Pregenerated sensors for PKD1L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048827Ensembl transcript IDs: ENSMUST00000057344.3, ENSMUST00000109242.8, ENSMUST00000212537.2, ENSMUST00000212545.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCTTCTCCTGGGCTGAGGATGGGGAAACTGGTGGAATGCCTGCATaGCCCTGGCCCTCTGCGGAGAGTCTGTGTCTCCAGGAGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PFSWAEDGETGGMPA*PWPSAESLCLQEFL Trigger: CAGGAACTCCTGGAGACACAGACTCTCCGCAGAGGGCCAGGGCCATGCAGGCATTCCACCAGTTTCCCCATCCTCAGCCCAGGAGAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 90 bp | TCCTGGGCTGAGGATGGGGAAACTGGTGGAATGCCTGCATGGCCCTaGCCCTCTGCGGAGAGTCTGTGTCTCCAGGAGTTCCTGGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: SWAEDGETGGMPAWP*PSAESLCLQEFLEV Trigger: AACCTCCAGGAACTCCTGGAGACACAGACTCTCCGCAGAGGGCCAGGGCCATGCAGGCATTCCACCAGTTTCCCCATCCTCAGCCCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 90 bp | GGGCCAGGCAGCCTGGATGAAAGGAAGCTGGGGCAGAGCTTCTGGTaGGTGAATCAACTGGAAGAGCCGCCCAAAGATGAGGTGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: GPGSLDERKLGQSFW*VNQLEEPPKDEVDG Trigger: CCCATCCACCTCATCTTTGGGCGGCTCTTCCAGTTGATTCACCCACCAGAAGCTCTGCCCCAGCTTCCTTTCATCCAGGCTGCCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | ATCACCTGGCTTACATACCAAGAAGGGCTGTCGCCAGAATTGTCATaGCACAGCCGAAGGCCATGCAGGTCCCCCAGCCAGGATCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: ITWLTYQEGLSPELS*HSRRPCRSPSQDPV Trigger: CACCGGATCCTGGCTGGGGGACCTGCATGGCCTTCGGCTGTGGCATGACAATTCTGGCGACAGCCCTTCTTGGTATGTAAGCCAGGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | GTGGTCCAGCCAGCGCCTCTGTTCCAGATGCTGCAGAACCCTGGTTaGCGCACTGTGGTTTCTTCCAAGCCTCACAACATAGCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VVQPAPLFQMLQNPG*RTVVSSKPHNIASS Trigger: GGAGGAGGCTATGTTGTGAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 90 bp | GGAGGAGAACAGGTGTCTGAAGGAAGAGAGCTCGCTTCTGGAGGCTaGTGTGAACACCCTGTCACGCTCACAGTTGCCCAAGTCCACGGC | + |
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Preference number: 5 (lower is better) Translates to: GGEQVSEGRELASGG*CEHPVTLTVAQVHG Trigger: GCCGTGGACTTGGGCAACTGTGAGCGTGACAGGGTGTTCACACCAGCCTCCAGAAGCGAGCTCTCTTCCTTCAGACACCTGTTCTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | AGGGGGCCAGGCAGCCTGGATGAAAGGAAGCTGGGGCAGAGCTTCTaGTGGGTGAATCAACTGGAAGAGCCGCCCAAAGATGAGGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: RGPGSLDERKLGQSF*WVNQLEEPPKDEVD Trigger: ATCCACCTCATCTTTGGGCGGCTCTTCCAGTTGATTCACCCACCAGAAGCTCTGCCCCAGCTTCCTTTCATCCAGGCTGCCTGGCCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | GGCTGCTGGATACAAGTGTGGCTGTTGTCACCTGTGGTGGGCTGCTaGATCCAGGTGTCTCTGATGTCCCCTGTGGTGGGCTGTTGGATG | + |
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Preference number: 5 (lower is better) Translates to: GCWIQVWLLSPVVGC*IQVSLMSPVVGCWM Trigger: CATCCAACAGCCCACCACAGGGGACATCAGAGACACCTGGATTCAGCAGCCCACCACAGGTGACAACAGCCACACTTGTATCCAGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | CAGGCAGCCTGGATGAAAGGAAGCTGGGGCAGAGCTTCTGGTGGGTaGATCAACTGGAAGAGCCGCCCAAAGATGAGGTGGATGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QAAWMKGSWGRASGG*INWKSRPKMRWMGK Trigger: CTTCCCCATCCACCTCATCTTTGGGCGGCTCTTCCAGTTGATTCACCCACCAGAAGCTCTGCCCCAGCTTCCTTTCATCCAGGCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | AGGGCTTTTGTGCAGTGGTCCAGCCAGCGCCTCTGTTCCAGATGCTaGAGAACCCTGGTTGCCGCACTGTGGTTTCTTCCAAGCCTCACA | + |
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Preference number: 5 (lower is better) Translates to: RAFVQWSSQRLCSRC*RTLVAALWFLPSLT Trigger: TGTGAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCACAAAAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 90 bp | AAGAGGGCTTTTGTGCAGTGGTCCAGCCAGCGCCTCTGTTCCAGATaGTGCAGAACCCTGGTTGCCGCACTGTGGTTTCTTCCAAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: KRAFVQWSSQRLCSR*CRTLVAALWFLPSL Trigger: GAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCACAAAAGCCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 90 bp | AGCCGCCCAAAGATGAGGTGGATGGGGAAGAGGATGATGGAGGTCTaGATGCTGACGAGCAGCTCCGACAAGGTCACAGCAAGTGGACCT | + |
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Preference number: 5 (lower is better) Translates to: SRPKMRWMGKRMMEV*MLTSSSDKVTASGP Trigger: AGGTCCACTTGCTGTGACCTTGTCGGAGCTGCTCGTCAGCATCCAGACCTCCATCATCCTCTTCCCCATCCACCTCATCTTTGGGCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | TGCAGTGGTCCAGCCAGCGCCTCTGTTCCAGATGCTGCAGAACCCTaGTTGCCGCACTGTGGTTTCTTCCAAGCCTCACAACATAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CSGPASASVPDAAEP*LPHCGFFQASQHSL Trigger: GAGGCTATGTTGTGAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 90 bp | GCTGCTCAACATCAGAGTAGCAGAGGGAGAGGCCAGGGTCACTGCTaGCTGAGGGCACAGACTCTGCTGGCAAAATGCTCTGTGGATCTC | + |
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Preference number: 5 (lower is better) Translates to: AAQHQSSRGRGQGHC*LRAQTLLAKCSVDL Trigger: GAGATCCACAGAGCATTTTGCCAGCAGAGTCTGTGCCCTCAGTCAGCAGTGACCCTGGCCTCTCCCTCTGCTACTCTGATGTTGAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | GGCTGCTGGATACAAGTGTGGCTGTTGTCACCTGTGTTGGGCTGCTaGATCCAGGTGTGTCTGATGTCCCCTGTGGTGGGCTATTGGATG | + |
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Preference number: 5 (lower is better) Translates to: GCWIQVWLLSPVLGC*IQVCLMSPVVGYWM Trigger: CATCCAATAGCCCACCACAGGGGACATCAGACACACCTGGATTCAGCAGCCCAACACAGGTGACAACAGCCACACTTGTATCCAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | TGCTGGGGCAGTGTAGATGGGATTGTTCTTGTCTCTCAAGCCAGGTaGCGACCAAGGACACTTTGCCCAAAGTGCTACGATTCTCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: CWGSVDGIVLVSQAR*RPRTLCPKCYDSPG Trigger: GCCCGGAGAATCGTAGCACTTTGGGCAAAGTGTCCTTGGTCGGCACCTGGCTTGAGAGACAAGAACAATCCCATCTACACTGCCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 90 bp | AAGCAGGAAGCCCCTGAGGTGGGTGACTGCAGAGTTCACTCTCAGTaGCTCGTAGAAACTGATGAACCTGTCCCGGTCACAGTGGTACTG | + |
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Preference number: 5 (lower is better) Translates to: KQEAPEVGDCRVHSQ*LVETDEPVPVTVVL Trigger: CAGTACCACTGTGACCGGGACAGGTTCATCAGTTTCTACGAGGCACTGAGAGTGAACTCTGCAGTCACCCACCTCAGGGGCTTCCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 90 bp | CCGCACAGTTGCGAAGAGAAGCAGGAAGCCCCTGAGGTGGGTGACTaGAGAGTTCACTCTCAGTGCCTCGTAGAAACTGATGAACCTGTC | + |
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Preference number: 5 (lower is better) Translates to: PHSCEEKQEAPEVGD*RVHSQCLVETDEPV Trigger: GACAGGTTCATCAGTTTCTACGAGGCACTGAGAGTGAACTCTGCAGTCACCCACCTCAGGGGCTTCCTGCTTCTCTTCGCAACTGTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 90 bp | CAGCACCCACGTGTACTCCTCATCTTTCTGCCACACTTGGTCCCTTaGCAGGCTGATGTTGAGATAGAAGTGAGTGTGGGCCAGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: QHPRVLLIFLPHLVP*QADVEIEVSVGQLV Trigger: GACCAGCTGGCCCACACTCACTTCTATCTCAACATCAGCCTGCCAAGGGACCAAGTGTGGCAGAAAGATGAGGAGTACACGTGGGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | GTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTaGTGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VGCWMQVCLMSCLLG*WMQVCLMSCLLGCW Trigger: CCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | AGCCCTCCTCCGATAGCCAGTGTAGACCTGGATAAGGTAGTGGGATaGAGAGCTGGGGTCATTGTCAGCCAGGACTGTTACCTTCACCTT | + |
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Preference number: 5 (lower is better) Translates to: SPPPIASVDLDKVVG*RAGVIVSQDCYLHL Trigger: AAGGTGAAGGTAACAGTCCTGGCTGACAATGACCCCAGCTCTGCATCCCACTACCTTATCCAGGTCTACACTGGCTATCGGAGGAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | ACACTGTTTCTTCATTCAGGAAGCTTTTTAGGAAACCCCGAAGCTTaGGGTTCCACGTGTGGGCTAGGCGTCCTCTCTGGGCGTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: TLFLHSGSFLGNPEA*GSTCGLGVLSGRGS Trigger: ACTGCCACGCCCAGAGAGGACGCCTAGCCCACACGTGGAACCCCAAGCTTCGGGGTTTCCTAAAAAGCTTCCTGAATGAAGAAACAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | ACCGTCCTCGGCACGATGAAGAAGTCGCTGCTGAAGAAGGTCAGGTaGTCACAGAGACACTGTGTCTTTAAAATGGTGCTCTTCGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: TVLGTMKKSLLKKVR*SQRHCVFKMVLFGP Trigger: GGGGCCGAAGAGCACCATTTTAAAGACACAGTGTCTCTGTGACCACCTGACCTTCTTCAGCAGCGACTTCTTCATCGTGCCGAGGACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | AGGAGGCTGGACAGCAATGACACCCCGACAGGGTTGTTGGTCACATaGAGAAGCAGTTTGATGGTGTTTTCTACATCCACCGTCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: RRLDSNDTPTGLLVT*RSSLMVFSTSTVLG Trigger: GCCGAGGACGGTGGATGTAGAAAACACCATCAAACTGCTTCTTCATGTGACCAACAACCCTGTCGGGGTGTCATTGCTGTCCAGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | CTGATGAACCTGTCCCGGTCACAGTGGTACTGCTGCATCTTTTTGTaGAGTAGAGAGAGGCTCTGCATGCTGAGGCCCAGGATGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LMNLSRSQWYCCIFL*SRERLCMLRPRMLK Trigger: CTTCAGCATCCTGGGCCTCAGCATGCAGAGCCTCTCTCTACTTCACAAAAAGATGCAGCAGTACCACTGTGACCGGGACAGGTTCATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 90 bp | CACTCCGTAGCTGGATGTCACTTTGAATTTCCGATCCCCCTGCACTaGTCCCAAATGCATTGTGTGCTCCGTCCATGGGGTGCTGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: HSVAGCHFEFPIPLH*SQMHCVLRPWGAVP Trigger: TGGAACAGCACCCCATGGACGGAGCACACAATGCATTTGGGATCAGTGCAGGGGGATCGGAAATTCAAAGTGACATCCAGCTACGGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109242.8 |
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| CDS GCA 90 bp | TTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTaGTGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGCWMQVCLMSCLLG*WMQVCLMSCLLGCW Trigger: CCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | GTGCCGCCTCTGTACTTTTATTCTCCACAGCCATTATGTAGTAGGTaGCAGTCCCGTACCACAGGTTCTCTGGTGTCAGCACCCACGTGT | + |
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Preference number: 5 (lower is better) Translates to: VPPLYFYSPQPLCSR*QSRTTGSLVSAPTC Trigger: ACACGTGGGTGCTGACACCAGAGAACCTGTGGTACGGGACTGGCACCTACTACATAATGGCTGTGGAGAATAAAAGTACAGAGGCGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | GGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTGCTaGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTGCTGGATG | + |
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Preference number: 5 (lower is better) Translates to: GCWMQVCLMSCLLGC*MQVCLMSCLLGCWM Trigger: CATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | CACAGCCATTATGTAGTAGGTGCCAGTCCCGTACCACAGGTTCTCTaGTGTCAGCACCCACGTGTACTCCTCATCTTTCTGCCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: HSHYVVGASPVPQVL*CQHPRVLLIFLPHL Trigger: CAAGTGTGGCAGAAAGATGAGGAGTACACGTGGGTGCTGACACCAGAGAACCTGTGGTACGGGACTGGCACCTACTACATAATGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | AGCAACTGCTCACTCAGGTCAATGAGTAAATTGGCCACACTGACCTaGGCTGATGTGGGAGAAGTCGGCAGGAAGTCTCTCAGTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SNCSLRSMSKLATLT*ADVGEVGRKSLSLW Trigger: CCAGAGACTGAGAGACTTCCTGCCGACTTCTCCCACATCAGCTCAGGTCAGTGTGGCCAATTTACTCATTGACCTGAGTGAGCAGTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057344.3 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | ATTGTATCGGTCCCAGAAATAGCACTGGGTGACAGCTGTGACCACTaGGACCAGGACGGGTGTGTGCTGTGCCGCCTCTGTACTTTTATT | + |
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Preference number: 5 (lower is better) Translates to: IVSVPEIALGDSCDH*DQDGCVLCRLCTFI Trigger: AATAAAAGTACAGAGGCGGCACAGCACACACCCGTCCTGGTCTCAGTGGTCACAGCTGTCACCCAGTGCTATTTCTGGGACCGATACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | AAGAAGGAGCCAGCAGCTGCACTTCAACCATCTGAACAGGCAAAATaGCATGGGCTTCTTCCCTTCTCCTGGGCTGAGGATGGGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: KKEPAAALQPSEQAK*HGLLPFSWAEDGET Trigger: AGTTTCCCCATCCTCAGCCCAGGAGAAGGGAAGAAGCCCATGTCATTTTGCCTGTTCAGATGGTTGAAGTGCAGCTGCTGGCTCCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 90 bp | AGGAAGAGGATTTGCACCAGAGTACCACCCGTCAGCTTGGAGAGCTaGTTCTTCCAGGCCTTCCTTGTAGGCTTGGCTAGGTTGTTCATT | + |
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Preference number: 5 (lower is better) Translates to: RKRICTRVPPVSLES*FFQAFLVGLARLFI Trigger: AATGAACAACCTAGCCAAGCCTACAAGGAAGGCCTGGAAGAAGCAGCTCTCCAAGCTGACGGGTGGTACTCTGGTGCAAATCCTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 90 bp | TCATCCTGTGTGTGGCTTTTGGAGGTGCTGAAGAAGCTGGGTCAATaGGAAAGCACAATGTCTCAAAAAGCTCAGGAGGAGCGGGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SSCVWLLEVLKKLGQ*ESTMSQKAQEERVG Trigger: ACCAACCCGCTCCTCCTGAGCTTTTTGAGACATTGTGCTTTCCCATTGACCCAGCTTCTTCAGCACCTCCAAAAGCCACACACAGGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | TTAGCATTGAAGACCGTGAATTCTACAAAGAGGGCTTTTGTGCAGTaGTCCAGCCAGCGCCTCTGTTCCAGATGCTGCAGAACCCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LALKTVNSTKRAFVQ*SSQRLCSRCCRTLV Trigger: AACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCACAAAAGCCCTCTTTGTAGAATTCACGGTCTTCAATGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 90 bp | TCTGATTTATCCCTGGATGCGATCCGGGCAGCGTCAGGTTTCCCCTaGCCCACCACACTGTTTCTTCATTCAGGAAGCTTTTTAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SDLSLDAIRAASGFP*PTTLFLHSGSFLGN Trigger: GTTTCCTAAAAAGCTTCCTGAATGAAGAAACAGTGTGGTGGGTCAGGGGAAACCTGACGCTGCCCGGATCGCATCCAGGGATAAATCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | AGCCTGGCAAATGAAATGATGCTTCTCTATGCACAGGTTCCATCTTaGGAAGACAGCATTAGAGTGTGTGACCACGGAAGGGCACTCGCC | + |
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Preference number: 5 (lower is better) Translates to: SLANEMMLLYAQVPS*EDSIRVCDHGRALA Trigger: GGCGAGTGCCCTTCCGTGGTCACACACTCTAATGCTGTCTTCTCAAGATGGAACCTGTGCATAGAGAAGCATCATTTCATTTGCCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 90 bp | CCGGGCGTGTTGTTCCTTGTCTTTGTTAAGCCACGGCATGTGGTTTaGCATCAGGGAGAACAACAATGTCAGGAAGATGACCTTTATCGG | + |
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Preference number: 5 (lower is better) Translates to: PGVLFLVFVKPRHVV*HQGEQQCQEDDLYR Trigger: CCGATAAAGGTCATCTTCCTGACATTGTTGTTCTCCCTGATGGCAAACCACATGCCGTGGCTTAACAAAGACAAGGAACAACACGCCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 90 bp | TTCTGGAAGCCCACATGGCTAAGAGGATATAGAATCCTAGGAGGCTaGACAGCAATGACACCCCGACAGGGTTGTTGGTCACATGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: FWKPTWLRGYRILGG*TAMTPRQGCWSHEE Trigger: TTCTTCATGTGACCAACAACCCTGTCGGGGTGTCATTGCTGTCCAGCCTCCTAGGATTCTATATCCTCTTAGCCATGTGGGCTTCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | TGGAAATGCCATTTCTTCCTCGTGGTCATGTCACTGACGATCACCTaGCTTACATACCAAGAAGGGCTGTCGCCAGAATTGTCATGCCAC | + |
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Preference number: 5 (lower is better) Translates to: WKCHFFLVVMSLTIT*LTYQEGLSPELSCH Trigger: GTGGCATGACAATTCTGGCGACAGCCCTTCTTGGTATGTAAGCCAGGTGATCGTCAGTGACATGACCACGAGGAAGAAATGGCATTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | TGGATGGGTAGAGATGACTCCCAGGGGAGAGTCTTCCTGTGCCTTTaGAGTGATGTTTGCCAAAGATCTTCCAGCAGGTATTGTGGATTC | + |
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Preference number: 5 (lower is better) Translates to: WMGRDDSQGRVFLCL*SDVCQRSSSRYCGF Trigger: GAATCCACAATACCTGCTGGAAGATCTTTGGCAAACATCACTTCAAAGGCACAGGAAGACTCTCCCCTGGGAGTCATCTCTACCCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS TCA 90 bp | CCTCTGGACTCGTGTAAACTGGTTCCAGGGATGTCGAGTTGCAACTaGGAGCCACAGATAATCCTGGGTGAACTTTTCTACGATTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLDSCKLVPGMSSCN*EPQIILGELFYDCG Trigger: TCCACAATCGTAGAAAAGTTCACCCAGGATTATCTGTGGCTCTCAGTTGCAACTCGACATCCCTGGAACCAGTTTACACGAGTCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | TCACAGAGACACTGTGTCTTTAAAATGGTGCTCTTCGGCCCCACTTaGCATCCATCGCTCTTCCATGTCCTATTGTATCGGTCCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQRHCVFKMVLFGPT*HPSLFHVLLYRSQK Trigger: TTTCTGGGACCGATACAATAGGACATGGAAGAGCGATGGATGCCAAGTGGGGCCGAAGAGCACCATTTTAAAGACACAGTGTCTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | CCAGGACTGTTACCTTCACCTTCTGCATATCTTCTCGATCCTTTCTaGAAGCCCACATGGCTAAGAGGATATAGAATCCTAGGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLLPSPSAYLLDPF*KPTWLRGYRILGGW Trigger: CCAGCCTCCTAGGATTCTATATCCTCTTAGCCATGTGGGCTTCCAGAAAGGATCGAGAAGATATGCAGAAGGTGAAGGTAACAGTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 90 bp | AGCATGTCTTCAACCTCAAACTCACTCCGTAGCTGGATGTCACTTTaGATTTCCGATCCCCCTGCACTGATCCCAAATGCATTGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMSSTSNSLRSWMSL*ISDPPALIPNALCA Trigger: AGCACACAATGCATTTGGGATCAGTGCAGGGGGATCGGAAATTCAAAGTGACATCCAGCTACGGAGTGAGTTTGAGGTTGAAGACATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109242.8 |
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| CDS CCA 90 bp | ATTCTCCGGGCGTGTTGTTCCTTGTCTTTGTTAAGCCACGGCATGTaGTTTGCCATCAGGGAGAACAACAATGTCAGGAAGATGACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILRACCSLSLLSHGM*FAIRENNNVRKMTF Trigger: AAAGGTCATCTTCCTGACATTGTTGTTCTCCCTGATGGCAAACCACATGCCGTGGCTTAACAAAGACAAGGAACAACACGCCCGGAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 90 bp | TTGTCATCCAAAGTCTTAAAAGGGTTGAAAGCCAGACCTGTCACTTaGAGGTTCACGCCTGGGTGTTTGTTCAAGAGCTCCTTCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSKVLKGLKARPVT*RFTPGCLFKSSFRA Trigger: AGCTCTGAAGGAGCTCTTGAACAAACACCCAGGCGTGAACCTTCAAGTGACAGGTCTGGCTTTCAACCCTTTTAAGACTTTGGATGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 90 bp | AGATTTGAGGAACCAGTGTTGTCAGCGTGTTCCTCAGATGGATTCTaGTGCAGGCGGATTCCTAACAGACTTGAGAGCTTTTGTAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RFEEPVLSACSSDGF*CRRIPNRLESFCSN Trigger: GTTACTACAAAAGCTCTCAAGTCTGTTAGGAATCCGCCTGCACCAGAATCCATCTGAGGAACACGCTGACAACACTGGTTCCTCAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 90 bp | ACCAAAAGGGAGCCCAGGATTGGGTATAGAGCAATAACCTCCTTGTaGTTTGAAGTTCCCATCAAGAGGCCAACAACAGTCACTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TKREPRIGYRAITSL*FEVPIKRPTTVTID Trigger: ATCTATAGTGACTGTTGTTGGCCTCTTGATGGGAACTTCAAAGCACAAGGAGGTTATTGCTCTATACCCAATCCTGGGCTCCCTTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 90 bp | TTTGAGGAACCAGTGTTGTCAGCGTGTTCCTCAGATGGATTCTGGTaGAGGCGGATTCCTAACAGACTTGAGAGCTTTTGTAGTAACATA | + |
|
Preference number: 5 (lower is better) Translates to: FEEPVLSACSSDGFW*RRIPNRLESFCSNI Trigger: TATGTTACTACAAAAGCTCTCAAGTCTGTTAGGAATCCGCCTGCACCAGAATCCATCTGAGGAACACGCTGACAACACTGGTTCCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | TGGGCTGAGGATGGGGAAACTGGTGGAATGCCTGCATaGCCCTGGCCCTCTGCGGAGAGTCTGTGTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WAEDGETGGMPA*PWPSAESLCLQ Trigger: CTGGAGACACAGACTCTCCGCAGAGGGCCAGGGCCATGCAGGCATTCCACCAGTTTCCCCATCCTCAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | ATGCAGGTGTCTCTGATGTCCCCTGTGGTGGGCTGCTaGATGCAGGTGTGTCTGATGTCCCCTGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MQVSLMSPVVGC*MQVCLMSPVVG Trigger: GCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGGGACATCAGAGACACCTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | GGGCTGCTGAATCCAGGTGTCTCTGATGTCCCCTGTGGTGGGCTGTaGGATGCAGGTGTCTCTGATGTCCCCTGTGGTGGGCTGCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLLNPGVSDVPCGGL*DAGVSDVPCGGLLD Trigger: ATCCAGCAGCCCACCACAGGGGACATCAGAGACACCTGCATCCAACAGCCCACCACAGGGGACATCAGAGACACCTGGATTCAGCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TGTCCCCTGTGGTGGGCTGCTAGATGCAGATGTGGCTaGTGTCACCTGTGGTGGGCTGCTGGATGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CPLWWAARCRCG*CHLWWAAGCRC Trigger: ACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGCCACATCTGCATCTAGCAGCCCACCACAGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TGTCACCTGTGGTGGGCTGCTGGATGCAGGTGTCTCTaGTGTCACCTGTGGTGGGCTGCTGGATGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CHLWWAAGCRCL*CHLWWAAGCRC Trigger: ACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCACCACAGGTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | TGGATGCAGGTGTCTCTGATGTCCCCTGTGGTGGGCTaGTGGATGCAGGTGTGTCTGATGTCCCCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WMQVSLMSPVVG*WMQVCLMSPVV Trigger: CACCACAGGGGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGGGACATCAGAGACACCTGCATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | GTGCAGTGGTCCAGCCAGCGCCTCTGTTCCAGATGCTaGAGAACCCTGGTTGCCGCACTGTGGTTTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VQWSSQRLCSRC*RTLVAALWFLP Trigger: TGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | ATCCAGGTGTCTCTGATGTCCCCTGTGGTGGGCTGTTaGATGCAGGTGTCTCTGATGTCCCCTGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IQVSLMSPVVGC*MQVSLMSPVVG Trigger: GCCCACCACAGGGGACATCAGAGACACCTGCATCCAACAGCCCACCACAGGGGACATCAGAGACACCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | GCCGAAGGCCATGCAGGTCCCCCAGCCAGGATCCGGTaGAAAGAAGGAAAACATCCAGTGCTCCACGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: AEGHAGPPARIR*KEGKHPVLHAQ Trigger: TTGAGCGTGGAGCACTGGATGTTTTCCTTCTTTCCACCGGATCCTGGCTGGGGGACCTGCATGGCCTTCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | CTGGAGGCTGGTGTGAACACCCTGTCACGCTCACAGTaGCCCAAGTCCACGGCCAGCCAACAATTGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LEAGVNTLSRSQ*PKSTASQQLHW Trigger: CCAGTGCAATTGTTGGCTGGCCGTGGACTTGGGCAACTGTGAGCGTGACAGGGTGTTCACACCAGCCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | CTGACGATCACCTGGCTTACATACCAAGAAGGGCTGTCGCCAGAATaGTCATGCCACAGCCGAAGGCCATGCAGGTCCCCCAGCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LTITWLTYQEGLSPE*SCHSRRPCRSPSQD Trigger: ATCCTGGCTGGGGGACCTGCATGGCCTTCGGCTGTGGCATGACAATTCTGGCGACAGCCCTTCTTGGTATGTAAGCCAGGTGATCGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | AGTGGTCCAGCCAGCGCCTCTGTTCCAGATGCTGCAGAACCCTGGTaGCCGCACTGTGGTTTCTTCCAAGCCTCACAACATAGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGPASASVPDAAEPW*PHCGFFQASQHSLL Trigger: GAGGAGGCTATGTTGTGAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 72 bp | TGTCACCTGTGGTGGGCTGCTGAATCCAGGTGTCTCTaGTGTCCCCTGTGGTGGGCTGTTGGATGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CHLWWAAESRCL*CPLWWAVGCRC Trigger: ACACCTGCATCCAACAGCCCACCACAGGGGACATCAGAGACACCTGGATTCAGCAGCCCACCACAGGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | CTTACATACCAAGAAGGGCTGTCGCCAGAATTGTCATaGCACAGCCGAAGGCCATGCAGGTCCCCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTYQEGLSPELS*HSRRPCRSPSQ Trigger: CTGGCTGGGGGACCTGCATGGCCTTCGGCTGTGGCATGACAATTCTGGCGACAGCCCTTCTTGGTATGTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | ATGAAGGTGTGTCTAATGTCCCCTGTGGTGGGCTGCTaGATGCAGGTGTGTCTGATGTCCCCTGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MKVCLMSPVVGC*MQVCLMSPVVG Trigger: GCCCACCACAGGGGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGGGACATTAGACACACCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | AATCCAGGTGTCTCTGATGTCCCCTGTGGTGGGCTGTaGGATGCAGGTGTCTCTGATGTCCCCTGTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NPGVSDVPCGGL*DAGVSDVPCGG Trigger: CCCACCACAGGGGACATCAGAGACACCTGCATCCAACAGCCCACCACAGGGGACATCAGAGACACCTGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | ACCTGGCTTACATACCAAGAAGGGCTGTCGCCAGAATaGTCATGCCACAGCCGAAGGCCATGCAGGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TWLTYQEGLSPE*SCHSRRPCRSP Trigger: GGGGGACCTGCATGGCCTTCGGCTGTGGCATGACAATTCTGGCGACAGCCCTTCTTGGTATGTAAGCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | AGCAGGGTCAGGAAGAGGATTTGCACCAGAGTACCACCCGTCAGCTaGGAGAGCTGCTTCTTCCAGGCCTTCCTTGTAGGCTTGGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRVRKRICTRVPPVS*ESCFFQAFLVGLAR Trigger: CCTAGCCAAGCCTACAAGGAAGGCCTGGAAGAAGCAGCTCTCCAAGCTGACGGGTGGTACTCTGGTGCAAATCCTCTTCCTGACCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 72 bp | ATACAAGTGTGGCTGTTGTCACCTGTGGTGGGCTGCTaGATCCAGGTGTCTCTGATGTCCCCTGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IQVWLLSPVVGC*IQVSLMSPVVG Trigger: GCCCACCACAGGGGACATCAGAGACACCTGGATTCAGCAGCCCACCACAGGTGACAACAGCCACACTTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TGTCCCCTGTGGTGGGCTATTGGATGCAGGTGTGTCTaGTGTCACCTGTGTTGGGCTGCTGGATGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CPLWWAIGCRCV*CHLCWAAGCRC Trigger: ACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCCCACCACAGGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | TGGATGCAGGTGTGTCTGATGTCACCTGTGGTGGGCTaGTGGATGCAGGTGTGTCTGATGTCACCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WMQVCLMSPVVG*WMQVCLMSPVV Trigger: CACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACACCTGCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | TGGATGCAGGTGTCTCTGATGTCACCTGTGGTGGGCTaGTGGATGCAGGTGTGTCTGATGTCACCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WMQVSLMSPVVG*WMQVCLMSPVV Trigger: CACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | TTTGTGCAGTGGTCCAGCCAGCGCCTCTGTTCCAGATaGTGCAGAACCCTGGTTGCCGCACTGTGGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FVQWSSQRLCSR*CRTLVAALWFL Trigger: AAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | ATGCAGATGTGTCTGATGTCACCTGTGGTGGGCTGCTaGATGCAGGTGTCTCTGATGTCACCTGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MQMCLMSPVVGC*MQVSLMSPVVG Trigger: GCCCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACATCTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | CAGGTGTCTGAAGGAAGAGAGCTCGCTTCTGGAGGCTaGTGTGAACACCCTGTCACGCTCACAGTTGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QVSEGRELASGG*CEHPVTLTVAQ Trigger: TTGGGCAACTGTGAGCGTGACAGGGTGTTCACACCAGCCTCCAGAAGCGAGCTCTCTTCCTTCAGACACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | GCCATGCAGCAGGAGAGCCTCTGGACTCGTGTAAACTaGTTCCAGGGATGTCGAGTTGCAACTGAGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AMQQESLWTRVN*FQGCRVATESH Trigger: GTGGCTCTCAGTTGCAACTCGACATCCCTGGAACCAGTTTACACGAGTCCAGAGGCTCTCCTGCTGCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | TTCCAAGCCTCACAACATAGCCTCCTCCTGAGTAAGTaGCTAGCTCCCCTTGGATGGGATAGCCTCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: FQASQHSLLLSK*LAPLGWDSLPA Trigger: CGCTGGGAGGCTATCCCATCCAAGGGGAGCTAGCCACTTACTCAGGAGGAGGCTATGTTGTGAGGCTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 72 bp | GGCTGCTGGATGCAGGTGTCTCTGATGTCACCTGTGTaGGGCTGCTGGATGCAGGTGTCTCTGATGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GCWMQVSLMSPV*GCWMQVSLMSP Trigger: AGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGAGACACCTGCATCCAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | GCCAGCGCCTCTGTTCCAGATGCTGCAGAACCCTGGTaGCCGCACTGTGGTTTCTTCCAAGCCTCACAACAT | + |
|
Preference number: 6 (lower is better) Translates to: ASASVPDAAEPW*PHCGFFQASQH Trigger: ATGTTGTGAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 72 bp | TCCCTGGATGCGATCCGGGCAGCGTCAGGTTTCCCCTaGCCCACCACACTGTTTCTTCATTCAGGAAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLDAIRAASGFP*PTTLFLHSGSF Trigger: AAAGCTTCCTGAATGAAGAAACAGTGTGGTGGGTCAGGGGAAACCTGACGCTGCCCGGATCGCATCCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS TCA 72 bp | TGTCACCTGTGTTGGGCTGCTGAATCCAGGTGTGTCTaGTGTCCCCTGTGGTGGGCTATTGGATGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CHLCWAAESRCV*CPLWWAIGCRC Trigger: ACACCTGCATCCAATAGCCCACCACAGGGGACATCAGACACACCTGGATTCAGCAGCCCAACACAGGTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS TCA 72 bp | TGTCATGTTTGTTGGGCTGCTGGATGCAGGTGTCTCTaGTGTCACCTGTGGTGGGCTGCTGGATGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CHVCWAAGCRCL*CHLWWAAGCRC Trigger: ACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACAAACATGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | AACAGGCCATGGTGGGCTGCTGGATGCAGGTGTGTCTaGTGTCATGTTTGTTGGGCTGCTGGATGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NRPWWAAGCRCV*CHVCWAAGCRC Trigger: ACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCACCATGGCCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TGGGTGTTTGTTCAAGAGCTCCTTCAGAGCTTCTGCTaGCGGGAAGCCCAAAGTCAAGGGTGCAGGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: WVFVQELLQSFC*REAQSQGCRLT Trigger: GGTGAGCCTGCACCCTTGACTTTGGGCTTCCCGTCAGCAGAAGCTCTGAAGGAGCTCTTGAACAAACACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TGGATGAAAGGAAGCTGGGGCAGAGCTTCTGGTGGGTaGATCAACTGGAAGAGCCGCCCAAAGATGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WMKGSWGRASGG*INWKSRPKMRW Trigger: CCACCTCATCTTTGGGCGGCTCTTCCAGTTGATTCACCCACCAGAAGCTCTGCCCCAGCTTCCTTTCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | CTGTCCCGGTCACAGTGGTACTGCTGCATCTTTTTGTaGAGTAGAGAGAGGCTCTGCATGCTGAGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRSQWYCCIFL*SRERLCMLRPR Trigger: CCTGGGCCTCAGCATGCAGAGCCTCTCTCTACTTCACAAAAAGATGCAGCAGTACCACTGTGACCGGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
||
| CDS GCA 72 bp | TGGATGCAGGTGTCTCTGATGTCACCTGTGGTGGGCTaGTGGATACAAGTGTGGCTGTTGTCACCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WMQVSLMSPVVG*WIQVWLLSPVV Trigger: CACCACAGGTGACAACAGCCACACTTGTATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS GCA 72 bp | ATTTGCACCAGAGTACCACCCGTCAGCTTGGAGAGCTaGTTCTTCCAGGCCTTCCTTGTAGGCTTGGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: ICTRVPPVSLES*FFQAFLVGLAR Trigger: CCTAGCCAAGCCTACAAGGAAGGCCTGGAAGAAGCAGCTCTCCAAGCTGACGGGTGGTACTCTGGTGCAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 72 bp | CCAGCGCCTCTGTTCCAGATGCTGCAGAACCCTGGTTaGCGCACTGTGGTTTCTTCCAAGCCTCACAACATA | + |
|
Preference number: 6 (lower is better) Translates to: PAPLFQMLQNPG*RTVVSSKPHNI Trigger: TATGTTGTGAGGCTTGGAAGAAACCACAGTGCGGCAACCAGGGTTCTGCAGCATCTGGAACAGAGGCGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
||
| CDS CCA 72 bp | ATCCAGGTGTGTCTGATGTCCCCTGTGGTGGGCTATTaGATGCAGGTGTGTCTGATGTCACCTGTGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IQVCLMSPVVGY*MQVCLMSPVLG Trigger: GCCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCCCACCACAGGGGACATCAGACACACCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS CCA 72 bp | ATGCAGGTGTCTCTGATGTCACCTGTGGTGGGCTGCTaGATGCAGGTGTGTCTGATATTACCTGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MQVSLMSPVVGC*MQVCLILPVVG Trigger: GCCCACCACAGGTAATATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS CAA 72 bp | AGGAAGAGGATTTGCACCAGAGTACCACCCGTCAGCTaGGAGAGCTGCTTCTTCCAGGCCTTCCTTGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKRICTRVPPVS*ESCFFQAFLVG Trigger: GCCTACAAGGAAGGCCTGGAAGAAGCAGCTCTCCAAGCTGACGGGTGGTACTCTGGTGCAAATCCTCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
||
| CDS CAA 72 bp | CCAGCCAGCCCCATAGTTCTCTCTGTCCTCCTGATGTaGGGGAGGCGACTTCATTTGCTTGTGGAGAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: PASPIVLSVLLM*GRRLHLLVERS Trigger: GGATCTCTCCACAAGCAAATGAAGTCGCCTCCCCAACATCAGGAGGACAGAGAGAACTATGGGGCTGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
||
| CDS CAA 90 bp | GCCATGGTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTaGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AMVGCWMQVCLMSCL*GCWMQVCLMSCLLG Trigger: GCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCACCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TTGGACAGTGTCTTGTTGATGACCTGTAACTGGGCATaGTGTCGCAGTAGGTCCCAGACCCGCACAGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LDSVLLMTCNWA*CRSRSQTRTVA Trigger: CGCAACTGTGCGGGTCTGGGACCTACTGCGACATCATGCCCAGTTACAGGTCATCAACAAGACACTGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
||
| CDS GCA 72 bp | TGGATGCAGGTGTGTCTGATGTCACCTGTGTTGGGCTaGTGGATGCAGGTGTCTCTGATGTCACCTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WMQVCLMSPVLG*WMQVSLMSPVL Trigger: CAACACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGACACACCTGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS GCA 72 bp | CCGATAGCCAGTGTAGACCTGGATAAGGTAGTGGGATaGAGAGCTGGGGTCATTGTCAGCCAGGACTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PIASVDLDKVVG*RAGVIVSQDCY Trigger: GTAACAGTCCTGGCTGACAATGACCCCAGCTCTGCATCCCACTACCTTATCCAGGTCTACACTGGCTATCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS CCA 72 bp | CTGGAATTCACTGTGGGCTTGGAAATCAGGAATTGTTaGGACCCGTTCCCCTGCTGTCTCATCCAAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LEFTVGLEIRNC*DPFPCCLIQGL Trigger: CAGGCCTTGGATGAGACAGCAGGGGAACGGGTCCCAACAATTCCTGATTTCCAAGCCCACAGTGAATTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | GCTTGGCTAGGTTGTTCATTGCTGGGGCAGTGTAGATaGGATTGTTCTTGTCTCTCAAGCCAGGTGCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: AWLGCSLLGQCR*DCSCLSSQVPT Trigger: GGTCGGCACCTGGCTTGAGAGACAAGAACAATCCCATCTACACTGCCCCAGCAATGAACAACCTAGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
||
| CDS CAA 72 bp | GGCTATTGGATGCAGGTGTGTCTGATGTCACCTGTGTaGGGCTGCTGGATGCAGGTGTCTCTGATGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GYWMQVCLMSPV*GCWMQVSLMSP Trigger: AGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS CAA 72 bp | AATCCAGGTGTGTCTGATGTCCCCTGTGGTGGGCTATaGGATGCAGGTGTGTCTGATGTCACCTGTGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NPGVSDVPCGGL*DAGVSDVTCVG Trigger: CCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCCCACCACAGGGGACATCAGACACACCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | GTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTaGTTGGGCTGCTGGATGCAGGTGTGTCTGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VGCWMQVCLMSC*LGCWMQVCLMS Trigger: TGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | CGCTCACAGTTGCCCAAGTCCACGGCCAGCCAACAATaGCACTGGAAATGCCATTTCTTCCTCGTGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: RSQLPKSTASQQ*HWKCHFFLVVM Trigger: CATGACCACGAGGAAGAAATGGCATTTCCAGTGCAATTGTTGGCTGGCCGTGGACTTGGGCAACTGTGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | TCTTGTCTCTCAAGCCAGGTGCCGACCAAGGACACTTaGCCCAAAGTGCTACGATTCTCCGGGCGTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SCLSSQVPTKDT*PKVLRFSGRVV Trigger: AACAACACGCCCGGAGAATCGTAGCACTTTGGGCAAAGTGTCCTTGGTCGGCACCTGGCTTGAGAGACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 72 bp | ATAGACGGTAGTCATCAGCAGGGTCAGGAAGAGGATTaGCACCAGAGTACCACCCGTCAGCTTGGAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IDGSHQQGQEED*HQSTTRQLGEL Trigger: CAGCTCTCCAAGCTGACGGGTGGTACTCTGGTGCAAATCCTCTTCCTGACCCTGCTGATGACTACCGTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 90 bp | CAGGCCATGGTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTaGTTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QAMVGCWMQVCLMSC*LGCWMQVCLMSCLL Trigger: CAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCACCATGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | GTGCCCCTCTTGGCAGTGGTGCCACCCATCTTCCAGAACATAATATaGATGACCATGTCACAGAGCAGTAGTGCCATGCAGCAGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPLLAVVPPIFQNII*MTMSQSSSAMQQES Trigger: GCTCTCCTGCTGCATGGCACTACTGCTCTGTGACATGGTCATCAATATTATGTTCTGGAAGATGGGTGGCACCACTGCCAAGAGGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | CCCCGACAGGGTTGTTGGTCACATGAAGAAGCAGTTTaGTGGTGTTTTCTACATCCACCGTCCTCGGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: PRQGCWSHEEAV*WCFLHPPSSAR Trigger: TCGTGCCGAGGACGGTGGATGTAGAAAACACCATCAAACTGCTTCTTCATGTGACCAACAACCCTGTCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | GCTGGATGTCACTTTGAATTTCCGATCCCCCTGCACTaGTCCCAAATGCATTGTGTGCTCCGTCCATGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGCHFEFPIPLH*SQMHCVLRPWG Trigger: ACCCCATGGACGGAGCACACAATGCATTTGGGATCAGTGCAGGGGGATCGGAAATTCAAAGTGACATCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109242.8 |
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| CDS GCA 72 bp | TGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTaGTGGATGCAGGTGTCTCTGATGTCACCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WMQVCLMSCLLG*WMQVSLMSPVV Trigger: CACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | TCAGGTGGTCACAGAGACACTGTGTCTTTAAAATGGTaGTCTTCGGCCCCACTTGGCATCCATCGCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGGHRDTVSLKW*SSAPLGIHRSS Trigger: GGAAGAGCGATGGATGCCAAGTGGGGCCGAAGAGCACCATTTTAAAGACACAGTGTCTCTGTGACCACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | CGTGTACTCCTCATCTTTCTGCCACACTTGGTCCCTTaGCAGGCTGATGTTGAGATAGAAGTGAGTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVLLIFLPHLVP*QADVEIEVSVG Trigger: GCCCACACTCACTTCTATCTCAACATCAGCCTGCCAAGGGACCAAGTGTGGCAGAAAGATGAGGAGTACACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | TATGTAGTAGGTGCCAGTCCCGTACCACAGGTTCTCTaGTGTCAGCACCCACGTGTACTCCTCATCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YVVGASPVPQVL*CQHPRVLLIFL Trigger: CAGAAAGATGAGGAGTACACGTGGGTGCTGACACCAGAGAACCTGTGGTACGGGACTGGCACCTACTACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | AGGTCAGGTGGTCACAGAGACACTGTGTCTTTAAAATaGTGCTCTTCGGCCCCACTTGGCATCCATCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSGGHRDTVSLK*CSSAPLGIHRS Trigger: AGAGCGATGGATGCCAAGTGGGGCCGAAGAGCACCATTTTAAAGACACAGTGTCTCTGTGACCACCTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | AAGACCGTGAATTCTACAAAGAGGGCTTTTGTGCAGTaGTCCAGCCAGCGCCTCTGTTCCAGATGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KTVNSTKRAFVQ*SSQRLCSRCCR Trigger: TCTGCAGCATCTGGAACAGAGGCGCTGGCTGGACCACTGCACAAAAGCCCTCTTTGTAGAATTCACGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 72 bp | TTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTaGTTGGGCTGCTGGATGCAGGTGTCTCTGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGCWMQVCLMSC*LGCWMQVSLMS Trigger: TGACATCAGAGACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | GGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTaGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: GCWMQVCLMSCL*GCWMQVCLMSC Trigger: ACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | TTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTaGTTGGGCTGCTGGATGCAGGTGTGTCTGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGCWMQVCLMSC*LGCWMQVCLMS Trigger: TGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | TCTGGAATTCACTGTGGGCTTGGAAATCAGGAATTGTaGGGACCCGTTCCCCTGCTGTCTCATCCAAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGIHCGLGNQEL*GPVPLLSHPRP Trigger: AGGCCTTGGATGAGACAGCAGGGGAACGGGTCCCAACAATTCCTGATTTCCAAGCCCACAGTGAATTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS CAA 72 bp | CAGCACCCACGTGTACTCCTCATCTTTCTGCCACACTaGGTCCCTTGGCAGGCTGATGTTGAGATAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QHPRVLLIFLPH*VPWQADVEIEV Trigger: CACTTCTATCTCAACATCAGCCTGCCAAGGGACCAAGTGTGGCAGAAAGATGAGGAGTACACGTGGGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | TCATGTTTGTTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTaGTTGGGCTGCTGGATGCAGGTGTCTCTGATGTCACCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCLLGCWMQVCLMSC*LGCWMQVSLMSPVV Trigger: CACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | CTTTGCAGAATAGACGGTAGTCATCAGCAGGGTCAGGAAGAGGATTaGCACCAGAGTACCACCCGTCAGCTTGGAGAGCTGCTTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCRIDGSHQQGQEED*HQSTTRQLGELLLP Trigger: TGGAAGAAGCAGCTCTCCAAGCTGACGGGTGGTACTCTGGTGCAAATCCTCTTCCTGACCCTGCTGATGACTACCGTCTATTCTGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 90 bp | TGTTTGTTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTaGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLLGCWMQVCLMSCL*GCWMQVCLMSCLLG Trigger: GCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TGTCTGATGTCACCTGTGGCCTTCCAGTTAGGGATGTaGTTGTCATCCTGTGTGTGGCTTTTGGAGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLMSPVAFQLGM*LSSCVWLLEVL Trigger: CAGCACCTCCAAAAGCCACACACAGGATGACAATCACATCCCTAACTGGAAGGCCACAGGTGACATCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS TCA 72 bp | TCACTCAGGTCAATGAGTAAATTGGCCACACTGACCTaGGCTGATGTGGGAGAAGTCGGCAGGAAGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLRSMSKLATLT*ADVGEVGRKSL Trigger: GAGAGACTTCCTGCCGACTTCTCCCACATCAGCTCAGGTCAGTGTGGCCAATTTACTCATTGACCTGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057344.3 ENSMUST00000212537.2 |
||
| CDS TCA 72 bp | CACCAAGAAGGAGCCAGCAGCTGCACTTCAACCATCTaGACAGGCAAAATGACATGGGCTTCTTCCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HQEGASSCTSTI*TGKMTWASSLL Trigger: GAGAAGGGAAGAAGCCCATGTCATTTTGCCTGTTCAGATGGTTGAAGTGCAGCTGCTGGCTCCTTCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
||
| CDS GCA 72 bp | CAGCCAGGATCCGGTGGAAAGAAGGAAAACATCCAGTaGTCCACGCTCAAAAACTGTCTTCTCAGGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: QPGSGGKKENIQ*STLKNCLLRVT Trigger: TGTGACCCTGAGAAGACAGTTTTTGAGCGTGGAGCACTGGATGTTTTCCTTCTTTCCACCGGATCCTGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS GCA 72 bp | ACTTTGAATTTCCGATCCCCCTGCACTGATCCCAAATaGATTGTGTGCTCCGTCCATGGGGTGCTGTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TLNFRSPCTDPK*IVCSVHGVLFH Trigger: ATGGAACAGCACCCCATGGACGGAGCACACAATGCATTTGGGATCAGTGCAGGGGGATCGGAAATTCAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109242.8 |
||
| CDS CCA 72 bp | AGGATGGCACAAGCTTTCTGGAATTCACTGTGGGCTTaGAAATCAGGAATTGTTGGGACCCGTTCCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RMAQAFWNSLWA*KSGIVGTRSPA Trigger: AGCAGGGGAACGGGTCCCAACAATTCCTGATTTCCAAGCCCACAGTGAATTCCAGAAAGCTTGTGCCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS CCA 72 bp | CTCTGGAGGATGGCACAAGCTTTCTGGAATTCACTGTaGGCTTGGAAATCAGGAATTGTTGGGACCCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LWRMAQAFWNSL*AWKSGIVGTRS Trigger: GGAACGGGTCCCAACAATTCCTGATTTCCAAGCCCACAGTGAATTCCAGAAAGCTTGTGCCATCCTCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
||
| CDS CCA 72 bp | GTTGAAAGCCAGACCTGTCACTTGAAGGTTCACGCCTaGGTGTTTGTTCAAGAGCTCCTTCAGAGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VESQTCHLKVHA*VFVQELLQSFC Trigger: GCAGAAGCTCTGAAGGAGCTCTTGAACAAACACCCAGGCGTGAACCTTCAAGTGACAGGTCTGGCTTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | ACCAGGACCAAACTCATTTCTCCAAATGCTTGCACCTaGAGGGGGAAAGGCGGCAGCCTGGCAAATGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: TRTKLISPNACT*RGKGGSLANEM Trigger: CATTTCATTTGCCAGGCTGCCGCCTTTCCCCCTCAAGGTGCAAGCATTTGGAGAAATGAGTTTGGTCCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | CTTTCTGGAATTCACTGTGGGCTTGGAAATCAGGAATaGTTGGGACCCGTTCCCCTGCTGTCTCATCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSGIHCGLGNQE*LGPVPLLSHPR Trigger: CCTTGGATGAGACAGCAGGGGAACGGGTCCCAACAATTCCTGATTTCCAAGCCCACAGTGAATTCCAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | CGGAGAGTCTGTGTCTCCAGGAGTTCCTGGAGGTTTTaGAGTTGGCTGACTGCTTCTGAGAAATCACAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RRVCVSRSSWRF*SWLTASEKSQD Trigger: GTCTTGTGATTTCTCAGAAGCAGTCAGCCAACTTCAAAACCTCCAGGAACTCCTGGAGACACAGACTCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 72 bp | AGTGTAGATGGGATTGTTCTTGTCTCTCAAGCCAGGTaGCGACCAAGGACACTTTGCCCAAAGTGCTACGAT | + |
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Preference number: 6 (lower is better) Translates to: SVDGIVLVSQAR*RPRTLCPKCYD Trigger: ATCGTAGCACTTTGGGCAAAGTGTCCTTGGTCGGCACCTGGCTTGAGAGACAAGAACAATCCCATCTACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 72 bp | CCAGTGTTGTCAGCGTGTTCCTCAGATGGATTCTGGTaGAGGCGGATTCCTAACAGACTTGAGAGCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PVLSACSSDGFW*RRIPNRLESFC Trigger: ACAAAAGCTCTCAAGTCTGTTAGGAATCCGCCTGCACCAGAATCCATCTGAGGAACACGCTGACAACACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | ATAGCAGCTGTTTCCCCCATGTTGCTCCCGGATGCTTaGTTTACGTCCCAAAATATCACCCAGAATGACACC | + |
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Preference number: 6 (lower is better) Translates to: IAAVSPMLLPDA*FTSQNITQNDT Trigger: GGTGTCATTCTGGGTGATATTTTGGGACGTAAACCAAGCATCCGGGAGCAACATGGGGGAAACAGCTGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | GTGTGGCTTTTGGAGGTGCTGAAGAAGCTGGGTCAATaGGAAAGCACAATGTCTCAAAAAGCTCAGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VWLLEVLKKLGQ*ESTMSQKAQEE Trigger: CTCCTCCTGAGCTTTTTGAGACATTGTGCTTTCCCATTGACCCAGCTTCTTCAGCACCTCCAAAAGCCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | ATGCAGGTGTGTCTGATGTCATGTTTGTTGGGCTGCTaGATGCAGGTGTGTCTGATGTCATGTTTGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: MQVCLMSCLLGC*MQVCLMSCLLG Trigger: GCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | CACTGTGTCTTTAAAATGGTGCTCTTCGGCCCCACTTaGCATCCATCGCTCTTCCATGTCCTATTGTATCGG | + |
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Preference number: 6 (lower is better) Translates to: HCVFKMVLFGPT*HPSLFHVLLYR Trigger: CCGATACAATAGGACATGGAAGAGCGATGGATGCCAAGTGGGGCCGAAGAGCACCATTTTAAAGACACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | CATTTCTTCCTCGTGGTCATGTCACTGACGATCACCTaGCTTACATACCAAGAAGGGCTGTCGCCAGAATTG | + |
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Preference number: 6 (lower is better) Translates to: HFFLVVMSLTIT*LTYQEGLSPEL Trigger: CAATTCTGGCGACAGCCCTTCTTGGTATGTAAGCCAGGTGATCGTCAGTGACATGACCACGAGGAAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | TTTGAGAGCTCCAACTGTTGTTCTTCTGAGCTGATGTaGGAGAAGTCGGCAGGAAGTCTCTCAGTCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: FESSNCCSSELM*EKSAGSLSVSG Trigger: TCCAGAGACTGAGAGACTTCCTGCCGACTTCTCCCACATCAGCTCAGAAGAACAACAGTTGGAGCTCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109242.8 |
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| CDS CAA 72 bp | ACACTTTGCCCAAAGTGCTACGATTCTCCGGGCGTGTaGTTCCTTGTCTTTGTTAAGCCACGGCATGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TLCPKCYDSPGV*FLVFVKPRHVV Trigger: AACCACATGCCGTGGCTTAACAAAGACAAGGAACAACACGCCCGGAGAATCGTAGCACTTTGGGCAAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 72 bp | ATGATCAGTATAAAGCCCAGCACCTCGTCCCAGGCTTaGGACAGTGTCTTGTTGATGACCTGTAACTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: MISIKPSTSSQA*DSVLLMTCNWA Trigger: TGCCCAGTTACAGGTCATCAACAAGACACTGTCCAAAGCCTGGGACGAGGTGCTGGGCTTTATACTGATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 90 bp | TCATGTTTGTTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTaGTTGGGCTGCTGGATGCAGGTGTGTCTGATGTCATGTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SCLLGCWMQVCLMSC*LGCWMQVCLMSCLL Trigger: CAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGACATCAGACACACCTGCATCCAGCAGCCCAACAAACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TGTGATTGTCATCCTGTGTGTGGCTTTTGGAGGTGCTaGAGAAGCTGGGTCAATGGGAAAGCACAATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CDCHPVCGFWRC*RSWVNGKAQCL Trigger: GAGACATTGTGCTTTCCCATTGACCCAGCTTCTTCAGCACCTCCAAAAGCCACACACAGGATGACAATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | GTCGAGTTGCAACTGAGAGCCACAGATAATCCTGGGTaGACTTTTCTACGATTGTGGAGGAGAACAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VELQLRATDNPG*TFLRLWRRTGV Trigger: GACACCTGTTCTCCTCCACAATCGTAGAAAAGTTCACCCAGGATTATCTGTGGCTCTCAGTTGCAACTCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | GAGCCCAGGATTGGGTATAGAGCAATAACCTCCTTGTaGTTTGAAGTTCCCATCAAGAGGCCAACAACAGTC | + |
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Preference number: 6 (lower is better) Translates to: EPRIGYRAITSL*FEVPIKRPTTV Trigger: GACTGTTGTTGGCCTCTTGATGGGAACTTCAAAGCACAAGGAGGTTATTGCTCTATACCCAATCCTGGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | TTCTCCAAGGAAGTGATGTTCACAGAGATTGTGAAATaGTCTGTACTTGTGTTGAGGCTGGTGGGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FSKEVMFTEIVK*SVLVLRLVGWV Trigger: GACCCAGCCCACCAGCCTCAACACAAGTACAGACCATTTCACAATCTCTGTGAACATCACTTCCTTGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | TTGGCAGTGGTGCCACCCATCTTCCAGAACATAATATaGATGACCATGTCACAGAGCAGTAGTGCCATGCAG | + |
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Preference number: 6 (lower is better) Translates to: LAVVPPIFQNII*MTMSQSSSAMQ Trigger: CTGCATGGCACTACTGCTCTGTGACATGGTCATCAATATTATGTTCTGGAAGATGGGTGGCACCACTGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | CTCCTGAGCAGGAATCCCACAGTTTCCTTTAATTCCTaGACCACCTGTGTAAGAGAGGGGGACTCACAAACA | + |
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Preference number: 6 (lower is better) Translates to: LLSRNPTVSFNS*TTCVREGDSQT Trigger: TGTTTGTGAGTCCCCCTCTCTTACACAGGTGGTCAAGGAATTAAAGGAAACTGTGGGATTCCTGCTCAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | AGGGAGCCCAGGATTGGGTATAGAGCAATAACCTCCTaGTGCTTTGAAGTTCCCATCAAGAGGCCAACAACA | + |
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Preference number: 6 (lower is better) Translates to: REPRIGYRAITS*CFEVPIKRPTT Trigger: TGTTGTTGGCCTCTTGATGGGAACTTCAAAGCACAAGGAGGTTATTGCTCTATACCCAATCCTGGGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 90 bp | CTTGTCATCCAAAGTCTTAAAAGGGTTGAAAGCCAGACCTGTCACTaGAAGGTTCACGCCTGGGTGTTTGTTCAAGAGCTCCTTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LVIQSLKRVESQTCH*KVHAWVFVQELLQS Trigger: GCTCTGAAGGAGCTCTTGAACAAACACCCAGGCGTGAACCTTCAAGTGACAGGTCTGGCTTTCAACCCTTTTAAGACTTTGGATGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | TGTGTATTTCTCCTGAGCAGGAATCCCACAGTTTCCTTTAATTCCTaGACCACCTGTGTAAGAGAGGGGGACTCACAAACAAGAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: CVFLLSRNPTVSFNS*TTCVREGDSQTRAG Trigger: CCCTGCTCTTGTTTGTGAGTCCCCCTCTCTTACACAGGTGGTCAAGGAATTAAAGGAAACTGTGGGATTCCTGCTCAGGAGAAATACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | AAAGTCTTAAAAGGGTTGAAAGCCAGACCTGTCACTTaGAGGTTCACGCCTGGGTGTTTGTTCAAGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KVLKGLKARPVT*RFTPGCLFKSS Trigger: GGAGCTCTTGAACAAACACCCAGGCGTGAACCTTCAAGTGACAGGTCTGGCTTTCAACCCTTTTAAGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS TCA 72 bp | TCGTGTAAACTGGTTCCAGGGATGTCGAGTTGCAACTaGGAGCCACAGATAATCCTGGGTGAACTTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SCKLVPGMSSCN*EPQIILGELFY Trigger: GTAGAAAAGTTCACCCAGGATTATCTGTGGCTCTCAGTTGCAACTCGACATCCCTGGAACCAGTTTACACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS GCA 72 bp | GATAGCTCGATGGAGGAAAAATCGACTAGAGTCCTTTaGAGAATAGACGGTAGTCATCAGCAGGGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: DSSMEEKSTRVL*RIDGSHQQGQE Trigger: TTCCTGACCCTGCTGATGACTACCGTCTATTCTGCAAAGGACTCTAGTCGATTTTTCCTCCATCGAGCTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 72 bp | CAAAGTCTTAAAAGGGTTGAAAGCCAGACCTGTCACTaGAAGGTTCACGCCTGGGTGTTTGTTCAAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QSLKRVESQTCH*KVHAWVFVQEL Trigger: GAGCTCTTGAACAAACACCCAGGCGTGAACCTTCAAGTGACAGGTCTGGCTTTCAACCCTTTTAAGACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 90 bp | AGAACCAAAAGGGAGCCCAGGATTGGGTATAGAGCAATAACCTCCTaGTGCTTTGAAGTTCCCATCAAGAGGCCAACAACAGTCACTATA | + |
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Preference number: 6 (lower is better) Translates to: RTKREPRIGYRAITS*CFEVPIKRPTTVTI Trigger: TATAGTGACTGTTGTTGGCCTCTTGATGGGAACTTCAAAGCACAAGGAGGTTATTGCTCTATACCCAATCCTGGGCTCCCTTTTGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS GCA 72 bp | TTGTTCCTTGTCTTTGTTAAGCCACGGCATGTGGTTTaGCATCAGGGAGAACAACAATGTCAGGAAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: LFLVFVKPRHVV*HQGEQQCQEDD Trigger: GTCATCTTCCTGACATTGTTGTTCTCCCTGATGGCAAACCACATGCCGTGGCTTAACAAAGACAAGGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | AAGTCTCTCAGTCTCTGGAGGATGGCACAAGCTTTCTaGAATTCACTGTGGGCTTGGAAATCAGGAATTGTT | + |
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Preference number: 6 (lower is better) Translates to: KSLSLWRMAQAF*NSLWAWKSGIV Trigger: AACAATTCCTGATTTCCAAGCCCACAGTGAATTCCAGAAAGCTTGTGCCATCCTCCAGAGACTGAGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | GATCCTGGGAAGAATATGTCATTAGGAATGCGAGTCTaGCGGATCAAAACATTGCCCAGAAGAAAGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: DPGKNMSLGMRV*RIKTLPRRKEF Trigger: GAACTCCTTTCTTCTGGGCAATGTTTTGATCCGCCAGACTCGCATTCCTAATGACATATTCTTCCCAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CAA 72 bp | ATGAGGGTCACCGCACAGAGCAGATTCACATTAGCATaGAAGACCGTGAATTCTACAAAGAGGGCTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: MRVTAQSRFTLA*KTVNSTKRAFV Trigger: CACAAAAGCCCTCTTTGTAGAATTCACGGTCTTCAATGCTAATGTGAATCTGCTCTGTGCGGTGACCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS TCA 72 bp | AATGAAATGATGCTTCTCTATGCACAGGTTCCATCTTaGGAAGACAGCATTAGAGTGTGTGACCACGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: NEMMLLYAQVPS*EDSIRVCDHGR Trigger: CCTTCCGTGGTCACACACTCTAATGCTGTCTTCTCAAGATGGAACCTGTGCATAGAGAAGCATCATTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CCA 72 bp | GAGAACAACAATGTCAGGAAGATGACCTTTATCGGCTaGCTGATAAAGATGTCTTGTAGTACCGACAGCATC | + |
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Preference number: 6 (lower is better) Translates to: ENNNVRKMTFIG*LIKMSCSTDSI Trigger: GATGCTGTCGGTACTACAAGACATCTTTATCAGCCAGCCGATAAAGGTCATCTTCCTGACATTGTTGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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| CDS CCA 72 bp | TTACCTTCACCTTCTGCATATCTTCTCGATCCTTTCTaGAAGCCCACATGGCTAAGAGGATATAGAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: LPSPSAYLLDPF*KPTWLRGYRIL Trigger: TAGGATTCTATATCCTCTTAGCCATGTGGGCTTCCAGAAAGGATCGAGAAGATATGCAGAAGGTGAAGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 |
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| CDS CAA 72 bp | ATGTCATTAGGAATGCGAGTCTGGCGGATCAAAACATaGCCCAGAAGAAAGGAGTTCCCGTCAGTAATAAAT | + |
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Preference number: 6 (lower is better) Translates to: MSLGMRVWRIKT*PRRKEFPSVIN Trigger: ATTTATTACTGACGGGAACTCCTTTCTTCTGGGCAATGTTTTGATCCGCCAGACTCGCATTCCTAATGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057344.3 ENSMUST00000109242.8 ENSMUST00000212537.2 ENSMUST00000212545.2 |
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