Pregenerated sensors for PKD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034462Ensembl transcript IDs: ENSMUST00000086831.4
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCAAGTGTTGGGATTAAAGGCGTTCACCACCACTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: LCSPGWPRTQKSTCL*LPSVGIKGVHHHCP Trigger: CGGGCAGTGGTGGTGAACGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR GCA 90 bp | GTTTCTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTaGCTCTGCCTCCCAAGTGTTGGGATTAAAGGCGTTCACCACCAC | + |
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Preference number: 1 (lower is better) Translates to: VSLCSPGWPRTQKST*LCLPSVGIKGVHHH Trigger: GTGGTGGTGAACGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CCA 90 bp | AAGCTGACGAGAAAAGGCCTGTCTACTCAGCAGTCTGTTAGAGGTTaGAGAGGTTTGGTATATTCTAGGAAGTCAATGAATTCTTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: KLTRKGLSTQQSVRG*RGLVYSRKSMNSCE Trigger: TTCACAAGAATTCATTGACTTCCTAGAATATACCAAACCTCTCCAACCTCTAACAGACTGCTGAGTAGACAGGCCTTTTCTCGTCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR GCA 90 bp | CCAGAAAGGTTGCTGAAATACTACTCCTTCCTTAGAAGAAAGATATaGAGTAAGCTCCGAGTTATACCTCAGTGGAATGAAATGTCATGT | + |
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Preference number: 1 (lower is better) Translates to: PERLLKYYSFLRRKI*SKLRVIPQWNEMSC Trigger: ACATGACATTTCATTCCACTGAGGTATAACTCGGAGCTTACTGCATATCTTTCTTCTAAGGAAGGAGTAGTATTTCAGCAACCTTTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CAA 90 bp | GCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGTaGGGATTAAAGGCGTTCACCACCACTGCCCGGCTCCAATCCTAC | + |
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Preference number: 2 (lower is better) Translates to: AGLELRNPPASASQV*GLKAFTTTARLQSY Trigger: GTAGGATTGGAGCCGGGCAGTGGTGGTGAACGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCTACATATCCTTTCTCTaGACCCCAGAAAGGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LCVALAGLELRNPPASASYISFL*TPERLL Trigger: CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTA...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CAA 90 bp | CTCTTCTACTTGTTCTCTACCTCTGGCTTCTCTACCAGCTTGGCTTaGTTTCTTCTGACCCCTAGCTCTCAAAGGGCCAAGTTATTCAAC | + |
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Preference number: 2 (lower is better) Translates to: LFYLFSTSGFSTSLA*FLLTPSSQRAKLFN Trigger: GTTGAATAACTTGGCCCTTTGAGAGCTAGGGGTCAGAAGAAACAAAGCCAAGCTGGTAGAGAAGCCAGAGGTAGAGAACAAGTAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CAA 90 bp | AGGATTCTCTTCTACTTGTTCTCTACCTCTGGCTTCTCTACCAGCTaGGCTTTGTTTCTTCTGACCCCTAGCTCTCAAAGGGCCAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RILFYLFSTSGFSTS*ALFLLTPSSQRAKL Trigger: TAACTTGGCCCTTTGAGAGCTAGGGGTCAGAAGAAACAAAGCCAAGCTGGTAGAGAAGCCAGAGGTAGAGAACAAGTAGAAGAGAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR CCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCATGCAGCAGACTGTGGTaGCTCCACACGAACTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: IIGIRHMVDTHGYHIINACSRLW*LHTNSE Trigger: CTCTGAGTTCGTGTGGAGCCACCACAGTCTGCTGCA...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAAAATCCACCTGCCTCTaGCTCCCAAGTGTTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: LVDLFCKYINLQYPRPLTKSTCL*LPSVGI Trigger: AATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTT...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGAAGACAAACCTTCCTTaGACCACGGGTTTAAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: FSTVATYISFLCTPERLLKTNLP*TTGLSL Trigger: TAAACTTAAACCCGTGGTTCAAGGAAGGTTTGTCTT...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CAA 90 bp | CTTGTGAATTTCAAATACGGTACTAAGCCCAGGATTCTCTTCTACTaGTTCTCTACCTCTGGCTTCTCTACCAGCTTGGCTTTGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LVNFKYGTKPRILFY*FSTSGFSTSLALFL Trigger: AAGAAACAAAGCCAAGCTGGTAGAGAAGCCAGAGGTAGAGAACAAGTAGAAGAGAATCCTGGGCTTAGTACCGTATTTGAAATTCACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR GCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGCTTAGAAGAAAGATATaGAGTAAGCTCCGAGTTATA | + |
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Preference number: 2 (lower is better) Translates to: FSTVATYISFLCTPERLLLRRKI*SKLRVI Trigger: TATAACTCGGAGCTTACTGCATATCTTTCTTCTAAG...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR CCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGCGAGTTATACCTCAGTaGAATGAAATGTCATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: FSTVATYISFLCTPERLLRVIPQ*NEMSCF Trigger: AAAACATGACATTTCATTCCACTGAGGTATAACTCG...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR TCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAAAATGTAGTAAGAATTaGAGGCCCCTTCCAATCCTA | + |
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Preference number: 2 (lower is better) Translates to: IIGIRHMVDTHGYHIINAKCSKN*RPLPIL Trigger: TAGGATTGGAAGGGGCCTTCAATTCTTACTACATTT...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CAA 90 bp | AGAAAAGGCCTGTCTACTCAGCAGTCTGTTAGAGGTTGGAGAGGTTaGGTATATTCTAGGAAGTCAATGAATTCTTGTGAATTTCAAATA | + |
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Preference number: 2 (lower is better) Translates to: RKGLSTQQSVRGWRG*VYSRKSMNSCEFQI Trigger: TATTTGAAATTCACAAGAATTCATTGACTTCCTAGAATATACCAAACCTCTCCAACCTCTAACAGACTGCTGAGTAGACAGGCCTTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR GCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAATAATACCCCTGCAATaGAAAATCCAATACCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: IIGIRHMVDTHGYHIINAIIPLQ*KIQYLG Trigger: TCCTAGGTATTGGATTTTGCATTGCAGGGGTATTAT...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR GCA 72 bp | CCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCAAGTGTTGGGATTAAAGGCGTTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQKSTCL*LPSVGIKGVHH Trigger: GTGGTGAACGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR GCA 72 bp | TGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTaGCTCTGCCTCCCAAGTGTTGGGATTAAAGGCGTT | + |
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Preference number: 3 (lower is better) Translates to: CSPGWPRTQKST*LCLPSVGIKGV Trigger: AACGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR GCA 72 bp | TTGATGTGCAGCCATCAGAATCAGGGAAACATGGCGTaGCTCGCTTCTGTGGAAGCTGACGAGAAAAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LMCSHQNQGNMA*LASVEADEKRP Trigger: AGGCCTTTTCTCGTCAGCTTCCACAGAAGCGAGGCACGCCATGTTTCCCTGATTCTGATGGCTGCACATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CCA 72 bp | ATCAGAATCAGGGAAACATGGCGTGCCTCGCTTCTGTaGAAGCTGACGAGAAAAGGCCTGTCTACTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: IRIRETWRASLL*KLTRKGLSTQQ Trigger: CTGCTGAGTAGACAGGCCTTTTCTCGTCAGCTTCCACAGAAGCGAGGCACGCCATGTTTCCCTGATTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR GCA 72 bp | ACCCCTAGCTCTCAAAGGGCCAAGTTATTCAACAACTaGTGTGGTCACACTGGCCCTAATCCCAGCACTCAA | + |
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Preference number: 3 (lower is better) Translates to: TPSSQRAKLFNN*CGHTGPNPSTQ Trigger: TTGAGTGCTGGGATTAGGGCCAGTGTGACCACAGCAGTTGTTGAATAACTTGGCCCTTTGAGAGCTAGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR-3UTR CAA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCATGCACCCCAGAAAGGTaGCTGAAATACTACTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: IIGIRHMVDTHGYHIINACTPER*LKYYSF Trigger: GAAGGAGTAGTATTTCAGCAACCTTTCTGGGGTGCA...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CCA 72 bp | AGAAAAGGCCTGTCTACTCAGCAGTCTGTTAGAGGTTaGAGAGGTTTGGTATATTCTAGGAAGTCAATGAAT | + |
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Preference number: 3 (lower is better) Translates to: RKGLSTQQSVRG*RGLVYSRKSMN Trigger: ATTCATTGACTTCCTAGAATATACCAAACCTCTCCAACCTCTAACAGACTGCTGAGTAGACAGGCCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CCA 72 bp | AGAAAGATATGCAGTAAGCTCCGAGTTATACCTCAGTaGAATGAAATGTCATGTTTTTCCTTAGCATCTCGC | + |
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Preference number: 3 (lower is better) Translates to: RKICSKLRVIPQ*NEMSCFSLASR Trigger: GCGAGATGCTAAGGAAAAACATGACATTTCATTCCACTGAGGTATAACTCGGAGCTTACTGCATATCTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGGCCGCCTGCCGGATaGGCTCCATCTCGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCVALAGLELRNPPASASRPPAG*APSRSP Trigger: TGGAGATCGAGATGGAGCGCATCCGGCAGGCGGCCG...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCGGTTGTCAGCTTaGGTGTGGTTGCTGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LCVALAGLELRNPPASASLRLSA*VWLLVC Trigger: ACAGACCAGCAACCACACGCAAGCTGACAACCGAAG...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACACCCTCCAGCGGGAGGTaGCGATGCAGCGGGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTPSSGR*RCSGSP Trigger: CGGGGACCCGCTGCATCGCCACCTCCCGCTGGAGGG...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACACGCGGGTTTCTGGGGTaGGGCTGGCCACCGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTRGFLG*GWPPSP Trigger: GGGACTCGGTGGCCAGCCCCACCCCAGAAACCCGCG...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGTCGCACCAGCCTCTCTaGCCAGGCCACTCGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLSHQPL*PGHSGW Trigger: CCACCCCGAGTGGCCTGGGCAGAGAGGCTGGTGCGA...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCATTGGAGCTCATCATaGCGTAGGTCAAGATGCACA | + |
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Preference number: 4 (lower is better) Translates to: LCVALAGLELRNPPASASHWSSS*RRSRCT Trigger: TGTGCATCTTGACCTACGGCATGATGAGCTCCAATG...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCTCCATTTCTGCTTTCTaGTGGGCCAGATCGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: LCVALAGLELRNPPASASSISAF*WARSDF Trigger: GAAATCCGATCTGGCCCAGCAGAAAGCAGAAATGGA...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAGGACACTGCGCGCCCTaGTCCTCTAGCCGGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTGHCAP*SSSRRR Trigger: GCGGCGCCGGCTAGAGGACCAGGGCGCGCAGTGTCC...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAGCCACTCGGGGTGGCTaGCCCTCCAGCGGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTATRGG*PSSGRW Trigger: CCACCTCCCGCTGGAGGGCCAGCCACCCCGAGTGGC...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTGAGGGCGCGGGTTTCTaGGGTGGGGCTGGCCACCGA | + |
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Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTEGAGF*GGAGHR Trigger: TCGGTGGCCAGCCCCACCCCAGAAACCCGCGCCCTC...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCTTGTTGAACTGTATTTaGCAGTATGCCACATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LCVALAGLELRNPPASASLLNCI*QYATCS Trigger: TGAGCATGTGGCATACTGGCAAATACAGTTCAACAA...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAACCTTCCAGGCCCTCTaGAGACTGGGAGGAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTTFQAL*RLGGRR Trigger: CCTCCTTCCTCCCAGTCTGCAGAGGGCCTGGAAGGT...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCGTGAAGATACATTCTTaGAAAGTGCTGAAGTCATCG | + |
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Preference number: 4 (lower is better) Translates to: LCVALAGLELRNPPASASVKIHS*KVLKSS Trigger: CGATGACTTCAGCACTTTCCAAGAATGTATCTTCAC...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTTCGCGGCTCCACGCTTaGCTGGAGCAGGACGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTSRLHA*LEQDES Trigger: GCTTTCGTCCTGCTCCAGGCAAGCGTGGAGCCGCGA...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAAGGCCGACCTCCGACTaGCCGGGCGCCACTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: IIGIRHMVDTHGYHIINARPTSD*PGATPH Trigger: ATGTGGAGTGGCGCCCGGGCAGTCGGAGGTCGGCCT...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGTCCATCTGCTCCCTGTaGATCTCACTGTCCCGACCC | + |
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Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLSICSL*ISLSRP Trigger: GGGTCGGGACAGTGAGATCCACAGGGAGCAGATGGA...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR TCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAGGAAGGAGCCTTCGGTaGACTTCCAGAAGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTGRSLR*TSRSPP Trigger: TGGAGGACTTCTGGAAGTTCACCGAAGGCTCCTTCC...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR TCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTTCATCTCGCAGGTCCTaGGGGATGGAGCAGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTSSRRS*GMEQDP Trigger: CGGATCCTGCTCCATCCCTCAGGACCTGCGAGATGA...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGGTGGTTGCTGGTCTGTaGCTTCCAGTACAGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLVVAGL*LPVQPI Trigger: GATGGGCTGTACTGGAAGGCACAGACCAGCAACCAC...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACACAGCTTGCGTGTGGTTaGTGGTCTGTGCCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTQLACG*WSVPSS Trigger: ACTGGAAGGCACAGACCAGCAACCACACGCAAGCTG...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACACTGAGGCCAGCAAGCTaGGCTGCTGTCTCCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTLRPAS*AAVSSL Trigger: CAGGGAGGAGACAGCAGCCCAGCTTGCTGGCCTCAG...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGTGCTTCCCCTCCTCCTaGAGCTATGGCCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLCFPSS*SYGHCL Trigger: AAGACAGTGGCCATAGCTCCAGGAGGAGGGGAAGCA...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGCATAGGAAACCCCACTaGAGATGCTTCCCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLHRKPH*RCFPSS Trigger: GGAGGAGGGGAAGCATCTCCAGTGGGGTTTCCTATG...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CAA 72 bp | TTGTTCTCTACCTCTGGCTTCTCTACCAGCTTGGCTTaGTTTCTTCTGACCCCTAGCTCTCAAAGGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSTSGFSTSLA*FLLTPSSQRAK Trigger: CTTGGCCCTTTGAGAGCTAGGGGTCAGAAGAAACAAAGCCAAGCTGGTAGAGAAGCCAGAGGTAGAGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAATCGAGACATGGTTGTaGAGAGCTGGCTCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTIETWL*RAGSWS Trigger: GGACCATGAGCCAGCTCTCCACAACCATGTCTCGAT...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACATGGCACATCGAGACATaGTTGTGGAGAGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTWHIET*LWRAGS Trigger: TGAGCCAGCTCTCCACAACCATGTCTCGATGTGCCA...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR TCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAGCAATGATCCCCCAGTaGCTGCTCCCATTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTAMIPQ*LLPFSS Trigger: GGAGCTGAATGGGAGCAGTCACTGGGGGATCATTGC...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR TCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAATTCTTGGAAAGTGCTaGAGTCATCGACCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTILGKC*SHRPGC Trigger: GCACCCAGGTCGATGACTTCAGCACTTTCCAAGAAT...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR TCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGTGTGTGCTTACACCATaGCCTGTTTGCGAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLCVLTP*PVCEAA Trigger: TGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACA...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGTATGGCCTCAATCTCTaGATCTGTATGGCCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLYGLNL*ICMALP Trigger: GGGAAGGGCCATACAGATGCAGAGATTGAGGCCATA...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAAAACCCCACTGGAGATaGTTCCCCTCCTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTKPHWR*FPSSWS Trigger: GCTCCAGGAGGAGGGGAAGCATCTCCAGTGGGGTTT...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR TCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTCGTTGCTCTCTTCCATaGGTCTTGTTCCCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTRCSLP*VLFPRD Trigger: GTCTCTGGGGAACAAGACTCATGGAAGAGAGCAACG...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR GCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTAGTCATCGACCTGGGTaGCGAAGACAAGGTATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTSHRPG*RRQGMP Trigger: TGGCATACCTTGTCTTCGGCACCCAGGTCGATGACT...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR CCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAATCTCTGCATCTGTATaGCCCTTCCCTTTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTISASV*PFPFRS Trigger: AGACCTGAAAGGGAAGGGCCATACAGATGCAGAGAT...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| 3UTR CAA 72 bp | TTCTACTTGTTCTCTACCTCTGGCTTCTCTACCAGCTaGGCTTTGTTTCTTCTGACCCCTAGCTCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYLFSTSGFSTS*ALFLLTPSSQR Trigger: CCTTTGAGAGCTAGGGGTCAGAAGAAACAAAGCCAAGCTGGTAGAGAAGCCAGAGGTAGAGAACAAGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR GCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACACTGTATTTGCCAGTATaGCACATGCTCAAAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTLYLPV*HMLKVG Trigger: CCCAACTTTGAGCATGTGGCATACTGGCAAATACAG...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGAGCTTCCTCGATCTCTaGGAAGTTGATATCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLSFLDL*EVDITQ Trigger: TTGGGTGATATCAACTTCGCAGAGATCGAGGAAGCT...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR GCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAACCTGTTTGCGAAGCTaGATCATCCGATTCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTTCLRS*IIRFPA Trigger: CGCTGGGAATCGGATGATGCAGCTTCGCAAACAGGT...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGTGTAGTAGTACACATTaGAGCTCATCATGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLCSSTH*SSSCRR Trigger: CCTACGGCATGATGAGCTCCAATGTGTACTACTACA...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAATTCCGCGGTCCAAATaGAGCTCTGTCCTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTIPRSK*SSVLTA Trigger: AGCAGTGAGGACAGAGCTCCATTTGGACCGCGGAAT...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR CCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCACGCTCGGTCAGTTCCTaGTCGCCATCCTGGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IIGIRHMVDTHGYHIINARSVSS*SPSWSY Trigger: ATATGACCAGGATGGCGACCAGGAACTGACCGAGCG...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTAGTCATCCAGGCTTCTaGGGAAACTTCTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTSHPGF*GNFCCS Trigger: TGAGCAGCAGAAGTTTCCCCAGAAGCCTGGATGACT...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR TCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAGGAAAAAGAGGTAAGTaGCCAGCTCCCGTAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTGKRGK*PAPVTH Trigger: GTGTGTTACGGGAGCTGGTCACTTACCTCTTTTTCC...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTGATGATCTCACAGGCTaGCAGGAAGAAATCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTDDLTG*QEEIKG Trigger: GCCTTTGATTTCTTCCTGGCAGCCTGTGAGATCATC...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTCAATCTTGGAAACGATaGTGCCAATGGAGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTQSWKR*CQWSAP Trigger: TGGAGCACTCCATTGGCAGCATCGTTTCCAAGATTG...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACACTGAAGTCATCGACCTaGGTGCCGAAGACAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTLKSST*VPKTRY Trigger: ATACCTTGTCTTCGGCACCCAGGTCGATGACTTCAG...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR TCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAATCAGTTTTACAGGCTaGAACTGCCAAGAGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTISFTG*NCQEGT Trigger: GGTACCCTCTTGGCAGTTTCAGCCTGTAAAACTGAT...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR TCA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAAATTCCAGAAACTCCTaGAATAGCTCAGTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVPGRPGVYSENLSLTNSRNS*NSSVCE Trigger: TTCACAGACTGAGCTATTTCAGGAGTTTCTGGAATT...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR TCA 90 bp | TTTAGCACAGTGGCTACATACATATCCTTTCTCTGCACCCCAGAAAGGTTGCTGCTTTCTGATAAGGTCTaGGAGTTCCATTTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVATYISFLCTPERLLLSDKV*EFHFCF Trigger: AAAGCAGAAATGGAACTCTCAGACCTTATCAGAAAG...CAGCAACCTTTCTGGGGTGCAGAGAAAGGATATGTATGTAGCCACTGTGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCATGGGGAAACTTCTGCTaGTCATCGGACGTGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIGIRHMVDTHGYHIINAWGNFC*SSDVVK Trigger: CTTTACCACGTCCGATGAGCAGCAGAAGTTTCCCCA...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAAGCCGAAGAGGTCTTTaGCACATCGAGACATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IIGIRHMVDTHGYHIINASRRGL*HIETWL Trigger: CAACCATGTCTCGATGTGCCAAAGACCTCTTCGGCT...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTATTTCTGCTTTCTGCTaGGCCAGATCGGATTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTISAFC*ARSDFT Trigger: AGTGAAATCCGATCTGGCCCAGCAGAAAGCAGAAAT...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACATGCCAGTATGCCACATaGTCAAAGTTGGGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTCQYAT*SKLGKE Trigger: TTCTTTCCCCAACTTTGAGCATGTGGCATACTGGCA...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACATTCCCTTTCAGGTCTTaGCGAAGCTCATCAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVDLFCKYINLQYPRPLTFPFRS*RSSSKF Trigger: GAACTTTGATGAGCTTCGGCAAGACCTGAAAGGGAA...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| 3UTR CAA 72 bp | CTGTCTACTCAGCAGTCTGTTAGAGGTTGGAGAGGTTaGGTATATTCTAGGAAGTCAATGAATTCTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSTQQSVRGWRG*VYSRKSMNSCE Trigger: TTCACAAGAATTCATTGACTTCCTAGAATATACCAAACCTCTCCAACCTCTAACAGACTGCTGAGTAGACAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR GCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAGAACAGGTTAATGTTTaGGTTATACACCGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IIGIRHMVDTHGYHIINAEQVNV*VIHREV Trigger: GACTTCTCGGTGTATAACGCAAACATTAACCTGTTC...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CCA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAAAAATGATGCGGAACTaGGTGAAGATACATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IIGIRHMVDTHGYHIINAKMMRN*VKIHSW Trigger: CCAAGAATGTATCTTCACCCAGTTCCGCATCATTTT...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | GAGTCTTGTTCCCCAGAGACCTCGCAGCCCTCGCACCAGCCTCTCTaGCCAGGCCACTCGGGGTGGCTGGCCCTCCAGCGGGAGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ESCSPETSQPSHQPL*PGHSGWLALQREVA Trigger: CGCCACCTCCCGCTGGAGGGCCAGCCACCCCGAGTGGCCTGGGCAGAGAGGCTGGTGCGAGGGCTGCGAGGTCTCTGGGGAACAAGACTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | GGGCGCCCACCGAGCTCACGGCCGAGGAGGAGGCCGACCTCCGACTaGCCGGGCGCCACTCCACATCCATCTCTACCACCATCCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRPPSSRPRRRPTSD*PGATPHPSLPPSLL Trigger: AAGGAGGGATGGTGGTAGAGATGGATGTGGAGTGGCGCCCGGGCAGTCGGAGGTCGGCCTCCTCCTCGGCCGTGAGCTCGGTGGGCGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | TCCGATTCCCAGCGCTCCAGCTCTTCCCGCACCAGGCGCTCCATCTaGTCCCTGTGGATCTCACTGTCCCGACCCAGTCGCGCATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDSQRSSSSRTRRSI*SLWISLSRPSRASS Trigger: TGAGGATGCGCGACTGGGTCGGGACAGTGAGATCCACAGGGAGCAGATGGAGCGCCTGGTGCGGGAAGAGCTGGAGCGCTGGGAATCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | CCCTCCTTCTTCTCCTTCCACCTCGTCGTCGTCGTCATCCTCCTCTaGCTCAAAGCCCGGGTTGTCGCGGCTCCACGCTTGCCTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSFFSFHLVVVVILL*LKARVVAAPRLPGA Trigger: TGCTCCAGGCAAGCGTGGAGCCGCGACAACCCGGGCTTTGAGGCAGAGGAGGATGACGACGACGACGAGGTGGAAGGAGAAGAAGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | GCCCCGGTCCAGCCAGAAGTTCCTCCTGAGGCCAGCAAGCTGGGCTaGTGTCTCCTCCCTGGTTCTGGACAGATCCAGGTAGTAACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: APVQPEVPPEASKLG*CLLPGSGQIQVVTR Trigger: GCGGGTTACTACCTGGATCTGTCCAGAACCAGGGAGGAGACAGCAGCCCAGCTTGCTGGCCTCAGGAGGAACTTCTGGCTGGACCGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS TCA 90 bp | CTGGGGTGGGGCTGGCCACCGAGTCCCACTTGTGTGCTTACACCATaGCCTGTTTGCGAAGCTGCATCATCCGATTCCCAGCGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGWGWPPSPTCVLTP*PVCEAASSDSQRSS Trigger: GCTGGAGCGCTGGGAATCGGATGATGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTGGGACTCGGTGGCCAGCCCCACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS GCA 90 bp | GGCGCGGGTTTCTGGGGTGGGGCTGGCCACCGAGTCCCACTTGTGTaGTTACACCATGACCTGTTTGCGAAGCTGCATCATCCGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGFWGGAGHRVPLV*LHHDLFAKLHHPIP Trigger: GGGAATCGGATGATGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTGGGACTCGGTGGCCAGCCCCACCCCAGAAACCCGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCGCTTCGGTTGTCAGCTaGCGTGTGGTTGCTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCVALAGLELRNPPASASASVVS*RVVAGL Trigger: CAGACCAGCAACCACACGCAAGCTGACAACCGAAGC...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS GCA 90 bp | ACCGAGTCCCACTTGTGTGCTTACACCATGACCTGTTTGCGAAGCTaGATCATCCGATTCCCAGCGCTCCAGCTCTTCCCGCACCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TESHLCAYTMTCLRS*IIRFPALQLFPHQA Trigger: CGCCTGGTGCGGGAAGAGCTGGAGCGCTGGGAATCGGATGATGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTGGGACTCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGTAGCCCTGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCGTCATCTCTCATCTGTaGATGCTCACGCTCGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCVALAGLELRNPPASASVISHL*MLTLGQ Trigger: CTGACCGAGCGTGAGCATCAACAGATGAGAGATGAC...GGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCAGGGCTACACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS CCA 90 bp | CCACGCGCCTCACCAGTACTTGGAACTCTTCATAGGAAACCCCACTaGAGATGCTTCCCCTCCTCCTGGAGCTATGGCCACTGTCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRASPVLGTLHRKPH*RCFPSSWSYGHCLR Trigger: ACGAAGACAGTGGCCATAGCTCCAGGAGGAGGGGAAGCATCTCCAGTGGGGTTTCCTATGAAGAGTTCCAAGTACTGGTGAGGCGCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 90 bp | GGCCACTGTCTTCGTCATCCTCCTCCTCGGAGTCATCCAGGCTTCTaGGGAAACTTCTGCTGCTCATCGGACGTGGTAAAGAGCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHCLRHPPPRSHPGF*GNFCCSSDVVKSCV Trigger: AACACAGCTCTTTACCACGTCCGATGAGCAGCAGAAGTTTCCCCAGAAGCCTGGATGACTCCGAGGAGGAGGATGACGAAGACAGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 90 bp | GGAACTCTTCATAGGAAACCCCACTGGAGATGCTTCCCCTCCTCCTaGAGCTATGGCCACTGTCTTCGTCATCCTCCTCCTCGGAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GTLHRKPHWRCFPSS*SYGHCLRHPPPRSH Trigger: ATGACTCCGAGGAGGAGGATGACGAAGACAGTGGCCATAGCTCCAGGAGGAGGGGAAGCATCTCCAGTGGGGTTTCCTATGAAGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAGCCTCAAAGCCCGGGTaGTCGCGGCTCCACGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVPGRPGVYSENLSLTASKPG*SRLHAC Trigger: GCAAGCGTGGAGCCGCGACAACCCGGGCTTTGAGGC...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | GAACAGGTTAATGTTTGCGTTATACACCGAGAAGTCTATAAAAGCTaGCCGCGTGCCCCGGTCCAGCCAGAAGTTCCTCCTGAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EQVNVCVIHREVYKS*PRAPVQPEVPPEAS Trigger: GCTGGCCTCAGGAGGAACTTCTGGCTGGACCGGGGCACGCGGGCAGCTTTTATAGACTTCTCGGTGTATAACGCAAACATTAACCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | CATCCTCCTCCTCGGAGTCATCCAGGCTTCTGGGGAAACTTCTGCTaGTCATCGGACGTGGTAAAGAGCTGTGTTCCAAGTCTAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPPPRSHPGFWGNFC*SSDVVKSCVPSLGP Trigger: AGGACCTAGACTTGGAACACAGCTCTTTACCACGTCCGATGAGCAGCAGAAGTTTCCCCAGAAGCCTGGATGACTCCGAGGAGGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | CGTCATCCTCCTCCTCGGAGTCATCCAGGCTTCTGGGGAAACTTCTaGTGCTCATCGGACGTGGTAAAGAGCTGTGTTCCAAGTCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RHPPPRSHPGFWGNF*CSSDVVKSCVPSLG Trigger: ACCTAGACTTGGAACACAGCTCTTTACCACGTCCGATGAGCAGCAGAAGTTTCCCCAGAAGCCTGGATGACTCCGAGGAGGAGGATGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS TCA 90 bp | TTCTGGACAGATCCAGGTAGTAACCCGCTCCACTGTACGACGCAATaGTCCCCCAGTGACTGCTCCCATTCAGCTCCTTCTCACTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FWTDPGSNPLHCTTQ*SPSDCSHSAPSHLC Trigger: ACACAAGTGAGAAGGAGCTGAATGGGAGCAGTCACTGGGGGATCATTGCGTCGTACAGTGGAGCGGGTTACTACCTGGATCTGTCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | GGCCCTTCCCTTTCAGGTCTTGCCGAAGCTCATCAAAGTTCAGTTTaGCACCACCTTGCCGGAGACTCTCTGAGATGGCATCTACAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPSLSGLAEAHQSSV*HHLAGDSLRWHLQC Trigger: ACACTGTAGATGCCATCTCAGAGAGTCTCCGGCAAGGTGGTGGCAAACTGAACTTTGATGAGCTTCGGCAAGACCTGAAAGGGAAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 90 bp | CTTCTCACTTGTGTACATCCACGCAGTTCCATTCCGCGGTCCAAATaGAGCTCTGTCCTCACTGCTGACGGAGTAGACGTCATAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTCVHPRSSIPRSK*SSVLTADGVDVIAL Trigger: GAGTGCTATGACGTCTACTCCGTCAGCAGTGAGGACAGAGCTCCATTTGGACCGCGGAATGGAACTGCGTGGATGTACACAAGTGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | GTCATCGACCTGGGTGCCGAAGACAAGGTATGCCAGCTGTGCGTATaGCAAGAAGATGATGGAGAACATTATGGTGAAGCCGAAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VIDLGAEDKVCQLCV*QEDDGEHYGEAEEV Trigger: GACCTCTTCGGCTTCACCATAATGTTCTCCATCATCTTCTTGGCATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAGGTCGATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | TCACGGCATCAATCTTGGAAACGATGCTGCCAATGGAGTGCTCCATaGGGTCCACGCGCCTCACCAGTACTTGGAACTCTTCATAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRHQSWKRCCQWSAP*GPRASPVLGTLHRK Trigger: TTTCCTATGAAGAGTTCCAAGTACTGGTGAGGCGCGTGGACCGCATGGAGCACTCCATTGGCAGCATCGTTTCCAAGATTGATGCCGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | TTGACAATCACGGCATCAATCTTGGAAACGATGCTGCCAATGGAGTaGTCCATGCGGTCCACGCGCCTCACCAGTACTTGGAACTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTITASILETMLPME*SMRSTRLTSTWNSS Trigger: TGAAGAGTTCCAAGTACTGGTGAGGCGCGTGGACCGCATGGAGCACTCCATTGGCAGCATCGTTTCCAAGATTGATGCCGTGATTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
||
| CDS-3UTR CAA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTGTCGCGGCTCCACGCTaGCCTGGAGCAGGACGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTVAAPR*PGAGRK Trigger: CTTTCGTCCTGCTCCAGGCAAGCGTGGAGCCGCGAC...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS TCA 90 bp | AAGTCTAGGTCCTCCCTCTCTTTCTCCAAGTCATCTCTCATCTGTTaGTGCTCACGCTCGGTCAGTTCCTGGTCGCCATCCTGGTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: KSRSSLSFSKSSLIC*CSRSVSSWSPSWSY Trigger: ATATGACCAGGATGGCGACCAGGAACTGACCGAGCGTGAGCATCAACAGATGAGAGATGACTTGGAGAAAGAGAGGGAGGACCTAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | GCTGAAGTCATCGACCTGGGTGCCGAAGACAAGGTATGCCAGCTGTaGGTATGCCAAGAAGATGATGGAGAACATTATGGTGAAGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: AEVIDLGAEDKVCQL*VCQEDDGEHYGEAE Trigger: TTCGGCTTCACCATAATGTTCTCCATCATCTTCTTGGCATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAGGTCGATGACTTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | CTGGTCGCCATCCTGGTCATATTTAGTGAATATGGCCTCAATCTCTaGATCTGTATGGCCCTTCCCTTTCAGGTCTTGCCGAAGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVAILVIFSEYGLNL*ICMALPFQVLPKLI Trigger: GATGAGCTTCGGCAAGACCTGAAAGGGAAGGGCCATACAGATGCAGAGATTGAGGCCATATTCACTAAATATGACCAGGATGGCGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 90 bp | AACTGGGTGAAGATACATTCTTGGAAAGTGCTGAAGTCATCGACCTaGGTGCCGAAGACAAGGTATGCCAGCTGTGCGTATGCCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NWVKIHSWKVLKSST*VPKTRYASCAYAKK Trigger: CTTCTTGGCATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAGGTCGATGACTTCAGCACTTTCCAAGAATGTATCTTCACCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS TCA 90 bp | TGCCGTAGGTCAAGATGCACAAGACTACGAGGAAAAAGAGGTAAGTaGCCAGCTCCCGTAACACACTTTTCAGGTACTTCTCTCGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRRSRCTRLRGKRGK*PAPVTHFSGTSLGW Trigger: CCAACCGAGAGAAGTACCTGAAAAGTGTGTTACGGGAGCTGGTCACTTACCTCTTTTTCCTCGTAGTCTTGTGCATCTTGACCTACGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | TTGGAAAGTGCTGAAGTCATCGACCTGGGTGCCGAAGACAAGGTATaGCAGCTGTGCGTATGCCAAGAAGATGATGGAGAACATTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LESAEVIDLGAEDKV*QLCVCQEDDGEHYG Trigger: ACCATAATGTTCTCCATCATCTTCTTGGCATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAGGTCGATGACTTCAGCACTTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAAGGTACTTCTCTCGGTaGGCGTTGCTCTCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVPGRPGVYSENLSLTRYFSR*ALLSSM Trigger: CATGGAAGAGAGCAACGCCAACCGAGAGAAGTACCT...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | TTCAGGTCTTGCCGAAGCTCATCAAAGTTCAGTTTGCCACCACCTTaGCGGAGACTCTCTGAGATGGCATCTACAGTGTTTCTTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FRSCRSSSKFSLPPP*RRLSEMASTVFLFS Trigger: ACTGAAAAGAAACACTGTAGATGCCATCTCAGAGAGTCTCCGGCAAGGTGGTGGCAAACTGAACTTTGATGAGCTTCGGCAAGACCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ACACAGTTAGTTCCAGGCCGGCCAGGAGTATATAGTGAAAACCTGTCTTTGACAGCGCCTCACCAGTACTaGGAACTCTTCATAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVPGRPGVYSENLSLTAPHQY*ELFIGN Trigger: GTTTCCTATGAAGAGTTCCAAGTACTGGTGAGGCGC...TGTCAAAGACAGGTTTTCACTATATACTCCTGGCCGGCCTGGAACTAACTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 90 bp | TGGCAGCCCTTTCTGATAAGGTCTGAGAGTTCCATTTCTGCTTTCTaGTGGGCCAGATCGGATTTCACTTCAGAGTACGAATCATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WQPFLIRSESSISAF*WARSDFTSEYESLM Trigger: CATCAATGATTCGTACTCTGAAGTGAAATCCGATCTGGCCCAGCAGAAAGCAGAAATGGAACTCTCAGACCTTATCAGAAAGGGCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACACACATCGAGACATGGTaGTGGAGAGCTGGCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LVDLFCKYINLQYPRPLTHIETW*WRAGSW Trigger: CCATGAGCCAGCTCTCCACAACCATGTCTCGATGTG...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 90 bp | CAGCCCTTTCTGATAAGGTCTGAGAGTTCCATTTCTGCTTTCTGCTaGGCCAGATCGGATTTCACTTCAGAGTACGAATCATTGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: QPFLIRSESSISAFC*ARSDFTSEYESLMI Trigger: GATCATCAATGATTCGTACTCTGAAGTGAAATCCGATCTGGCCCAGCAGAAAGCAGAAATGGAACTCTCAGACCTTATCAGAAAGGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 90 bp | TCCTGGTCATATTTAGTGAATATGGCCTCAATCTCTGCATCTGTATaGCCCTTCCCTTTCAGGTCTTGCCGAAGCTCATCAAAGTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SWSYLVNMASISASV*PFPFRSCRSSSKFS Trigger: ACTGAACTTTGATGAGCTTCGGCAAGACCTGAAAGGGAAGGGCCATACAGATGCAGAGATTGAGGCCATATTCACTAAATATGACCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | TTAGTGGATCTCTTCTGCAAATATATAAACCTACAATACCCAAGGCCCCTCACAAAGCCGAAGAGGTCTTaGGCACATCGAGACATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVDLFCKYINLQYPRPLTKPKRS*AHRDMV Trigger: AACCATGTCTCGATGTGCCAAAGACCTCTTCGGCTT...TGTGAGGGGCCTTGGGTATTGTAGGTTTATATATTTGCAGAAGAGATCCACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCATTCTCTCGGTTGGCGTaGCTCTCTTCCATGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IIGIRHMVDTHGYHIINAFSRLA*LSSMSL Trigger: AAGACTCATGGAAGAGAGCAACGCCAACCGAGAGAA...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ATTGGTCACAAAGACCAGCATCATAATGCAGCCGGGGTATATAAATACCGAACTATTGTTGAACTGTATTaGCCAGTATGCCACATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IGHKDQHHNAAGVYKYRTIVELY*PVCHML Trigger: GAGCATGTGGCATACTGGCAAATACAGTTCAACAAT...AGTTCGGTATTTATATACCCCGGCTGCATTATGATGCTGGTCTTTGTGACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAGGTGAAGATACATTCTaGGAAAGTGCTGAAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IIGIRHMVDTHGYHIINAGEDTF*ESAEVI Trigger: GATGACTTCAGCACTTTCCAAGAATGTATCTTCACC...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCATCGATCTCTGCGAAGTaGATATCACCCAAAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: IIGIRHMVDTHGYHIINASISAK*ISPKMM Trigger: CATCATTTTGGGTGATATCAACTTCGCAGAGATCGA...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS-3UTR CAA 90 bp | ATAATAGGCATACGGCACATGGTCGATACACATGGATACCACATAATTAATGCAATGACAGCACTTATATaGTTGAACTGTATTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IIGIRHMVDTHGYHIINAMTALI*LNCICQ Trigger: CTGGCAAATACAGTTCAACAATATAAGTGCTGTCAT...TGCATTAATTATGTGGTATCCATGTGTATCGACCATGTGCCGTATGCCTATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | GCCGAGGCTCCGGCCGGGGGATCCCGAGCGGCCGCCTaGCGGATGCGCTCCATCTCGATCTCCAGGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AEAPAGGSRAAA*RMRSISISRPR Trigger: GCGGGGCCTGGAGATCGAGATGGAGCGCATCCGGCAGGCGGCCGCTCGGGATCCCCCGGCCGGAGCCTCGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | TCCCCAGAGACCTCGCAGCCCTCGCACCAGCCTCTCTaGCCAGGCCACTCGGGGTGGCTGGCCCTCCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPETSQPSHQPL*PGHSGWLALQR Trigger: CCGCTGGAGGGCCAGCCACCCCGAGTGGCCTGGGCAGAGAGGCTGGTGCGAGGGCTGCGAGGTCTCTGGGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | CCGAGCTCACGGCCGAGGAGGAGGCCGACCTCCGACTaGCCGGGCGCCACTCCACATCCATCTCTACCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PSSRPRRRPTSD*PGATPHPSLPP Trigger: TGGTGGTAGAGATGGATGTGGAGTGGCGCCCGGGCAGTCGGAGGTCGGCCTCCTCCTCGGCCGTGAGCTCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | TCTGCCTCAAAGCCCGGGTTGTCGCGGCTCCACGCTTaGCTGGAGCAGGACGAAAGCGGAGGAGACGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SASKPGLSRLHA*LEQDESGGDGE Trigger: CTCGCCGTCTCCTCCGCTTTCGTCCTGCTCCAGGCAAGCGTGGAGCCGCGACAACCCGGGCTTTGAGGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | CTCTGCCTCAAAGCCCGGGTTGTCGCGGCTCCACGCTaGCCTGGAGCAGGACGAAAGCGGAGGAGACGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LCLKARVVAAPR*PGAGRKRRRRR Trigger: TCGCCGTCTCCTCCGCTTTCGTCCTGCTCCAGGCAAGCGTGGAGCCGCGACAACCCGGGCTTTGAGGCAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | TCCACCTCGTCGTCGTCGTCATCCTCCTCTGCCTCAAAGCCCGGGTaGTCGCGGCTCCACGCTTGCCTGGAGCAGGACGAAAGCGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: STSSSSSSSSASKPG*SRLHACLEQDESGG Trigger: TCCTCCGCTTTCGTCCTGCTCCAGGCAAGCGTGGAGCCGCGACAACCCGGGCTTTGAGGCAGAGGAGGATGACGACGACGACGAGGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 72 bp | AGCTCTTCCCGCACCAGGCGCTCCATCTGCTCCCTGTaGATCTCACTGTCCCGACCCAGTCGCGCATCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSRTRRSICSL*ISLSRPSRASS Trigger: TGAGGATGCGCGACTGGGTCGGGACAGTGAGATCCACAGGGAGCAGATGGAGCGCCTGGTGCGGGAAGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | TCGTCGTCGTCATCCTCCTCTGCCTCAAAGCCCGGGTaGTCGCGGCTCCACGCTTGCCTGGAGCAGGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSASKPG*SRLHACLEQDE Trigger: TTCGTCCTGCTCCAGGCAAGCGTGGAGCCGCGACAACCCGGGCTTTGAGGCAGAGGAGGATGACGACGACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | TTCTCCTTCCACCTCGTCGTCGTCGTCATCCTCCTCTaGCTCAAAGCCCGGGTTGTCGCGGCTCCACGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSFHLVVVVILL*LKARVVAAPRL Trigger: CAAGCGTGGAGCCGCGACAACCCGGGCTTTGAGGCAGAGGAGGATGACGACGACGACGAGGTGGAAGGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | CGGGTTTCTGGGGTGGGGCTGGCCACCGAGTCCCACTaGTGTGCTTACACCATGACCTGTTTGCGAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVSGVGLATESH*CAYTMTCLRSC Trigger: GCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTGGGACTCGGTGGCCAGCCCCACCCCAGAAACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | GGGCTGGCCACCGAGTCCCACTTGTGTGCTTACACCATGACCTGTTaGCGAAGCTGCATCATCCGATTCCCAGCGCTCCAGCTCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GLATESHLCAYTMTC*RSCIIRFPALQLFP Trigger: CGGGAAGAGCTGGAGCGCTGGGAATCGGATGATGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTGGGACTCGGTGGCCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | GCTGCCAATGGAGTGCTCCATGCGGTCCACGCGCCTCACCAGTACTaGGAACTCTTCATAGGAAACCCCACTGGAGATGCTTCCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AANGVLHAVHAPHQY*ELFIGNPTGDASPP Trigger: AGGAGGGGAAGCATCTCCAGTGGGGTTTCCTATGAAGAGTTCCAAGTACTGGTGAGGCGCGTGGACCGCATGGAGCACTCCATTGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS TCA 72 bp | TCAGGTACTTCTCTCGGTTGGCGTTGCTCTCTTCCATaGGTCTTGTTCCCCAGAGACCTCGCAGCCCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGTSLGWRCSLP*VLFPRDLAALA Trigger: TGCGAGGGCTGCGAGGTCTCTGGGGAACAAGACTCATGGAAGAGAGCAACGCCAACCGAGAGAAGTACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS TCA 72 bp | GGCTGGCCACCGAGTCCCACTTGTGTGCTTACACCATaGCCTGTTTGCGAAGCTGCATCATCCGATTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GWPPSPTCVLTP*PVCEAASSDSQ Trigger: CTGGGAATCGGATGATGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTGGGACTCGGTGGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | ACGGCATCAATCTTGGAAACGATGCTGCCAATGGAGTaGTCCATGCGGTCCACGCGCCTCACCAGTACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TASILETMLPME*SMRSTRLTSTW Trigger: CCAAGTACTGGTGAGGCGCGTGGACCGCATGGAGCACTCCATTGGCAGCATCGTTTCCAAGATTGATGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | GGAGTGCTCCATGCGGTCCACGCGCCTCACCAGTACTaGGAACTCTTCATAGGAAACCCCACTGGAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: GVLHAVHAPHQY*ELFIGNPTGDA Trigger: AGCATCTCCAGTGGGGTTTCCTATGAAGAGTTCCAAGTACTGGTGAGGCGCGTGGACCGCATGGAGCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | CCTCCTCGGAGTCATCCAGGCTTCTGGGGAAACTTCTaGTGCTCATCGGACGTGGTAAAGAGCTGTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PPRSHPGFWGNF*CSSDVVKSCVP Trigger: TGGAACACAGCTCTTTACCACGTCCGATGAGCAGCAGAAGTTTCCCCAGAAGCCTGGATGACTCCGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | CACTTGTGTGCTTACACCATGACCTGTTTGCGAAGCTaGATCATCCGATTCCCAGCGCTCCAGCTCTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: HLCAYTMTCLRS*IIRFPALQLFP Trigger: CGGGAAGAGCTGGAGCGCTGGGAATCGGATGATGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 72 bp | TGTGTACATCCACGCAGTTCCATTCCGCGGTCCAAATaGAGCTCTGTCCTCACTGCTGACGGAGTAGACGTC | + |
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Preference number: 6 (lower is better) Translates to: CVHPRSSIPRSK*SSVLTADGVDV Trigger: GACGTCTACTCCGTCAGCAGTGAGGACAGAGCTCCATTTGGACCGCGGAATGGAACTGCGTGGATGTACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 72 bp | CTTCGTCATCCTCCTCCTCGGAGTCATCCAGGCTTCTaGGGAAACTTCTGCTGCTCATCGGACGTGGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRHPPPRSHPGF*GNFCCSSDVVK Trigger: CTTTACCACGTCCGATGAGCAGCAGAAGTTTCCCCAGAAGCCTGGATGACTCCGAGGAGGAGGATGACGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | TCCCCCAGTGACTGCTCCCATTCAGCTCCTTCTCACTaGTGTACATCCACGCAGTTCCATTCCGCGGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SPSDCSHSAPSH*CTSTQFHSAVQ Trigger: TTGGACCGCGGAATGGAACTGCGTGGATGTACACAAGTGAGAAGGAGCTGAATGGGAGCAGTCACTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | ACCGAGTCCCACTTGTGTGCTTACACCATGACCTGTTaGCGAAGCTGCATCATCCGATTCCCAGCGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TESHLCAYTMTC*RSCIIRFPALQ Trigger: CTGGAGCGCTGGGAATCGGATGATGCAGCTTCGCAAACAGGTCATGGTGTAAGCACACAAGTGGGACTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | ACCAGCTCCCGTAACACACTTTTCAGGTACTTCTCTCGGTTGGCGTaGCTCTCTTCCATGAGTCTTGTTCCCCAGAGACCTCGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TSSRNTLFRYFSRLA*LSSMSLVPQRPRSP Trigger: AGGGCTGCGAGGTCTCTGGGGAACAAGACTCATGGAAGAGAGCAACGCCAACCGAGAGAAGTACCTGAAAAGTGTGTTACGGGAGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | CCTCGGAGTCATCCAGGCTTCTGGGGAAACTTCTGCTaGTCATCGGACGTGGTAAAGAGCTGTGTTCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: PRSHPGFWGNFC*SSDVVKSCVPS Trigger: ACTTGGAACACAGCTCTTTACCACGTCCGATGAGCAGCAGAAGTTTCCCCAGAAGCCTGGATGACTCCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | TGGCCCTTCCCTTTCAGGTCTTGCCGAAGCTCATCAAAGTTCAGTTaGCCACCACCTTGCCGGAGACTCTCTGAGATGGCATCTACAGTG | + |
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Preference number: 6 (lower is better) Translates to: WPFPFRSCRSSSKFS*PPPCRRLSEMASTV Trigger: CACTGTAGATGCCATCTCAGAGAGTCTCCGGCAAGGTGGTGGCAAACTGAACTTTGATGAGCTTCGGCAAGACCTGAAAGGGAAGGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | AATGTTTGCGTTATACACCGAGAAGTCTATAAAAGCTaGCCGCGTGCCCCGGTCCAGCCAGAAGTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: NVCVIHREVYKS*PRAPVQPEVPP Trigger: AGGAGGAACTTCTGGCTGGACCGGGGCACGCGGGCAGCTTTTATAGACTTCTCGGTGTATAACGCAAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | GCTGAAGTCATCGACCTGGGTGCCGAAGACAAGGTATaGCAGCTGTGCGTATGCCAAGAAGATGATGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: AEVIDLGAEDKV*QLCVCQEDDGE Trigger: TTCTCCATCATCTTCTTGGCATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAGGTCGATGACTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | CCTTTCAGGTCTTGCCGAAGCTCATCAAAGTTCAGTTaGCCACCACCTTGCCGGAGACTCTCTGAGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: PFRSCRSSSKFS*PPPCRRLSEMA Trigger: TGCCATCTCAGAGAGTCTCCGGCAAGGTGGTGGCAAACTGAACTTTGATGAGCTTCGGCAAGACCTGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | CGTCTCTTCAGCTTGGCCCGCTCCATGATCTCCAGCTaGACAATCACGGCATCAATCTTGGAAACGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLFSLARSMISS*TITASILETML Trigger: CAGCATCGTTTCCAAGATTGATGCCGTGATTGTCAAGCTGGAGATCATGGAGCGGGCCAAGCTGAAGAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | AACACCTCTCGTCTCTTCAGCTTGGCCCGCTCCATGATCTCCAGCTaGACAATCACGGCATCAATCTTGGAAACGATGCTGCCAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: NTSRLFSLARSMISS*TITASILETMLPME Trigger: CTCCATTGGCAGCATCGTTTCCAAGATTGATGCCGTGATTGTCAAGCTGGAGATCATGGAGCGGGCCAAGCTGAAGAGACGAGAGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | CTGGGTGCCGAAGACAAGGTATGCCAGCTGTGCGTATaGCAAGAAGATGATGGAGAACATTATGGTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGAEDKVCQLCV*QEDDGEHYGEA Trigger: GGCTTCACCATAATGTTCTCCATCATCTTCTTGGCATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | AGCTCCCGTAACACACTTTTCAGGTACTTCTCTCGGTaGGCGTTGCTCTCTTCCATGAGTCTTGTTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSRNTLFRYFSR*ALLSSMSLVPQ Trigger: CTGGGGAACAAGACTCATGGAAGAGAGCAACGCCAACCGAGAGAAGTACCTGAAAAGTGTGTTACGGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | GCCAAGAAGATGATGGAGAACATTATGGTGAAGCCGAAGAGGTCTTaGGCACATCGAGACATGGTTGTGGAGAGCTGGCTCATGGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: AKKMMENIMVKPKRS*AHRDMVVESWLMVL Trigger: TAGGACCATGAGCCAGCTCTCCACAACCATGTCTCGATGTGCCAAAGACCTCTTCGGCTTCACCATAATGTTCTCCATCATCTTCTTGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS TCA 72 bp | GACCAGTGCTTTTTGGCAGCCCTTTCTGATAAGGTCTaGGAGTTCCATTTCTGCTTTCTGCTGGGCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: DQCFLAALSDKV*EFHFCFLLGQI Trigger: GATCTGGCCCAGCAGAAAGCAGAAATGGAACTCTCAGACCTTATCAGAAAGGGCTGCCAAAAAGCACTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | ATCGACCTGGGTGCCGAAGACAAGGTATGCCAGCTGTaGGTATGCCAAGAAGATGATGGAGAACATTATGGT | + |
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Preference number: 6 (lower is better) Translates to: IDLGAEDKVCQL*VCQEDDGEHYG Trigger: ACCATAATGTTCTCCATCATCTTCTTGGCATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAGGTCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | TGCCGAAGCTCATCAAAGTTCAGTTTGCCACCACCTTaGCGGAGACTCTCTGAGATGGCATCTACAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: CRSSSKFSLPPP*RRLSEMASTVF Trigger: AAACACTGTAGATGCCATCTCAGAGAGTCTCCGGCAAGGTGGTGGCAAACTGAACTTTGATGAGCTTCGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | CGTAACACACTTTTCAGGTACTTCTCTCGGTTGGCGTaGCTCTCTTCCATGAGTCTTGTTCCCCAGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: RNTLFRYFSRLA*LSSMSLVPQRP Trigger: AGGTCTCTGGGGAACAAGACTCATGGAAGAGAGCAACGCCAACCGAGAGAAGTACCTGAAAAGTGTGTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | ATGATGGAGAACATTATGGTGAAGCCGAAGAGGTCTTaGGCACATCGAGACATGGTTGTGGAGAGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: MMENIMVKPKRS*AHRDMVVESWL Trigger: GAGCCAGCTCTCCACAACCATGTCTCGATGTGCCAAAGACCTCTTCGGCTTCACCATAATGTTCTCCATCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 72 bp | AAGATACATTCTTGGAAAGTGCTGAAGTCATCGACCTaGGTGCCGAAGACAAGGTATGCCAGCTGTGCGTAT | + |
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Preference number: 6 (lower is better) Translates to: KIHSWKVLKSST*VPKTRYASCAY Trigger: ATACGCACAGCTGGCATACCTTGTCTTCGGCACCCAGGTCGATGACTTCAGCACTTTCCAAGAATGTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 72 bp | CCCAAAACTCGGTTAGCTTCCTCGATCTCTGCGAAGTaGATATCACCCAAAATGATGCGGAACTGGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PKTRLASSISAK*ISPKMMRNWVK Trigger: CTTCACCCAGTTCCGCATCATTTTGGGTGATATCAACTTCGCAGAGATCGAGGAAGCTAACCGAGTTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | GTGTCCGAGTGTAGTAGTACACATTGGAGCTCATCATaGCGTAGGTCAAGATGCACAAGACTACGAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VSECSSTHWSSS*RRSRCTRLRGK Trigger: TTTTCCTCGTAGTCTTGTGCATCTTGACCTACGGCATGATGAGCTCCAATGTGTACTACTACACTCGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CCA 72 bp | ATAGCTGTGACAGTGTCCGAGTGTAGTAGTACACATTaGAGCTCATCATGCCGTAGGTCAAGATGCACAAGA | + |
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Preference number: 6 (lower is better) Translates to: IAVTVSECSSTH*SSSCRRSRCTR Trigger: TCTTGTGCATCTTGACCTACGGCATGATGAGCTCCAATGTGTACTACTACACTCGGACACTGTCACAGCTAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | TTGAAGAGCTTAATCCAGACCAAAAATACCATGACAGCACTTATATaGTTGAACTGTATTTGCCAGTATGCCACATGCTCAAAGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LKSLIQTKNTMTALI*LNCICQYATCSKLG Trigger: CCCCAACTTTGAGCATGTGGCATACTGGCAAATACAGTTCAACAATATAAGTGCTGTCATGGTATTTTTGGTCTGGATTAAGCTCTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS CAA 90 bp | AAGAGCTTAATCCAGACCAAAAATACCATGACAGCACTTATATTGTaGAACTGTATTTGCCAGTATGCCACATGCTCAAAGTTGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: KSLIQTKNTMTALIL*NCICQYATCSKLGK Trigger: TTTCCCCAACTTTGAGCATGTGGCATACTGGCAAATACAGTTCAACAATATAAGTGCTGTCATGGTATTTTTGGTCTGGATTAAGCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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| CDS GCA 72 bp | GACAGCACTTATATTGTTGAACTGTATTTGCCAGTATaGCACATGCTCAAAGTTGGGGAAAGAATTTTGATC | + |
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Preference number: 6 (lower is better) Translates to: DSTYIVELYLPV*HMLKVGERILI Trigger: GATCAAAATTCTTTCCCCAACTTTGAGCATGTGGCATACTGGCAAATACAGTTCAACAATATAAGTGCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086831.4 |
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