RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKD1L2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034416

Ensembl transcript IDs: ENSMUST00000098375.6, ENSMUST00000109093.9

Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGCCGACTAGGACACACCACCAGGGCAGGCCACGAGGGGACTTGCTaGCCCGAGACGTGCTGGGATATGCCAGTGCCGGGGTACCAGGCT +
Preference number: 5 (lower is better)
Translates to: SRLGHTTRAGHEGTC*PETCWDMPVPGYQA
Trigger: AGCCTGGTACCCCGGCACTGGCATATCCCAGCACGTCTCGGGTCAGCAAGTCCCCTCGTGGCCTGCCCTGGTGGTGTGTCCTAGTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CCCAGGAGGCCCGCAGCCCCGACAGCGGCTCTACAAAGTACACAGTaGAGTTTCCAGAGGGGGCGGAGGCAGTGCCGGTGCCTTCATTGC +
Preference number: 5 (lower is better)
Translates to: PRRPAAPTAALQSTQ*SFQRGRRQCRCLHC
Trigger: GCAATGAAGGCACCGGCACTGCCTCCGCCCCCTCTGGAAACTTCACTGTGTACTTTGTAGAGCCGCTGTCGGGGCTGCGGGCCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GGACGAACCTTGGTACTGGCTACCAACAGGGCTTCAGTGGCACGCTaGAGAGCACAGCTGGCTTCCCACTGGGCCGCAGGTGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRTLVLATNRASVAR*RAQLASHWAAGVSS
Trigger: GGAGCTCACACCTGCGGCCCAGTGGGAAGCCAGCTGTGCTCTGCAGCGTGCCACTGAAGCCCTGTTGGTAGCCAGTACCAAGGTTCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp CTTTGCAGGAACTGCTGGGTGTCTTCATCGGGAATGAAGGCCAGATaGCCTCCGTGCCCTTCACACCAGCCCTGGGCGCCGGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LCRNCWVSSSGMKAR*PPCPSHQPWAPGKV
Trigger: CACCTTCCCCGGCGCCCAGGGCTGGTGTGAAGGGCACGGAGGCCATCTGGCCTTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp CCAGAGGGGGCGGAGGCAGTGCCGGTGCCTTCATTGCTGACAGCTTaGATCTTTAGGTGGTGCCTCCCAGGGCCCAGCATCTCCTGGATG +
Preference number: 5 (lower is better)
Translates to: PEGAEAVPVPSLLTA*IFRWCLPGPSISWM
Trigger: CATCCAGGAGATGCTGGGCCCTGGGAGGCACCACCTAAAGATCCAAGCTGTCAGCAATGAAGGCACCGGCACTGCCTCCGCCCCCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CCTCGAAGGTCAGCTCCTCCAGGGTGCCACGAGCCACTGAGACATTaGCCACCAAGTCCCACCCAAGCTCCACACGGTCAGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PRRSAPPGCHEPLRH*PPSPTQAPHGQKPR
Trigger: CCTGGGCTTCTGACCGTGTGGAGCTTGGGTGGGACTTGGTGGTCAATGTCTCAGTGGCTCGTGGCACCCTGGAGGAGCTGACCTTCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp TCCCGCCACCTCGAAGGTCAGCTCCTCCAGGGTGCCACGAGCCACTaGGACATTGACCACCAAGTCCCACCCAAGCTCCACACGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SRHLEGQLLQGATSH*DIDHQVPPKLHTVR
Trigger: TCTGACCGTGTGGAGCTTGGGTGGGACTTGGTGGTCAATGTCTCAGTGGCTCGTGGCACCCTGGAGGAGCTGACCTTCGAGGTGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp CCAAGTGGTAGGTACACAGCAGGGAGGGCTGGTTCGGGGCCACAGTaGAGGCAGAAACCTGAGGGCAGGCAGAAGCAGTACTCCACAGGG +
Preference number: 5 (lower is better)
Translates to: PSGRYTAGRAGSGPQ*RQKPEGRQKQYSTG
Trigger: CCCTGTGGAGTACTGCTTCTGCCTGCCCTCAGGTTTCTGCCTCCACTGTGGCCCCGAACCAGCCCTCCCTGCTGTGTACCTACCACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp GATCCTCAGGACGAACCTTGGTACTGGCTACCAACAGGGCTTCAGTaGCACGCTGCAGAGCACAGCTGGCTTCCCACTGGGCCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: DPQDEPWYWLPTGLQ*HAAEHSWLPTGPQV
Trigger: CACCTGCGGCCCAGTGGGAAGCCAGCTGTGCTCTGCAGCGTGCCACTGAAGCCCTGTTGGTAGCCAGTACCAAGGTTCGTCCTGAGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp AGACTCCTTCTCCGAAGGGCAGGTCCTCTGGGTGCAGGATCCAGGTaGGAAGATCACCTGTGGCGGCCACAGGAGGCAGGTGTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: RLLLRRAGPLGAGSR*EDHLWRPQEAGVFG
Trigger: CCCAAACACACCTGCCTCCTGTGGCCGCCACAGGTGATCTTCCCACCTGGATCCTGCACCCAGAGGACCTGCCCTTCGGAGAAGGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CAGATGACTGCCCAACACTCTCTTCCTCCTGGGAGAAGTTCGCGTTaGGTCCCGCCACCTCGAAGGTCAGCTCCTCCAGGGTGCCACGAG +
Preference number: 5 (lower is better)
Translates to: QMTAQHSLPPGRSSR*VPPPRRSAPPGCHE
Trigger: CTCGTGGCACCCTGGAGGAGCTGACCTTCGAGGTGGCGGGACTCAACGCGAACTTCTCCCAGGAGGAAGAGAGTGTTGGGCAGTCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp AGGGCAGGTCCTCTGGGTGCAGGATCCAGGTGGGAAGATCACCTGTaGCGGCCACAGGAGGCAGGTGTGTTTGGGCATCATAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: RAGPLGAGSRWEDHL*RPQEAGVFGHHSWS
Trigger: AGACCAGCTATGATGCCCAAACACACCTGCCTCCTGTGGCCGCCACAGGTGATCTTCCCACCTGGATCCTGCACCCAGAGGACCTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp ATGGCGTTGGGCATCACCAGGAAGGAGCTTCCGAAGAAGGTGAGGTaGTTGCAAAGGCAGTGTGTCTGGGAGGGGGTGGTTCGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: MALGITRKELPKKVR*LQRQCVWEGVVRGP
Trigger: GGGCCCACGAACCACCCCCTCCCAGACACACTGCCTTTGCAACCACCTCACCTTCTTCGGAAGCTCCTTCCTGGTGATGCCCAACGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CCGGGTCAATCGTGCAGGCAGGCACTTCAGGTCGAGGTAGCATGCTaGTCATGTAGGTATCCTCCCCGTAGGCGTGGCTGGTCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: PGQSCRQALQVEVAC*SCRYPPRRRGWSVL
Trigger: CAGCACTGACCAGCCACGCCTACGGGGAGGATACCTACATGATCAGCATGCTACCTCGACCTGAAGTGCCTGCCTGCACGATTGACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GATCCCCTCGTCCCTGTGCTCCCGGTAGCGCTGGAGGTCGCGATCTaGCAGGATAGTTCTCTTTACAAACACCACGAGGGCACTCCAGCT +
Preference number: 5 (lower is better)
Translates to: DPLVPVLPVALEVAI*QDSSLYKHHEGTPA
Trigger: AGCTGGAGTGCCCTCGTGGTGTTTGTAAAGAGAACTATCCTGGCAGATCGCGACCTCCAGCGCTACCGGGAGCACAGGGACGAGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp GCAGGCCTTCTAGACACTGGTACTGCACCCACAGGTAGCTACCCCTaGTGGGGCACGGGTCTCCAAAGTAGGTCCCATCTACCGCAACCT +
Preference number: 5 (lower is better)
Translates to: AGLLDTGTAPTGSYP*WGTGLQSRSHLPQP
Trigger: AGGTTGCGGTAGATGGGACCTACTTTGGAGACCCGTGCCCCACCAGGGGTAGCTACCTGTGGGTGCAGTACCAGTGTCTAGAAGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp ACCACCACGGGGTTGTCCTCAAAGGTAGCAAAGAGCTCGGCAGTCTaGCGGACGTCAATGGCGTTGGGCATCACCAGGAAGGAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: TTTGLSSKVAKSSAV*RTSMALGITRKELP
Trigger: CGGAAGCTCCTTCCTGGTGATGCCCAACGCCATTGACGTCCGCCAGACTGCCGAGCTCTTTGCTACCTTTGAGGACAACCCCGTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp TGTAGACGCTGTCCTTCCAAAGGCCACGTACCGCCAGCTCAGGCTTaGGGTGCCACGTGTTCTCTTTCGGTTTCACAGACCCACGCGTGG +
Preference number: 5 (lower is better)
Translates to: CRRCPSKGHVPPAQA*GATCSLSVSQTHAW
Trigger: CCACGCGTGGGTCTGTGAAACCGAAAGAGAACACGTGGCACCCCAAGCCTGAGCTGGCGGTACGTGGCCTTTGGAAGGACAGCGTCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp AGCCACATTCTCCCTCCAGGTCTGAGGGAGGCCAGATGCCCCGAGTaGACAAATAGGGGGTCTGGTGCCCGTAGAAAGCATCCTGGACTA +
Preference number: 5 (lower is better)
Translates to: SHILPPGLREARCPE*TNRGSGARRKHPGL
Trigger: TAGTCCAGGATGCTTTCTACGGGCACCAGACCCCCTATTTGTGCACTCGGGGCATCTGGCCTCCCTCAGACCTGGAGGGAGAATGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GCAGTGCCGGTGCCTTCATTGCTGACAGCTTGGATCTTTAGGTGGTaGCTCCCAGGGCCCAGCATCTCCTGGATGTCTCTGTCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: AVPVPSLLTAWIFRW*LPGPSISWMSLSKV
Trigger: GACCTTGGACAGAGACATCCAGGAGATGCTGGGCCCTGGGAGGCACCACCTAAAGATCCAAGCTGTCAGCAATGAAGGCACCGGCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GTGGCAGCAGGCAGGGTGAAGGTCACAGAGTCAGCGGCAGCAGTGTaGACTGAAGAGCCTTGCCAACTCCGTGGCTGTATTCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: VAAGRVKVTESAAAV*TEEPCQLRGCILSV
Trigger: CACAGACAGAATACAGCCACGGAGTTGGCAAGGCTCTTCAGTGCACACTGCTGCCGCTGACTCTGTGACCTTCACCCTGCCTGCTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp GAGGCAGTGCCGGTGCCTTCATTGCTGACAGCTTGGATCTTTAGGTaGTGCCTCCCAGGGCCCAGCATCTCCTGGATGTCTCTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: EAVPVPSLLTAWIFR*CLPGPSISWMSLSK
Trigger: CTTGGACAGAGACATCCAGGAGATGCTGGGCCCTGGGAGGCACCACCTAAAGATCCAAGCTGTCAGCAATGAAGGCACCGGCACTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CAGGAAGGTGCCTTCAGCAGGAACCGCCACGTGGTAGTTCCCAGATaGCTGCCCAACACTCTCTTCCTCCTGGGAGAAGTTCGCGTTGAG +
Preference number: 5 (lower is better)
Translates to: QEGAFSRNRHVVVPR*LPNTLFLLGEVRVE
Trigger: CTCAACGCGAACTTCTCCCAGGAGGAAGAGAGTGTTGGGCAGTCATCTGGGAACTACCACGTGGCGGTTCCTGCTGAAGGCACCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CTGGACCCTCTGCATGTTCTGCAGGCCGGTGGTGACCACGGACAGTaGTCGCAGCATAAGCTCTCTGACCTTCCGCTTGATGTCCATTCC +
Preference number: 5 (lower is better)
Translates to: LDPLHVLQAGGDHGQ*SQHKLSDLPLDVHS
Trigger: GGAATGGACATCAAGCGGAAGGTCAGAGAGCTTATGCTGCGATCACTGTCCGTGGTCACCACCGGCCTGCAGAACATGCAGAGGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp CCCAGGGAGTATGGCCCATGGCATCCATCCAGAGAATCCTGTAATTaGTGGGCAACAGCGCAAGAGCTTTCCCGGACCCTCACTTGGCGA +
Preference number: 5 (lower is better)
Translates to: PREYGPWHPSRESCN*WATAQELSRTLTWR
Trigger: TCGCCAAGTGAGGGTCCGGGAAAGCTCTTGCGCTGTTGCCCAGCAATTACAGGATTCTCTGGATGGATGCCATGGGCCATACTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp TTGTGCCCCGAGCCTCCCGTGAGTCCGATCCACCATTCTCTGTCCTaGGTAATGTGCCTTTGCAGGAACTGCTGGGTGTCTTCATCGGGA +
Preference number: 5 (lower is better)
Translates to: LCPEPPVSPIHHSLS*VMCLCRNCWVSSSG
Trigger: TCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGATCGGACTCACGGGAGGCTCGGGGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp CCATCCTTCCCCATCGGGAGACGAGGCCGGGTGTTCCGGAAGATCTaGACAATCAGGAGGTTGATGGGGAACATGAGGATAGAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PSFPIGRRGRVFRKI*TIRRLMGNMRIELS
Trigger: GGAGAGCTCTATCCTCATGTTCCCCATCAACCTCCTGATTGTCCAGATCTTCCGGAACACCCGGCCTCGTCTCCCGATGGGGAAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CGGGGAAGGTGTGTTCCAGCGGCACAAACTCATAGCAAGCATCTCTaGAGAACACCTGGCTCCTTGAGCAGAGGCTGCCCCCTTCTGACT +
Preference number: 5 (lower is better)
Translates to: RGRCVPAAQTHSKHL*RTPGSLSRGCPLLT
Trigger: AGTCAGAAGGGGGCAGCCTCTGCTCAAGGAGCCAGGTGTTCTTCAGAGATGCTTGCTATGAGTTTGTGCCGCTGGAACACACCTTCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp GTCTGCAGGAAGCTGCTGTTCAGCAGTAGCACGGAGGAGTTGCTGTaGAGGAGGGTCAGTGATCGTGGCCAAAATCCTCGGAGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VCRKLLFSSSTEELL*RRVSDRGQNPRSLQ
Trigger: CTGCAGACTCCGAGGATTTTGGCCACGATCACTGACCCTCCTTCACAGCAACTCCTCCGTGCTACTGCTGAACAGCAGCTTCCTGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp GATGGCCGCTGGAGCTGGTCAGGCGAAGTCCACCAACAGTCCCACTaGCATCAAATTGGCTTCGGGAAGGGAAGGGGTTCTGTGAGAAAC +
Preference number: 5 (lower is better)
Translates to: DGRWSWSGEVHQQSH*HQIGFGKGRGSVRN
Trigger: GTTTCTCACAGAACCCCTTCCCTTCCCGAAGCCAATTTGATGTCAGTGGGACTGTTGGTGGACTTCGCCTGACCAGCTCCAGCGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp TATACCTGTTTCAGGTGTCAGAAGTCCCTCCTCCGTGGGCTGCGCTaGGGGAGTCAGGTTAGGGGGTCCCTGTTTCTGTCTCCCATCCTT +
Preference number: 5 (lower is better)
Translates to: YTCFRCQKSLLRGLR*GSQVRGSLFLSPIL
Trigger: AAGGATGGGAGACAGAAACAGGGACCCCCTAACCTGACTCCCTCAGCGCAGCCCACGGAGGAGGGACTTCTGACACCTGAAACAGGTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp CCGATCCACCATTCTCTGTCCTGGGTAATGTGCCTTTGCAGGAACTaGTGGGTGTCTTCATCGGGAATGAAGGCCAGATGGCCTCCGTGC +
Preference number: 5 (lower is better)
Translates to: PIHHSLSWVMCLCRN*WVSSSGMKARWPPC
Trigger: GCACGGAGGCCATCTGGCCTTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GAGCCTCCCGTGAGTCCGATCCACCATTCTCTGTCCTGGGTAATGTaGCTTTGCAGGAACTGCTGGGTGTCTTCATCGGGAATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: EPPVSPIHHSLSWVM*LCRNCWVSSSGMKA
Trigger: GGCCTTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGATCGGACTCACGGGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GTGAAGCTACTCCGAGTGGCACTGCAGAAGACCGAGTACCAGATGTaGCCGTCCTGGAAGCCCGTGGAGGTTTTAGTGAAGAACAGGTGG +
Preference number: 5 (lower is better)
Translates to: VKLLRVALQKTEYQM*PSWKPVEVLVKNRW
Trigger: CCACCTGTTCTTCACTAAAACCTCCACGGGCTTCCAGGACGGGCACATCTGGTACTCGGTCTTCTGCAGTGCCACTCGGAGTAGCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GGCGTTGGCTCTGGCTCTGGTACCGCCACGCCTGAGGGAAGCCATTaGTGTTATTGTAGGCAGAGGCATTCCAGCCTTCTCCATAGTCTA +
Preference number: 5 (lower is better)
Translates to: GVGSGSGTATPEGSH*CYCRQRHSSLLHSL
Trigger: TAGACTATGGAGAAGGCTGGAATGCCTCTGCCTACAATAACAGCAATGGCTTCCCTCAGGCGTGGCGGTACCAGAGCCAGAGCCAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp AAGGGGTTCTGTGAGAAACTCATCATCCTTATGTCCACAGGCTCCTaGCTGTCCTCCATAGGGCAGAGGAAGGTGGCAGCAGGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: KGFCEKLIILMSTGS*LSSIGQRKVAAGRV
Trigger: CACCCTGCCTGCTGCCACCTTCCTCTGCCCTATGGAGGACAGCCAGGAGCCTGTGGACATAAGGATGATGAGTTTCTCACAGAACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp CTCCGAGTGGCACTGCAGAAGACCGAGTACCAGATGTGCCCGTCCTaGAAGCCCGTGGAGGTTTTAGTGAAGAACAGGTGGCTAAACTGC +
Preference number: 5 (lower is better)
Translates to: LRVALQKTEYQMCPS*KPVEVLVKNRWLNC
Trigger: GCAGTTTAGCCACCTGTTCTTCACTAAAACCTCCACGGGCTTCCAGGACGGGCACATCTGGTACTCGGTCTTCTGCAGTGCCACTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp TGGGCAACAGCGCAAGAGCTTTCCCGGACCCTCACTTGGCGAATGTaGGCACTGCCAACCAACTTAGAGTTCCCGTCAGTGACAAAGCCT +
Preference number: 5 (lower is better)
Translates to: WATAQELSRTLTWRM*ALPTNLEFPSVTKP
Trigger: AGGCTTTGTCACTGACGGGAACTCTAAGTTGGTTGGCAGTGCCCACATTCGCCAAGTGAGGGTCCGGGAAAGCTCTTGCGCTGTTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp ACAAATAGGGGGTCTGGTGCCCGTAGAAAGCATCCTGGACTAGAATaGCCTCTCCCGAGTCACAGTGCATGGTGGCGTTGTGTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: TNRGSGARRKHPGLE*PLPSHSAWWRCVPH
Trigger: GTGAGGGACACAACGCCACCATGCACTGTGACTCGGGAGAGGTCATTCTAGTCCAGGATGCTTTCTACGGGCACCAGACCCCCTATTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp GGAAGAGGCTGTGACCGTGATGTTCCCGATGTCCAAGCTCAGTTCTaGGAAAGCGTTCCGCACATGTACGGTGACCAGGAAGGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: GRGCDRDVPDVQAQF*ESVPHMYGDQEGAF
Trigger: GAAGGCACCTTCCTGGTCACCGTACATGTGCGGAACGCTTTCTCAGAACTGAGCTTGGACATCGGGAACATCACGGTCACAGCCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp GAACGTCTTGGTCGGCTTTCACTGGCCGGCAGTTCTTCTCACAGCTaGTTTGAGGCCCAAGGTTCAAGGGAGCAGACACGTAGAGGCACT +
Preference number: 5 (lower is better)
Translates to: ERLGRLSLAGSSSHS*FEAQGSREQTRRGT
Trigger: AGTGCCTCTACGTGTCTGCTCCCTTGAACCTTGGGCCTCAAATCAGCTGTGAGAAGAACTGCCGGCCAGTGAAAGCCGACCAAGACGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp TGTCCATTCCAAGTTGCCCAGAGCCTGGGCTCTGGACCTCCGAGTTaGGTTCAGAGGACACAGCCTTGGCAAACAGGAGAAGCTGTTCAC +
Preference number: 5 (lower is better)
Translates to: CPFQVAQSLGSGPPS*VQRTQPWQTGEAVH
Trigger: GTGAACAGCTTCTCCTGTTTGCCAAGGCTGTGTCCTCTGAACTCAACTCGGAGGTCCAGAGCCCAGGCTCTGGGCAACTTGGAATGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp TGCAGAGAAGCATGGAGAAGCAACAGGACACCCTCTGTACGCGCGTaGAGCTACTCCGAGTGGCACTGCAGAAGACCGAGTACCAGATGT +
Preference number: 5 (lower is better)
Translates to: CREAWRSNRTPSVRA*SYSEWHCRRPSTRC
Trigger: ACATCTGGTACTCGGTCTTCTGCAGTGCCACTCGGAGTAGCTTCACGCGCGTACAGAGGGTGTCCTGTTGCTTCTCCATGCTTCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp ATCCACCATTCTCTGTCCTGGGTAATGTGCCTTTGCAGGAACTGCTaGGTGTCTTCATCGGGAATGAAGGCCAGATGGCCTCCGTGCCCT +
Preference number: 5 (lower is better)
Translates to: IHHSLSWVMCLCRNC*VSSSGMKARWPPCP
Trigger: AGGGCACGGAGGCCATCTGGCCTTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp TGTAATTGCTGGGCAACAGCGCAAGAGCTTTCCCGGACCCTCACTTaGCGAATGTGGGCACTGCCAACCAACTTAGAGTTCCCGTCAGTG +
Preference number: 5 (lower is better)
Translates to: CNCWATAQELSRTLT*RMWALPTNLEFPSV
Trigger: CACTGACGGGAACTCTAAGTTGGTTGGCAGTGCCCACATTCGCCAAGTGAGGGTCCGGGAAAGCTCTTGCGCTGTTGCCCAGCAATTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp AGGGAGTATGGCCCATGGCATCCATCCAGAGAATCCTGTAATTGCTaGGCAACAGCGCAAGAGCTTTCCCGGACCCTCACTTGGCGAATG +
Preference number: 5 (lower is better)
Translates to: REYGPWHPSRESCNC*ATAQELSRTLTWRM
Trigger: CATTCGCCAAGTGAGGGTCCGGGAAAGCTCTTGCGCTGTTGCCCAGCAATTACAGGATTCTCTGGATGGATGCCATGGGCCATACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp ACAGCCTTGGCAAACAGGAGAAGCTGTTCACGGCCACTCTCTTGGTaGAGAGCTGTGGCGATTCTCTCTGACACCATCTCCTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: TALANRRSCSRPLSW*RAVAILSDTISWNV
Trigger: GACATTCCAGGAGATGGTGTCAGAGAGAATCGCCACAGCTCTGCACCAAGAGAGTGGCCGTGAACAGCTTCTCCTGTTTGCCAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp ATCTCCCACGGTGACAGTGAGCAGAACGTCTTGGTCGGCTTTCACTaGCCGGCAGTTCTTCTCACAGCTGATTTGAGGCCCAAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: ISHGDSEQNVLVGFH*PAVLLTADLRPKVQ
Trigger: TTGAACCTTGGGCCTCAAATCAGCTGTGAGAAGAACTGCCGGCCAGTGAAAGCCGACCAAGACGTTCTGCTCACTGTCACCGTGGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp GACACAGCCTTGGCAAACAGGAGAAGCTGTTCACGGCCACTCTCTTaGTGCAGAGCTGTGGCGATTCTCTCTGACACCATCTCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: DTALANRRSCSRPLS*CRAVAILSDTISWN
Trigger: ATTCCAGGAGATGGTGTCAGAGAGAATCGCCACAGCTCTGCACCAAGAGAGTGGCCGTGAACAGCTTCTCCTGTTTGCCAAGGCTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CTCTGTCCAAGGTCAGATTGTAAAGCTGCGAGCCCCTCTGGGCGGTaGACTCAGCCAGAGTTCTGTTATGCGAAAGCACAGCATAAGTCG +
Preference number: 5 (lower is better)
Translates to: LCPRSDCKAASPSGR*TQPEFCYAKAQHKS
Trigger: CGACTTATGCTGTGCTTTCGCATAACAGAACTCTGGCTGAGTTCACCGCCCAGAGGGGCTCGCAGCTTTACAATCTGACCTTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp CTGCACCACCATATAGTAGAAGAGAAAGAGAAAGTAAGTGAGCTCTaGCGCCACCACGAAGGGATGCCAGCCATCCGTGAAGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: LHHHIVEEKEKVSEL*RHHEGMPAIREGVQ
Trigger: CTGTACCCCTTCACGGATGGCTGGCATCCCTTCGTGGTGGCGGCAGAGCTCACTTACTTTCTCTTTCTCTTCTACTATATGGTGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp ATTTTCACCAGGAGCAAGTCCGCAATCTCTCCTTCCTCCCACAGCTaGTCAGACTTTTGCTCCTCGCTGAAGGCCACCAGAATGACAGAG +
Preference number: 5 (lower is better)
Translates to: IFTRSKSAISPSSHS*SDFCSSLKATRMTE
Trigger: CTCTGTCATTCTGGTGGCCTTCAGCGAGGAGCAAAAGTCTGACCAGCTGTGGGAGGAAGGAGAGATTGCGGACTTGCTCCTGGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp CTGTTCACGGCCACTCTCTTGGTGCAGAGCTGTGGCGATTCTCTCTaGCACCATCTCCTGGAATGTCACATCTTCAACACCCGTGTAACT +
Preference number: 5 (lower is better)
Translates to: LFTATLLVQSCGDSL*HHLLECHIFNTRVT
Trigger: AGTTACACGGGTGTTGAAGATGTGACATTCCAGGAGATGGTGTCAGAGAGAATCGCCACAGCTCTGCACCAAGAGAGTGGCCGTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 90 bp AGTCCCACTGACATCAAATTGGCTTCGGGAAGGGAAGGGGTTCTGTaGGAAACTCATCATCCTTATGTCCACAGGCTCCTGGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SPTDIKLASGREGVL*ETHHPYVHRLLAVL
Trigger: GAGGACAGCCAGGAGCCTGTGGACATAAGGATGATGAGTTTCTCACAGAACCCCTTCCCTTCCCGAAGCCAATTTGATGTCAGTGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GTGAAGGTCACAGAGTCAGCGGCAGCAGTGTGCACTGAAGAGCCTTaGCAACTCCGTGGCTGTATTCTGTCTGTGTATACAGAGATGGAA +
Preference number: 5 (lower is better)
Translates to: VKVTESAAAVCTEEP*QLRGCILSVYTEME
Trigger: TTCCATCTCTGTATACACAGACAGAATACAGCCACGGAGTTGGCAAGGCTCTTCAGTGCACACTGCTGCCGCTGACTCTGTGACCTTCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp CCTTATCCAGGACACAGTCTCCAACATCGACGGACAGCCACGAGTTaGAGAGGAAATACCACTTCCGGTCCACCACAGAATCATAGACCA +
Preference number: 5 (lower is better)
Translates to: PYPGHSLQHRRTATS*RGNTTSGPPQNHRP
Trigger: TGGTCTATGATTCTGTGGTGGACCGGAAGTGGTATTTCCTCTGCAACTCGTGGCTGTCCGTCGATGTTGGAGACTGTGTCCTGGATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp GAGCTGGTCAGGCGAAGTCCACCAACAGTCCCACTGACATCAAATTaGCTTCGGGAAGGGAAGGGGTTCTGTGAGAAACTCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: ELVRRSPPTVPLTSN*LREGKGFCEKLIIL
Trigger: AAGGATGATGAGTTTCTCACAGAACCCCTTCCCTTCCCGAAGCCAATTTGATGTCAGTGGGACTGTTGGTGGACTTCGCCTGACCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GTGGAGGTTTTAGTGAAGAACAGGTGGCTAAACTGCTTCCTGTCCTaGTCTGTGGCCACAGGAAACACCTTATCCAGGACACAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: VEVLVKNRWLNCFLS*SVATGNTLSRTQSP
Trigger: TGGAGACTGTGTCCTGGATAAGGTGTTTCCTGTGGCCACAGAGCAGGACAGGAAGCAGTTTAGCCACCTGTTCTTCACTAAAACCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp ATGGGGAACATGAGGATAGAGCTCTCCAACCCGATCATCACCTCCTaGCAAGTGAACTCAATTTTGCCCAGATCCATCTTCTGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: MGNMRIELSNPIITS*QVNSILPRSIFCSA
Trigger: AGCCGAGCAGAAGATGGATCTGGGCAAAATTGAGTTCACTTGGCAGGAGGTGATGATCGGGTTGGAGAGCTCTATCCTCATGTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 90 bp CAAACAGGAGAAGCTGTTCACGGCCACTCTCTTGGTGCAGAGCTGTaGCGATTCTCTCTGACACCATCTCCTGGAATGTCACATCTTCAA +
Preference number: 5 (lower is better)
Translates to: QTGEAVHGHSLGAEL*RFSLTPSPGMSHLQ
Trigger: TTGAAGATGTGACATTCCAGGAGATGGTGTCAGAGAGAATCGCCACAGCTCTGCACCAAGAGAGTGGCCGTGAACAGCTTCTCCTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp TTCAGGCTCGGTGAATACCTTCATGTCCTGTTTGTGTCCGCTCTTTaGTTCAGCATTTATTCCCGACAGTTCTTGGAGACTGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: FRLGEYLHVLFVSAL*FSIYSRQFLETGRG
Trigger: GCCTCTTCCAGTCTCCAAGAACTGTCGGGAATAAATGCTGAAGCAAAGAGCGGACACAAACAGGACATGAAGGTATTCACCGAGCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp GAACAGATTGACATTAGCGTTGTAGACAGTGAACTCCACAAACACTaGTCTGGTCAGGGCATCCAGCCAGCTGTTGTCAAAGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: EQIDISVVDSELHKH*SGQGIQPAVVKEVL
Trigger: CAGTACCTCTTTGACAACAGCTGGCTGGATGCCCTGACCAGAGCAGTGTTTGTGGAGTTCACTGTCTACAACGCTAATGTCAATCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp AGTGCTGATGTGATCATGTTCATTTTGGGATTCAATCTGAGCAGGTaGCAAAGCTTCACTGTGGACAGCAGGACGAGGAAGGCGATGATG +
Preference number: 5 (lower is better)
Translates to: SADVIMFILGFNLSR*QSFTVDSRTRKAMM
Trigger: CATCATCGCCTTCCTCGTCCTGCTGTCCACAGTGAAGCTTTGGCACCTGCTCAGATTGAATCCCAAAATGAACATGATCACATCAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp CTCTTCATAGTTGAAGATCCCCAGCTGAAGGCTGACCATTGTTTCTaGTGCATCAAAGAGGGTTTTATAGGAACGGAGTTTCCAACCAAA +
Preference number: 5 (lower is better)
Translates to: LFIVEDPQLKADHCF*CIKEGFIGTEFPTK
Trigger: TTTGGTTGGAAACTCCGTTCCTATAAAACCCTCTTTGATGCAGCAGAAACAATGGTCAGCCTTCAGCTGGGGATCTTCAACTATGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 90 bp TTCATAGTTGAAGATCCCCAGCTGAAGGCTGACCATTGTTTCTGCTaGATCAAAGAGGGTTTTATAGGAACGGAGTTTCCAACCAAATAC +
Preference number: 5 (lower is better)
Translates to: FIVEDPQLKADHCFC*IKEGFIGTEFPTKY
Trigger: GTATTTGGTTGGAAACTCCGTTCCTATAAAACCCTCTTTGATGCAGCAGAAACAATGGTCAGCCTTCAGCTGGGGATCTTCAACTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GGACACACCACCAGGGCAGGCCACGAGGGGACTTGCTaGCCCGAGACGTGCTGGGATATGCCAGTGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GHTTRAGHEGTC*PETCWDMPVPG
Trigger: CCCCGGCACTGGCATATCCCAGCACGTCTCGGGTCAGCAAGTCCCCTCGTGGCCTGCCCTGGTGGTGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GCTCTGCCGCCACCACGAAGGGATGCCAGCCATCCGTaGAGGGGTACAGGCGCAGGCTCTGCAGGGTCACGT +
Preference number: 6 (lower is better)
Translates to: ALPPPRRDASHP*RGTGAGSAGSR
Trigger: ACGTGACCCTGCAGAGCCTGCGCCTGTACCCCTTCACGGATGGCTGGCATCCCTTCGTGGTGGCGGCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp AAGGCCAGATGGCCTCCGTGCCCTTCACACCAGCCCTaGGCGCCGGGGAAGGTGTGTTCCAGCGGCACAAAC +
Preference number: 6 (lower is better)
Translates to: KARWPPCPSHQP*APGKVCSSGTN
Trigger: GTTTGTGCCGCTGGAACACACCTTCCCCGGCGCCCAGGGCTGGTGTGAAGGGCACGGAGGCCATCTGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp AGCCAGCCGACTAGGACACACCACCAGGGCAGGCCACGAGGGGACTaGCTGACCCGAGACGTGCTGGGATATGCCAGTGCCGGGGTACCA +
Preference number: 6 (lower is better)
Translates to: SQPTRTHHQGRPRGD*LTRDVLGYASAGVP
Trigger: TGGTACCCCGGCACTGGCATATCCCAGCACGTCTCGGGTCAGCAAGTCCCCTCGTGGCCTGCCCTGGTGGTGTGTCCTAGTCGGCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp CCCGCAGCCCCGACAGCGGCTCTACAAAGTACACAGTaGAGTTTCCAGAGGGGGCGGAGGCAGTGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: PAAPTAALQSTQ*SFQRGRRQCRC
Trigger: GCACCGGCACTGCCTCCGCCCCCTCTGGAAACTTCACTGTGTACTTTGTAGAGCCGCTGTCGGGGCTGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GCAGAGCACAGCTGGCTTCCCACTGGGCCGCAGGTGTaGGCTCCTCAGCACGCTGAGTCACCTCCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: AEHSWLPTGPQV*APQHAESPPSA
Trigger: TGCTGAGGGAGGTGACTCAGCGTGCTGAGGAGCTCACACCTGCGGCCCAGTGGGAAGCCAGCTGTGCTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CTCCGAAGGGCAGGTCCTCTGGGTGCAGGATCCAGGTaGGAAGATCACCTGTGGCGGCCACAGGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: LRRAGPLGAGSR*EDHLWRPQEAG
Trigger: ACCTGCCTCCTGTGGCCGCCACAGGTGATCTTCCCACCTGGATCCTGCACCCAGAGGACCTGCCCTTCGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp CAGAGGGGGCGGAGGCAGTGCCGGTGCCTTCATTGCTaGCAGCTTGGATCTTTAGGTGGTGCCTCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: QRGRRQCRCLHC*QLGSLGGASQG
Trigger: GCCCTGGGAGGCACCACCTAAAGATCCAAGCTGTCAGCAATGAAGGCACCGGCACTGCCTCCGCCCCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GTGTGGAGCAGCTGCCTCCCCACGCAGGCATTCCACTaGGCCCAGCAACGTCCGCAGGACCAGTGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: VWSSCLPTQAFH*AQQRPQDQWKF
Trigger: GAACTTCCACTGGTCCTGCGGACGTTGCTGGGCTCAGTGGAATGCCTGCGTGGGGAGGCAGCTGCTCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp TCCAGCCAGGTCCCAGAGCCTCCCACAGTGCCATTGTaGCCCGAGCCTCCCGTGAGTCCGATCCACCATTCT +
Preference number: 6 (lower is better)
Translates to: SSQVPEPPTVPL*PEPPVSPIHHS
Trigger: AGAATGGTGGATCGGACTCACGGGAGGCTCGGGGCACAATGGCACTGTGGGAGGCTCTGGGACCTGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GGGCAGGCAGAAGCAGTACTCCACAGGGCCCAGGGTTaGGGGAGTGCTGCAGGAGACAGTGAAGCTCGTCAG +
Preference number: 6 (lower is better)
Translates to: GQAEAVLHRAQG*GSAAGDSEARQ
Trigger: CTGACGAGCTTCACTGTCTCCTGCAGCACTCCCGCAACCCTGGGCCCTGTGGAGTACTGCTTCTGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp AACTGCTGGGTGTCTTCATCGGGAATGAAGGCCAGATaGCCTCCGTGCCCTTCACACCAGCCCTGGGCGCCG +
Preference number: 6 (lower is better)
Translates to: NCWVSSSGMKAR*PPCPSHQPWAP
Trigger: CGGCGCCCAGGGCTGGTGTGAAGGGCACGGAGGCCATCTGGCCTTCATTCCCGATGAAGACACCCAGCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp GCGTTGGGCATCACCAGGAAGGAGCTTCCGAAGAAGGTGAGGTGGTaGCAAAGGCAGTGTGTCTGGGAGGGGGTGGTTCGTGGGCCCACC +
Preference number: 6 (lower is better)
Translates to: ALGITRKELPKKVRW*QRQCVWEGVVRGPT
Trigger: GGTGGGCCCACGAACCACCCCCTCCCAGACACACTGCCTTTGCAACCACCTCACCTTCTTCGGAAGCTCCTTCCTGGTGATGCCCAACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp TCCCCCGTACAGGGTAAGTTTGCCCCACATGGGATAACCGCGGCGTaGGCTCTGGCTCTGGTACCGCCACGCCTGAGGGAAGCCATTGCT +
Preference number: 6 (lower is better)
Translates to: SPVQGKFAPHGITAA*ALALVPPRLREAIA
Trigger: AGCAATGGCTTCCCTCAGGCGTGGCGGTACCAGAGCCAGAGCCAACGCCGCGGTTATCCCATGTGGGGCAAACTTACCCTGTACGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GCCCAACACTCTCTTCCTCCTGGGAGAAGTTCGCGTTaGGTCCCGCCACCTCGAAGGTCAGCTCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: AQHSLPPGRSSR*VPPPRRSAPPG
Trigger: CCCTGGAGGAGCTGACCTTCGAGGTGGCGGGACTCAACGCGAACTTCTCCCAGGAGGAAGAGAGTGTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp CAGGGCCCAGGGTTGCGGGAGTGCTGCAGGAGACAGTaGAGCTCGTCAGCACAGAACCTTCCTCCGGGTCAA +
Preference number: 6 (lower is better)
Translates to: QGPGLRECCRRQ*SSSAQNLPPGQ
Trigger: TTGACCCGGAGGAAGGTTCTGTGCTGACGAGCTTCACTGTCTCCTGCAGCACTCCCGCAACCCTGGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp AGCCACATTCTCCCTCCAGGTCTGAGGGAGGCCAGATaGCCCGAGTGCACAAATAGGGGGTCTGGTGCCCGT +
Preference number: 6 (lower is better)
Translates to: SHILPPGLREAR*PECTNRGSGAR
Trigger: ACGGGCACCAGACCCCCTATTTGTGCACTCGGGGCATCTGGCCTCCCTCAGACCTGGAGGGAGAATGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp TTGGTACTGGCTACCAACAGGGCTTCAGTGGCACGCTaGAGAGCACAGCTGGCTTCCCACTGGGCCGCAGGT +
Preference number: 6 (lower is better)
Translates to: LVLATNRASVAR*RAQLASHWAAG
Trigger: ACCTGCGGCCCAGTGGGAAGCCAGCTGTGCTCTGCAGCGTGCCACTGAAGCCCTGTTGGTAGCCAGTACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GCGGAGGCAGTGCCGGTGCCTTCATTGCTGACAGCTTaGATCTTTAGGTGGTGCCTCCCAGGGCCCAGCATC +
Preference number: 6 (lower is better)
Translates to: AEAVPVPSLLTA*IFRWCLPGPSI
Trigger: GATGCTGGGCCCTGGGAGGCACCACCTAAAGATCCAAGCTGTCAGCAATGAAGGCACCGGCACTGCCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GGTGGCAGACAGAAGGTATGGAGCACCAGCAACCTCTaGTCTGTGTGGAGCAGCTGCCTCCCCACGCAGGCA +
Preference number: 6 (lower is better)
Translates to: GGRQKVWSTSNL*SVWSSCLPTQA
Trigger: TGCCTGCGTGGGGAGGCAGCTGCTCCACACAGACCAGAGGTTGCTGGTGCTCCATACCTTCTGTCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp CAGGGTAAGTTTGCCCCACATGGGATAACCGCGGCGTaGGCTCTGGCTCTGGTACCGCCACGCCTGAGGGAA +
Preference number: 6 (lower is better)
Translates to: QGKFAPHGITAA*ALALVPPRLRE
Trigger: TTCCCTCAGGCGTGGCGGTACCAGAGCCAGAGCCAACGCCGCGGTTATCCCATGTGGGGCAAACTTACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp ACAGTGAAGTTTCCAGAGGGGGCGGAGGCAGTGCCGGTGCCTTCATaGCTGACAGCTTGGATCTTTAGGTGGTGCCTCCCAGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: TVKFPEGAEAVPVPS*LTAWIFRWCLPGPS
Trigger: GCTGGGCCCTGGGAGGCACCACCTAAAGATCCAAGCTGTCAGCAATGAAGGCACCGGCACTGCCTCCGCCCCCTCTGGAAACTTCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp ACCTCGAAGGTCAGCTCCTCCAGGGTGCCACGAGCCACTGAGACATaGACCACCAAGTCCCACCCAAGCTCCACACGGTCAGAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: TSKVSSSRVPRATET*TTKSHPSSTRSEAQ
Trigger: CTGGGCTTCTGACCGTGTGGAGCTTGGGTGGGACTTGGTGGTCAATGTCTCAGTGGCTCGTGGCACCCTGGAGGAGCTGACCTTCGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp CCAGATGACTGCCCAACACTCTCTTCCTCCTGGGAGAAGTTCGCGTaGAGTCCCGCCACCTCGAAGGTCAGCTCCTCCAGGGTGCCACGA +
Preference number: 6 (lower is better)
Translates to: PDDCPTLSSSWEKFA*SPATSKVSSSRVPR
Trigger: TCGTGGCACCCTGGAGGAGCTGACCTTCGAGGTGGCGGGACTCAACGCGAACTTCTCCCAGGAGGAAGAGAGTGTTGGGCAGTCATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp CTTGACGCTGACCCAGCCACATTCTCCCTCCAGGTCTaGGGGAGGCCAGATGCCCCGAGTGCACAAATAGGG +
Preference number: 6 (lower is better)
Translates to: LDADPATFSLQV*GRPDAPSAQIG
Trigger: CCCTATTTGTGCACTCGGGGCATCTGGCCTCCCTCAGACCTGGAGGGAGAATGTGGCTGGGTCAGCGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp CTCGAAGGTCAGCTCCTCCAGGGTGCCACGAGCCACTaGGACATTGACCACCAAGTCCCACCCAAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: LEGQLLQGATSH*DIDHQVPPKLH
Trigger: GTGGAGCTTGGGTGGGACTTGGTGGTCAATGTCTCAGTGGCTCGTGGCACCCTGGAGGAGCTGACCTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CCTCTGGGTGCAGGATCCAGGTGGGAAGATCACCTGTaGCGGCCACAGGAGGCAGGTGTGTTTGGGCATCAT +
Preference number: 6 (lower is better)
Translates to: PLGAGSRWEDHL*RPQEAGVFGHH
Trigger: ATGATGCCCAAACACACCTGCCTCCTGTGGCCGCCACAGGTGATCTTCCCACCTGGATCCTGCACCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp TGCCCAACACTCTCTTCCTCCTGGGAGAAGTTCGCGTaGAGTCCCGCCACCTCGAAGGTCAGCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: CPTLSSSWEKFA*SPATSKVSSSR
Trigger: CCTGGAGGAGCTGACCTTCGAGGTGGCGGGACTCAACGCGAACTTCTCCCAGGAGGAAGAGAGTGTTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GCCTTTGCAGGAACTGCTGGGTGTCTTCATCGGGAATaGAGGCCAGATGGCCTCCGTGCCCTTCACACCAGC +
Preference number: 6 (lower is better)
Translates to: AFAGTAGCLHRE*RPDGLRALHTS
Trigger: GCTGGTGTGAAGGGCACGGAGGCCATCTGGCCTTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp TCGTGCAGGCAGGCACTTCAGGTCGAGGTAGCATGCTaGTCATGTAGGTATCCTCCCCGTAGGCGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SCRQALQVEVAC*SCRYPPRRRGW
Trigger: CCAGCCACGCCTACGGGGAGGATACCTACATGATCAGCATGCTACCTCGACCTGAAGTGCCTGCCTGCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp TTCAGGTGTCAGAAGTCCCTCCTCCGTGGGCTGCGCTaGGGGAGTCAGGTTAGGGGGTCCCTGTTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: FRCQKSLLRGLR*GSQVRGSLFLS
Trigger: AGACAGAAACAGGGACCCCCTAACCTGACTCCCTCAGCGCAGCCCACGGAGGAGGGACTTCTGACACCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GCCATACAGGGTGAGAGTCACCTTCGAAGACGTAGCTaGCCCTCGCCGGTGTCCAGTGTAGACTGTCACCAG +
Preference number: 6 (lower is better)
Translates to: AIQGESHLRRRS*PSPVSSVDCHQ
Trigger: CTGGTGACAGTCTACACTGGACACCGGCGAGGGGCAGCTACGTCTTCGAAGGTGACTCTCACCCTGTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GTCCCTGTGCTCCCGGTAGCGCTGGAGGTCGCGATCTaGCAGGATAGTTCTCTTTACAAACACCACGAGGGC +
Preference number: 6 (lower is better)
Translates to: VPVLPVALEVAI*QDSSLYKHHEG
Trigger: GCCCTCGTGGTGTTTGTAAAGAGAACTATCCTGGCAGATCGCGACCTCCAGCGCTACCGGGAGCACAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GTGACAGCGGAGTTGAGCGGTGGCAGACAGAAGGTATaGAGCACCAGCAACCTCTGGTCTGTGTGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: VTAELSGGRQKV*STSNLWSVWSS
Trigger: GCTGCTCCACACAGACCAGAGGTTGCTGGTGCTCCATACCTTCTGTCTGCCACCGCTCAACTCCGCTGTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp AGCTGCGTTCCAGATGTCGGTGGAAGTGGTAAGCATTaGGGTCCCTTTGCCCGTAGGCCACCAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SCVPDVGGSGKH*GPFARRPPAAA
Trigger: TGCTGCTGCTGGTGGCCTACGGGCAAAGGGACCCCAATGCTTACCACTTCCACCGACATCTGGAACGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp AGAATGACCTCTCCCGAGTCACAGTGCATGGTGGCGTaGTGTCCCTCACAAGCCAGGCTGCGACCAACCCCA +
Preference number: 6 (lower is better)
Translates to: RMTSPESQCMVA*CPSQARLRPTP
Trigger: TGGGGTTGGTCGCAGCCTGGCTTGTGAGGGACACAACGCCACCATGCACTGTGACTCGGGAGAGGTCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp GCAAAGAGCTCGGCAGTCTGGCGGACGTCAATGGCGTaGGGCATCACCAGGAAGGAGCTTCCGAAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: AKSSAVWRTSMA*GITRKELPKKV
Trigger: CACCTTCTTCGGAAGCTCCTTCCTGGTGATGCCCAACGCCATTGACGTCCGCCAGACTGCCGAGCTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp AGCTCTTGGCCCCTTAGGATAGCCAAATGCAGGGTGACAGCGGAGTaGAGCGGTGGCAGACAGAAGGTATGGAGCACCAGCAACCTCTGG +
Preference number: 6 (lower is better)
Translates to: SSWPLRIAKCRVTAE*SGGRQKVWSTSNLW
Trigger: CCAGAGGTTGCTGGTGCTCCATACCTTCTGTCTGCCACCGCTCAACTCCGCTGTCACCCTGCATTTGGCTATCCTAAGGGGCCAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp GGCCACCGAGGTCTCATCTCCCACGGTGACAGTGAGCAGAACGTCTaGGTCGGCTTTCACTGGCCGGCAGTTCTTCTCACAGCTGATTTG +
Preference number: 6 (lower is better)
Translates to: GHRGLISHGDSEQNV*VGFHWPAVLLTADL
Trigger: CAAATCAGCTGTGAGAAGAACTGCCGGCCAGTGAAAGCCGACCAAGACGTTCTGCTCACTGTCACCGTGGGAGATGAGACCTCGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp GAGCCTGGGCTCTGGACCTCCGAGTTGAGTTCAGAGGACACAGCCTaGGCAAACAGGAGAAGCTGTTCACGGCCACTCTCTTGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: EPGLWTSELSSEDTA*ANRRSCSRPLSWCR
Trigger: TCTGCACCAAGAGAGTGGCCGTGAACAGCTTCTCCTGTTTGCCAAGGCTGTGTCCTCTGAACTCAACTCGGAGGTCCAGAGCCCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp GTGACCACGGACAGTGATCGCAGCATAAGCTCTCTGACCTTCCGCTaGATGTCCATTCCAAGTTGCCCAGAGCCTGGGCTCTGGACCTCC +
Preference number: 6 (lower is better)
Translates to: VTTDSDRSISSLTFR*MSIPSCPEPGLWTS
Trigger: GGAGGTCCAGAGCCCAGGCTCTGGGCAACTTGGAATGGACATCAAGCGGAAGGTCAGAGAGCTTATGCTGCGATCACTGTCCGTGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp ACATACAGCATGCAGAGGCAGCCCACTGTGGTAACCACCACGGGGTaGTCCTCAAAGGTAGCAAAGAGCTCGGCAGTCTGGCGGACGTCA +
Preference number: 6 (lower is better)
Translates to: TYSMQRQPTVVTTTG*SSKVAKSSAVWRTS
Trigger: TGACGTCCGCCAGACTGCCGAGCTCTTTGCTACCTTTGAGGACAACCCCGTGGTGGTTACCACAGTGGGCTGCCTCTGCATGCTGTATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GCATGGAGAAGCAACAGGACACCCTCTGTACGCGCGTaGAGCTACTCCGAGTGGCACTGCAGAAGACCGAGT +
Preference number: 6 (lower is better)
Translates to: AWRSNRTPSVRA*SYSEWHCRRPS
Trigger: ACTCGGTCTTCTGCAGTGCCACTCGGAGTAGCTTCACGCGCGTACAGAGGGTGTCCTGTTGCTTCTCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GCATCCTGGACTAGAATGACCTCTCCCGAGTCACAGTaGATGGTGGCGTTGTGTCCCTCACAAGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ASWTRMTSPESQ*MVALCPSQARL
Trigger: CAGCCTGGCTTGTGAGGGACACAACGCCACCATGCACTGTGACTCGGGAGAGGTCATTCTAGTCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp CTCCGAGTGGCACTGCAGAAGACCGAGTACCAGATGTaGCCGTCCTGGAAGCCCGTGGAGGTTTTAGTGAAG +
Preference number: 6 (lower is better)
Translates to: LRVALQKTEYQM*PSWKPVEVLVK
Trigger: CTTCACTAAAACCTCCACGGGCTTCCAGGACGGGCACATCTGGTACTCGGTCTTCTGCAGTGCCACTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CTAGACACTGGTACTGCACCCACAGGTAGCTACCCCTaGTGGGGCACGGGTCTCCAAAGTAGGTCCCATCTA +
Preference number: 6 (lower is better)
Translates to: LDTGTAPTGSYP*WGTGLQSRSHL
Trigger: TAGATGGGACCTACTTTGGAGACCCGTGCCCCACCAGGGGTAGCTACCTGTGGGTGCAGTACCAGTGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CCGGTGCCTTCATTGCTGACAGCTTGGATCTTTAGGTaGTGCCTCCCAGGGCCCAGCATCTCCTGGATGTCT +
Preference number: 6 (lower is better)
Translates to: PVPSLLTAWIFR*CLPGPSISWMS
Trigger: AGACATCCAGGAGATGCTGGGCCCTGGGAGGCACCACCTAAAGATCCAAGCTGTCAGCAATGAAGGCACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GGGTTGTCCTCAAAGGTAGCAAAGAGCTCGGCAGTCTaGCGGACGTCAATGGCGTTGGGCATCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GLSSKVAKSSAV*RTSMALGITRK
Trigger: CTTCCTGGTGATGCCCAACGCCATTGACGTCCGCCAGACTGCCGAGCTCTTTGCTACCTTTGAGGACAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CCTCGCTCAAAAACCGCAGCATCGGGGTCTGACAGGTaGTGTGGCTCACTCTCTCCATCTGAGCCATACAGG +
Preference number: 6 (lower is better)
Translates to: PRSKTAASGSDR*CGSLSPSEPYR
Trigger: CCTGTATGGCTCAGATGGAGAGAGTGAGCCACACCACCTGTCAGACCCCGATGCTGCGGTTTTTGAGCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GCGCAAGAGCTTTCCCGGACCCTCACTTGGCGAATGTaGGCACTGCCAACCAACTTAGAGTTCCCGTCAGTG +
Preference number: 6 (lower is better)
Translates to: AQELSRTLTWRM*ALPTNLEFPSV
Trigger: CACTGACGGGAACTCTAAGTTGGTTGGCAGTGCCCACATTCGCCAAGTGAGGGTCCGGGAAAGCTCTTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp ATGCAGAGGCAGCCCACTGTGGTAACCACCACGGGGTaGTCCTCAAAGGTAGCAAAGAGCTCGGCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: MQRQPTVVTTTG*SSKVAKSSAVW
Trigger: CCAGACTGCCGAGCTCTTTGCTACCTTTGAGGACAACCCCGTGGTGGTTACCACAGTGGGCTGCCTCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp AGCCACATCAGGGAGATGGTGACATTGTCAAAGATGAAGCTCCCGTaGGGCACCACCAGCCGCAGGCCTTCTAGACACTGGTACTGCACC +
Preference number: 6 (lower is better)
Translates to: SHIREMVTLSKMKLP*GTTSRRPSRHWYCT
Trigger: GGTGCAGTACCAGTGTCTAGAAGGCCTGCGGCTGGTGGTGCCCAACGGGAGCTTCATCTTTGACAATGTCACCATCTCCCTGATGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp GCACCCAGTGATACGAGGCGTCTCCACCTTCTCGCAAAGGATCACTaGCTTCTGAGCAGTCACGTGCCACTCACTGGTCGTACACTCAGC +
Preference number: 6 (lower is better)
Translates to: APSDTRRLHLLAKDH*LLSSHVPLTGRTLS
Trigger: GCTGAGTGTACGACCAGTGAGTGGCACGTGACTGCTCAGAAGCAAGTGATCCTTTGCGAGAAGGTGGAGACGCCTCGTATCACTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp TCAAAGGTAGCAAAGAGCTCGGCAGTCTGGCGGACGTCAATGGCGTaGGGCATCACCAGGAAGGAGCTTCCGAAGAAGGTGAGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SKVAKSSAVWRTSMA*GITRKELPKKVRWL
Trigger: CAACCACCTCACCTTCTTCGGAAGCTCCTTCCTGGTGATGCCCAACGCCATTGACGTCCGCCAGACTGCCGAGCTCTTTGCTACCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp GGGAGACGAGGCCGGGTGTTCCGGAAGATCTGGACAATCAGGAGGTaGATGGGGAACATGAGGATAGAGCTCTCCAACCCGATCATCACC +
Preference number: 6 (lower is better)
Translates to: GRRGRVFRKIWTIRR*MGNMRIELSNPIIT
Trigger: GGTGATGATCGGGTTGGAGAGCTCTATCCTCATGTTCCCCATCAACCTCCTGATTGTCCAGATCTTCCGGAACACCCGGCCTCGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GCCTTCAGCAGGAACCGCCACGTGGTAGTTCCCAGATaGCTGCCCAACACTCTCTTCCTCCTGGGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: AFSRNRHVVVPR*LPNTLFLLGEV
Trigger: AACTTCTCCCAGGAGGAAGAGAGTGTTGGGCAGTCATCTGGGAACTACCACGTGGCGGTTCCTGCTGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GGTCGGCTTTCACTGGCCGGCAGTTCTTCTCACAGCTaGTTTGAGGCCCAAGGTTCAAGGGAGCAGACACGT +
Preference number: 6 (lower is better)
Translates to: GRLSLAGSSSHS*FEAQGSREQTR
Trigger: ACGTGTCTGCTCCCTTGAACCTTGGGCCTCAAATCAGCTGTGAGAAGAACTGCCGGCCAGTGAAAGCCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp CTGCATGTTCTGCAGGCCGGTGGTGACCACGGACAGTaGTCGCAGCATAAGCTCTCTGACCTTCCGCTTGAT +
Preference number: 6 (lower is better)
Translates to: LHVLQAGGDHGQ*SQHKLSDLPLD
Trigger: ATCAAGCGGAAGGTCAGAGAGCTTATGCTGCGATCACTGTCCGTGGTCACCACCGGCCTGCAGAACATGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp AGGCCTCCTGGCAATGTCCCCAGCAGAAGGGCACTCTaGAAATGGTCTATAACCCGAAGCAGCTGGGCCACA +
Preference number: 6 (lower is better)
Translates to: RPPGNVPSRRAL*KWSITRSSWAT
Trigger: TGTGGCCCAGCTGCTTCGGGTTATAGACCATTTTCAGAGTGCCCTTCTGCTGGGGACATTGCCAGGAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp TCTTTCTCCAGCTCTTGGCCCCTTAGGATAGCCAAATaGAGGGTGACAGCGGAGTTGAGCGGTGGCAGACAG +
Preference number: 6 (lower is better)
Translates to: SFSSSWPLRIAK*RVTAELSGGRQ
Trigger: CTGTCTGCCACCGCTCAACTCCGCTGTCACCCTGCATTTGGCTATCCTAAGGGGCCAAGAGCTGGAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GAGCCTCCCGTGAGTCCGATCCACCATTCTCTGTCCTaGGTAATGTGCCTTTGCAGGAACTGCTGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: EPPVSPIHHSLS*VMCLCRNCWVS
Trigger: AGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGATCGGACTCACGGGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp TCAGCAAACACTGTGAACTCCCCAGGAGAGCTGAACTaGTGGGTCACGTTGCTGGACACACTGGGAGGGTTG +
Preference number: 6 (lower is better)
Translates to: SANTVNSPGELN*WVTLLDTLGGL
Trigger: CAACCCTCCCAGTGTGTCCAGCAACGTGACCCACCAGTTCAGCTCTCCTGGGGAGTTCACAGTGTTTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GATAGCCAAATGCAGGGTGACAGCGGAGTTGAGCGGTaGCAGACAGAAGGTATGGAGCACCAGCAACCTCTG +
Preference number: 6 (lower is better)
Translates to: DSQMQGDSGVER*QTEGMEHQQPL
Trigger: CAGAGGTTGCTGGTGCTCCATACCTTCTGTCTGCCACCGCTCAACTCCGCTGTCACCCTGCATTTGGCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GGTGACAGTGAGCAGAACGTCTTGGTCGGCTTTCACTaGCCGGCAGTTCTTCTCACAGCTGATTTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: GDSEQNVLVGFH*PAVLLTADLRP
Trigger: GGGCCTCAAATCAGCTGTGAGAAGAACTGCCGGCCAGTGAAAGCCGACCAAGACGTTCTGCTCACTGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CTTCCGCTTGATGTCCATTCCAAGTTGCCCAGAGCCTaGGCTCTGGACCTCCGAGTTGAGTTCAGAGGACAC +
Preference number: 6 (lower is better)
Translates to: LPLDVHSKLPRA*ALDLRVEFRGH
Trigger: GTGTCCTCTGAACTCAACTCGGAGGTCCAGAGCCCAGGCTCTGGGCAACTTGGAATGGACATCAAGCGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GCACTGCAGAAGACCGAGTACCAGATGTGCCCGTCCTaGAAGCCCGTGGAGGTTTTAGTGAAGAACAGGTGG +
Preference number: 6 (lower is better)
Translates to: ALQKTEYQMCPS*KPVEVLVKNRW
Trigger: CCACCTGTTCTTCACTAAAACCTCCACGGGCTTCCAGGACGGGCACATCTGGTACTCGGTCTTCTGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CCCATCGGGAGACGAGGCCGGGTGTTCCGGAAGATCTaGACAATCAGGAGGTTGATGGGGAACATGAGGATA +
Preference number: 6 (lower is better)
Translates to: PIGRRGRVFRKI*TIRRLMGNMRI
Trigger: TATCCTCATGTTCCCCATCAACCTCCTGATTGTCCAGATCTTCCGGAACACCCGGCCTCGTCTCCCGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp TGGGCAACAGCGCAAGAGCTTTCCCGGACCCTCACTTaGCGAATGTGGGCACTGCCAACCAACTTAGAGTTC +
Preference number: 6 (lower is better)
Translates to: WATAQELSRTLT*RMWALPTNLEF
Trigger: GAACTCTAAGTTGGTTGGCAGTGCCCACATTCGCCAAGTGAGGGTCCGGGAAAGCTCTTGCGCTGTTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GGCCCATGGCATCCATCCAGAGAATCCTGTAATTGCTaGGCAACAGCGCAAGAGCTTTCCCGGACCCTCACT +
Preference number: 6 (lower is better)
Translates to: GPWHPSRESCNC*ATAQELSRTLT
Trigger: AGTGAGGGTCCGGGAAAGCTCTTGCGCTGTTGCCCAGCAATTACAGGATTCTCTGGATGGATGCCATGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp AGGAGCAAGTCCGCAATCTCTCCTTCCTCCCACAGCTaGTCAGACTTTTGCTCCTCGCTGAAGGCCACCAGA +
Preference number: 6 (lower is better)
Translates to: RSKSAISPSSHS*SDFCSSLKATR
Trigger: TCTGGTGGCCTTCAGCGAGGAGCAAAAGTCTGACCAGCTGTGGGAGGAAGGAGAGATTGCGGACTTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp AGGGAGATGGTGACATTGTCAAAGATGAAGCTCCCGTaGGGCACCACCAGCCGCAGGCCTTCTAGACACTGG +
Preference number: 6 (lower is better)
Translates to: REMVTLSKMKLP*GTTSRRPSRHW
Trigger: CCAGTGTCTAGAAGGCCTGCGGCTGGTGGTGCCCAACGGGAGCTTCATCTTTGACAATGTCACCATCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp AAGCTCTCTGACCTTCCGCTTGATGTCCATTCCAAGTaGCCCAGAGCCTGGGCTCTGGACCTCCGAGTTGAG +
Preference number: 6 (lower is better)
Translates to: KLSDLPLDVHSK*PRAWALDLRVE
Trigger: CTCAACTCGGAGGTCCAGAGCCCAGGCTCTGGGCAACTTGGAATGGACATCAAGCGGAAGGTCAGAGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp TCGCAGCATAAGCTCTCTGACCTTCCGCTTGATGTCCATTCCAAGTaGCCCAGAGCCTGGGCTCTGGACCTCCGAGTTGAGTTCAGAGGA +
Preference number: 6 (lower is better)
Translates to: SQHKLSDLPLDVHSK*PRAWALDLRVEFRG
Trigger: TCCTCTGAACTCAACTCGGAGGTCCAGAGCCCAGGCTCTGGGCAACTTGGAATGGACATCAAGCGGAAGGTCAGAGAGCTTATGCTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp TGTGTTCCAGCGGCACAAACTCATAGCAAGCATCTCTaGAGAACACCTGGCTCCTTGAGCAGAGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: CVPAAQTHSKHL*RTPGSLSRGCP
Trigger: GGGGCAGCCTCTGCTCAAGGAGCCAGGTGTTCTTCAGAGATGCTTGCTATGAGTTTGTGCCGCTGGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GGCGTCTCCACCTTCTCGCAAAGGATCACTTGCTTCTaGGCAGTCACGTGCCACTCACTGGTCGTACACTCA +
Preference number: 6 (lower is better)
Translates to: GVSTFSQRITCF*AVTCHSLVVHS
Trigger: TGAGTGTACGACCAGTGAGTGGCACGTGACTGCTCAGAAGCAAGTGATCCTTTGCGAGAAGGTGGAGACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp AAGCTGCTGTTCAGCAGTAGCACGGAGGAGTTGCTGTaGAGGAGGGTCAGTGATCGTGGCCAAAATCCTCGG +
Preference number: 6 (lower is better)
Translates to: KLLFSSSTEELL*RRVSDRGQNPR
Trigger: CCGAGGATTTTGGCCACGATCACTGACCCTCCTTCACAGCAACTCCTCCGTGCTACTGCTGAACAGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp AATCCCCAAAGCTGTGTCCCCTGCTGTCACATTCACTaGCAGAGCTTCACGGGAGGCCAGGCTCAGCATCTT +
Preference number: 6 (lower is better)
Translates to: NPQSCVPCCHIH*QSFTGGQAQHL
Trigger: AAGATGCTGAGCCTGGCCTCCCGTGAAGCTCTGTCAGTGAATGTGACAGCAGGGGACACAGCTTTGGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp CACCTTAACTGCCACTTGGGTCTGCTCTATGTCCCCTaGCCGATTGGTAACAGAGATGACCACTGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: HLNCHLGLLYVP*PIGNRDDHWQD
Trigger: GTCCTGCCAGTGGTCATCTCTGTTACCAATCGGGCAGGGGACATAGAGCAGACCCAAGTGGCAGTTAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GCAAACAGGAGAAGCTGTTCACGGCCACTCTCTTGGTaGAGAGCTGTGGCGATTCTCTCTGACACCATCTCC +
Preference number: 6 (lower is better)
Translates to: ANRRSCSRPLSW*RAVAILSDTIS
Trigger: GGAGATGGTGTCAGAGAGAATCGCCACAGCTCTGCACCAAGAGAGTGGCCGTGAACAGCTTCTCCTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp TATGGCCCATGGCATCCATCCAGAGAATCCTGTAATTaGTGGGCAACAGCGCAAGAGCTTTCCCGGACCCTC +
Preference number: 6 (lower is better)
Translates to: YGPWHPSRESCN*WATAQELSRTL
Trigger: GAGGGTCCGGGAAAGCTCTTGCGCTGTTGCCCAGCAATTACAGGATTCTCTGGATGGATGCCATGGGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp GCAAAGAAAGCAGCAAAGCCCAGCACCTTCAGCGGCTaGGTGATGAACACACTCTCCACAAAGGACACAGCC +
Preference number: 6 (lower is better)
Translates to: AKKAAKPSTFSG*VMNTLSTKDTA
Trigger: GGCTGTGTCCTTTGTGGAGAGTGTGTTCATCACCCAGCCGCTGAAGGTGCTGGGCTTTGCTGCTTTCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp GACAGTGATCGCAGCATAAGCTCTCTGACCTTCCGCTaGATGTCCATTCCAAGTTGCCCAGAGCCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: DSDRSISSLTFR*MSIPSCPEPGL
Trigger: GAGCCCAGGCTCTGGGCAACTTGGAATGGACATCAAGCGGAAGGTCAGAGAGCTTATGCTGCGATCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp TCCCGTGAGTCCGATCCACCATTCTCTGTCCTGGGTAATGTGCCTTaGCAGGAACTGCTGGGTGTCTTCATCGGGAATGAAGGCCAGATG +
Preference number: 6 (lower is better)
Translates to: SRESDPPFSVLGNVP*QELLGVFIGNEGQM
Trigger: CATCTGGCCTTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGATCGGACTCACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 90 bp ATGTCCATTCCAAGTTGCCCAGAGCCTGGGCTCTGGACCTCCGAGTaGAGTTCAGAGGACACAGCCTTGGCAAACAGGAGAAGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: MSIPSCPEPGLWTSE*SSEDTALANRRSCS
Trigger: TGAACAGCTTCTCCTGTTTGCCAAGGCTGTGTCCTCTGAACTCAACTCGGAGGTCCAGAGCCCAGGCTCTGGGCAACTTGGAATGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GCTGTATTCTGTCTGTGTATACAGAGATGGAAGGGGTaGCCAGGATGGCTGGAAGGCCTCCTGGCAATGTCC +
Preference number: 6 (lower is better)
Translates to: AVFCLCIQRWKG*PGWLEGLLAMS
Trigger: GGACATTGCCAGGAGGCCTTCCAGCCATCCTGGTCACCCCTTCCATCTCTGTATACACAGACAGAATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GTGAGTCCGATCCACCATTCTCTGTCCTGGGTAATGTaGCTTTGCAGGAACTGCTGGGTGTCTTCATCGGGA +
Preference number: 6 (lower is better)
Translates to: VSPIHHSLSWVM*LCRNCWVSSSG
Trigger: TCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGATCGGACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GGACACAGTCTCCAACATCGACGGACAGCCACGAGTTaGAGAGGAAATACCACTTCCGGTCCACCACAGAAT +
Preference number: 6 (lower is better)
Translates to: GHSLQHRRTATS*RGNTTSGPPQN
Trigger: ATTCTGTGGTGGACCGGAAGTGGTATTTCCTCTGCAACTCGTGGCTGTCCGTCGATGTTGGAGACTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp CCCGTGGAGGTTTTAGTGAAGAACAGGTGGCTAAACTaGTTCCTGTCCTGCTCTGTGGCCACAGGAAACACC +
Preference number: 6 (lower is better)
Translates to: PVEVLVKNRWLN*FLSCSVATGNT
Trigger: GGTGTTTCCTGTGGCCACAGAGCAGGACAGGAAGCAGTTTAGCCACCTGTTCTTCACTAAAACCTCCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp TTGGCAAACAGGAGAAGCTGTTCACGGCCACTCTCTTaGTGCAGAGCTGTGGCGATTCTCTCTGACACCATC +
Preference number: 6 (lower is better)
Translates to: LANRRSCSRPLS*CRAVAILSDTI
Trigger: GATGGTGTCAGAGAGAATCGCCACAGCTCTGCACCAAGAGAGTGGCCGTGAACAGCTTCTCCTGTTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp TGTGAGAAACTCATCATCCTTATGTCCACAGGCTCCTaGCTGTCCTCCATAGGGCAGAGGAAGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: CEKLIILMSTGS*LSSIGQRKVAA
Trigger: TGCTGCCACCTTCCTCTGCCCTATGGAGGACAGCCAGGAGCCTGTGGACATAAGGATGATGAGTTTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp TCAATATTCTGTGACAGGTTCTTCACTGGGATGGGATaGCCGCTGGAGCTGGTCAGGCGAAGTCCACCAACA +
Preference number: 6 (lower is better)
Translates to: SIFCDRFFTGMG*PLELVRRSPPT
Trigger: TGTTGGTGGACTTCGCCTGACCAGCTCCAGCGGCCATCCCATCCCAGTGAAGAACCTGTCACAGAATATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp AACACCCGTGTAACTGTGTCCCACCTTAACTGCCACTaGGGTCTGCTCTATGTCCCCTGCCCGATTGGTAAC +
Preference number: 6 (lower is better)
Translates to: NTRVTVSHLNCH*GLLYVPCPIGN
Trigger: GTTACCAATCGGGCAGGGGACATAGAGCAGACCCAAGTGGCAGTTAAGGTGGGACACAGTTACACGGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp AGGACACAGTCTCCAACATCGACGGACAGCCACGAGTaGCAGAGGAAATACCACTTCCGGTCCACCACAGAA +
Preference number: 6 (lower is better)
Translates to: RTQSPTSTDSHE*QRKYHFRSTTE
Trigger: TTCTGTGGTGGACCGGAAGTGGTATTTCCTCTGCAACTCGTGGCTGTCCGTCGATGTTGGAGACTGTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp TGTGACCGTGATGTTCCCGATGTCCAAGCTCAGTTCTaGGAAAGCGTTCCGCACATGTACGGTGACCAGGAA +
Preference number: 6 (lower is better)
Translates to: CDRDVPDVQAQF*ESVPHMYGDQE
Trigger: TTCCTGGTCACCGTACATGTGCGGAACGCTTTCTCAGAACTGAGCTTGGACATCGGGAACATCACGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp TCATTGTCCTCCAGGACTACGACTTTCACCTTAGCCTaGTCCTGTATGTCCTTCCTCCTGGCCCAGATCAGC +
Preference number: 6 (lower is better)
Translates to: SLSSRTTTFTLA*SCMSFLLAQIS
Trigger: GCTGATCTGGGCCAGGAGGAAGGACATACAGGATCAGGCTAAGGTGAAAGTCGTAGTCCTGGAGGACAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp CATTCTCTGTCCTGGGTAATGTGCCTTTGCAGGAACTaGTGGGTGTCTTCATCGGGAATGAAGGCCAGATGG +
Preference number: 6 (lower is better)
Translates to: HSLSWVMCLCRN*WVSSSGMKARW
Trigger: CCATCTGGCCTTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp TGCCAAGTGAACTCAATTTTGCCCAGATCCATCTTCTaGTCGGCTGGGTCCTTAGGGACACCCCAGAACATG +
Preference number: 6 (lower is better)
Translates to: CQVNSILPRSIF*SAGSLGTPQNM
Trigger: CATGTTCTGGGGTGTCCCTAAGGACCCAGCCGAGCAGAAGATGGATCTGGGCAAAATTGAGTTCACTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp CCGCTCTTTGCTTCAGCATTTATTCCCGACAGTTCTTaGAGACTGGAAGAGGCTGTGACCGTGATGTTCCCG +
Preference number: 6 (lower is better)
Translates to: PLFASAFIPDSS*RLEEAVTVMFP
Trigger: CGGGAACATCACGGTCACAGCCTCTTCCAGTCTCCAAGAACTGTCGGGAATAAATGCTGAAGCAAAGAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp AGGCGAAGTCCACCAACAGTCCCACTGACATCAAATTaGCTTCGGGAAGGGAAGGGGTTCTGTGAGAAACTC +
Preference number: 6 (lower is better)
Translates to: RRSPPTVPLTSN*LREGKGFCEKL
Trigger: GAGTTTCTCACAGAACCCCTTCCCTTCCCGAAGCCAATTTGATGTCAGTGGGACTGTTGGTGGACTTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CCA 72 bp TATGTCCCCTGCCCGATTGGTAACAGAGATGACCACTaGCAGGACAAAGCCATCCTTTTCTTCTCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: YVPCPIGNRDDH*QDKAILFFSKW
Trigger: CCACTTGGAGAAGAAAAGGATGGCTTTGTCCTGCCAGTGGTCATCTCTGTTACCAATCGGGCAGGGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp TCCGATCCACCATTCTCTGTCCTGGGTAATGTGCCTTaGCAGGAACTGCTGGGTGTCTTCATCGGGAATGAA +
Preference number: 6 (lower is better)
Translates to: SDPPFSVLGNVP*QELLGVFIGNE
Trigger: TTCATTCCCGATGAAGACACCCAGCAGTTCCTGCAAAGGCACATTACCCAGGACAGAGAATGGTGGATCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp TCCGCTCTTTGCTTCAGCATTTATTCCCGACAGTTCTaGGAGACTGGAAGAGGCTGTGACCGTGATGTTCCC +
Preference number: 6 (lower is better)
Translates to: SALCFSIYSRQF*ETGRGCDRDVP
Trigger: GGGAACATCACGGTCACAGCCTCTTCCAGTCTCCAAGAACTGTCGGGAATAAATGCTGAAGCAAAGAGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp GACATCAAATTGGCTTCGGGAAGGGAAGGGGTTCTGTaGGAAACTCATCATCCTTATGTCCACAGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: DIKLASGREGVL*ETHHPYVHRLL
Trigger: CAGGAGCCTGTGGACATAAGGATGATGAGTTTCTCACAGAACCCCTTCCCTTCCCGAAGCCAATTTGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp ACCAACTTAGAGTTCCCGTCAGTGACAAAGCCTGGGTaGTGGCCATATAGGTTCTTCACGAGTGTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: TNLEFPSVTKPG*WPYRFFTSVVL
Trigger: CAACACCACACTCGTGAAGAACCTATATGGCCATCACCCAGGCTTTGTCACTGACGGGAACTCTAAGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp TTAGTGAAGAACAGGTGGCTAAACTGCTTCCTGTCCTaGTCTGTGGCCACAGGAAACACCTTATCCAGGACA +
Preference number: 6 (lower is better)
Translates to: LVKNRWLNCFLS*SVATGNTLSRT
Trigger: TGTCCTGGATAAGGTGTTTCCTGTGGCCACAGAGCAGGACAGGAAGCAGTTTAGCCACCTGTTCTTCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GACATTAGCGTTGTAGACAGTGAACTCCACAAACACTaGTCTGGTCAGGGCATCCAGCCAGCTGTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: DISVVDSELHKH*SGQGIQPAVVK
Trigger: TTTGACAACAGCTGGCTGGATGCCCTGACCAGAGCAGTGTTTGTGGAGTTCACTGTCTACAACGCTAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp CAGGCACGGCGCAGTGCTGATGTGATCATGTTCATTTaGGGATTCAATCTGAGCAGGTGCCAAAGCTTCACT +
Preference number: 6 (lower is better)
Translates to: QARRSADVIMFI*GFNLSRCQSFT
Trigger: AGTGAAGCTTTGGCACCTGCTCAGATTGAATCCCAAAATGAACATGATCACATCAGCACTGCGCCGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GTGATCATGTTCATTTTGGGATTCAATCTGAGCAGGTaGCAAAGCTTCACTGTGGACAGCAGGACGAGGAAG +
Preference number: 6 (lower is better)
Translates to: VIMFILGFNLSR*QSFTVDSRTRK
Trigger: CTTCCTCGTCCTGCTGTCCACAGTGAAGCTTTGGCACCTGCTCAGATTGAATCCCAAAATGAACATGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS TCA 72 bp ACTTGCTGCAAAAGTAACCCCACTTCTGCTTCCTCATaGGCTTGCCCTGCACCACCATATAGTAGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: TCCKSNPTSASS*ACPAPPYSRRE
Trigger: TTCTCTTCTACTATATGGTGGTGCAGGGCAAGCTCATGAGGAAGCAGAAGTGGGGTTACTTTTGCAGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS CAA 72 bp TACAGTTCAGGCTCGGTGAATACCTTCATGTCCTGTTaGTGTCCGCTCTTTGCTTCAGCATTTATTCCCGAC +
Preference number: 6 (lower is better)
Translates to: YSSGSVNTFMSC*CPLFASAFIPD
Trigger: GTCGGGAATAAATGCTGAAGCAAAGAGCGGACACAAACAGGACATGAAGGTATTCACCGAGCCTGAACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9
CDS GCA 72 bp GGTGAATACCTTCATGTCCTGTTTGTGTCCGCTCTTTaGTTCAGCATTTATTCCCGACAGTTCTTGGAGACT +
Preference number: 6 (lower is better)
Translates to: GEYLHVLFVSAL*FSIYSRQFLET
Trigger: AGTCTCCAAGAACTGTCGGGAATAAATGCTGAAGCAAAGAGCGGACACAAACAGGACATGAAGGTATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098375.6
ENSMUST00000109093.9