Pregenerated sensors for PKD2L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037578Ensembl transcript IDs: ENSMUST00000042026.5
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGGCAGAAGTAAGTGCCCAGGAAGAGAGGGGCCTGGTAGGAAATaGTACTTCACAGAGCTGTGCAACTCCATAAAGAAACACCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: SGRSKCPGREGPGRK*YFTELCNSIKKHQG Trigger: CCCTTGGTGTTTCTTTATGGAGTTGCACAGCTCTGTGAAGTAGCATTTCCTACCAGGCCCCTCTCTTCCTGGGCACTTACTTCTGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR TCA 90 bp | TCGCTGGAACATAAGAACCAGAAGGCAGGCTCCTCCAGAATTCACTaGCTTCACCTTTGGAGGGGGTCACTCTTAACTCCTCTGTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SLEHKNQKAGSSRIH*LHLWRGSLLTPLLE Trigger: TTCCAACAGAGGAGTTAAGAGTGACCCCCTCCAAAGGTGAAGTCAGTGAATTCTGGAGGAGCCTGCCTTCTGGTTCTTATGTTCCAGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR GCA 90 bp | CCAGGAAGAGAGGGGCCTGGTAGGAAATGCTACTTCACAGAGCTGTaGAACTCCATAAAGAAACACCAAGGGACAAGTCTAAGCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: PGREGPGRKCYFTEL*NSIKKHQGTSLSML Trigger: CAGCATGCTTAGACTTGTCCCTTGGTGTTTCTTTATGGAGTTGCACAGCTCTGTGAAGTAGCATTTCCTACCAGGCCCCTCTCTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAAGAGAGGGGCCTGGTAGGAAATGCTACTTCACAGAGCTGTGCAACTCCTCCTCCTGTCCACCCTaGACTCCCAGGGAGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGREGPGRKCYFTELCNSSSCPP*TPRELE Trigger: CTCCAGCTCCCTGGGAGTTCAGGGTGGACAGGAGGA...GGAGTTGCACAGCTCTGTGAAGTAGCATTTCCTACCAGGCCCCTCTCTTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGCACACAAAGCACAAAAACATCGGCTaGAAAGGCCAGATACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: ASYTQPCLPVADIVMHTKHKNIG*KGQIQG Trigger: CCCCTGTATCTGGCCTTTTCAGCCGATGTTTTTGTG...CTTTGTGTGCATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGCATCATGAAACATGCTaGCCTAGAAAGGATGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: KGKASYTQPCLPVADIVMHHETC*PRKDED Trigger: ATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATG...CATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGTTTTGTTTGATTCCAGGTTTGAAGTCCCCTCAGTTCCAGCTAGTCGCTCTAATCGTGGTTGTCTaGGGTCTTCCGGAGAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: FRFCLIPGLKSPQFQLVALIVVV*GLPESH Trigger: ATGACTCTCCGGAAGACCTCAGACAACCACGATTAG...AGCGACTAGCTGGAACTGAGGGGACTTCAAACCTGGAATCAAACAAAACCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGATCAATCTGGCAGAAGTAAGTaGCCAGGAAGAGAGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSYDEESQRPPHISPKDQSGRSK*PGREGP Trigger: AGGCCCCTCTCTTCCTGGGCACTTACTTCTGCCAGA...TTGATCTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR CAA 90 bp | CTGAGGTCTTCCGGAGAGTCATTCCCATCTGCTCCTTTTTCTTGTTaGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGTGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LRSSGESFPSAPFSC*LLMSINSGRSKCPG Trigger: TCCTGGGCACTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGATGGGAATGACTCTCCGGAAGACCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR TCA 72 bp | CATAAGAACCAGAAGGCAGGCTCCTCCAGAATTCACTaGCTTCACCTTTGGAGGGGGTCACTCTTAACTCCT | + |
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Preference number: 3 (lower is better) Translates to: HKNQKAGSSRIH*LHLWRGSLLTP Trigger: AGGAGTTAAGAGTGACCCCCTCCAAAGGTGAAGTCAGTGAATTCTGGAGGAGCCTGCCTTCTGGTTCTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR GCA 72 bp | CAGGGGGAACTTCATAGCAGCCATCATGAAACATGCTaGCCTAGAAAGGATGAGGATGGAGATGGAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: QGELHSSHHETC*PRKDEDGDGDE Trigger: CTCATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR GCA 72 bp | GAGGGGCCTGGTAGGAAATGCTACTTCACAGAGCTGTaGAACTCCATAAAGAAACACCAAGGGACAAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: EGPGRKCYFTEL*NSIKKHQGTSL Trigger: TAGACTTGTCCCTTGGTGTTTCTTTATGGAGTTGCACAGCTCTGTGAAGTAGCATTTCCTACCAGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR GCA 72 bp | AGTAAGTGCCCAGGAAGAGAGGGGCCTGGTAGGAAATaGTACTTCACAGAGCTGTGCAACTCCATAAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SKCPGREGPGRK*YFTELCNSIKK Trigger: TTTCTTTATGGAGTTGCACAGCTCTGTGAAGTAGCATTTCCTACCAGGCCCCTCTCTTCCTGGGCACTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR GCA 72 bp | ATACAGGGGGAACTTCATAGCAGCCATCATGAAACATaGTGCCCTAGAAAGGATGAGGATGGAGATGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: IQGELHSSHHET*CPRKDEDGDGD Trigger: ATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR CAA 90 bp | TTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGATCAATCCATCGCCCACTCTTaGGACTTCTACCTGTTAACT | + |
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Preference number: 3 (lower is better) Translates to: LSYDEESQRPPHISPKDQSIAHS*DFYLLT Trigger: AGTTAACAGGTAGAAGTCCAAAGAGTGGGCGATGGA...TTGATCTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR CAA 90 bp | TCACATTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGTCCTTCAGGTTTTGTTaGATTCCAGGTTTGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: SHCPMTKRARDHHILVQKSFRFC*IPGLKS Trigger: GGACTTCAAACCTGGAATCAAACAAAACCTGAAGGA...CTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR-3UTR CAA 90 bp | GGTTTTCTAAAGAATTTTATTGCTAATCACCTTGGAACCTCACATTGTCCTATGTGTTTGATTCCAGGTTaGAAGTCCCCTCAGTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: GFLKNFIANHLGTSHCPMCLIPG*KSPQFQ Trigger: CTGGAACTGAGGGGACTTCAAACCTGGAATCAAACA...CATAGGACAATGTGAGGTTCCAAGGTGATTAGCAATAAAATTCTTTAGAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGAGAGGGGCCTGGTAGGAAATGCTACTTCACAGAGCTGTGCAACTCCCGCGCCCAATTCGCCTaGGGGGCTGTGTCCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: PGREGPGRKCYFTELCNSRAQFA*GAVSNR Trigger: TCTGTTGGACACAGCCCCCCAGGCGAATTGGGCGCG...GGAGTTGCACAGCTCTGTGAAGTAGCATTTCCTACCAGGCCCCTCTCTTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | AGCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATCCCCGCTGTAGCTTGTaGGCCTGCCCCAGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SSHHETCCPRKDEDGDGDPRCSL*ACPSGR Trigger: CCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGGG...ATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGGGAGGGCCTCTGCACTaGCTTGTCGGGATCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KGKASYTQPCLPVADIVMGGPLH*LVGILE Trigger: TTCCAGGATCCCGACAAGCCAGTGCAGAGGCCCTCC...CATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGAGAGGGGCCTGGTAGGAAATGCTACTTCACAGAGCTGTGCAACTCCTCTGCCAGGATGGGATaGTCCCTCCTGTGGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PGREGPGRKCYFTELCNSSARMG*SLLWLE Trigger: TTCCAGCCACAGGAGGGACCATCCCATCCTGGCAGA...GGAGTTGCACAGCTCTGTGAAGTAGCATTTCCTACCAGGCCCCTCTCTTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | AACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTCCCAGCTTTGTCCTCTaGCAGCCTCCGCGCCCAATT | + |
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Preference number: 4 (lower is better) Translates to: NPMRKEREGLLHTTMPASPSFVL*QPPRPI Trigger: AATTGGGCGCGGAGGCTGCCAGAGGACAAAGCTGGG...ACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGTGGTTCCCCCATTCCTaGGGAGGGAGCCAGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: AAIMKHAALERMRMEMEMWFPHS*GGSQLP Trigger: GGGGAGCTGGCTCCCTCCCCAGGAATGGGGGAACCA...CATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GTTTTGTTTGATTCCAGGTTTGAAGTCCCCTCAGTTCCAGCTAGTCGCTGGAACGTGAGCCTGCCCCAGTaGGAGGAGCCACCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VLFDSRFEVPSVPASRWNVSLPQ*EEPPSS Trigger: TGAGCTGGGTGGCTCCTCCCACTGGGGCAGGCTCAC...GTTCCAGCGACTAGCTGGAACTGAGGGGACTTCAAACCTGGAATCAAACAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GACCCCTTTTCCATCCTCCTGTCCACCCTGAACTCCCAGGGAGCTGGAGTGACATTCATGTTATTGTACTaGGTCTGCCAGAAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: DPFSILLSTLNSQGAGVTFMLLY*VCQKAR Trigger: CCTGGCCTTCTGGCAGACTCAGTACAATAACATGAA...TGTCACTCCAGCTCCCTGGGAGTTCAGGGTGGACAGGAGGATGGAAAAGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | AGCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGCGGATCTGCCAGGATaGGATGGTCCCTCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSHHETCCPRKDEDGDGDADLPG*DGPSCG Trigger: GCCACAGGAGGGACCATCCCATCCTGGCAGATCCGC...ATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GGAACCTCACATTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCAGCCCAGGATGTCCTTaGCACAGCGAGCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GTSHCPMTKRARDHHILVSPGCP*HSEPGW Trigger: CCACCCTGGCTCGCTGTGCCAAGGACATCCTGGGCT...GACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAATGTGAGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGCCACCCAGCTCATTCTaGGAATGGTATGTCCACGCT | + |
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Preference number: 4 (lower is better) Translates to: KGKASYTQPCLPVADIVMPPSSF*EWYVHA Trigger: AGCGTGGACATACCATTCCCAGAATGAGCTGGGTGG...CATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GGCCAGATACAGGGGGAACTTCATAGCAGCCATCATGAAACATGCTGCCCTAGAGGTCCCTCCTGTGGCTaGAAACTCTACCACCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GQIQGELHSSHHETCCPRGPSCG*KLYHQS Trigger: AGACTGGTGGTAGAGTTTCCAGCCACAGGAGGGACC...TCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTGTATCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GGCCAGATACAGGGGGAACTTCATAGCAGCCATCATGAAACATGCTGCCCTAGAGTTCTCCCAAACAGCTaGTTCCCCCATTCCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GQIQGELHSSHHETCCPRVLPNS*FPHSWG Trigger: TCCCCAGGAATGGGGGAACCAGCTGTTTGGGAGAAC...TCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTGTATCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR GCA 90 bp | AACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTAGAACACACTGCAGCTaGAGAACTCTCCTTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: NPMRKEREGLLHTTMPASRTHCS*RTLLVS Trigger: GCTCACAAGGAGAGTTCTGCAGCTGCAGTGTGTTCT...ACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR GCA 90 bp | GCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGCACACAAAGCCTTCCAGAACACACTaGAGCTGCAGAACTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: ASYTQPCLPVADIVMHTKPSRTH*SCRTLL Trigger: AAGGAGAGTTCTGCAGCTGCAGTGTGTTCTGGAAGG...CTTTGTGTGCATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGGGATGGTCCCTCCTGTaGCTGGAAACTCTACCACCA | + |
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Preference number: 4 (lower is better) Translates to: AAIMKHAALERMRMEMEMGWSLL*LETLPP Trigger: TGGTGGTAGAGTTTCCAGCCACAGGAGGGACCATCC...CATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGCCCTCAGGGTGGTCTTaGCATAAAGCTCCCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: AAIMKHAALERMRMEMEMPSGWS*HKAPCS Trigger: AGAACAGGGAGCTTTATGTCAAGACCACCCTGAGGG...CATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | TCTTTTACAGGGAAACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACTCCAGGAGTGGGCCCTaGGCAAAATCCCAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFTGKPHEERKGRPPTHNSRSGP*AKSQKS Trigger: AGACTTCTGGGATTTTGCTCAGGGCCCACTCCTGGA...GTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTTTCCCTGTAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | TTCAGGTTTTGTTTGATTCCAGGTTTGAAGTCCCCTCAGTTCCAGCTAGTCGCTGGTCCAAAGGGGAGCTaGTCTTCTTTGTCCGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: FRFCLIPGLKSPQFQLVAGPKGS*SSLSGE Trigger: CTCGCCGGACAAAGAAGATCAGCTCCCCTTTGGACC...AGCGACTAGCTGGAACTGAGGGGACTTCAAACCTGGAATCAAACAAAACCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGATGTGGTCCCCATCCTaGTCAAACCTGGTGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: AAIMKHAALERMRMEMEMMWSPS*SNLVKA Trigger: TGCCTTCACCAGGTTTGATCAGGATGGGGACCACAT...CATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR GCA 90 bp | AACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTTACGTGTCTGGCTGTTaGAGAAGCTTTCCCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: NPMRKEREGLLHTTMPASYVSGC*RSFPIS Trigger: ACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTA...ACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | TCGTGGTTGTCTGAGGTCTTCCGGAGAGTCATTCCCATCTGCTCCTTTTTCTTGCGAAGCCGATGCAGGTaGATTTCCAGGATTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SWLSEVFRRVIPICSFFLRSRCR*ISRISS Trigger: GGAGGAAATCCTGGAAATCCACCTGCATCGGCTTCG...CAAGAAAAAGGAGCAGATGGGAATGACTCTCCGGAAGACCTCAGACAACCACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GGCCAGATACAGGGGGAACTTCATAGCAGCCATCATGAAACATGCTGCCCTAGAGGCCCAGGATTCTGTTaGCATTGTCGATGGCATTGT | + |
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Preference number: 4 (lower is better) Translates to: GQIQGELHSSHHETCCPRGPGFC*HCRWHC Trigger: ACAATGCCATCGACAATGCCAACAGAATCCTGGGCC...TCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTGTATCTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GAAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGTGAAATCTTCAAACTaGATCTCTGGTTCCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: EREGLLHTTMPASGRYRDVKSSN*ISGSPP Trigger: GGGTGGGGAACCAGAGATCCAGTTTGAAGATTTCAC...ATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GGCCAGATACAGGGGGAACTTCATAGCAGCCATCATGAAACATGCTGCCCTAGATCTTCTCCTGGCATCTaGCTTCTGGCTTTTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GQIQGELHSSHHETCCPRSSPGI*LLAFWV Trigger: AACCCAAAAAGCCAGAAGTCAGATGCCAGGAGAAGA...TCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTGTATCTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | TCACATTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGTGTTCCAGACGCTGCTaGGGTAGCGAAGCCGATGCA | + |
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Preference number: 4 (lower is better) Translates to: SHCPMTKRARDHHILVQKCSRRC*GSEADA Trigger: TGCATCGGCTTCGCTACCTCAGCAGCGTCTGGAACA...CTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAATGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR GCA 90 bp | AGCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATTTAACTGTGCGGATCTaGCAGGATGGGATGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SSHHETCCPRKDEDGDGDLTVRI*QDGMVP Trigger: AGGGACCATCCCATCCTGGCAGATCCGCACAGTTAA...ATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR GCA 90 bp | GGAACCTCACATTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCTGCCGCATCTGTTCCTaGTCCTCCTCATCCAGTATG | + |
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Preference number: 4 (lower is better) Translates to: GTSHCPMTKRARDHHILVCRICS*SSSSSM Trigger: CATACTGGATGAGGAGGAGCAGGAACAGATGCGGCA...GACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAATGTGAGGTTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTACAGGGAAACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACATGCTCCGACAGATATaGAGACAGCAGCTGGACACC | + |
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Preference number: 4 (lower is better) Translates to: SFTGKPHEERKGRPPTHNMLRQI*RQQLDT Trigger: GGTGTCCAGCTGCTGTCTCCATATCTGTCGGAGCAT...GTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTTTCCCTGTAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GTTTTGTTTGATTCCAGGTTTGAAGTCCCCTCAGTTCCAGCTAGTCGCTGGAACCAAACTGTCCAGGAGTaGGCCCTGAGCAAAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLFDSRFEVPSVPASRWNQTVQE*ALSKIP Trigger: TGGGATTTTGCTCAGGGCCCACTCCTGGACAGTTTG...GTTCCAGCGACTAGCTGGAACTGAGGGGACTTCAAACCTGGAATCAAACAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGGTCTGCATACGTGTCTaGCTGTTGCAGAAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAIMKHAALERMRMEMEMVCIRV*LLQKLS Trigger: GGAAAGCTTCTGCAACAGCCAGACACGTATGCAGAC...CATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GGAACCTCACATTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCAGTCTGACATGCTGCTaGTGGTTTGGAAGGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GTSHCPMTKRARDHHILVSLTCC*WFGRRL Trigger: GAGTCTCCTTCCAAACCATCAGCAGCATGTCAGACT...GACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAATGTGAGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGCAGCATCTTCAGCTTTaGGCCTACAGCATCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAIMKHAALERMRMEMEMQHLQL*AYSINL Trigger: CAGATTGATGCTGTAGGCTCAAAGCTGAAGATGCTG...CATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | CAGGGGGAACTTCATAGCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGCTGGCATCTGACTTCTaGCTTTTTGGGTTGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGELHSSHHETCCPRKDELASDF*LFGLSL Trigger: GAGACTCAACCCAAAAAGCCAGAAGTCAGATGCCAG...CTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GTTTTGTTTGATTCCAGGTTTGAAGTCCCCTCAGTTCCAGCTAGTCGCTGGAACATGCTGCTGATGGTTTaGAAGGAGACTCCAGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VLFDSRFEVPSVPASRWNMLLMV*KETPES Trigger: CGACTCTGGAGTCTCCTTCCAAACCATCAGCAGCAT...GTTCCAGCGACTAGCTGGAACTGAGGGGACTTCAAACCTGGAATCAAACAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGCCCTCCTGGAGTCCTTaGAGGGCCTCTGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAPFSCLLLMSINSGRSKPSWSP*RASALA Trigger: AGCCAGTGCAGAGGCCCTCCAAGGACTCCAGGAGGG...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GTTTTGTTTGATTCCAGGTTTGAAGTCCCCTCAGTTCCAGCTAGTCGCTGGAACAGGGTTCGGAATATGTaGAAACCCACAGCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLFDSRFEVPSVPASRWNRVRNM*KPTATM Trigger: CATCGTGGCTGTGGGTTTCCACATATTCCGAACCCT...GTTCCAGCGACTAGCTGGAACTGAGGGGACTTCAAACCTGGAATCAAACAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGCACACAAAGGAATACAGAAAAGATTaGTGTTGGCATTGTAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASYTQPCLPVADIVMHTKEYRKD*CWHCRR Trigger: CCGTCTACAATGCCAACATCAATCTTTTCTGTATTC...CTTTGTGTGCATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | TCTTTTACAGGGAAACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACGCAGAACTCTCCTTGTaGGCATGTCGAATTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SFTGKPHEERKGRPPTHNAELSL*ACRILL Trigger: GAGAAGAATTCGACATGCTCACAAGGAGAGTTCTGC...GTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTTTCCCTGTAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR GCA 90 bp | AGCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATCAGGAACTCAAAGTCTaGATACGTGTCTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHHETCCPRKDEDGDGDQELKV*IRVWLL Trigger: CAACAGCCAGACACGTATGCAGACTTTGAGTTCCTG...ATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGGGTTCTCATAGTAGATaGAGGAGTGGGAGCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAPFSCLLLMSINSGRSKGSHSR*RSGSHA Trigger: GGCGTGGCTCCCACTCCTTCATCTACTATGAGAACC...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GGCCAGATACAGGGGGAACTTCATAGCAGCCATCATGAAACATGCTGCCCTAGACCACATAATAGAAGATaGAGACACAGAAGACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GQIQGELHSSHHETCCPRPHNRR*RHRRQL Trigger: AAGTTGTCTTCTGTGTCTTCATCTTCTATTATGTGG...TCTAGGGCAGCATGTTTCATGATGGCTGCTATGAAGTTCCCCCTGTATCTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGCCACGCCCCAGGCTCTaGTTGTTGTACCACTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAPFSCLLLMSINSGRSKPRPRL*LLYHFV Trigger: GACAAAGTGGTACAACAACCAGAGCCTGGGGCGTGG...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | TTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGATCAATTCAAACTGGATCTCTaGTTCCCCACCCTTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSYDEESQRPPHISPKDQFKLDL*FPTLQD Trigger: GTCCTGAAGGGTGGGGAACCAGAGATCCAGTTTGAA...TTGATCTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| 3UTR CAA 72 bp | CTTCACCTTTGGAGGGGGTCACTCTTAACTCCTCTGTaGGAATCTCACCACACAAAAATCTTCTTTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: LHLWRGSLLTPL*ESHHTKIFFPL Trigger: TAGTGGAAAGAAGATTTTTGTGTGGTGAGATTCCAACAGAGGAGTTAAGAGTGACCCCCTCCAAAGGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | TTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGATCAACTTCACAGCCCACAATaGAGAAGTCCCAGTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSYDEESQRPPHISPKDQLHSPQ*RSPSYS Trigger: TGAATAACTGGGACTTCTTCATTGTGGGCTGTGAAG...TTGATCTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | TTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGATCAAAGGATTATCCGGAACTaGGTGAAAATGCACTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSYDEESQRPPHISPKDQRIIRN*VKMHLT Trigger: CGTCAAGTGCATTTTCACTCAGTTCCGGATAATCCT...TTGATCTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR GCA 90 bp | GGTTTTCTAAAGAATTTTATTGCTAATCACCTTGGAACCTCACATTGTCCTATGCCCTTCAGGACCTTCTaGACATCAGAAACCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLKNFIANHLGTSHCPMPFRTF*TSETRS Trigger: AGAGCGGGTTTCTGATGTGCAGAAGGTCCTGAAGGG...CATAGGACAATGTGAGGTTCCAAGGTGATTAGCAATAAAATTCTTTAGAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGCTCTGTGTCTTCTCCTaGCATCTGACTTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPFSCLLLMSINSGRSKLCVFS*HLTSGF Trigger: AAAGCCAGAAGTCAGATGCCAGGAGAAGACACAGAG...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CCA 90 bp | GGTTTTCTAAAGAATTTTATTGCTAATCACCTTGGAACCTCACATTGTCCTATGGGCTTGTCGGGATCCTaGAAGATCCAAGTAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFLKNFIANHLGTSHCPMGLSGS*KIQVVA Trigger: GGCTACTACTTGGATCTTCCAGGATCCCGACAAGCC...CATAGGACAATGTGAGGTTCCAAGGTGATTAGCAATAAAATTCTTTAGAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GGTTTTCTAAAGAATTTTATTGCTAATCACCTTGGAACCTCACATTGTCCTATGTCCCGGAAGTCTTCATaGACCACACAGGAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GFLKNFIANHLGTSHCPMSRKSS*TTQESL Trigger: CAATGACTCCTGTGTGGTTCATGAAGACTTCCGGGA...CATAGGACAATGTGAGGTTCCAAGGTGATTAGCAATAAAATTCTTTAGAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GGTTTTCTAAAGAATTTTATTGCTAATCACCTTGGAACCTCACATTGTCCTATGCGAAGAAGACATAGGTaGCAAAGTACACAGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFLKNFIANHLGTSHCPMRRRHR*QSTQGP Trigger: TGGGCCCTGTGTACTTTGTCACCTATGTCTTCTTCG...CATAGGACAATGTGAGGTTCCAAGGTGATTAGCAATAAAATTCTTTAGAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR TCA 90 bp | GGTTTTCTAAAGAATTTTATTGCTAATCACCTTGGAACCTCACATTGTCCTATGAAAATCCCAGAAGTCTaGCATGCTGCTGATGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFLKNFIANHLGTSHCPMKIPEV*HAADGL Trigger: CAAACCATCAGCAGCATGTCAGACTTCTGGGATTTT...CATAGGACAATGTGAGGTTCCAAGGTGATTAGCAATAAAATTCTTTAGAAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 90 bp | TCGATAAAGACCACCCGAGTGCCCCTGTCCAGCCACAGTCCCTCCTaGAGTCCTTGGAGGGCCTCTGCACTGGCTTGTCGGGATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SIKTTRVPLSSHSPS*SPWRASALACRDPG Trigger: TCCAGGATCCCGACAAGCCAGTGCAGAGGCCCTCCAAGGACTCCAGGAGGGACTGTGGCTGGACAGGGGCACTCGGGTGGTCTTTATCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | GGGATCCTGGAAGATCCAAGTAGTAGCCACCCCCGCTGTAGCTTGTaGGCCTGCCCCAGTGGGAGGAGCCACCCAGCTCATTCTGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: GILEDPSSSHPRCSL*ACPSGRSHPAHSGN Trigger: ATTCCCAGAATGAGCTGGGTGGCTCCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGGGGTGGCTACTACTTGGATCTTCCAGGATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 90 bp | CTCCTGGAGTCCTTGGAGGGCCTCTGCACTGGCTTGTCGGGATCCTaGAAGATCCAAGTAGTAGCCACCCCCGCTGTAGCTTGTGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLESLEGLCTGLSGS*KIQVVATPAVACEP Trigger: AGGCTCACAAGCTACAGCGGGGGTGGCTACTACTTGGATCTTCCAGGATCCCGACAAGCCAGTGCAGAGGCCCTCCAAGGACTCCAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | GGGGGCTGTGTCCAACAGACCGGCCTAGGTTCTCAATCTCAGCATTaGGGGTCACCCTCTCCTCTTCCAGTCCCTGCCGCATCTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGCVQQTGLGSQSQH*GSPSPLPVPAASVP Trigger: AGGAACAGATGCGGCAGGGACTGGAAGAGGAGAGGGTGACCCTCAATGCTGAGATTGAGAACCTAGGCCGGTCTGTTGGACACAGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 90 bp | CTGGCTTTTTGGGTTGAGTCTCAGGGAGAGCCACACTGGAGACAGTaGAGATCCTCAGCGTCCTGTTCGGGGAAGGAGGGTCGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAFWVESQGEPHWRQ*RSSASCSGKEGRCR Trigger: CCTACAGCGACCCTCCTTCCCCGAACAGGACGCTGAGGATCTGCACTGTCTCCAGTGTGGCTCTCCCTGAGACTCAACCCAAAAAGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 90 bp | TCAAAATGTCCTCCCGGAAGTCTTCATGAACCACACAGGAGTCATTaGGCACGCGCAGCTGCCGCAACCTTGGGGCTCCCAGGAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKCPPGSLHEPHRSH*ARAAAATLGLPGAG Trigger: ACCTGCTCCTGGGAGCCCCAAGGTTGCGGCAGCTGCGCGTGCGCAATGACTCCTGTGTGGTTCATGAAGACTTCCGGGAGGACATTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | CGCATCTGTTCCTGCTCCTCCTCATCCAGTATGTGGTCCCCATCCTaGTCAAACCTGGTGAAGGCAGCGGTGATCTCGTGCTCCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RICSCSSSSSMWSPS*SNLVKAAVISCSSC Trigger: GCACGAGGAGCACGAGATCACCGCTGCCTTCACCAGGTTTGATCAGGATGGGGACCACATACTGGATGAGGAGGAGCAGGAACAGATGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | CCAGGAGTGGGCCCTGAGCAAAATCCCAGAAGTCTGACATGCTGCTaGTGGTTTGGAAGGAGACTCCAGAGTCGGATGGGGTGTGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGVGPEQNPRSLTCC*WFGRRLQSRMGCVG Trigger: TCCTACACACCCCATCCGACTCTGGAGTCTCCTTCCAAACCATCAGCAGCATGTCAGACTTCTGGGATTTTGCTCAGGGCCCACTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 90 bp | GCTGGACACCAGGGTTCTCTGTGTCTTCTCCTGGCATCTGACTTCTaGCTTTTTGGGTTGAGTCTCAGGGAGAGCCACACTGGAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGHQGSLCLLLASDF*LFGLSLRESHTGDS Trigger: ACTGTCTCCAGTGTGGCTCTCCCTGAGACTCAACCCAAAAAGCCAGAAGTCAGATGCCAGGAGAAGACACAGAGAACCCTGGTGTCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 90 bp | CCCCAGTTCCCTCAAGGTGCTGGTGAAATCTTCAAACTGGATCTCTaGTTCCCCACCCTTCAGGACCTTCTGCACATCAGAAACCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQFPQGAGEIFKLDL*FPTLQDLLHIRNPL Trigger: GAGCGGGTTTCTGATGTGCAGAAGGTCCTGAAGGGTGGGGAACCAGAGATCCAGTTTGAAGATTTCACCAGCACCTTGAGGGAACTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TCGTGGTTGTCTGAGGTCTTCCGGAGAGTCATTCCCATCTGCTCCTTTTTCTTGGGCCTCTGCACTGGCTaGTCGGGATCCTGGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SWLSEVFRRVIPICSFFLGLCTG*SGSWKI Trigger: GATCTTCCAGGATCCCGACAAGCCAGTGCAGAGGCC...CAAGAAAAAGGAGCAGATGGGAATGACTCTCCGGAAGACCTCAGACAACCACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | GTTCTCTGTGTCTTCTCCTGGCATCTGACTTCTGGCTTTTTGGGTTaGGTCTCAGGGAGAGCCACACTGGAGACAGTGCAGATCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLCVFSWHLTSGFLG*VSGRATLETVQILS Trigger: GCTGAGGATCTGCACTGTCTCCAGTGTGGCTCTCCCTGAGACTCAACCCAAAAAGCCAGAAGTCAGATGCCAGGAGAAGACACAGAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 90 bp | GTTATTCACATAGCGGATCAGCTTAACTGTGCGGATCTGCCAGGATaGGATGGTCCCTCCTGTGGCTGGAAACTCTACCACCAGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIHIADQLNCADLPG*DGPSCGWKLYHQSQ Trigger: CTGAGACTGGTGGTAGAGTTTCCAGCCACAGGAGGGACCATCCCATCCTGGCAGATCCGCACAGTTAAGCTGATCCGCTATGTGAATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 90 bp | CTGAGTCTGCCAGAAGGCCAGGAACTCAAAGTCTGCATACGTGTCTaGCTGTTGCAGAAGCTTTCCCATCAGTCGGTTCACTTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLPEGQELKVCIRV*LLQKLSHQSVHFQG Trigger: ACCCTGGAAGTGAACCGACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTATGCAGACTTTGAGTTCCTGGCCTTCTGGCAGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | AACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTTTCTGGCTTTTTGGGTaGAGTCTCAGGGAGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NPMRKEREGLLHTTMPASFWLFG*SLRESH Trigger: GTGGCTCTCCCTGAGACTCAACCCAAAAAGCCAGAA...ACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | CCACGAGGAACACTATGTATACCACAAGCTCCCTCAGGGTGGTCTTaGCATAAAGCTCCCTGTTCTCGGCTGTGTTCTCAGTCAGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRGTLCIPQAPSGWS*HKAPCSRLCSQSAL Trigger: CAACGCTGACTGAGAACACAGCCGAGAACAGGGAGCTTTATGTCAAGACCACCCTGAGGGAGCTTGTGGTATACATAGTGTTCCTCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 90 bp | TGCCAGAAGGCCAGGAACTCAAAGTCTGCATACGTGTCTGGCTGTTaGAGAAGCTTTCCCATCAGTCGGTTCACTTCCAGGGTTCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CQKARNSKSAYVSGC*RSFPISRFTSRVRN Trigger: ATTCCGAACCCTGGAAGTGAACCGACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTATGCAGACTTTGAGTTCCTGGCCTTCTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 90 bp | AAATCTTCAAACTGGATCTCTGGTTCCCCACCCTTCAGGACCTTCTaGACATCAGAAACCCGCTCTTTCCTCAGGCGCAGCCTTAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSSNWISGSPPFRTF*TSETRSFLRRSLSR Trigger: CCTACTAAGGCTGCGCCTGAGGAAAGAGCGGGTTTCTGATGTGCAGAAGGTCCTGAAGGGTGGGGAACCAGAGATCCAGTTTGAAGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | GACCCCTTTTCCATCCTCCTGTCCACCCTGAACTCCCAGGGAGCTGGAGTGACAAGCTGTGTCATGGTCTaGTTGAAGCTGATATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: DPFSILLSTLNSQGAGVTSCVMV*LKLIYL Trigger: CAAGTATATCAGCTTCAACAAGACCATGACACAGCT...TGTCACTCCAGCTCCCTGGGAGTTCAGGGTGGACAGGAGGATGGAAAAGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTGGCAGATATCGTGATGTCGGAGTATGTGTCGTaGATGATGGCCAGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: KGKASYTQPCLPVADIVMSEYVS*MMARNM Trigger: CATGTTCCTGGCCATCATCAACGACACATACTCCGA...CATCACGATATCTGCCACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | AACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACCATGCCTGCCAGTTTCTCAATCTCAGCATaGAGGGTCACCCTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPMRKEREGLLHTTMPASFSISA*RVTLSS Trigger: AGAGGAGAGGGTGACCCTCAATGCTGAGATTGAGAA...ACTGGCAGGCATGGTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | GCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGCCCAGGCTCTGGTTGTaGTACCACTTTGTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AAIMKHAALERMRMEMEMPRLWL*YHFVQY Trigger: GTACTGGACAAAGTGGTACAACAACCAGAGCCTGGG...CATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGGCAGCTGCCGCAACCTaGGGGCTCCCAGGAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPFSCLLLMSINSGRSKAAAAT*GLPGAG Trigger: ACCTGCTCCTGGGAGCCCCAAGGTTGCGGCAGCTGC...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | CCAGGAACATGTTCAGGAGCACGAAGAAGACGAAGAAGACATAGGTaGCAAAGTACACAGGGCCCAGGATTCTGTTGGCATTGTCGATGG | + |
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Preference number: 5 (lower is better) Translates to: PGTCSGARRRRRRHR*QSTQGPGFCWHCRW Trigger: CCATCGACAATGCCAACAGAATCCTGGGCCCTGTGTACTTTGTCACCTATGTCTTCTTCGTCTTCTTCGTGCTCCTGAACATGTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | GTTTTGTTTGATTCCAGGTTTGAAGTCCCCTCAGTTCCAGCTAGTCGCTGGAACCATGCTGCTGATGGTTaGGAAGGAGACTCCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: VLFDSRFEVPSVPASRWNHAADG*EGDSRV Trigger: GACTCTGGAGTCTCCTTCCAAACCATCAGCAGCATG...GTTCCAGCGACTAGCTGGAACTGAGGGGACTTCAAACCTGGAATCAAACAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGACCACACAGGAGTCATaGCGCACGCGCAGCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: SAPFSCLLLMSINSGRSKTTQES*RTRSCR Trigger: GCGGCAGCTGCGCGTGCGCAATGACTCCTGTGTGGT...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TTGTCCTATGACGAAGAGAGCCAGAGACCACCACATATTAGTCCAAAAGATCAATCCAGAAACCCAGCTTaGTCCTCTGGCAGCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: LSYDEESQRPPHISPKDQSRNPA*SSGSLR Trigger: GCGGAGGCTGCCAGAGGACAAAGCTGGGTTTCTGGA...TTGATCTTTTGGACTAATATGTGGTGGTCTCTGGCTCTCTTCGTCATAGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 90 bp | CATGTTATTGTACTGAGTCTGCCAGAAGGCCAGGAACTCAAAGTCTaGATACGTGTCTGGCTGTTGCAGAAGCTTTCCCATCAGTCGGTT | + |
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Preference number: 5 (lower is better) Translates to: HVIVLSLPEGQELKV*IRVWLLQKLSHQSV Trigger: AACCGACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTATGCAGACTTTGAGTTCCTGGCCTTCTGGCAGACTCAGTACAATAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 90 bp | CTTAACTGTGCGGATCTGCCAGGATGGGATGGTCCCTCCTGTGGCTaGAAACTCTACCACCAGTCTCAGAATACAGAAAAGATTGATGTT | + |
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Preference number: 5 (lower is better) Translates to: LNCADLPGWDGPSCG*KLYHQSQNTEKIDV Trigger: AACATCAATCTTTTCTGTATTCTGAGACTGGTGGTAGAGTTTCCAGCCACAGGAGGGACCATCCCATCCTGGCAGATCCGCACAGTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | AGCAGCCATCATGAAACATGCTGCCCTAGAAAGGATGAGGATGGAGATGGAGATGGTTGTTGTACCACTTaGTCCAGTACAAACTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SSHHETCCPRKDEDGDGDGCCTT*SSTNCP Trigger: TGGACAGTTTGTACTGGACAAAGTGGTACAACAACC...ATCTCCATCTCCATCCTCATCCTTTCTAGGGCAGCATGTTTCATGATGGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGCGCCCCAGGCTCTGGTaGTTGTACCACTTTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SAPFSCLLLMSINSGRSKRPRLW*LYHFVQ Trigger: CTGGACAAAGTGGTACAACAACCAGAGCCTGGGGCG...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTACAGGGAAACCCCATGAGGAAAGAAAGGGAAGGCCTCCTACACACAACGCTAAAGTTTTCCACTaGGGTCCCAAAAAGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: SFTGKPHEERKGRPPTHNAKVFH*GPKKQV Trigger: TACCTGCTTTTTGGGACCCAAGTGGAAAACTTTAGC...GTTGTGTGTAGGAGGCCTTCCCTTTCTTTCCTCATGGGGTTTCCCTGTAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 90 bp | TTGATCCAAGCAAAGAAAAGGTTGACCGCGTTCATGTTATTGTACTaGGTCTGCCAGAAGGCCAGGAACTCAAAGTCTGCATACGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LIQAKKRLTAFMLLY*VCQKARNSKSAYVS Trigger: AGACACGTATGCAGACTTTGAGTTCCTGGCCTTCTGGCAGACTCAGTACAATAACATGAACGCGGTCAACCTTTTCTTTGCTTGGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGGGGCCCAGGATTCTGTaGGCATTGTCGATGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: SAPFSCLLLMSINSGRSKGPRIL*ALSMAL Trigger: CAATGCCATCGACAATGCCAACAGAATCCTGGGCCC...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | GGTTTTCTAAAGAATTTTATTGCTAATCACCTTGGAACCTCACATTGTCCTATGCCAGCATCTTCAGCTTaGAGCCTACAGCATCAATCT | + |
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Preference number: 5 (lower is better) Translates to: GFLKNFIANHLGTSHCPMPASSA*SLQHQS Trigger: AGATTGATGCTGTAGGCTCAAAGCTGAAGATGCTGG...CATAGGACAATGTGAGGTTCCAAGGTGATTAGCAATAAAATTCTTTAGAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTCCTTTTTCTTGTTTGTTGTTGATGTCAATCAACTCTGGCAGAAGTAAGTGTGTCATGGTCTTGTaGAAGCTGATATACTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: SAPFSCLLLMSINSGRSKCVMVL*KLIYLN Trigger: ATTCAAGTATATCAGCTTCAACAAGACCATGACACA...CTTACTTCTGCCAGAGTTGATTGACATCAACAACAAACAAGAAAAAGGAGCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 72 bp | CCTCCCGGAAGTCTTCATGAACCACACAGGAGTCATTaGGCACGCGCAGCTGCCGCAACCTTGGGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PPGSLHEPHRSH*ARAAAATLGLP Trigger: TGGGAGCCCCAAGGTTGCGGCAGCTGCGCGTGCGCAATGACTCCTGTGTGGTTCATGAAGACTTCCGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 72 bp | GAAGATCCAAGTAGTAGCCACCCCCGCTGTAGCTTGTaGGCCTGCCCCAGTGGGAGGAGCCACCCAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: EDPSSSHPRCSL*ACPSGRSHPAH Trigger: ATGAGCTGGGTGGCTCCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGGGGTGGCTACTACTTGGATCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 72 bp | ACCTTGGGGCTCCCAGGAGCAGGTTCTCATAGTAGATaGAGGAGTGGGAGCCACGCCCCAGGCTCTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: TLGLPGAGSHSR*RSGSHAPGSGC Trigger: ACAACCAGAGCCTGGGGCGTGGCTCCCACTCCTTCATCTACTATGAGAACCTGCTCCTGGGAGCCCCAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 72 bp | TGGGTTGAGTCTCAGGGAGAGCCACACTGGAGACAGTaGAGATCCTCAGCGTCCTGTTCGGGGAAGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: WVESQGEPHWRQ*RSSASCSGKEG Trigger: ACCCTCCTTCCCCGAACAGGACGCTGAGGATCTGCACTGTCTCCAGTGTGGCTCTCCCTGAGACTCAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 72 bp | TCCTTGGAGGGCCTCTGCACTGGCTTGTCGGGATCCTaGAAGATCCAAGTAGTAGCCACCCCCGCTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLEGLCTGLSGS*KIQVVATPAVA Trigger: AGCTACAGCGGGGGTGGCTACTACTTGGATCTTCCAGGATCCCGACAAGCCAGTGCAGAGGCCCTCCAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 72 bp | GTCCAACAGACCGGCCTAGGTTCTCAATCTCAGCATTaGGGGTCACCCTCTCCTCTTCCAGTCCCTGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: VQQTGLGSQSQH*GSPSPLPVPAA Trigger: TGCGGCAGGGACTGGAAGAGGAGAGGGTGACCCTCAATGCTGAGATTGAGAACCTAGGCCGGTCTGTTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 72 bp | TCCTGCTCCTCCTCATCCAGTATGTGGTCCCCATCCTaGTCAAACCTGGTGAAGGCAGCGGTGATCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: SCSSSSSMWSPS*SNLVKAAVISC Trigger: GCACGAGATCACCGCTGCCTTCACCAGGTTTGATCAGGATGGGGACCACATACTGGATGAGGAGGAGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 72 bp | AACTGGATCTCTGGTTCCCCACCCTTCAGGACCTTCTaGACATCAGAAACCCGCTCTTTCCTCAGGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NWISGSPPFRTF*TSETRSFLRRS Trigger: GCTGCGCCTGAGGAAAGAGCGGGTTTCTGATGTGCAGAAGGTCCTGAAGGGTGGGGAACCAGAGATCCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 72 bp | AACCTGGTGAAGGCAGCGGTGATCTCGTGCTCCTCGTaGCCCAGTTCCCTCAAGGTGCTGGTGAAATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NLVKAAVISCSS*PSSLKVLVKSS Trigger: TGAAGATTTCACCAGCACCTTGAGGGAACTGGGGCACGAGGAGCACGAGATCACCGCTGCCTTCACCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 72 bp | ATAGCGGATCAGCTTAACTGTGCGGATCTGCCAGGATaGGATGGTCCCTCCTGTGGCTGGAAACTCTACCAC | + |
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Preference number: 6 (lower is better) Translates to: IADQLNCADLPG*DGPSCGWKLYH Trigger: GTGGTAGAGTTTCCAGCCACAGGAGGGACCATCCCATCCTGGCAGATCCGCACAGTTAAGCTGATCCGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 72 bp | CCAGCCAGCTCCTCCTTGACCTCGGAGTATGTGTCGTaGATGATGGCCAGGAACATGTTCAGGAGCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: PASSSLTSEYVS*MMARNMFRSTK Trigger: CTTCGTGCTCCTGAACATGTTCCTGGCCATCATCAACGACACATACTCCGAGGTCAAGGAGGAGCTGGCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 90 bp | TCCTTCTGGCCAGCCAGCTCCTCCTTGACCTCGGAGTATGTGTCGTaGATGATGGCCAGGAACATGTTCAGGAGCACGAAGAAGACGAAG | + |
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Preference number: 6 (lower is better) Translates to: SFWPASSSLTSEYVS*MMARNMFRSTKKTK Trigger: CTTCGTCTTCTTCGTGCTCCTGAACATGTTCCTGGCCATCATCAACGACACATACTCCGAGGTCAAGGAGGAGCTGGCTGGCCAGAAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 72 bp | GTCTTCTCCTGGCATCTGACTTCTGGCTTTTTGGGTTaGGTCTCAGGGAGAGCCACACTGGAGACAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VFSWHLTSGFLG*VSGRATLETVQ Trigger: CTGCACTGTCTCCAGTGTGGCTCTCCCTGAGACTCAACCCAAAAAGCCAGAAGTCAGATGCCAGGAGAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 72 bp | CACCCAGCTCATTCTGGGAATGGTATGTCCACGCTGTaGCGTTCTGAGGTCCAAAGGGGAGCTGATCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HPAHSGNGMSTL*RSEVQRGADLL Trigger: AAGAAGATCAGCTCCCCTTTGGACCTCAGAACGGCACAGCGTGGACATACCATTCCCAGAATGAGCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 72 bp | ATGAAGGAGTGGGAGCCACGCCCCAGGCTCTGGTTGTaGTACCACTTTGTCCAGTACAAACTGTCCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: MKEWEPRPRLWL*YHFVQYKLSRS Trigger: ACTCCTGGACAGTTTGTACTGGACAAAGTGGTACAACAACCAGAGCCTGGGGCGTGGCTCCCACTCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 90 bp | GGTTCTCTGTGTCTTCTCCTGGCATCTGACTTCTGGCTTTTTGGGTaGAGTCTCAGGGAGAGCCACACTGGAGACAGTGCAGATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GSLCLLLASDFWLFG*SLRESHTGDSADPQ Trigger: CTGAGGATCTGCACTGTCTCCAGTGTGGCTCTCCCTGAGACTCAACCCAAAAAGCCAGAAGTCAGATGCCAGGAGAAGACACAGAGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 90 bp | CTGCCAGAAGGCCAGGAACTCAAAGTCTGCATACGTGTCTGGCTGTaGCAGAAGCTTTCCCATCAGTCGGTTCACTTCCAGGGTTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: LPEGQELKVCIRVWL*QKLSHQSVHFQGSE Trigger: TTCCGAACCCTGGAAGTGAACCGACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTATGCAGACTTTGAGTTCCTGGCCTTCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS GCA 72 bp | GCCAGGAACTCAAAGTCTGCATACGTGTCTGGCTGTTaGAGAAGCTTTCCCATCAGTCGGTTCACTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ARNSKSAYVSGC*RSFPISRFTSR Trigger: CCTGGAAGTGAACCGACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTATGCAGACTTTGAGTTCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 72 bp | CCAGAAGGCCAGGAACTCAAAGTCTGCATACGTGTCTaGCTGTTGCAGAAGCTTTCCCATCAGTCGGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PEGQELKVCIRV*LLQKLSHQSVH Trigger: GTGAACCGACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTATGCAGACTTTGAGTTCCTGGCCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 72 bp | GGCCAGGAACTCAAAGTCTGCATACGTGTCTGGCTGTaGCAGAAGCTTTCCCATCAGTCGGTTCACTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQELKVCIRVWL*QKLSHQSVHFQ Trigger: CTGGAAGTGAACCGACTGATGGGAAAGCTTCTGCAACAGCCAGACACGTATGCAGACTTTGAGTTCCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CCA 72 bp | CCTCAAGGTGCTGGTGAAATCTTCAAACTGGATCTCTaGTTCCCCACCCTTCAGGACCTTCTGCACATCAGA | + |
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Preference number: 6 (lower is better) Translates to: PQGAGEIFKLDL*FPTLQDLLHIR Trigger: TCTGATGTGCAGAAGGTCCTGAAGGGTGGGGAACCAGAGATCCAGTTTGAAGATTTCACCAGCACCTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 72 bp | ACACTATGTATACCACAAGCTCCCTCAGGGTGGTCTTaGCATAAAGCTCCCTGTTCTCGGCTGTGTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TLCIPQAPSGWS*HKAPCSRLCSQ Trigger: CTGAGAACACAGCCGAGAACAGGGAGCTTTATGTCAAGACCACCCTGAGGGAGCTTGTGGTATACATAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS TCA 72 bp | TGTTCAGGAGCACGAAGAAGACGAAGAAGACATAGGTaGCAAAGTACACAGGGCCCAGGATTCTGTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: CSGARRRRRRHR*QSTQGPGFCWH Trigger: ATGCCAACAGAATCCTGGGCCCTGTGTACTTTGTCACCTATGTCTTCTTCGTCTTCTTCGTGCTCCTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 90 bp | TTGGCACAGCGAGCCAGGGTGGAGGAGAGCTGTGTCATGGTCTTGTaGAAGCTGATATACTTGAATATCTTGATCCAAGCAAAGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LAQRARVEESCVMVL*KLIYLNILIQAKKR Trigger: CCTTTTCTTTGCTTGGATCAAGATATTCAAGTATATCAGCTTCAACAAGACCATGACACAGCTCTCCTCCACCCTGGCTCGCTGTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 90 bp | TCCTTGGCACAGCGAGCCAGGGTGGAGGAGAGCTGTGTCATGGTCTaGTTGAAGCTGATATACTTGAATATCTTGATCCAAGCAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SLAQRARVEESCVMV*LKLIYLNILIQAKK Trigger: TTTCTTTGCTTGGATCAAGATATTCAAGTATATCAGCTTCAACAAGACCATGACACAGCTCTCCTCCACCCTGGCTCGCTGTGCCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 72 bp | CGAGCCAGGGTGGAGGAGAGCTGTGTCATGGTCTTGTaGAAGCTGATATACTTGAATATCTTGATCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RARVEESCVMVL*KLIYLNILIQA Trigger: TGCTTGGATCAAGATATTCAAGTATATCAGCTTCAACAAGACCATGACACAGCTCTCCTCCACCCTGGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 72 bp | CAGCGAGCCAGGGTGGAGGAGAGCTGTGTCATGGTCTaGTTGAAGCTGATATACTTGAATATCTTGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: QRARVEESCVMV*LKLIYLNILIQ Trigger: TTGGATCAAGATATTCAAGTATATCAGCTTCAACAAGACCATGACACAGCTCTCCTCCACCCTGGCTCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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| CDS CAA 90 bp | GAGAGCTGTGTCATGGTCTTGTTGAAGCTGATATACTTGAATATCTaGATCCAAGCAAAGAAAAGGTTGACCGCGTTCATGTTATTGTAC | + |
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Preference number: 6 (lower is better) Translates to: ESCVMVLLKLIYLNI*IQAKKRLTAFMLLY Trigger: GTACAATAACATGAACGCGGTCAACCTTTTCTTTGCTTGGATCAAGATATTCAAGTATATCAGCTTCAACAAGACCATGACACAGCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042026.5 |
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