTAAGCATGTATATGTGTATAGCCTGTACAGCTGTTTGTaGCCATACCACGAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RAPPLPGWLSLKHVYVYSLYSCL*PYHESQ Trigger: CTGGGACTCGTGGTATGGCAACAAACAGCTGTACAG...GCTATACACATATACATGCTTAAGAGAAAGCCAGCCAGGCAGTGGTGGCGCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | CGCCCAGTTGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCCATTCTGGATTGCGTTaGAGGCCAAAATCAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RPVACCSEQPLTGCVVVCHSGLR*RPKSEK Trigger: CTTCTCTGATTTTGGCCTCAAACGCAATCCAGAATG...GCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCAACTGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS TCA 90 bp | GGGCAGTGCGGGAAGAAGGTGTGTGCGTCCATTCTGGATTGCGTTTaGGGCCAAAATCAGAGAAGTCTTCGTTTTCCACTGTGTACTTGC | + |
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Preference number: 5 (lower is better) Translates to: GQCGKKVCASILDCV*GQNQRSLRFPLCTC Trigger: GCAAGTACACAGTGGAAAACGAAGACTTCTCTGATTTTGGCCTCAAACGCAATCCAGAATGGACGCACACACCTTCTTCCCGCACTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS-3UTR CAA 90 bp | TGCTTGCTGTTCAGAGCAGCCGCTCACAGGATGTGTAGTGGTATGCTTCTTGTCAATGCAGGTCATGTTTaGAAGTCCCTCCTCGGTACC | + |
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Preference number: 5 (lower is better) Translates to: CLLFRAAAHRMCSGMLLVNAGHV*KSLLGT Trigger: GGTACCGAGGAGGGACTTCAAAACATGACCTGCATT...GACAAGAAGCATACCACTACACATCCTGTGAGCGGCTGCTCTGAACAGCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS-3UTR CAA 90 bp | GGAATGCCCAGAAGGAGGATCGTGTTCCGGTGCTTGAGGAATATAAGGAATACATGCAGCGGGAGAGTGTaGATGACAGCTGCGACATTG | + |
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Preference number: 5 (lower is better) Translates to: GMPRRRIVFRCLRNIRNTCSGRV*MTAATL Trigger: CAATGTCGCAGCTGTCATCAACACTCTCCCGCTGCA...TGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTCTGGGCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | CAGGTGCAGGTACCTGTGCACACACACTTAATTTACCTCAATTCTGCCACTACCAATGCAGGTCATGTTTaGAAGTCCCTCCTCGGTACC | + |
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Preference number: 5 (lower is better) Translates to: QVQVPVHTHLIYLNSATTNAGHV*KSLLGT Trigger: GGTACCGAGGAGGGACTTCAAAACATGACCTGCATT...GGTAGTGGCAGAATTGAGGTAAATTAAGTGTGTGTGCACAGGTACCTGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | CAGGTGCAGGTACCTGTGCACACACACTTAATTTACCTCAATTCTGCCACTACCACACTGTACAGCTGTTaGTTGCCATACCACGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: QVQVPVHTHLIYLNSATTTLYSC*LPYHES Trigger: GGACTCGTGGTATGGCAACAAACAGCTGTACAGTGT...GGTAGTGGCAGAATTGAGGTAAATTAAGTGTGTGTGCACAGGTACCTGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | CAGGTGCAGGTACCTGTGCACACACACTTAATTTACCTCAATTCTGCCACTACCGAGCTCTCGGAATTCTaGCTGAGTGACAGGCTGATA | + |
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Preference number: 5 (lower is better) Translates to: QVQVPVHTHLIYLNSATTELSEF*LSDRLI Trigger: TATCAGCCTGTCACTCAGCAAGAATTCCGAGAGCTC...GGTAGTGGCAGAATTGAGGTAAATTAAGTGTGTGTGCACAGGTACCTGCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | CCAAGGGCTAGACCACTGCAGCTTTCCAGGTTTATTCAGGGGGCTTCATCTCCAATGATGCAAAACAGGTaGACATTAGCATTGTACAGG | + |
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Preference number: 5 (lower is better) Translates to: PRARPLQLSRFIQGASSPMMQNR*TLALYR Trigger: CCTGTACAATGCTAATGTCAACCTGTTTTGCATCAT...TGGAGATGAAGCCCCCTGAATAAACCTGGAAAGCTGCAGTGGTCTAGCCCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS CCA 90 bp | TCTGCTCTGCCTCTTGGATCTCACTTTCATCAAAGCCGTCTCTTCTaGCTCTCTGGGCCAAGTCAGTGGTTTGCATTTTCTTTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SALPLGSHFHQSRLF*LSGPSQWFAFSFLL Trigger: AAGAAGAAAAGAAAATGCAAACCACTGACTTGGCCCAGAGAGCCAGAAGAGACGGCTTTGATGAAAGTGAGATCCAAGAGGCAGAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS-3UTR CAA 90 bp | ATGATAGAGAATACCAAATGTCTTCCTGTGGCTTCTGCAGGTGCAGGTACCTGTCATTCTGGATTGCGTTaGAGGCCAAAATCAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: MIENTKCLPVASAGAGTCHSGLR*RPKSEK Trigger: CTTCTCTGATTTTGGCCTCAAACGCAATCCAGAATG...ACAGGTACCTGCACCTGCAGAAGCCACAGGAAGACATTTGGTATTCTCTATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | GGAATGCCCAGAAGGAGGATCGTGTTCCGGTGCTTGAGGAATATAAGGAATACAATGATGCAAAACAGGTaGACATTAGCATTGTACAGG | + |
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Preference number: 5 (lower is better) Translates to: GMPRRRIVFRCLRNIRNTMMQNR*TLALYR Trigger: CCTGTACAATGCTAATGTCAACCTGTTTTGCATCAT...TGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTCTGGGCATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | ACTTTGAGTGTTTTACAGAGTTTTATCTTCCCTAGGAATGCCCAGAAGGAGGATCCTCTGCTAATCCAGTaGTTCAGTCGAAGGTCAACA | + |
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Preference number: 5 (lower is better) Translates to: TLSVLQSFIFPRNAQKEDPLLIQ*FSRRST Trigger: TGTTGACCTTCGACTGAACAACTGGATTAGCAGAGG...ATCCTCCTTCTGGGCATTCCTAGGGAAGATAAAACTCTGTAAAACACTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014647.9 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTGCATGGCTTTTCAGATAATCTGCTAATCATTTCTCCACTTGTCAGCCCTCTGCTAATCCAGTaGTTCAGTCGAAGGTCAACA | + |
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Preference number: 5 (lower is better) Translates to: LALHGFSDNLLIISPLVSPLLIQ*FSRRST Trigger: TGTTGACCTTCGACTGAACAACTGGATTAGCAGAGG...GCTGACAAGTGGAGAAATGATTAGCAGATTATCTGAAAAGCCATGCAAAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166156.9 |
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| CDS GCA 90 bp | GAAGATAGTGATAGCAATTACGTTGTTATAGTAAATGTGCCAGTATaGAAGGAAGTAAAAGTCGGGATAGCTGTCAGTGTTTTTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: EDSDSNYVVIVNVPV*KEVKVGIAVSVFQQ Trigger: CTGCTGAAAAACACTGACAGCTATCCCGACTTTTACTTCCTTGCATACTGGCACATTTACTATAACAACGTAATTGCTATCACTATCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CCA 72 bp | TCCATCTCGGTATACGCCAACAAACCCCCAGTGCCATaGGGCAGTGCGGGAAGAAGGTGTGTGCGTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: SISVYANKPPVP*GSAGRRCVRPF Trigger: GAATGGACGCACACACCTTCTTCCCGCACTGCCCCATGGCACTGGGGGTTTGTTGGCGTATACCGAGATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS GCA 72 bp | TGTTGTTTCGGACTCGCAGTTGCCGCACTCTGGGGATaGCGAGAAGAACGTTCTCGTAGTAGATGCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CCFGLAVAALWG*REERSRSRCGC Trigger: GCAGCCGCATCTACTACGAGAACGTTCTTCTCGGCATCCCCAGAGTGCGGCAACTGCGAGTCCGAAACAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS TCA 72 bp | AACCTCCGCTTCCCTTCTGTAATGCAGGTCATGTTTTaGAGTCCCTCCTCGGTACCACCAAGTCGCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: NLRFPSVMQVMF*SPSSVPPSRLR Trigger: TCTGAGGCGACTTGGTGGTACCGAGGAGGGACTTCAAAACATGACCTGCATTACAGAAGGGAAGCGGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS TCA 72 bp | CTTCGTTTTCCACTGTGTACTTGCTGTAGCAGTCGCTaGCCAGGGACTGGAAAGCTGGGTAGACCTTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LRFPLCTCCSSR*PGTGKLGRPCK Trigger: CTTGCAAGGTCTACCCAGCTTTCCAGTCCCTGGTCAGCGACTGCTACAGCAAGTACACAGTGGAAAACGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CCA 72 bp | TGGGGCAGTGCGGGAAGAAGGTGTGTGCGTCCATTCTaGATTGCGTTTGAGGCCAAAATCAGAGAAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WGSAGRRCVRPF*IAFEAKIREVF Trigger: GAAGACTTCTCTGATTTTGGCCTCAAACGCAATCCAGAATGGACGCACACACCTTCTTCCCGCACTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CAA 72 bp | ATGCGGCTGCTGTTCTTCACACTGTACAGCTGTTTGTaGCCATACCACGAGTCCCAGTACAAGCCGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: MRLLFFTLYSCL*PYHESQYKPSM Trigger: CATCGACGGCTTGTACTGGGACTCGTGGTATGGCAACAAACAGCTGTACAGTGTGAAGAACAGCAGCCGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS GCA 72 bp | CTCTGGGGATGCCGAGAAGAACGTTCTCGTAGTAGATaGGGCTGCTGTTCTTCACACTGTACAGCTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LWGCREERSRSR*GCCSSHCTAVC Trigger: ACAAACAGCTGTACAGTGTGAAGAACAGCAGCCGCATCTACTACGAGAACGTTCTTCTCGGCATCCCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS GCA 72 bp | GGATGCCGAGAAGAACGTTCTCGTAGTAGATGCGGCTaGTGTTCTTCACACTGTACAGCTGTTTGTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GCREERSRSRCG*CSSHCTAVCCH Trigger: ATGGCAACAAACAGCTGTACAGTGTGAAGAACAGCAGCCGCATCTACTACGAGAACGTTCTTCTCGGCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CAA 90 bp | CCCGTCGCAGGGAACTCTGCCAGCAGCCTGATGATGCAAAACAGGTaGACATTAGCATTGTACAGGGAGAAATCAATAAAAACAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PVAGNSASSLMMQNR*TLALYREKSIKTAL Trigger: CAGGGCTGTTTTTATTGATTTCTCCCTGTACAATGCTAATGTCAACCTGTTTTGCATCATCAGGCTGCTGGCAGAGTTCCCTGCGACGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS TCA 72 bp | GGGAAGAAGGTGTGTGCGTCCATTCTGGATTGCGTTTaGGGCCAAAATCAGAGAAGTCTTCGTTTTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: GKKVCASILDCV*GQNQRSLRFPL Trigger: CAGTGGAAAACGAAGACTTCTCTGATTTTGGCCTCAAACGCAATCCAGAATGGACGCACACACCTTCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CCA 72 bp | CCTCTTGGATCTCACTTTCATCAAAGCCGTCTCTTCTaGCTCTCTGGGCCAAGTCAGTGGTTTGCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PLGSHFHQSRLF*LSGPSQWFAFS Trigger: AGAAAATGCAAACCACTGACTTGGCCCAGAGAGCCAGAAGAGACGGCTTTGATGAAAGTGAGATCCAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CAA 72 bp | CGGGAAGAAGGTGTGTGCGTCCATTCTGGATTGCGTTaGAGGCCAAAATCAGAGAAGTCTTCGTTTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: REEGVCVHSGLR*RPKSEKSSFST Trigger: AGTGGAAAACGAAGACTTCTCTGATTTTGGCCTCAAACGCAATCCAGAATGGACGCACACACCTTCTTCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CAA 72 bp | GCCGTCTCTTCTGGCTCTCTGGGCCAAGTCAGTGGTTaGCATTTTCTTTTCTTCTTTAGCTTGAGCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: AVSSGSLGQVSG*HFLFFFSLSFL Trigger: AAGAAAGCTCAAGCTAAAGAAGAAAAGAAAATGCAAACCACTGACTTGGCCCAGAGAGCCAGAAGAGACGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS GCA 72 bp | ATGTCCTTCATGCAGCGGGAGAGTGTTGATGACAGCTaGGACATTGTCTCATTGAAGCTTATGAACTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: MSFMQRESVDDS*DIVSLKLMNLN Trigger: ATTCAAGTTCATAAGCTTCAATGAGACAATGTCGCAGCTGTCATCAACACTCTCCCGCTGCATGAAGGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CAA 72 bp | TCAATAAAAACAGCCCTGGTGCCTCTGCTAATCCAGTaGTTCAGTCGAAGGTCAACAAATTTGGCTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: SIKTALVPLLIQ*FSRRSTNLALV Trigger: AACCAAAGCCAAATTTGTTGACCTTCGACTGAACAACTGGATTAGCAGAGGCACCAGGGCTGTTTTTATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS CAA 72 bp | GGGAACTCTGCCAGCAGCCTGATGATGCAAAACAGGTaGACATTAGCATTGTACAGGGAGAAATCAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: GNSASSLMMQNR*TLALYREKSIK Trigger: TTTTATTGATTTCTCCCTGTACAATGCTAATGTCAACCTGTTTTGCATCATCAGGCTGCTGGCAGAGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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| CDS GCA 72 bp | GATAGCAATTACGTTGTTATAGTAAATGTGCCAGTATaGAAGGAAGTAAAAGTCGGGATAGCTGTCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: DSNYVVIVNVPV*KEVKVGIAVSV Trigger: AACACTGACAGCTATCCCGACTTTTACTTCCTTGCATACTGGCACATTTACTATAACAACGTAATTGCTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014647.9 ENSMUST00000166156.9 |
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