RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKD1L1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046634

Ensembl transcript IDs: ENSMUST00000154153.8, ENSMUST00000178195.2

Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTACACCACACCAGGCCTaGCCGCTGGCCACTTGGGTC +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSTPHQA*PLATWV
Trigger: GACCCAAGTGGCCAGCGGCCAGGCCTGGTGTGGTGT...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTGCCTTGGATGGTGTCTaGGCCCAGCGCAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPALDGV*AQRRWR
Trigger: ACGCCACCTGCGCTGGGCTCAGACACCATCCAAGGC...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGCCACAGTGCATGGCTaGACCTTGGAGCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPATVHG*TLEPWP
Trigger: TGGCCACGGCTCCAAGGTGCAGCCATGCACTGTGGC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCGCTGTGCAAGTCCAGTaGTACCTGAGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPAVQVQ*YLRAAP
Trigger: AGGGGCTGCTCTCAGGTATCACTGGACTTGCACAGC...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCGGTCCCAGGAATACGTaGGGTCTGGGACATCTCCAC +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPGPRNT*GLGHLH
Trigger: GTGGAGATGTCCCAGACCTCACGTATTCCTGGGACC...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTGCCTGCCACAGCTCCTaGAGCAGGAACGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGACHSS*SRNVVA
Trigger: GGCCACCACGTTCCTGCTTCAGGAGCTGTGGCAGGC...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCAGGCCACAGAGCTTaGCCAGAGCAGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLPGHRA*PEQTDP
Trigger: AGGGTCTGTCTGCTCTGGTCAAGCTCTGTGGCCTGG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTACAGGCCAGGGAAGCTaGTCCAGAGATAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPTGQGS*SRDSPG
Trigger: GCCTGGGCTATCTCTGGATCAGCTTCCCTGGCCTGT...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGCTGTGTCACCAAGGTaGCCCTGGGAGGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPAVSPR*PWEDAE
Trigger: CTCAGCATCCTCCCAGGGCCACCTTGGTGACACAGC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTTTCACTGGGGGTGGTTaGCAAGGCTCCCGCACGATG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPFTGGG*QGSRTM
Trigger: CATCGTGCGGGAGCCTTGCCAACCACCCCCAGTGAA...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGAGAGGTTGCAGGTGTaGGAAATGCCAGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSERLQV*EMPGGG
Trigger: CCCTCCTCCTGGCATTTCTCACACCTGCAACCTCTC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCGGCATTTACCAGGGCTaGGGCAGTGGACACAAGTCG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLGIYQG*GSGHKS
Trigger: CGACTTGTGTCCACTGCCTCAGCCCTGGTAAATGCC...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCAAGTCCAGTGATACCTaGGAGCAGCCCCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPKSSDT*EQPLGC
Trigger: ACAACCCAGGGGCTGCTCTCAGGTATCACTGGACTT...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCGGAAGCCAGTGTCGATaGCGACTGCATACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPGSQCR*RLHTAG
Trigger: ACCAGCTGTATGCAGTCGTCATCGACACTGGCTTCC...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTACAGCCAGCCAGCACTaGGCAGAGAAGAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPTASQH*AEKNQA
Trigger: AGCCTGGTTCTTCTCTGCTCAGTGCTGGCTGGCTGT...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTTCAGGGCTGCCTGCATaGTGCTCTCTCTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPSGLPA*CSLSSV
Trigger: GACTGAGGAGAGAGAGCATCATGCAGGCAGCCCTGA...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCGCCCTCTGATGCCATaGCACCATCAGGCCGATGTC +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPRPLMP*HHQADV
Trigger: GACATCGGCCTGATGGTGTCATGGCATCAGAGGGCG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCCATGTTCTTCACTaGGGGTGGTTGGCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLPHVLH*GWLARL
Trigger: GAGCCTTGCCAACCACCCCCAGTGAAGAACATGGGG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTCCCTCGCATCCTCTTTaGCAGCTTCCCAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSPSHPL*QLPRLQ
Trigger: CTGGAGTCTGGGAAGCTGCCAAAGAGGATGCGAGGG...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGGAGAAGGTCTGATGTaGGATGTGGTGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPGEGLM*DVVRAA
Trigger: GGCAGCCCTCACCACATCCCACATCAGACCTTCTCC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGAGCTTAGCCTTGGATaGTGTCTGAGCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPELSLG*CLSPAQ
Trigger: CTGCGCTGGGCTCAGACACCATCCAAGGCTAAGCTC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTTGGGAGGATGCTGAGTaGGAGGACTGGAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPWEDAE*EDWNSQ
Trigger: CTGAGAGTTCCAGTCCTCTCACTCAGCATCCTCCCA...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTTTCACACGGTACCACTaGGGGACGCTCAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSFTRYH*GTLSLL
Trigger: AAGAAGGCTGAGCGTCCCTCAGTGGTACCGTGTGAA...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTAGATGTGGACGAATCTaGAGGCCAAGTCAGGACGGG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPRCGRI*RPSQDG
Trigger: CCCGTCCTGACTTGGCCTTCAGATTCGTCCACATCT...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGGGCCAGTCGATCATaGGAGTTGGCTTTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPWASRS*ELALLY
Trigger: GTAGAGCAAAGCCAACTCTCATGATCGACTGGCCCA...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTTCTGGATAGAGCTCTaGGGGCTACGATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPFWIEL*GLRWRR
Trigger: CCTTCTCCATCGTAGCCCTCAGAGCTCTATCCAGAA...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCTTCTGGATGGGGGCTaGCTGTACAGTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPLLDGG*LYSESQ
Trigger: CTGGCTCTCACTGTACAGTCAGCCCCCATCCAGAAG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCGCACCTGAAGAGCAGTaGCAGAAGCTGTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLAPEEQ*QKLCNW
Trigger: CCAGTTGCACAGCTTCTGTCACTGCTCTTCAGGTGC...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCTGGAATCATGGCCCTaGGGTGTCTCTGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPLESWP*GVSVFT
Trigger: AGTGAAGACAGAGACACCTCAGGGCCATGATTCCAG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCTCCATTGGGAACGGTaGACAGACCACAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLLHWER*TDHSTA
Trigger: AGCAGTGCTGTGGTCTGTTCACCGTTCCCAATGGAG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTAGTCTTCTGTGCTGCTaGGGTCCCCCAAGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSSLLCC*GPPRSD
Trigger: ATCACTCCTTGGGGGACCTCAGCAGCACAGAAGACT...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCTGCCGAGGTGCCATGTaGCAGTGTCCCGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFCRGAM*QCPGEE
Trigger: CTCTTCACCGGGACACTGTCACATGGCACCTCGGCA...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCGGCTGGAGGAGCTGCTaGCCAACTCAATGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLGWRSC*PTQWCH
Trigger: ATGACACCATTGAGTTGGGCAGCAGCTCCTCCAGCC...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGATCCACTACTGTCGTaGCAGAGGCGGATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSDPLLS*QRRIFW
Trigger: CCAGAAGATCCGCCTCTGGCACGACAGTAGTGGATC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCAACAGACCACAGCACTaGTGCTGGCTGCTATCCTCC +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLNRPQH*CWLLSS
Trigger: GGAGGATAGCAGCCAGCAGCAGTGCTGTGGTCTGTT...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCCACCACATACACTGTaGTGGCACAAACCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPPPHTL*WHKPVA
Trigger: GGCTACTGGTTTGTGCCAGCACAGTGTATGTGGTGG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTTCTCTCAGGGCTGCCTaGATGATGCTCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPSLRAA*MMLSLL
Trigger: GAGGAGAGAGAGCATCATGCAGGCAGCCCTGAGAGA...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTTGTGCCTCTCTGCTGTaGGAGGGAGTCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSCASLL*EGVSKG
Trigger: TCCTTTGCTGACTCCCTCCCACAGCAGAGAGGCACA...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGGTGGCCACCAGCTGTaGACTCAGCAGAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSGGHQL*TQQKCF
Trigger: GAAGCATTTCTGCTGAGTCCACAGCTGGTGGCCACC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGCACCTTGGAGCCGTaGCCATCTGTGATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPCTLEP*PSVISV
Trigger: AACTGAGATCACAGATGGCCACGGCTCCAAGGTGCA...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCACCGCCACAGTGCATaGCTGCACCTTGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFHRHSA*LHLGAV
Trigger: CACGGCTCCAAGGTGCAGCCATGCACTGTGGCGGTG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCAGAGCTGGAAGTGCCTaGGCATCTGTTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLRAGSA*ASVSGK
Trigger: CTTCCCAGAAACAGATGCTCAGGCACTTCCAGCTCT...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCTGGAGAACTGGCCTTaGGCAAGGAACATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLLENWP*ARNILV
Trigger: CACCAAGATGTTCCTTGCTCAAGGCCAGTTCTCCAG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTGAGGGTTGTAGAGAGTaGAGTGCACAGACATGGCCC +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPEGCRE*SAQTWP
Trigger: GGGCCATGTCTGTGCACTTCACTCTCTACAACCCTC...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCTGCAGGTGTGAGAAATaGCAGGAGGAGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLCRCEK*QEEGWR
Trigger: TCTCCAACCCTCCTCCTGGCATTTCTCACACCTGCA...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCAGGATGATACCAGGATaGAGAGAGGTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPRMIPG*REVAGV
Trigger: CACACCTGCAACCTCTCTGCATCCTGGTATCATCCT...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCAGTCACCGCCACAGTaGATGGCTGCACCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFQSPPQ*MAAPWS
Trigger: GCTCCAAGGTGCAGCCATGCACTGTGGCGGTGACTG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCACTGTGTTGAAGCCTaGATATCCCCTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPHCVEA*ISPLAS
Trigger: GGAAGCCAGAGGGGATATGCAGGCTTCAACACAGTG...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTGCTCATCTAGCAGTGTaGTCAGCGTCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGAHLAV*SASSPT
Trigger: GGTGGGACTGGACGCTGAGCACACTGCTAGATGAGC...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTACGGATTCCCAGAGCTaGAAGTGCCTGAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSTDSQS*KCLSIC
Trigger: ACAGATGCTCAGGCACTTCCAGCTCTGGGAATCCGT...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTTTGCTGGGAAGGAAATaGCAGGAGCTTGCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSLLGRK*QELACP
Trigger: TGGACACGCAAGCTCCTGCCATTTCCTTCCCAGCAA...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTAGTCAGTGGAAGAGCTaGGGGAGGGCCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFSQWKS*GRASFP
Trigger: AGGGAAGCTGGCCCTCCCCCAGCTCTTCCACTGACT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTCAGCACTCAGGCTTaGTCCTGCTTCCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPLSTQA*SCFLEV
Trigger: AACTTCCAGGAAGCAGGACCAAGCCTGAGTGCTGAG...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTTCCTTCACCATCACGTaGCTGATGAACCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPSFTIT*LMNQHG
Trigger: CCCATGCTGGTTCATCAGCCACGTGATGGTGAAGGA...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTCAGAAGCTGTGCAACTaGACAGGCCAGGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGQKLCN*TGQEGA
Trigger: TGCACCCTCCTGGCCTGTCCAGTTGCACAGCTTCTG...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCAGGAGCTTGTGAACTaGGAGGAGAGTAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPQELVN*EESNGS
Trigger: AGAGCCATTACTCTCCTCCCAGTTCACAAGCTCCTG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCAAGCAGATCATGAGTaGCTGGGTGATGAATGCGCA +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPQADHE*LGDECA
Trigger: TGCGCATTCATCACCCAGCCACTCATGATCTGCTTG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTGTCATCCCCCAGAGCTaGAAACAGAGGTGGATCACG +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPVIPQS*KQRWIT
Trigger: CGTGATCCACCTCTGTTTCCAGCTCTGGGGGATGAC...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGTACACAGTCTCATCTaGGCTCCACAATTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPVHSLI*APQLSP
Trigger: TGGGGACAATTGTGGAGCTCAGATGAGACTGTGTAC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCATCAGTGCCAAAGTTaGGCCTGCACTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPHQCQS*ACTQRT
Trigger: TGTCCTTTGAGTGCAGGCTCAACTTTGGCACTGATG...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCTGTAGCTTGGGAGCATaGTGGTCTGTCTGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFCSLGA*WSVCGC
Trigger: ACACCCGCAGACAGACCATCATGCTCCCAAGCTACA...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCTTTGTGTTGCCTCTTaGGTAGTACTGTGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPLCVAS*VVLCKE
Trigger: CTCCTTGCACAGTACTACTCAAGAGGCAACACAAAG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTTTCCTGGGAGTTTTCTaGAAGCCCAGTAAACCGGTG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPFLGVF*KPSKPV
Trigger: CACCGGTTTACTGGGCTTTCAGAAAACTCCCAGGAA...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCCACCAGCAAGACTCTaGAGAGAGGAAAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPPPARL*REENRS
Trigger: TGACCTGTTTTCCTCTCTTCAGAGTCTTGCTGGTGG...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCCAGCCCCAGAAGGGTaGGGACTTTATGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFPAPEG*GLYAMC
Trigger: ACACATGGCATAAAGTCCTCACCCTTCTGGGGCTGG...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTAGGATGCAGAGAGGTTaGAGGTGTGAGAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPRMQRG*RCEKCQ
Trigger: CTGGCATTTCTCACACCTGCAACCTCTCTGCATCCT...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGCCAGTCACAGTAGTTaGACCTGCCAATGTACACAG +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSASHSS*TCQCTQ
Trigger: CTGTGTACATTGGCAGGTGCAACTACTGTGACTGGC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCATGGCTGGAGGAGCTaGTGCCCAACTCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFHGWRS*CPTQWC
Trigger: ACACCATTGAGTTGGGCAGCAGCTCCTCCAGCCATG...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGGACTCAGCAGAAATaGTTCCCAGGTTGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPWTQQK*FPGWKE
Trigger: CTCTTTCCAACCTGGGAAGCATTTCTGCTGAGTCCA...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCATGGCCACCCAATTTaGTCACAGCCAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFHGHPI*SQPAST
Trigger: AGTGCTGGCTGGCTGTGAGCAAATTGGGTGGCCATG...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCGGATGTGGTGAGGGCTaGCTTGAATCTGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFGCGEG*LESGLP
Trigger: TGGGAGACCAGATTCAAGGCAGCCCTCACCACATCC...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCAGACCACAGCACTGCTaGTGGCTGCTATCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFRPQHC*WLLSSK
Trigger: CTTGGAGGATAGCAGCCAGCAGCAGTGCTGTGGTCT...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCCTATTAGGTGGCATTaGCCTCCAAGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFPIRWH*PPRAPG
Trigger: GCCTGGAGCTCTTGGAGGGCAATGCCACCTAATAGG...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCACTCAAAGGACACATTaGCATTTACCAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPTQRTH*HLPGLR
Trigger: CCTCAGCCCTGGTAAATGCCAATGTGTCCTTTGAGT...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCACTGAGCCATTTTGCTaGGAAGGAAATGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLTEPFC*EGNGRS
Trigger: GCTCCTGCCATTTCCTTCCCAGCAAAATGGCTCAGT...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGGAATACGTGAGGTCTaGGACATCTCCACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPGIREV*DISTVF
Trigger: GAAGACTGTGGAGATGTCCCAGACCTCACGTATTCC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCCTGGAAGTTTGTACTaGTCCCTGGTTGTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPPGSLY*SLVVFL
Trigger: TAGGAAGACAACCAGGGACCAGTACAAACTTCCAGG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGCTGATGAACCAGCATaGGGAAGATCCACTACTGTC +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSADEPA*GRSTTV
Trigger: GACAGTAGTGGATCTTCCCCATGCTGGTTCATCAGC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCAGAAACCGAGACCATaGCTCAGGCAGAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPQKPRP*LRQKNS
Trigger: AGAATTCTTCTGCCTGAGCCATGGTCTCGGTTTCTG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTCCACAGCACTGCTGCTaGCTGCTATCCTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGPQHCC*LLSSKL
Trigger: AAGCTTGGAGGATAGCAGCCAGCAGCAGTGCTGTGG...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTCTCCAGCCAGTGTCTTaGTTTTCTCCAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSLQPVS*FSPVAE
Trigger: CTCAGCTACTGGAGAAAACCAAGACACTGGCTGGAG...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCTGGCCACTTGGGTCTaGGAAATAAAGGACACATTG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLLATWV*EIKDTL
Trigger: CAATGTGTCCTTTATTTCTCAGACCCAAGTGGCCAG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCTGGCTGATATAGCATaGGCTTTGTGTTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLLADIA*ALCCLL
Trigger: CAAGAGGCAACACAAAGCTCATGCTATATCAGCCAG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGAGCAGACAGACCCTTaGCTTCTGGGACCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFEQTDP*LLGPKF
Trigger: GAACTTGGGTCCCAGAAGTCAAGGGTCTGTCTGCTC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTAAAGCAGCAGTAGCATaGTGCTGTGTGTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSKAAVA*CCVWSC
Trigger: ACATGACCACACACAGCATCATGCTACTGCTGCTTT...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTTTCACTGAGCCATTTTaGTGGGAAGGAAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSFTEPF*WEGNGR
Trigger: CCTGCCATTTCCTTCCCAGCAAAATGGCTCAGTGAA...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGAAGGGGACTTCCACTaGACTCTTCTCTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPEGDFH*TLLCCI
Trigger: AATGCAACAGAGAAGAGTGCAGTGGAAGTCCCCTTC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGACAGGCCAGGAGGGTaGACAGTAGAGCCATACAGA +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFDRPGG*TVEPYR
Trigger: TCTGTATGGCTCTACTGTGCACCCTCCTGGCCTGTC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTAGCACTGCTGCTGGCTaGTATCCTCCAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFSTAAG*YPPSLV
Trigger: GACCAAGCTTGGAGGATAGCAGCCAGCAGCAGTGCT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGTTCTTCAAAACCACTaGCAGGAGCTTGTGAACTGG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPVLQNH*QELVNW
Trigger: CCAGTTCACAAGCTCCTGGCAGTGGTTTTGAAGAAC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCAGCAAAGACAAGTGCTaGCAAGCAGATCATGAGTGG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLSKDKC*QADHEW
Trigger: CCACTCATGATCTGCTTGGCAGCACTTGTCTTTGCT...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTAGTCACTGTAGAAGATaGGGAAGGACTCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPSHCRR*GRTLPG
Trigger: TCCTGGTAGAGTCCTTCCGCATCTTCTACAGTGACT...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTTGCACCCTGATGAGGTaGGGTTCAGAGACCACACTG +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFCTLMR*GSETTL
Trigger: CAGTGTGGTCTCTGAACCCCACCTCATCAGGGTGCA...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTAAATGCTTCCCAGGTTaGAAAGAGCTGTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPKCFPG*KELSSP
Trigger: TGGGCTGGACAGCTCTTTCCAACCTGGGAAGCATTT...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGTCGATCATGAGAGTTaGCTTTGCTCTACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPVDHES*LCSTCV
Trigger: CACACAGGTAGAGCAAAGCCAACTCTCATGATCGAC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCGACTAGCAACCTCCTaGAGAACTGGCCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFRLATS*RTGLEQ
Trigger: TTGCTCAAGGCCAGTTCTCCAGGAGGTTGCTAGTCG...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTAATCTGGTCTCCCACTaGAATCATGGCCCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGNLVSH*NHGPEV
Trigger: CACCTCAGGGCCATGATTCCAGTGGGAGACCAGATT...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCGAGAGAAATTTCACCTaGGCAGAATCTCCCATATGC +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPERNFT*AESPIC
Trigger: GCATATGGGAGATTCTGCCCAGGTGAAATTTCTCTC...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGGTCACAGCATTCACTaGGCCATTTTGCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFGHSIH*AILLGR
Trigger: CCTTCCCAGCAAAATGGCTCAGTGAATGCTGTGACC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTAAAGTTGACCCATaGGATGTGGACGAATCTGAA +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPSKVDP*DVDESE
Trigger: TTCAGATTCGTCCACATCTCATGGGTCAACTTTAGA...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTCTTCTCTGTTGCATTaGCTAGGAAGAGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGSSLLH*LGRGPR
Trigger: CCTGGGACCTCTTCCTAGTCAATGCAACAGAGAAGA...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTACTGCCAGGAGCTTGTaGACTGGGAGGAGAGTAATG +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFTARSL*TGRRVM
Trigger: CATTACTCTCCTCCCAGTTCACAAGCTCCTGGCAGT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCGTTTTCTCCAGTAGCTaGGGATGCCCTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFVFSSS*GCPWLS
Trigger: TGACAACCAAGGGCATCCTCAGCTACTGGAGAAAAC...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCTTCTTCCAGGAAATTaGAGCAGTAGCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLLLPGN*SSSPGN
Trigger: ATTTCCTGGGCTACTGCTTCAATTTCCTGGAAGAAG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCACAGTAGTTGCACCTaGCAATGTACACAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLHSSCT*QCTQSH
Trigger: ATGAGACTGTGTACATTGGCAGGTGCAACTACTGTG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCAAGCAAAGACAAGTaGTGCCAAGCAGATCATGAG +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPPSKDK*CQADHE
Trigger: CTCATGATCTGCTTGGCAGCACTTGTCTTTGCTTGG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTTTGACCCATGAGATGTaGACGAATCTGAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPLTHEM*TNLKAK
Trigger: CTTGGCCTTCAGATTCGTCCACATCTCATGGGTCAA...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTTCCCAGAACACACATTaGATCCACTGGAAATGCACT +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSSQNTH*IHWKCT
Trigger: AGTGCATTTCCAGTGGATCCAATGTGTGTTCTGGGA...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTACGGTACAGGGTATGTaGGGAAGTGTTTCCTATCCG +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFTVQGM*GSVSYP
Trigger: CGGATAGGAAACACTTCCTCACATACCCTGTACCGT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTACATCTTGGTGTATTTaGAGATGCACATGGCACTCG +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPTSWCI*RCTWHS
Trigger: CGAGTGCCATGTGCATCTTCAAATACACCAAGATGT...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTCCCAGACTCCAGAGATaGGAAGGACAAATTCAACTC +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGPRLQR*EGQIQL
Trigger: GAGTTGAATTTGTCCTTCTCATCTCTGGAGTCTGGG...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTCCTCCAGGTACTCAGTaGACTTTGAATAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSPPGTQ*TLNRKA
Trigger: AGCTTTTCTATTCAAAGTTCACTGAGTACCTGGAGG...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTAGGTCCCCCAAGGAGTaGTTGGCCTTTCTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGRSPKE*LAFLVN
Trigger: ATTTACAAGAAAGGCCAATCACTCCTTGGGGGACCT...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGGTGCTTAGAGAGCTaGGAAGATGAACATATTTCA +
Preference number: 4 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPWCLES*EDEHIS
Trigger: TGAAATATGTTCATCTTCTCAGCTCTCTAAGCACCA...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCACCAACACAGTAGTTaGTATACACCATGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPHQHSS*YTPCFP
Trigger: AGGGAAGCATGGTGTATAGCAACTACTGTGTTGGTG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGAAACTCAGAAATGCTaGTCACTTCAAGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSETQKC*SLQEWH
Trigger: ATGCCACTCTTGAAGTGAGCAGCATTTCTGAGTTTC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCTCTGAAACTCAGAAATaGTGCTCACTTCAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLSETQK*CSLQEW
Trigger: CCACTCTTGAAGTGAGCAGCATTTCTGAGTTTCAGA...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCAAGAACCAAGAGAAATaGACTGAAAATACCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLKNQEK*TENTGE
Trigger: CTCCCCGGTATTTTCAGTGCATTTCTCTTGGTTCTT...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTTCAAGGTCATTGCTGTaGATAGGAAGTACATCTTCC +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSSRSLL*IGSTSS
Trigger: GGAAGATGTACTTCCTATGCACAGCAATGACCTTGA...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCTGGGAAGCAGCAGATaGCAAAGTGCTCAACATTTT +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPLGSSR*QSAQHF
Trigger: AAAATGTTGAGCACTTTGCCATCTGCTGCTTCCCAG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTGCTGCCCAACTCAATaGTGTCATCTCCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGCCPTQ*CHLQSS
Trigger: GGAACTTTGGAGATGACACCATTGAGTTGGGCAGCA...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTAGTGTCACAAGGAACTaGTCACAGCATTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGSVTRN*SQHSLS
Trigger: GCTCAGTGAATGCTGTGACCAGTTCCTTGTGACACT...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTCAACACAAACATGGCTaGATTTCTCTTGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSQHKHG*ISLVQV
Trigger: TACCTGCACAAGAGAAATCCAGCCATGTTTGTGTTG...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTATTGGCTCCTTTCCATaGAGCAGCAGGTACATACAT +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPIGSFP*SSRYIH
Trigger: ATGTATGTACCTGCTGCTCCATGGAAAGGAGCCAAT...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCAGACCCTTGACTTCTaGGACCCAAGTTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPQTLDF*DPSSSK
Trigger: TTTTGAAGAACTTGGGTCCCAGAAGTCAAGGGTCTG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCCAGGGGACACATTTTaGTTCTCAAGGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFPGDTF*FSRSRS
Trigger: TGACCTTGACCTTGAGAACCAAAATGTGTCCCCTGG...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTAAAGTCCGGTTTCCCTaGCATGCAGAAGACACTGAA +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFKVRFP*HAEDTE
Trigger: TTCAGTGTCTTCTGCATGTCAGGGAAACCGGACTTT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGATGGTAGCTGCAGTTaGCTTTTTCAGGAGACGATC +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFDGSCS*LFQETI
Trigger: GATCGTCTCCTGAAAAAGTCAACTGCAGCTACCATC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCAAGAGAAATGCACTaGAAATACCGGGGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFPREMH*KYRGAS
Trigger: ACTTGCTCCCCGGTATTTTCAGTGCATTTCTCTTGG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTACGAGAGGTTTTCTGTaGGAAGACTTTCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPTRGFL*EDFLFW
Trigger: CCAAAACAGAAAGTCTTCTCACAGAAAACCTCTCGT...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCATATGTCTTGCCACTaGTCAGTGAGAATGGTTTTA +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLHMSCH*SVRMVL
Trigger: TAAAACCATTCTCACTGAGCAGTGGCAAGACATATG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTAGTAGAGCTGAGCCTTaGCCAGTAAGACATGCTTTG +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFSRAEP*PVRHAL
Trigger: CAAAGCATGTCTTACTGGGCAAGGCTCAGCTCTACT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTACGAAGAAGTGTTTCTaGTCTCCACATACAAGCGGC +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFTKKCF*SPHTSG
Trigger: GCCGCTTGTATGTGGAGAGCAGAAACACTTCTTCGT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCTGAGCATCTGTTTCTaGGAAGCAGCAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFLSICF*EAADGK
Trigger: TTTGCCATCTGCTGCTTCCCAGAAACAGATGCTCAG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCAAACACAGTTCCATTaGTATAGACAGACACGGATT +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLQTQFH*YRQTRI
Trigger: AATCCGTGTCTGTCTATACCAATGGAACTGTGTTTG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCTTGCCACTGCTCAGTaGGAATGGTTTTATTGTCAC +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFLATAQ*EWFYCH
Trigger: GTGACAATAAAACCATTCTCACTGAGCAGTGGCAAG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCTCTCAGTTGAAACAATaGCTTTGTAATTGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLSQLKQ*LCNCPK
Trigger: CTTCGGACAATTACAAAGTCATTGTTTCAACTGAGA...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCGTAACATGTCAGAGATaGTCTTCATGCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFVTCQR*SSCLLP
Trigger: AGGAAGAAGGCATGAAGATCATCTCTGACATGTTAC...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR TCA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTAGAGAGCTGAGAAGATaGACATATTTCAACATCCAG +
Preference number: 4 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPRELRR*TYFNIQ
Trigger: CTGGATGTTGAAATATGTTCATCTTCTCAGCTCTCT...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCAGCAGATGGCAAAGTaGTCAACATTTTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFQQMAK*STFSGC
Trigger: ACAGCCTGAAAATGTTGAGCACTTTGCCATCTGCTG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTCTCAGAATGAAGGTGTaGCTGGAATTCCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGLRMKV*LEFLPN
Trigger: ATTTGGAAGGAATTCCAGGCACACCTTCATTCTGAG...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTGAAAATCAGAAGGCGTaGCTTTCTCAGAGAACCTTA +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGENQKA*LSQRTL
Trigger: TAAGGTTCTCTGAGAAAGCCACGCCTTCTGATTTTC...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTGTGAAGAGTTGTGTTaGAGGGTTGTAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGCEELC*RVVESE
Trigger: TTCACTCTCTACAACCCTCCAACACAACTCTTCACA...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCGACAGTCTACATATCTaGTTTTACTCACCAAAATTC +
Preference number: 4 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLDSLHI*FYSPKF
Trigger: GAATTTTGGTGAGTAAAAGCAGATATGTAGACTGTC...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCGCAGAATCTCCCATATaGTATAAACAAAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFAESPI*YKQKQQ
Trigger: CTGCTGCTTTTGTTTATAGCATATGGGAGATTCTGC...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR GCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTGGCCTTTCTTGTAAATaGTTTCCTGATGGCATGATT +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGGLSCK*FPDGMI
Trigger: AATCATGCCATCAGGAAAGCATTTACAAGAAAGGCC...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCATCTGTAAAGATTCCTaGGAGTTTTCTGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFICKDS*EFSESP
Trigger: TGGGCTTTCAGAAAACTCCCAGGAATCTTTACAGAT...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTATAAATATCCCACATTaGCTCCTTTCCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFINIPH*LLSMEQ
Trigger: CTGCTCCATGGAAAGGAGCCAATGTGGGATATTTAT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTGCTCACTTCAAGAGTaGCATTCAGCTTTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGCSLQE*HSAFFL
Trigger: TAAGAAGAAAGCTGAATGCCACTCTTGAAGTGAGCA...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTAATTCTCGTAATACATaGCCACCCAATTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGNSRNT*PPNLLT
Trigger: TGTGAGCAAATTGGGTGGCCATGTATTACGAGAATT...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CCA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGAAGACTTTCTGTTTTaGAAAACAGTCAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFEDFLF*KTVRKV
Trigger: TACCTTCCTGACTGTTTTCCAAAACAGAAAGTCTTC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp CGTGGTGGCCACCAGCTGTGGACTCAGCAGAAATGCTTCCCAGGTTaGAAAGAGCTGTCCAGCCCAGAGGCGTGGGTGAAGGCTCCGGTG +
Preference number: 5 (lower is better)
Translates to: RGGHQLWTQQKCFPG*KELSSPEAWVKAPV
Trigger: CACCGGAGCCTTCACCCACGCCTCTGGGCTGGACAGCTCTTTCCAACCTGGGAAGCATTTCTGCTGAGTCCACAGCTGGTGGCCACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 90 bp CTCAGTCTCTCCCCGGTCACTCTGAGCTTAGCCTTGGATGGTGTCTaGGCCCAGCGCAGGTGGCGTTCTCGTTGTCGGGTAGCCAAGACC +
Preference number: 5 (lower is better)
Translates to: LSLSPVTLSLALDGV*AQRRWRSRCRVAKT
Trigger: GGTCTTGGCTACCCGACAACGAGAACGCCACCTGCGCTGGGCTCAGACACCATCCAAGGCTAAGCTCAGAGTGACCGGGGAGAGACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp CTCTCTCCTCAGTCTCTCCCCGGTCACTCTGAGCTTAGCCTTGGATaGTGTCTGAGCCCAGCGCAGGTGGCGTTCTCGTTGTCGGGTAGC +
Preference number: 5 (lower is better)
Translates to: LSPQSLPGHSELSLG*CLSPAQVAFSLSGS
Trigger: GCTACCCGACAACGAGAACGCCACCTGCGCTGGGCTCAGACACCATCCAAGGCTAAGCTCAGAGTGACCGGGGAGAGACTGAGGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp GGCAGCTTGGCTGACCAGGGCCTTGGGCCAGTCGATCATGAGAGTTaGCTTTGCTCTACCTGTGTGGAGGAAAGGGCCCAGCAGGTTGTC +
Preference number: 5 (lower is better)
Translates to: GSLADQGLGPVDHES*LCSTCVEERAQQVV
Trigger: GACAACCTGCTGGGCCCTTTCCTCCACACAGGTAGAGCAAAGCCAACTCTCATGATCGACTGGCCCAAGGCCCTGGTCAGCCAAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp AGCCTGCCACAGCTCCTGAAGCAGGAACGTGGTGGCCACCAGCTGTaGACTCAGCAGAAATGCTTCCCAGGTTGGAAAGAGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLPQLLKQERGGHQL*TQQKCFPGWKELSS
Trigger: GCTGGACAGCTCTTTCCAACCTGGGAAGCATTTCTGCTGAGTCCACAGCTGGTGGCCACCACGTTCCTGCTTCAGGAGCTGTGGCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 90 bp GCCCAGGAAATGCTTCTGCCGAGGTGCCATGTGACAGTGTCCCGGTaGAGAGCAGAAACCAGCGCGAGTGGTAATGGGCAGCCAGCAATA +
Preference number: 5 (lower is better)
Translates to: AQEMLLPRCHVTVSR*RAETSASGNGQPAI
Trigger: TATTGCTGGCTGCCCATTACCACTCGCGCTGGTTTCTGCTCTTCACCGGGACACTGTCACATGGCACCTCGGCAGAAGCATTTCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 90 bp TTGGCTGACCAGGGCCTTGGGCCAGTCGATCATGAGAGTTGGCTTTaGTCTACCTGTGTGGAGGAAAGGGCCCAGCAGGTTGTCCCCATA +
Preference number: 5 (lower is better)
Translates to: LADQGLGPVDHESWL*STCVEERAQQVVPI
Trigger: TATGGGGACAACCTGCTGGGCCCTTTCCTCCACACAGGTAGAGCAAAGCCAACTCTCATGATCGACTGGCCCAAGGCCCTGGTCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp CTCTACCTGTGTGGAGGAAAGGGCCCAGCAGGTTGTCCCCATAACTaGCACTCTCCTCAGCACTCAGGCTTGGTCCTGCTTCCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: LYLCGGKGPAGCPHN*HSPQHSGLVLLPGS
Trigger: ACTTCCAGGAAGCAGGACCAAGCCTGAGTGCTGAGGAGAGTGCCAGTTATGGGGACAACCTGCTGGGCCCTTTCCTCCACACAGGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 90 bp AGGGCTGAGGCAGTGGACACAAGTCGATTGGCCATGATTCTCTTCTaGACCCTGATGAGGTGGGGTTCAGAGACCACACTGCCGATCCTG +
Preference number: 5 (lower is better)
Translates to: RAEAVDTSRLAMILF*TLMRWGSETTLPIL
Trigger: CAGGATCGGCAGTGTGGTCTCTGAACCCCACCTCATCAGGGTGCAGAAGAGAATCATGGCCAATCGACTTGTGTCCACTGCCTCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 90 bp AGCAGTAGCATGATGCTGTGTGTGGTCATGTCTCTCAGGGCTGCCTaGATGATGCTCTCTCTCCTCAGTCTCTCCCCGGTCACTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SSSMMLCVVMSLRAA*MMLSLLSLSPVTLS
Trigger: GCTCAGAGTGACCGGGGAGAGACTGAGGAGAGAGAGCATCATGCAGGCAGCCCTGAGAGACATGACCACACACAGCATCATGCTACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp GACACAAGTCGATTGGCCATGATTCTCTTCTGCACCCTGATGAGGTaGGGTTCAGAGACCACACTGCCGATCCTGCTGGTGGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: DTSRLAMILFCTLMR*GSETTLPILLVALT
Trigger: GGTCAAGGCCACCAGCAGGATCGGCAGTGTGGTCTCTGAACCCCACCTCATCAGGGTGCAGAAGAGAATCATGGCCAATCGACTTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp GCAGGCAGAAGGACACGGCAAGCCGCTGTGTGTGTAGGTAGCTTCTaGATGGGGGCTGACTGTACAGTGAGAGCCAGATGTGGAAATCCT +
Preference number: 5 (lower is better)
Translates to: AGRRTRQAAVCVGSF*MGADCTVRARCGNP
Trigger: AGGATTTCCACATCTGGCTCTCACTGTACAGTCAGCCCCCATCCAGAAGCTACCTACACACACAGCGGCTTGCCGTGTCCTTCTGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCTTCACTGGGGGTGGTaGGCAAGGCTCCCGCACGAT +
Preference number: 5 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPLHWGW*ARLPHD
Trigger: ATCGTGCGGGAGCCTTGCCAACCACCCCCAGTGAAG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp CTGGGGAAATGTACCTGGACGAAGCCTAGGTTCTGGATAGAGCTCTaGGGGCTACGATGGAGAAGGGTCTGGAACTCCATCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: LGKCTWTKPRFWIEL*GLRWRRVWNSICPV
Trigger: CACTGGGCAGATGGAGTTCCAGACCCTTCTCCATCGTAGCCCTCAGAGCTCTATCCAGAACCTAGGCTTCGTCCAGGTACATTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 90 bp AGTGGTAATGGGCAGCCAGCAATAGGGCCCCCACCAGCAAGACTCTaGAGAGAGGAAAACAGGTCACTGCTGAGAAGGGTGTCATGGTGC +
Preference number: 5 (lower is better)
Translates to: SGNGQPAIGPPPARL*REENRSLLRRVSWC
Trigger: GCACCATGACACCCTTCTCAGCAGTGACCTGTTTTCCTCTCTTCAGAGTCTTGCTGGTGGGGGCCCTATTGCTGGCTGCCCATTACCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp AACCTTGGCGATGGCGGTGTAGTTCCCACATTCCAGTGTGTAGCTTaGGAGCATGATGGTCTGTCTGCGGGTGTTGACAGCAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: NLGDGGVVPTFQCVA*EHDGLSAGVDSSRE
Trigger: CTCCCTACTGCTGTCAACACCCGCAGACAGACCATCATGCTCCCAAGCTACACACTGGAATGTGGGAACTACACCGCCATCGCCAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp CAGCAGGTTGTCCCCATAACTGGCACTCTCCTCAGCACTCAGGCTTaGTCCTGCTTCCTGGAAGTTTGTACTGGTCCCTGGTTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: QQVVPITGTLLSTQA*SCFLEVCTGPWLSS
Trigger: GGAAGACAACCAGGGACCAGTACAAACTTCCAGGAAGCAGGACCAAGCCTGAGTGCTGAGGAGAGTGCCAGTTATGGGGACAACCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 90 bp CATTTTCAGGCTGTGTCACCAAGGTGGCCCTGGGAGGATGCTGAGTaGGAGGACTGGAACTCTCAGGATGATACCAGGATGCAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: HFQAVSPRWPWEDAE*EDWNSQDDTRMQRG
Trigger: ACCTCTCTGCATCCTGGTATCATCCTGAGAGTTCCAGTCCTCTCACTCAGCATCCTCCCAGGGCCACCTTGGTGACACAGCCTGAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp GTTGTCAGGGTCATAGGACTGGGCCCCTCTGAGGATGATGAAGGTTaGGGTGGCCGTGGAGATGAAGATGTGTGTGCCTTCAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: VVRVIGLGPSEDDEG*GGRGDEDVCAFRDD
Trigger: GTCATCTCTGAAGGCACACACATCTTCATCTCCACGGCCACCTCAACCTTCATCATCCTCAGAGGGGCCCAGTCCTATGACCCTGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 90 bp GGTGAGGGCTGCCTTGAATCTGGTCTCCCACTGGAATCATGGCCCTaGGGTGTCTCTGTCTTCACTCCTCTTAGAGGCCACTGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GEGCLESGLPLESWP*GVSVFTPLRGHCVE
Trigger: TTCAACACAGTGGCCTCTAAGAGGAGTGAAGACAGAGACACCTCAGGGCCATGATTCCAGTGGGAGACCAGATTCAAGGCAGCCCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 90 bp TCTCAGATCATGATGCTTATGGCTGCAGGCCTCCATTGGGAACGGTaGACAGACCACAGCACTGCTGCTGGCTGCTATCCTCCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: SQIMMLMAAGLHWER*TDHSTAAGCYPPSL
Trigger: CAAGCTTGGAGGATAGCAGCCAGCAGCAGTGCTGTGGTCTGTTCACCGTTCCCAATGGAGGCCTGCAGCCATAAGCATCATGATCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 90 bp ATCACGTGGCTGATGAACCAGCATGGGGAAGATCCACTACTGTCGTaGCAGAGGCGGATCTTCTGGAGTGGACCCAGTTGGTTAGGTATG +
Preference number: 5 (lower is better)
Translates to: ITWLMNQHGEDPLLS*QRRIFWSGPSWLGM
Trigger: CATACCTAACCAACTGGGTCCACTCCAGAAGATCCGCCTCTGGCACGACAGTAGTGGATCTTCCCCATGCTGGTTCATCAGCCACGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 90 bp GGTGTCTCTGTCTTCACTCCTCTTAGAGGCCACTGTGTTGAAGCCTaGATATCCCCTCTGGCTTCCTTGCTGCACCTGAAGAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: GVSVFTPLRGHCVEA*ISPLASLLHLKSSD
Trigger: GTCACTGCTCTTCAGGTGCAGCAAGGAAGCCAGAGGGGATATGCAGGCTTCAACACAGTGGCCTCTAAGAGGAGTGAAGACAGAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp CCAGAGCTGGAAGTGCCTGAGCATCTGTTTCTGGGAAGCAGCAGATaGCAAAGTGCTCAACATTTTCAGGCTGTGTCACCAAGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PELEVPEHLFLGSSR*QSAQHFQAVSPRWP
Trigger: GGGCCACCTTGGTGACACAGCCTGAAAATGTTGAGCACTTTGCCATCTGCTGCTTCCCAGAAACAGATGCTCAGGCACTTCCAGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp TGGGGAAGATCCACTACTGTCGTGCCAGAGGCGGATCTTCTGGAGTaGACCCAGTTGGTTAGGTATGCTCAGAATGAAGGTGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: WGRSTTVVPEADLLE*TQLVRYAQNEGVPG
Trigger: TCCAGGCACACCTTCATTCTGAGCATACCTAACCAACTGGGTCCACTCCAGAAGATCCGCCTCTGGCACGACAGTAGTGGATCTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp CAGCATGGGGAAGATCCACTACTGTCGTGCCAGAGGCGGATCTTCTaGAGTGGACCCAGTTGGTTAGGTATGCTCAGAATGAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: QHGEDPLLSCQRRIF*SGPSWLGMLRMKVC
Trigger: GCACACCTTCATTCTGAGCATACCTAACCAACTGGGTCCACTCCAGAAGATCCGCCTCTGGCACGACAGTAGTGGATCTTCCCCATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp GAGAAGAACCAGGCTTGTCCTGAGCATAGCTCCTTCACCATCACGTaGCTGATGAACCAGCATGGGGAAGATCCACTACTGTCGTGCCAG +
Preference number: 5 (lower is better)
Translates to: EKNQACPEHSSFTIT*LMNQHGEDPLLSCQ
Trigger: CTGGCACGACAGTAGTGGATCTTCCCCATGCTGGTTCATCAGCCACGTGATGGTGAAGGAGCTATGCTCAGGACAAGCCTGGTTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp CTGATGTGGGATGTGGTGAGGGCTGCCTTGAATCTGGTCTCCCACTaGAATCATGGCCCTGAGGTGTCTCTGTCTTCACTCCTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: LMWDVVRAALNLVSH*NHGPEVSLSSLLLE
Trigger: CTCTAAGAGGAGTGAAGACAGAGACACCTCAGGGCCATGATTCCAGTGGGAGACCAGATTCAAGGCAGCCCTCACCACATCCCACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTTGGCTGACCAGGGCCTaGGGCCAGTCGATCATGAGA +
Preference number: 5 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSWLTRA*GQSIMR
Trigger: TCTCATGATCGACTGGCCCAAGGCCCTGGTCAGCCA...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp GAGGAACAAGAGGATTCCTTGGAGGCATCGCGCCCTCTGATGCCATaGCACCATCAGGCCGATGTCCACAAGCCTCTGATAAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: EEQEDSLEASRPLMP*HHQADVHKPLIKSF
Trigger: AAAGGACTTTATCAGAGGCTTGTGGACATCGGCCTGATGGTGTCATGGCATCAGAGGGCGCGATGCCTCCAAGGAATCCTCTTGTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp GGGGAGACATTCTGTGCCCAGGATCACGCTTGTGAAGAGTTGTGTTaGAGGGTTGTAGAGAGTGAAGTGCACAGACATGGCCCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: GETFCAQDHACEELC*RVVESEVHRHGPCA
Trigger: AGCACAAGGGCCATGTCTGTGCACTTCACTCTCTACAACCCTCCAACACAACTCTTCACAAGCGTGATCCTGGGCACAGAATGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCTGGCCGCTGGCCACTaGGGTCTGAGAAATAAAGGA +
Preference number: 5 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPLAAGH*GLRNKG
Trigger: TCCTTTATTTCTCAGACCCAAGTGGCCAGCGGCCAG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTGTGGTGAGGGCTGCCTaGAATCTGGTCTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPVVRAA*NLVSHW
Trigger: CCAGTGGGAGACCAGATTCAAGGCAGCCCTCACCAC...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGAACAAGAGGATTCCTaGGAGGCATCGCGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSEQEDS*EASRPL
Trigger: CAGAGGGCGCGATGCCTCCAAGGAATCCTCTTGTTC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 90 bp CTGGTCGGTGATGTTCACAGCAAGAGTAGTGAGGTGACCAGAGGCTaGATAGTAGGCTATTGCTACTCCAACCATAGAGAGCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LVGDVHSKSSEVTRG*IVGYCYSNHRELQP
Trigger: TGGCTGGAGCTCTCTATGGTTGGAGTAGCAATAGCCTACTATGCAGCCTCTGGTCACCTCACTACTCTTGCTGTGAACATCACCGACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp GTGATGGTAGCTGCAGTTGACTTTTTCAGGAGACGATCCTGGCTGTaGATAGGGACCTTCAGATCGCCACTCTGTCTTGTCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: VMVAAVDFFRRRSWL*IGTFRSPLCLVPEH
Trigger: GTGTTCTGGGACAAGACAGAGTGGCGATCTGAAGGTCCCTATCCACAGCCAGGATCGTCTCCTGAAAAAGTCAACTGCAGCTACCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp TGCAAGGTGATGGTAGCTGCAGTTGACTTTTTCAGGAGACGATCCTaGCTGTGGATAGGGACCTTCAGATCGCCACTCTGTCTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: CKVMVAAVDFFRRRS*LWIGTFRSPLCLVP
Trigger: TGGGACAAGACAGAGTGGCGATCTGAAGGTCCCTATCCACAGCCAGGATCGTCTCCTGAAAAAGTCAACTGCAGCTACCATCACCTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp TTTCCGTTTCCAAGCAAAGACAAGTGCTGCCAAGCAGATCATGAGTaGCTGGGTGATGAATGCGCAGCAGACCAGAGAGAGAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FPFPSKDKCCQADHE*LGDECAADQREKQQ
Trigger: CTGCTGCTTCTCTCTCTGGTCTGCTGCGCATTCATCACCCAGCCACTCATGATCTGCTTGGCAGCACTTGTCTTTGCTTGGAAACGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTGAAATGCTTCCCAGGTaGGAAAGAGCTGTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPEMLPR*ERAVQP
Trigger: GGGCTGGACAGCTCTTTCCAACCTGGGAAGCATTTC...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCCTGCTTCCTGGAAGTTaGTACTGGTCCCTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPLLPGS*YWSLVV
Trigger: GACAACCAGGGACCAGTACAAACTTCCAGGAAGCAG...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCTCAGCACTCAGGCTaGGTCCTGCTTCCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPPQHSG*VLLPGS
Trigger: ACTTCCAGGAAGCAGGACCAAGCCTGAGTGCTGAGG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTCAGAGGTGGATCACGTaGAGTACCAGGAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSQRWIT*STRNSS
Trigger: GCTGCTGTTCCTGGTACTCAACGTGATCCACCTCTG...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp AGGGCCCCAGTTCCTCGGCTCTATGAAAGTCATGGACAACAGCCTTaGGCTCATAGACTCCTTCTTTCCTGTACTGATGGTAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RAPVPRLYESHGQQP*AHRLLLSCTDGSQS
Trigger: TGACTGGCTACCATCAGTACAGGAAAGAAGGAGTCTATGAGCTCAAGGCTGTTGTCCATGACTTTCATAGAGCCGAGGAACTGGGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 90 bp TTCTTCACTGGGGGTGGTTGGCAAGGCTCCCGCACGATGAAAAGCTaGTTTCTTAGGGTAGTGGAGCTGACATTATTGAAGGCAAGGACT +
Preference number: 5 (lower is better)
Translates to: FFTGGGWQGSRTMKS*FLRVVELTLLKART
Trigger: AGTCCTTGCCTTCAATAATGTCAGCTCCACTACCCTAAGAAAGCAGCTTTTCATCGTGCGGGAGCCTTGCCAACCACCCCCAGTGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp AGCCATTTTGCTGGGAAGGAAATGGCAGGAGCTTGCGTGTCCACTTaGTATGAAGTAGAGTTATCAAAGCAGGGCCACCTTGGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SHFAGKEMAGACVST*YEVELSKQGHLGEL
Trigger: CAGCTCACCAAGGTGGCCCTGCTTTGATAACTCTACTTCATACCAAGTGGACACGCAAGCTCCTGCCATTTCCTTCCCAGCAAAATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCACATGGCCACCCAATTaGCTCACAGCCAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFTWPPN*LTASQH
Trigger: GTGCTGGCTGGCTGTGAGCAAATTGGGTGGCCATGT...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCTCCCCTCTGGCTTCCTaGCTGCACCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFSPLAS*LHLKSS
Trigger: ACTGCTCTTCAGGTGCAGCAAGGAAGCCAGAGGGGA...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGGCTGCAGGCCTCCATaGGGAACGGTGAACAGACCA +
Preference number: 5 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFGCRPP*GTVNRP
Trigger: TGGTCTGTTCACCGTTCCCAATGGAGGCCTGCAGCC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp AAAGTTGAGCCTGCACTCAAAGGACACATTGGCATTTACCAGGGCTaGGGCAGTGGACACAAGTCGATTGGCCATGATTCTCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KVEPALKGHIGIYQG*GSGHKSIGHDSLLH
Trigger: GTGCAGAAGAGAATCATGGCCAATCGACTTGTGTCCACTGCCTCAGCCCTGGTAAATGCCAATGTGTCCTTTGAGTGCAGGCTCAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp TTCTTCTTAGGACAGAGACAGGTGCAAGGTGATGGTAGCTGCAGTTaGCTTTTTCAGGAGACGATCCTGGCTGTGGATAGGGACCTTCAG +
Preference number: 5 (lower is better)
Translates to: FFLGQRQVQGDGSCS*LFQETILAVDRDLQ
Trigger: CTGAAGGTCCCTATCCACAGCCAGGATCGTCTCCTGAAAAAGTCAACTGCAGCTACCATCACCTTGCACCTGTCTCTGTCCTAAGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 90 bp CAGCATTCACTGAGCCATTTTGCTGGGAAGGAAATGGCAGGAGCTTaGGTGTCCACTTGGTATGAAGTAGAGTTATCAAAGCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: QHSLSHFAGKEMAGA*VSTWYEVELSKQGH
Trigger: GTGGCCCTGCTTTGATAACTCTACTTCATACCAAGTGGACACGCAAGCTCCTGCCATTTCCTTCCCAGCAAAATGGCTCAGTGAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 90 bp CACAGCAAGAGTAGTGAGGTGACCAGAGGCTGCATAGTAGGCTATTaGTACTCCAACCATAGAGAGCTCCAGCCAGTGTCTTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: HSKSSEVTRGCIVGY*YSNHRELQPVSWFS
Trigger: AGAAAACCAAGACACTGGCTGGAGCTCTCTATGGTTGGAGTAGCAATAGCCTACTATGCAGCCTCTGGTCACCTCACTACTCTTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCACTCAAAGGACACATaGGCATTTACCAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLHSKDT*AFTRAE
Trigger: CTCAGCCCTGGTAAATGCCAATGTGTCCTTTGAGTG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp GTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCGAGATGTCTCTAAAGTaGACCCATGAGATGTGGACG +
Preference number: 5 (lower is better)
Translates to: VVRCDVQLFPIPGIRFPPEMSLK*THEMWT
Trigger: CGTCCACATCTCATGGGTCAACTTTAGAGACATCTC...GGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTCTTCTCTGTTGCATaGACTAGGAAGAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPLFSVA*TRKRSQ
Trigger: CTGGGACCTCTTCCTAGTCAATGCAACAGAGAAGAG...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCAGTCTCTTCCAAAGTaGTTTCCAGCCCCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPQSLPK*FPAPEG
Trigger: CCCTTCTGGGGCTGGAAACAACTTTGGAAGAGACTG...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp TGTCATCTCCAAAGTTCCAAAGGTAGGCTACATCAGTGCCAAAGTTaGGCCTGCACTCAAAGGACACATTGGCATTTACCAGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: CHLQSSKGRLHQCQS*ACTQRTHWHLPGLR
Trigger: CCTCAGCCCTGGTAAATGCCAATGTGTCCTTTGAGTGCAGGCTCAACTTTGGCACTGATGTAGCCTACCTTTGGAACTTTGGAGATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp CTCTGCTGTGGGAGGGAGTCAGCAAAGGAAAGAGCTTCGCTATCATaGATAGAGCTGGAATTCATGAAGACAGACACATTCCCATGGCTA +
Preference number: 5 (lower is better)
Translates to: LCCGRESAKERASLS*IELEFMKTDTFPWL
Trigger: TAGCCATGGGAATGTGTCTGTCTTCATGAATTCCAGCTCTATCCATGATAGCGAAGCTCTTTCCTTTGCTGACTCCCTCCCACAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp GACGCTCAGCCTTCTTCTAATGCTTCTGGAAGTTGTCATCACTGGTaGGTTCTCTCCGAAATACCAAGCGAACTCCAGGGGTATAGTTTC +
Preference number: 5 (lower is better)
Translates to: DAQPSSNASGSCHHW*VLSEIPSELQGYSF
Trigger: GAAACTATACCCCTGGAGTTCGCTTGGTATTTCGGAGAGAACCCACCAGTGATGACAACTTCCAGAAGCATTAGAAGAAGGCTGAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTACATCAGTGCCAAAGTaGAGCCTGCACTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPTSVPK*SLHSKD
Trigger: GTCCTTTGAGTGCAGGCTCAACTTTGGCACTGATGT...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp TTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCCTGGAGAACTGGCCTaGAGCAAGGAACATCTTGGT +
Preference number: 5 (lower is better)
Translates to: LLWLDVMSSSFLFQASGFPGELA*SKEHLG
Trigger: ACCAAGATGTTCCTTGCTCAAGGCCAGTTCTCCAGG...GAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCGCTTTGTGTTGCCTCTaGAGTAGTACTGTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLALCCL*SSTVQG
Trigger: TCCTTGCACAGTACTACTCAAGAGGCAACACAAAGC...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTGTCCCAGAACACACATaGGATCCACTGGAAATGCAC +
Preference number: 5 (lower is better)
Translates to: TVVRCDVQLFPIPGIRFPVPEHT*DPLEMH
Trigger: GTGCATTTCCAGTGGATCCAATGTGTGTTCTGGGAC...AGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTAGAGCAGACAGACCCTaGACTTCTGGGACCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGRADRP*TSGTQV
Trigger: AACTTGGGTCCCAGAAGTCAAGGGTCTGTCTGCTCT...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp CACTTCTTCATTCCAGTTCACAGAGATGTCTCTAAAGTTGACCCATaGGATGTGGACGAATCTGAAGGCCAAGTCAGGACGGGTAGACAG +
Preference number: 5 (lower is better)
Translates to: HFFIPVHRDVSKVDP*DVDESEGQVRTGRQ
Trigger: CTGTCTACCCGTCCTGACTTGGCCTTCAGATTCGTCCACATCTCATGGGTCAACTTTAGAGACATCTCTGTGAACTGGAATGAAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 90 bp CTACGATGGAGAAGGGTCTGGAACTCCATCTGCCCAGTGCTTACGTaGATTAGTAACATGTCAGAGATGATCTTCATGCCTTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LRWRRVWNSICPVLT*ISNMSEMIFMPSSC
Trigger: GCAGGAAGAAGGCATGAAGATCATCTCTGACATGTTACTAATTCACGTAAGCACTGGGCAGATGGAGTTCCAGACCCTTCTCCATCGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 90 bp TATGAAGAAATGGATGAAAAACAATGCACCACGACTGTGCCTCTCTaGTGTGGGAGGGAGTCAGCAAAGGAAAGAGCTTCGCTATCATGG +
Preference number: 5 (lower is better)
Translates to: YEEMDEKQCTTTVPL*CGRESAKERASLSW
Trigger: CCATGATAGCGAAGCTCTTTCCTTTGCTGACTCCCTCCCACAGCAGAGAGGCACAGTCGTGGTGCATTGTTTTTCATCCATTTCTTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 90 bp TTCTGGAGTGGACCCAGTTGGTTAGGTATGCTCAGAATGAAGGTGTaGCTGGAATTCCTTCCAAATAAGGGCTTCTCTGGACAACAGAGT +
Preference number: 5 (lower is better)
Translates to: FWSGPSWLGMLRMKV*LEFLPNKGFSGQQS
Trigger: ACTCTGTTGTCCAGAGAAGCCCTTATTTGGAAGGAATTCCAGGCACACCTTCATTCTGAGCATACCTAACCAACTGGGTCCACTCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp TCATTCCAGTTCACAGAGATGTCTCTAAAGTTGACCCATGAGATGTaGACGAATCTGAAGGCCAAGTCAGGACGGGTAGACAGGAACATC +
Preference number: 5 (lower is better)
Translates to: SFQFTEMSLKLTHEM*TNLKAKSGRVDRNI
Trigger: GATGTTCCTGTCTACCCGTCCTGACTTGGCCTTCAGATTCGTCCACATCTCATGGGTCAACTTTAGAGACATCTCTGTGAACTGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 90 bp ACTGGAGGACTGTCACCTGCCCTTGACTCTAGTGCTCTCTTCCATTaGTTTTCTAGGATAGAAAGTTCTAGGCTGTCAGACAAACCATCG +
Preference number: 5 (lower is better)
Translates to: TGGLSPALDSSALFH*FSRIESSRLSDKPS
Trigger: CGATGGTTTGTCTGACAGCCTAGAACTTTCTATCCTAGAAAACCAATGGAAGAGAGCACTAGAGTCAAGGGCAGGTGACAGTCCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp GTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCTGTGGAGCTGACATTATaGAAGGCAAGGACTTCAACT +
Preference number: 5 (lower is better)
Translates to: VRCDVQLFPIPGIRFPPSVELTL*KARTST
Trigger: AGTTGAAGTCCTTGCCTTCAATAATGTCAGCTCCAC...AGAGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCACAGGTGTCTCCAGTaGTCCTCTGAGGATAGGTCT +
Preference number: 5 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFHRCLQ*SSEDRS
Trigger: AGACCTATCCTCAGAGGACAACTGGAGACACCTGTG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp TGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCCTCATGGGCTTCATGTCTaGTTTTTCCTAGGCTATGCA +
Preference number: 5 (lower is better)
Translates to: WLDVMSSSFLFQASGFLPHGLHV*FFLGYA
Trigger: TGCATAGCCTAGGAAAAACAAGACATGAAGCCCATG...AGGGAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 90 bp AAATACCGGGGAGCAAGTTGTGTGGGTGACTCTGAAACTCAGAAATaGTGCTCACTTCAAGAGTGGCATTCAGCTTTCTTCTTAGGACAG +
Preference number: 5 (lower is better)
Translates to: KYRGASCVGDSETQK*CSLQEWHSAFFLGQ
Trigger: CTGTCCTAAGAAGAAAGCTGAATGCCACTCTTGAAGTGAGCAGCATTTCTGAGTTTCAGAGTCACCCACACAACTTGCTCCCCGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCACGCTTGTGAAGAGTaGTGTTGGAGGGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFHACEE*CWRVVE
Trigger: CTCTACAACCCTCCAACACAACTCTTCACAAGCGTG...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp ATCTGTAAAGATTCCTGGGAGTTTTCTGAAAGCCCAGTAAACCGGTaGACATTCACCTCATCCCGAAGCAACACAAACATGGCTGGATTT +
Preference number: 5 (lower is better)
Translates to: ICKDSWEFSESPVNR*TFTSSRSNTNMAGF
Trigger: AAATCCAGCCATGTTTGTGTTGCTTCGGGATGAGGTGAATGTCCACCGGTTTACTGGGCTTTCAGAAAACTCCCAGGAATCTTTACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGGTGTAGGAAAGCCCTaGGGAAATGTTACAGAGGAT +
Preference number: 5 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFGVGKP*GNVTED
Trigger: ATCCTCTGTAACATTTCCCAAGGGCTTTCCTACACC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp CTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTCCTCCAGCAAGATATTTGTTaGGAGGTTTCCTGTCATAGT +
Preference number: 5 (lower is better)
Translates to: LWLDVMSSSFLFQASGFLQQDIC*EVSCHS
Trigger: ACTATGACAGGAAACCTCCAAACAAATATCTTGCTG...GAGGAAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTGCCCCAGCAAGATATTaGTTTGGAGGTTTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFAPARY*FGGFLS
Trigger: TGACAGGAAACCTCCAAACAAATATCTTGCTGGGGC...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp GAAAACAGGTCACTGCTGAGAAGGGTGTCATGGTGCTTAGAGAGCTaGGAAGATGAACATATTTCAACATCCAGAGGAACAAGAGGATTC +
Preference number: 5 (lower is better)
Translates to: ENRSLLRRVSWCLES*EDEHISTSRGTRGF
Trigger: GAATCCTCTTGTTCCTCTGGATGTTGAAATATGTTCATCTTCTCAGCTCTCTAAGCACCATGACACCCTTCTCAGCAGTGACCTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTGTAAGACATATGTCTaGCCACTGCTCAGTGAGAAT +
Preference number: 5 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGCKTYV*PLLSEN
Trigger: ATTCTCACTGAGCAGTGGCAAGACATATGTCTTACA...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTGAGTTATATAGTTCCTaGTCACAGCAGTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGELYSS*SQQSFP
Trigger: TGGAAATGACTGCTGTGACAAGGAACTATATAACTC...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTAACATCTTGGTGTATTaGAAGATGCACATGGCACTC +
Preference number: 5 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFNILVY*KMHMAL
Trigger: GAGTGCCATGTGCATCTTCAAATACACCAAGATGTT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 90 bp GTTTCCTGTCATAGTCAGCATCTAATAGCGATAAATATCCCACATTaGCTCCTTTCCATGGAGCAGCAGGTACATACATTTGTACAGTCT +
Preference number: 5 (lower is better)
Translates to: VSCHSQHLIAINIPH*LLSMEQQVHTFVQS
Trigger: AGACTGTACAAATGTATGTACCTGCTGCTCCATGGAAAGGAGCCAATGTGGGATATTTATCGCTATTAGATGCTGACTATGACAGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS-3UTR CAA 90 bp ATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTTTAGAAGACTTTCTGTTTaGGAAAACAGTCAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: ITVVRCDVQLFPIPGIRFRRLSV*ENSQEG
Trigger: ACCTTCCTGACTGTTTTCCAAAACAGAAAGTCTTCT...AAACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS-3UTR CAA 90 bp TCATTACTGTGGTTAGATGTGATGTCCAGCTCTTTCCTATTCCAGGCATCCGGTGTTCATCCAAGAGACTaGAAAATTCATCCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: SLLWLDVMSSSFLFQASGVHPRD*KIHPGN
Trigger: ATTACCTGGATGAATTTTCAAGTCTCTTGGATGAAC...ACCGGATGCCTGGAATAGGAAAGAGCTGGACATCACATCTAACCACAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 90 bp GTCAGACAAACCATCGATCTTCATCAGAAGTTCATCCAAGAGACTTaGAAATTCATCCAGGTAATAAATATGGTCTGTAGCCACTTCAGT +
Preference number: 5 (lower is better)
Translates to: VRQTIDLHQKFIQET*KFIQVINMVCSHFS
Trigger: ACTGAAGTGGCTACAGACCATATTTATTACCTGGATGAATTTTCAAGTCTCTTGGATGAACTTCTGATGAAGATCGATGGTTTGTCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp GGGTTCCAGAGTGATAGCTGTGGGCCCCACATCCAGGGGGCGCTGTaGATGGTCTCGCACAGTGACCAGGGCAGTGAGGCACGAGTAGAC +
Preference number: 6 (lower is better)
Translates to: GFQSDSCGPHIQGAL*MVSHSDQGSEARVD
Trigger: GTCTACTCGTGCCTCACTGCCCTGGTCACTGTGCGAGACCATCAACAGCGCCCCCTGGATGTGGGGCCCACAGCTATCACTCTGGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GGCCACCTTGGTGAGCTGGCCGCTGTGCAAGTCCAGTaGTACCTGAGAGCAGCCCCTGGGTTGTCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: GHLGELAAVQVQ*YLRAAPGLSGS
Trigger: TGACCCTGACAACCCAGGGGCTGCTCTCAGGTATCACTGGACTTGCACAGCGGCCAGCTCACCAAGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp AGTGATAGCTGTGGGCCCCACATCCAGGGGGCGCTGTaGATGGTCTCGCACAGTGACCAGGGCAGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: SDSCGPHIQGAL*MVSHSDQGSEA
Trigger: TGCCTCACTGCCCTGGTCACTGTGCGAGACCATCAACAGCGCCCCCTGGATGTGGGGCCCACAGCTATCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp ACGTGGTGGCCACCAGCTGTGGACTCAGCAGAAATGCTTCCCAGGTaGGAAAGAGCTGTCCAGCCCAGAGGCGTGGGTGAAGGCTCCGGT +
Preference number: 6 (lower is better)
Translates to: TWWPPAVDSAEMLPR*ERAVQPRGVGEGSG
Trigger: ACCGGAGCCTTCACCCACGCCTCTGGGCTGGACAGCTCTTTCCAACCTGGGAAGCATTTCTGCTGAGTCCACAGCTGGTGGCCACCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GTTCAGAGACCACACTGCCGATCCTGCTGGTGGCCTTaGCCTTCACACGGTACCACTGAGGGACGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: VQRPHCRSCWWP*PSHGTTEGRSA
Trigger: GGCTGAGCGTCCCTCAGTGGTACCGTGTGAAGGTCAAGGCCACCAGCAGGATCGGCAGTGTGGTCTCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 72 bp TCCCCGGTCACTCTGAGCTTAGCCTTGGATGGTGTCTaGGCCCAGCGCAGGTGGCGTTCTCGTTGTCGGGTA +
Preference number: 6 (lower is better)
Translates to: SPVTLSLALDGV*AQRRWRSRCRV
Trigger: TACCCGACAACGAGAACGCCACCTGCGCTGGGCTCAGACACCATCCAAGGCTAAGCTCAGAGTGACCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CGCTGTGCAAGTCCAGTGATACCTGAGAGCAGCCCCTaGGTTGTCAGGGTCATAGGACTGGGCCCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: RCASPVIPESSP*VVRVIGLGPSE
Trigger: CTCAGAGGGGCCCAGTCCTATGACCCTGACAACCCAGGGGCTGCTCTCAGGTATCACTGGACTTGCACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp CTTAGCCTTGGATGGTGTCTGAGCCCAGCGCAGGTGGCGTTCTCGTaGTCGGGTAGCCAAGACCCTTTCAGCCTCCTCAGCAGTGTCAGG +
Preference number: 6 (lower is better)
Translates to: LSLGWCLSPAQVAFS*SGSQDPFSLLSSVR
Trigger: CCTGACACTGCTGAGGAGGCTGAAAGGGTCTTGGCTACCCGACAACGAGAACGCCACCTGCGCTGGGCTCAGACACCATCCAAGGCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GCTGACCAGGGCCTTGGGCCAGTCGATCATGAGAGTTaGCTTTGCTCTACCTGTGTGGAGGAAAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: ADQGLGPVDHES*LCSTCVEERAQ
Trigger: CTGGGCCCTTTCCTCCACACAGGTAGAGCAAAGCCAACTCTCATGATCGACTGGCCCAAGGCCCTGGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp TGCTGTGTGTGGTCATGTCTCTCAGGGCTGCCTGCATaGTGCTCTCTCTCCTCAGTCTCTCCCCGGTCACTC +
Preference number: 6 (lower is better)
Translates to: CCVWSCLSGLPA*CSLSSVSPRSL
Trigger: GAGTGACCGGGGAGAGACTGAGGAGAGAGAGCATCATGCAGGCAGCCCTGAGAGACATGACCACACACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GGGCAGCCAGCAATAGGGCCCCCACCAGCAAGACTCTaGAGAGAGGAAAACAGGTCACTGCTGAGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: GQPAIGPPPARL*REENRSLLRRV
Trigger: CACCCTTCTCAGCAGTGACCTGTTTTCCTCTCTTCAGAGTCTTGCTGGTGGGGGCCCTATTGCTGGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp CAGGGCCTTGGGCCAGTCGATCATGAGAGTTGGCTTTaGTCTACCTGTGTGGAGGAAAGGGCCCAGCAGGTT +
Preference number: 6 (lower is better)
Translates to: QGLGPVDHESWL*STCVEERAQQV
Trigger: AACCTGCTGGGCCCTTTCCTCCACACAGGTAGAGCAAAGCCAACTCTCATGATCGACTGGCCCAAGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp TGTGGAGGAAAGGGCCCAGCAGGTTGTCCCCATAACTaGCACTCTCCTCAGCACTCAGGCTTGGTCCTGCTT +
Preference number: 6 (lower is better)
Translates to: CGGKGPAGCPHN*HSPQHSGLVLL
Trigger: AAGCAGGACCAAGCCTGAGTGCTGAGGAGAGTGCCAGTTATGGGGACAACCTGCTGGGCCCTTTCCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp CCACCAGCTGTGGACTCAGCAGAAATGCTTCCCAGGTaGGAAAGAGCTGTCCAGCCCAGAGGCGTGGGTGAA +
Preference number: 6 (lower is better)
Translates to: PPAVDSAEMLPR*ERAVQPRGVGE
Trigger: TTCACCCACGCCTCTGGGCTGGACAGCTCTTTCCAACCTGGGAAGCATTTCTGCTGAGTCCACAGCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp CATTCCAGGGGAGAAGGTCTGATGTGGGATGTGGTGAGGGCTGCCTaGAATCTGGTCTCCCACTGGAATCATGGCCCTGAGGTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: HSRGEGLMWDVVRAA*NLVSHWNHGPEVSL
Trigger: CAGAGACACCTCAGGGCCATGATTCCAGTGGGAGACCAGATTCAAGGCAGCCCTCACCACATCCCACATCAGACCTTCTCCCCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GCTGTGTCACCAAGGTGGCCCTGGGAGGATGCTGAGTaGGAGGACTGGAACTCTCAGGATGATACCAGGATG +
Preference number: 6 (lower is better)
Translates to: AVSPRWPWEDAE*EDWNSQDDTRM
Trigger: CATCCTGGTATCATCCTGAGAGTTCCAGTCCTCTCACTCAGCATCCTCCCAGGGCCACCTTGGTGACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 72 bp AGGAACAAGAGGATTCCTTGGAGGCATCGCGCCCTCTaGTGCCATGACACCATCAGGCCGATGTCCACAAGC +
Preference number: 6 (lower is better)
Translates to: RNKRIPWRHRAL*CHDTIRPMSTS
Trigger: GCTTGTGGACATCGGCCTGATGGTGTCATGGCATCAGAGGGCGCGATGCCTCCAAGGAATCCTCTTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp CTGATGAACCAGCATGGGGAAGATCCACTACTGTCGTaGCAGAGGCGGATCTTCTGGAGTGGACCCAGTTGG +
Preference number: 6 (lower is better)
Translates to: LMNQHGEDPLLS*QRRIFWSGPSW
Trigger: CCAACTGGGTCCACTCCAGAAGATCCGCCTCTGGCACGACAGTAGTGGATCTTCCCCATGCTGGTTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp AGGCCTCCATTGGGAACGGTGAACAGACCACAGCACTaGTGCTGGCTGCTATCCTCCAAGCTTGGTCATTCC +
Preference number: 6 (lower is better)
Translates to: RPPLGTVNRPQH*CWLLSSKLGHS
Trigger: GGAATGACCAAGCTTGGAGGATAGCAGCCAGCAGCAGTGCTGTGGTCTGTTCACCGTTCCCAATGGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CGATTGGCCATGATTCTCTTCTGCACCCTGATGAGGTaGGGTTCAGAGACCACACTGCCGATCCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RLAMILFCTLMR*GSETTLPILLV
Trigger: CACCAGCAGGATCGGCAGTGTGGTCTCTGAACCCCACCTCATCAGGGTGCAGAAGAGAATCATGGCCAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 72 bp CAGCTCCTGAAGCAGGAACGTGGTGGCCACCAGCTGTaGACTCAGCAGAAATGCTTCCCAGGTTGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: QLLKQERGGHQL*TQQKCFPGWKE
Trigger: CTCTTTCCAACCTGGGAAGCATTTCTGCTGAGTCCACAGCTGGTGGCCACCACGTTCCTGCTTCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp AGGACACGGCAAGCCGCTGTGTGTGTAGGTAGCTTCTaGATGGGGGCTGACTGTACAGTGAGAGCCAGATGT +
Preference number: 6 (lower is better)
Translates to: RTRQAAVCVGSF*MGADCTVRARC
Trigger: ACATCTGGCTCTCACTGTACAGTCAGCCCCCATCCAGAAGCTACCTACACACACAGCGGCTTGCCGTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CCATTGGGAACGGTGAACAGACCACAGCACTGCTGCTaGCTGCTATCCTCCAAGCTTGGTCATTCCAGGGGA +
Preference number: 6 (lower is better)
Translates to: PLGTVNRPQHCC*LLSSKLGHSRG
Trigger: TCCCCTGGAATGACCAAGCTTGGAGGATAGCAGCCAGCAGCAGTGCTGTGGTCTGTTCACCGTTCCCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp GGTAGCACAGTCACCGCCACAGTGCATGGCTGCACCTaGGAGCCGTGGCCATCTGTGATCTCAGTTGAAACA +
Preference number: 6 (lower is better)
Translates to: GSTVTATVHGCT*EPWPSVISVET
Trigger: TGTTTCAACTGAGATCACAGATGGCCACGGCTCCAAGGTGCAGCCATGCACTGTGGCGGTGACTGTGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp GGAGAAGGTCTGATGTGGGATGTGGTGAGGGCTGCCTaGAATCTGGTCTCCCACTGGAATCATGGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: GEGLMWDVVRAA*NLVSHWNHGPE
Trigger: CTCAGGGCCATGATTCCAGTGGGAGACCAGATTCAAGGCAGCCCTCACCACATCCCACATCAGACCTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp CACGCCACAGGTCTCAGGGCCGCCAGGGGACACATTTaGGTTCTCAAGGTCAAGGTCATTGCTGTGCATAGG +
Preference number: 6 (lower is better)
Translates to: HATGLRAARGHI*VLKVKVIAVHR
Trigger: CCTATGCACAGCAATGACCTTGACCTTGAGAACCAAAATGTGTCCCCTGGCGGCCCTGAGACCTGTGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp CCAGCAGGTTGTCCCCATAACTGGCACTCTCCTCAGCACTCAGGCTaGGTCCTGCTTCCTGGAAGTTTGTACTGGTCCCTGGTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: PAGCPHNWHSPQHSG*VLLPGSLYWSLVVF
Trigger: GAAGACAACCAGGGACCAGTACAAACTTCCAGGAAGCAGGACCAAGCCTGAGTGCTGAGGAGAGTGCCAGTTATGGGGACAACCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp ATGATGCTTATGGCTGCAGGCCTCCATTGGGAACGGTaGACAGACCACAGCACTGCTGCTGGCTGCTATCCT +
Preference number: 6 (lower is better)
Translates to: MMLMAAGLHWER*TDHSTAAGCYP
Trigger: AGGATAGCAGCCAGCAGCAGTGCTGTGGTCTGTTCACCGTTCCCAATGGAGGCCTGCAGCCATAAGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp AGAGCTCCAGCCAGTGTCTTGGTTTTCTCCAGTAGCTaGGGATGCCCTTGGTTGTCATCCCCCAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: RAPASVLVFSSS*GCPWLSSPRAG
Trigger: TCCAGCTCTGGGGGATGACAACCAAGGGCATCCTCAGCTACTGGAGAAAACCAAGACACTGGCTGGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GATGGCGGTGTAGTTCCCACATTCCAGTGTGTAGCTTaGGAGCATGATGGTCTGTCTGCGGGTGTTGACAGC +
Preference number: 6 (lower is better)
Translates to: DGGVVPTFQCVA*EHDGLSAGVDS
Trigger: GCTGTCAACACCCGCAGACAGACCATCATGCTCCCAAGCTACACACTGGAATGTGGGAACTACACCGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 72 bp GCACTCTCCTCAGCACTCAGGCTTGGTCCTGCTTCCTaGAAGTTTGTACTGGTCCCTGGTTGTCTTCCTAGG +
Preference number: 6 (lower is better)
Translates to: ALSSALRLGPAS*KFVLVPGCLPR
Trigger: CCTAGGAAGACAACCAGGGACCAGTACAAACTTCCAGGAAGCAGGACCAAGCCTGAGTGCTGAGGAGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GATGTGGTGAGGGCTGCCTTGAATCTGGTCTCCCACTaGAATCATGGCCCTGAGGTGTCTCTGTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: DVVRAALNLVSH*NHGPEVSLSSL
Trigger: GAGTGAAGACAGAGACACCTCAGGGCCATGATTCCAGTGGGAGACCAGATTCAAGGCAGCCCTCACCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp ACCACAGCACTGCTGCTGGCTGCTATCCTCCAAGCTTaGTCATTCCAGGGGAGAAGGTCTGATGTGGGATGT +
Preference number: 6 (lower is better)
Translates to: TTALLLAAILQA*SFQGRRSDVGC
Trigger: ACATCCCACATCAGACCTTCTCCCCTGGAATGACCAAGCTTGGAGGATAGCAGCCAGCAGCAGTGCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp ACGCCACAGGTCTCAGGGCCGCCAGGGGACACATTTTaGTTCTCAAGGTCAAGGTCATTGCTGTGCATAGGA +
Preference number: 6 (lower is better)
Translates to: TPQVSGPPGDTF*FSRSRSLLCIG
Trigger: TCCTATGCACAGCAATGACCTTGACCTTGAGAACCAAAATGTGTCCCCTGGCGGCCCTGAGACCTGTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp GTCGTGCCAGAGGCGGATCTTCTGGAGTGGACCCAGTaGGTTAGGTATGCTCAGAATGAAGGTGTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: VVPEADLLEWTQ*VRYAQNEGVPG
Trigger: TCCAGGCACACCTTCATTCTGAGCATACCTAACCAACTGGGTCCACTCCAGAAGATCCGCCTCTGGCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp CTTAGAGGCCACTGTGTTGAAGCCTGCATATCCCCTCTGGCTTCCTaGCTGCACCTGAAGAGCAGTGACAGAAGCTGTGCAACTGGACAG +
Preference number: 6 (lower is better)
Translates to: LRGHCVEACISPLAS*LHLKSSDRSCATGQ
Trigger: CTGTCCAGTTGCACAGCTTCTGTCACTGCTCTTCAGGTGCAGCAAGGAAGCCAGAGGGGATATGCAGGCTTCAACACAGTGGCCTCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp ATCCTGCTGGTGGCCTTGACCTTCACACGGTACCACTaGGGGACGCTCAGCCTTCTTCTAATGCTTCTGGAA +
Preference number: 6 (lower is better)
Translates to: ILLVALTFTRYH*GTLSLLLMLLE
Trigger: TTCCAGAAGCATTAGAAGAAGGCTGAGCGTCCCTCAGTGGTACCGTGTGAAGGTCAAGGCCACCAGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 72 bp ATGGTATATGCCTCCATACCATGGTGGGGTCGCACCTaGCAAGACATGTCCTGCGGAGCTTGGTTGACCGTT +
Preference number: 6 (lower is better)
Translates to: MVYASIPWWGRT*QDMSCGAWLTV
Trigger: AACGGTCAACCAAGCTCCGCAGGACATGTCTTGTCAGGTGCGACCCCACCATGGTATGGAGGCATATACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp GTCTTCACTCCTCTTAGAGGCCACTGTGTTGAAGCCTaGATATCCCCTCTGGCTTCCTTGCTGCACCTGAAG +
Preference number: 6 (lower is better)
Translates to: VFTPLRGHCVEA*ISPLASLLHLK
Trigger: CTTCAGGTGCAGCAAGGAAGCCAGAGGGGATATGCAGGCTTCAACACAGTGGCCTCTAAGAGGAGTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GTCACCGCCACAGTGCATGGCTGCACCTTGGAGCCGTaGCCATCTGTGATCTCAGTTGAAACAATGACTTTG +
Preference number: 6 (lower is better)
Translates to: VTATVHGCTLEP*PSVISVETMTL
Trigger: CAAAGTCATTGTTTCAACTGAGATCACAGATGGCCACGGCTCCAAGGTGCAGCCATGCACTGTGGCGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp TCGTGCCAGAGGCGGATCTTCTGGAGTGGACCCAGTTaGTTAGGTATGCTCAGAATGAAGGTGTGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SCQRRIFWSGPS*LGMLRMKVCLE
Trigger: TTCCAGGCACACCTTCATTCTGAGCATACCTAACCAACTGGGTCCACTCCAGAAGATCCGCCTCTGGCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CAGGCTTGTCCTGAGCATAGCTCCTTCACCATCACGTaGCTGATGAACCAGCATGGGGAAGATCCACTACTG +
Preference number: 6 (lower is better)
Translates to: QACPEHSSFTIT*LMNQHGEDPLL
Trigger: CAGTAGTGGATCTTCCCCATGCTGGTTCATCAGCCACGTGATGGTGAAGGAGCTATGCTCAGGACAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CCAAGCAAAGACAAGTGCTGCCAAGCAGATCATGAGTaGCTGGGTGATGAATGCGCAGCAGACCAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: PSKDKCCQADHE*LGDECAADQRE
Trigger: CTCTCTCTGGTCTGCTGCGCATTCATCACCCAGCCACTCATGATCTGCTTGGCAGCACTTGTCTTTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp GCATTTACCAGGGCTGAGGCAGTGGACACAAGTCGATaGGCCATGATTCTCTTCTGCACCCTGATGAGGTGG +
Preference number: 6 (lower is better)
Translates to: AFTRAEAVDTSR*AMILFCTLMRW
Trigger: CCACCTCATCAGGGTGCAGAAGAGAATCATGGCCAATCGACTTGTGTCCACTGCCTCAGCCCTGGTAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CAA 72 bp CCTCAGCACTCAGGCTTGGTCCTGCTTCCTGGAAGTTaGTACTGGTCCCTGGTTGTCTTCCTAGGGATAGCA +
Preference number: 6 (lower is better)
Translates to: PQHSGLVLLPGS*YWSLVVFLGIA
Trigger: TGCTATCCCTAGGAAGACAACCAGGGACCAGTACAAACTTCCAGGAAGCAGGACCAAGCCTGAGTGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp CACTGTGTTGAAGCCTGCATATCCCCTCTGGCTTCCTaGCTGCACCTGAAGAGCAGTGACAGAAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: HCVEACISPLAS*LHLKSSDRSCA
Trigger: TGCACAGCTTCTGTCACTGCTCTTCAGGTGCAGCAAGGAAGCCAGAGGGGATATGCAGGCTTCAACACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp GTGTCTCTGTCTTCACTCCTCTTAGAGGCCACTGTGTaGAAGCCTGCATATCCCCTCTGGCTTCCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: VSLSSLLLEATV*KPAYPLWLPCC
Trigger: GCAGCAAGGAAGCCAGAGGGGATATGCAGGCTTCAACACAGTGGCCTCTAAGAGGAGTGAAGACAGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GGACAGAGACAGGTGCAAGGTGATGGTAGCTGCAGTTaGCTTTTTCAGGAGACGATCCTGGCTGTGGATAGG +
Preference number: 6 (lower is better)
Translates to: GQRQVQGDGSCS*LFQETILAVDR
Trigger: CCTATCCACAGCCAGGATCGTCTCCTGAAAAAGTCAACTGCAGCTACCATCACCTTGCACCTGTCTCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp TGGAACTCTCAGGATGATACCAGGATGCAGAGAGGTTaGAGGTGTGAGAAATGCCAGGAGGAGGGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: WNSQDDTRMQRG*RCEKCQEEGWR
Trigger: TCTCCAACCCTCCTCCTGGCATTTCTCACACCTGCAACCTCTCTGCATCCTGGTATCATCCTGAGAGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 72 bp AGTGAGAGGACTGGAACTCTCAGGATGATACCAGGATaGAGAGAGGTTGCAGGTGTGAGAAATGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SERTGTLRMIPG*REVAGVRNARR
Trigger: CCTCCTGGCATTTCTCACACCTGCAACCTCTCTGCATCCTGGTATCATCCTGAGAGTTCCAGTCCTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 72 bp GGGGGTGGTTGGCAAGGCTCCCGCACGATGAAAAGCTaGTTTCTTAGGGTAGTGGAGCTGACATTATTGAAG +
Preference number: 6 (lower is better)
Translates to: GGGWQGSRTMKS*FLRVVELTLLK
Trigger: CTTCAATAATGTCAGCTCCACTACCCTAAGAAAGCAGCTTTTCATCGTGCGGGAGCCTTGCCAACCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 72 bp TGTCCCCTGCTAGAGACCGTCAGTGTCACAAGGAACTaGTCACAGCATTCACTGAGCCATTTTGCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: CPLLETVSVTRN*SQHSLSHFAGK
Trigger: CTTCCCAGCAAAATGGCTCAGTGAATGCTGTGACCAGTTCCTTGTGACACTGACGGTCTCTAGCAGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GCTGCAGTTGACTTTTTCAGGAGACGATCCTGGCTGTaGATAGGGACCTTCAGATCGCCACTCTGTCTTGTC +
Preference number: 6 (lower is better)
Translates to: AAVDFFRRRSWL*IGTFRSPLCLV
Trigger: GACAAGACAGAGTGGCGATCTGAAGGTCCCTATCCACAGCCAGGATCGTCTCCTGAAAAAGTCAACTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GAAGATCCACTACTGTCGTGCCAGAGGCGGATCTTCTaGAGTGGACCCAGTTGGTTAGGTATGCTCAGAATG +
Preference number: 6 (lower is better)
Translates to: EDPLLSCQRRIF*SGPSWLGMLRM
Trigger: CATTCTGAGCATACCTAACCAACTGGGTCCACTCCAGAAGATCCGCCTCTGGCACGACAGTAGTGGATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp CCTGCACTCAAAGGACACATTGGCATTTACCAGGGCTaGGGCAGTGGACACAAGTCGATTGGCCATGATTCT +
Preference number: 6 (lower is better)
Translates to: PALKGHIGIYQG*GSGHKSIGHDS
Trigger: AGAATCATGGCCAATCGACTTGTGTCCACTGCCTCAGCCCTGGTAAATGCCAATGTGTCCTTTGAGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 72 bp CCGTCAGTGTCACAAGGAACTGGTCACAGCATTCACTaGGCCATTTTGCTGGGAAGGAAATGGCAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: PSVSQGTGHSIH*AILLGRKWQEL
Trigger: AAGCTCCTGCCATTTCCTTCCCAGCAAAATGGCTCAGTGAATGCTGTGACCAGTTCCTTGTGACACTGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GGACCCAAGTTCTTCAAAACCACTGCCAGGAGCTTGTaGACTGGGAGGAGAGTAATGGCTCTTCTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: GPKFFKTTARSL*TGRRVMALLSQ
Trigger: CTGAGAGAGAAGAGCCATTACTCTCCTCCCAGTTCACAAGCTCCTGGCAGTGGTTTTGAAGAACTTGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp CACCAGTCTTCTGTGCTGCTGAGGTCCCCCAAGGAGTaGTTGGCCTTTCTTGTAAATGCTTTCCTGATGGCA +
Preference number: 6 (lower is better)
Translates to: HQSSVLLRSPKE*LAFLVNAFLMA
Trigger: TGCCATCAGGAAAGCATTTACAAGAAAGGCCAATCACTCCTTGGGGGACCTCAGCAGCACAGAAGACTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp ATGGATGAAAAACAATGCACCACGACTGTGCCTCTCTaGTGTGGGAGGGAGTCAGCAAAGGAAAGAGCTTCG +
Preference number: 6 (lower is better)
Translates to: MDEKQCTTTVPL*CGRESAKERAS
Trigger: CGAAGCTCTTTCCTTTGCTGACTCCCTCCCACAGCAGAGAGGCACAGTCGTGGTGCATTGTTTTTCATCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 72 bp AATGGCTCTTCTCTCTCAGATCATGATGCTTATGGCTaGAGGCCTCCATTGGGAACGGTGAACAGACCACAG +
Preference number: 6 (lower is better)
Translates to: NGSSLSDHDAYG*RPPLGTVNRPQ
Trigger: CTGTGGTCTGTTCACCGTTCCCAATGGAGGCCTGCAGCCATAAGCATCATGATCTGAGAGAGAAGAGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GCTGGGAAGGAAATGGCAGGAGCTTGCGTGTCCACTTaGTATGAAGTAGAGTTATCAAAGCAGGGCCACCTT +
Preference number: 6 (lower is better)
Translates to: AGKEMAGACVST*YEVELSKQGHL
Trigger: AAGGTGGCCCTGCTTTGATAACTCTACTTCATACCAAGTGGACACGCAAGCTCCTGCCATTTCCTTCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp TGTCGCTATAATAGGCTTCAAAATCATCAAAGTCAGTaGAAGAGCTGGGGGAGGGCCAGCTTCCCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: CRYNRLQNHQSQ*KSWGRASFPQS
Trigger: GCTCTGAGGGAAGCTGGCCCTCCCCCAGCTCTTCCACTGACTTTGATGATTTTGAAGCCTATTATAGCGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp ATGGTAGCTGCAGTTGACTTTTTCAGGAGACGATCCTaGCTGTGGATAGGGACCTTCAGATCGCCACTCTGT +
Preference number: 6 (lower is better)
Translates to: MVAAVDFFRRRS*LWIGTFRSPLC
Trigger: ACAGAGTGGCGATCTGAAGGTCCCTATCCACAGCCAGGATCGTCTCCTGAAAAAGTCAACTGCAGCTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp ATCCACTTGCTAGCCCTGAGGGCAGTCAGAGCTGCATaGGCTTCATGTCTTGTTTTTCCTAGGCTATGCATG +
Preference number: 6 (lower is better)
Translates to: IHLLALRAVRAA*ASCLVFPRLCM
Trigger: CATGCATAGCCTAGGAAAAACAAGACATGAAGCCCATGCAGCTCTGACTGCCCTCAGGGCTAGCAAGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp TTCTGTGCCCAGGATCACGCTTGTGAAGAGTTGTGTTaGAGGGTTGTAGAGAGTGAAGTGCACAGACATGGC +
Preference number: 6 (lower is better)
Translates to: FCAQDHACEELC*RVVESEVHRHG
Trigger: GCCATGTCTGTGCACTTCACTCTCTACAACCCTCCAACACAACTCTTCACAAGCGTGATCCTGGGCACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp CAGAAGGGGACTTCCACTGCACTCTTCTCTGTTGCATaGACTAGGAAGAGGTCCCAGGAATACGTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: QKGTSTALFSVA*TRKRSQEYVRS
Trigger: AGACCTCACGTATTCCTGGGACCTCTTCCTAGTCAATGCAACAGAGAAGAGTGCAGTGGAAGTCCCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp TGTGTTAGCAGCAAACACAGTTCCATTGGTATAGACAGACACGGATaGCATCTTATACCCAACAGTCACACCACACCAGGCCTGGCCGCT +
Preference number: 6 (lower is better)
Translates to: CVSSKHSSIGIDRHG*HLIPNSHTTPGLAA
Trigger: AGCGGCCAGGCCTGGTGTGGTGTGACTGTTGGGTATAAGATGCAATCCGTGTCTGTCTATACCAATGGAACTGTGTTTGCTGCTAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CAA 90 bp ACAGTACTACAGAAGGGGACTTCCACTGCACTCTTCTCTGTTGCATaGACTAGGAAGAGGTCCCAGGAATACGTGAGGTCTGGGACATCT +
Preference number: 6 (lower is better)
Translates to: TVLQKGTSTALFSVA*TRKRSQEYVRSGTS
Trigger: AGATGTCCCAGACCTCACGTATTCCTGGGACCTCTTCCTAGTCAATGCAACAGAGAAGAGTGCAGTGGAAGTCCCCTTCTGTAGTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp CCCTTGGTTGTCATCCCCCAGAGCTGGAAACAGAGGTGGATCACGTaGAGTACCAGGAACAGCAGCTCAGAAAGCATAAGAAGGTACTTT +
Preference number: 6 (lower is better)
Translates to: PLVVIPQSWKQRWIT*STRNSSSESIRRYF
Trigger: AAAGTACCTTCTTATGCTTTCTGAGCTGCTGTTCCTGGTACTCAACGTGATCCACCTCTGTTTCCAGCTCTGGGGGATGACAACCAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GAATGGTTTTATTGTCACAGCTGGTCCCATGATACCTaGTGTGGTGTAGCCATGGAAGGCAGCTTGGCTGAC +
Preference number: 6 (lower is better)
Translates to: EWFYCHSWSHDT*CGVAMEGSLAD
Trigger: GTCAGCCAAGCTGCCTTCCATGGCTACACCACATCAGGTATCATGGGACCAGCTGTGACAATAAAACCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp CATGGTAATGTAGTTCCTGGTTTCCATGTAACTTCCTaGCAGCCGGAGAGTAGACAGGCTTTCCAGAGTGGA +
Preference number: 6 (lower is better)
Translates to: HGNVVPGFHVTS*QPESRQAFQSG
Trigger: TCCACTCTGGAAAGCCTGTCTACTCTCCGGCTGGCAGGAAGTTACATGGAAACCAGGAACTACATTACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GAAGTGCCTGAGCATCTGTTTCTGGGAAGCAGCAGATaGCAAAGTGCTCAACATTTTCAGGCTGTGTCACCA +
Preference number: 6 (lower is better)
Translates to: EVPEHLFLGSSR*QSAQHFQAVSP
Trigger: TGGTGACACAGCCTGAAAATGTTGAGCACTTTGCCATCTGCTGCTTCCCAGAAACAGATGCTCAGGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 72 bp CCTTCTTCTAATGCTTCTGGAAGTTGTCATCACTGGTaGGTTCTCTCCGAAATACCAAGCGAACTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: PSSNASGSCHHW*VLSEIPSELQG
Trigger: CCCCTGGAGTTCGCTTGGTATTTCGGAGAGAACCCACCAGTGATGACAACTTCCAGAAGCATTAGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CAA 72 bp GAGACATTCTGTGCCCAGGATCACGCTTGTGAAGAGTaGTGTTGGAGGGTTGTAGAGAGTGAAGTGCACAGA +
Preference number: 6 (lower is better)
Translates to: ETFCAQDHACEE*CWRVVESEVHR
Trigger: TCTGTGCACTTCACTCTCTACAACCCTCCAACACAACTCTTCACAAGCGTGATCCTGGGCACAGAATGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp CGGAGAGACACTTCTTCATTCCAGTTCACAGAGATGTCTCTAAAGTaGACCCATGAGATGTGGACGAATCTGAAGGCCAAGTCAGGACGG +
Preference number: 6 (lower is better)
Translates to: RRDTSSFQFTEMSLK*THEMWTNLKAKSGR
Trigger: CCGTCCTGACTTGGCCTTCAGATTCGTCCACATCTCATGGGTCAACTTTAGAGACATCTCTGTGAACTGGAATGAAGAAGTGTCTCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp ATAGGGACCTTCAGATCGCCACTCTGTCTTGTCCCAGAACACACATaGGATCCACTGGAAATGCACTGTATAGTTTACAGCCCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: IGTFRSPLCLVPEHT*DPLEMHCIVYSPSK
Trigger: CTTGCTGGGGCTGTAAACTATACAGTGCATTTCCAGTGGATCCAATGTGTGTTCTGGGACAAGACAGAGTGGCGATCTGAAGGTCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp AATGAAAGTCCGGTTTCCCTGACATGCAGAAGACACTaGAGATGGTATATGCCTCCATACCATGGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: NESPVSLTCRRH*RWYMPPYHGGV
Trigger: GACCCCACCATGGTATGGAGGCATATACCATCTTCAGTGTCTTCTGCATGTCAGGGAAACCGGACTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp TTCTTTCCTGTACTGATGGTAGCCAGTCACAGTAGTTaGACCTGCCAATGTACACAGTCTCATCTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: FFPVLMVASHSS*TCQCTQSHLSS
Trigger: GGAGCTCAGATGAGACTGTGTACATTGGCAGGTGCAACTACTGTGACTGGCTACCATCAGTACAGGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS GCA 72 bp CTTGCTGTCATGTTTCCGTTTCCAAGCAAAGACAAGTaGTGCCAAGCAGATCATGAGTGGCTGGGTGATGAA +
Preference number: 6 (lower is better)
Translates to: LAVMFPFPSKDK*CQADHEWLGDE
Trigger: TTCATCACCCAGCCACTCATGATCTGCTTGGCAGCACTTGTCTTTGCTTGGAAACGGAAACATGACAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp GATGTTCACAGCAAGAGTAGTGAGGTGACCAGAGGCTaGATAGTAGGCTATTGCTACTCCAACCATAGAGAG +
Preference number: 6 (lower is better)
Translates to: DVHSKSSEVTRG*IVGYCYSNHRE
Trigger: CTCTCTATGGTTGGAGTAGCAATAGCCTACTATGCAGCCTCTGGTCACCTCACTACTCTTGCTGTGAACATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CAGCCTTCTTCTAATGCTTCTGGAAGTTGTCATCACTaGTGGGTTCTCTCCGAAATACCAAGCGAACTCCAG +
Preference number: 6 (lower is better)
Translates to: QPSSNASGSCHH*WVLSEIPSELQ
Trigger: CTGGAGTTCGCTTGGTATTTCGGAGAGAACCCACCAGTGATGACAACTTCCAGAAGCATTAGAAGAAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 72 bp TTCACAGAGATGTCTCTAAAGTTGACCCATGAGATGTaGACGAATCTGAAGGCCAAGTCAGGACGGGTAGAC +
Preference number: 6 (lower is better)
Translates to: FTEMSLKLTHEM*TNLKAKSGRVD
Trigger: GTCTACCCGTCCTGACTTGGCCTTCAGATTCGTCCACATCTCATGGGTCAACTTTAGAGACATCTCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp ATTGGCTCCTTTCCATGGAGCAGCAGGTACATACATTaGTACAGTCTGCTCATCCCAGAAGTAGACCCGCTT +
Preference number: 6 (lower is better)
Translates to: IGSFPWSSRYIH*YSLLIPEVDPL
Trigger: AAGCGGGTCTACTTCTGGGATGAGCAGACTGTACAAATGTATGTACCTGCTGCTCCATGGAAAGGAGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp ATATCCCACATTGGCTCCTTTCCATGGAGCAGCAGGTACATACATTaGTACAGTCTGCTCATCCCAGAAGTAGACCCGCTTCACAAGAAA +
Preference number: 6 (lower is better)
Translates to: ISHIGSFPWSSRYIH*YSLLIPEVDPLHKK
Trigger: TTTCTTGTGAAGCGGGTCTACTTCTGGGATGAGCAGACTGTACAAATGTATGTACCTGCTGCTCCATGGAAAGGAGCCAATGTGGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GTTCCTCGGCTCTATGAAAGTCATGGACAACAGCCTTaGGCTCATAGACTCCTTCTTTCCTGTACTGATGGT +
Preference number: 6 (lower is better)
Translates to: VPRLYESHGQQP*AHRLLLSCTDG
Trigger: ACCATCAGTACAGGAAAGAAGGAGTCTATGAGCTCAAGGCTGTTGTCCATGACTTTCATAGAGCCGAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS TCA 72 bp ATTCCAGTTCACAGAGATGTCTCTAAAGTTGACCCATaGGATGTGGACGAATCTGAAGGCCAAGTCAGGACG +
Preference number: 6 (lower is better)
Translates to: IPVHRDVSKVDP*DVDESEGQVRT
Trigger: CGTCCTGACTTGGCCTTCAGATTCGTCCACATCTCATGGGTCAACTTTAGAGACATCTCTGTGAACTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp TCAGTGAGAATGGTTTTATTGTCACAGCTGGTCCCATaGTACCTGATGTGGTGTAGCCATGGAAGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: SVRMVLLSQLVP*YLMWCSHGRQL
Trigger: AAGCTGCCTTCCATGGCTACACCACATCAGGTATCATGGGACCAGCTGTGACAATAAAACCATTCTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp CTGCACCTTGGAGCCGTGGCCATCTGTGATCTCAGTTaGAACAATGACTTTGTAATTGTCCGAAGAATCACC +
Preference number: 6 (lower is better)
Translates to: LHLGAVAICDLS*NNDFVIVRRIT
Trigger: GGTGATTCTTCGGACAATTACAAAGTCATTGTTTCAACTGAGATCACAGATGGCCACGGCTCCAAGGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp CTGAGCCATTTTGCTGGGAAGGAAATGGCAGGAGCTTaGGTGTCCACTTGGTATGAAGTAGAGTTATCAAAG +
Preference number: 6 (lower is better)
Translates to: LSHFAGKEMAGA*VSTWYEVELSK
Trigger: CTTTGATAACTCTACTTCATACCAAGTGGACACGCAAGCTCCTGCCATTTCCTTCCCAGCAAAATGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp GGAGCAAGTTGTGTGGGTGACTCTGAAACTCAGAAATaGTGCTCACTTCAAGAGTGGCATTCAGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: GASCVGDSETQK*CSLQEWHSAFF
Trigger: GAAGAAAGCTGAATGCCACTCTTGAAGTGAGCAGCATTTCTGAGTTTCAGAGTCACCCACACAACTTGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GGGAGGGAGTCAGCAAAGGAAAGAGCTTCGCTATCATaGATAGAGCTGGAATTCATGAAGACAGACACATTC +
Preference number: 6 (lower is better)
Translates to: GRESAKERASLS*IELEFMKTDTF
Trigger: GAATGTGTCTGTCTTCATGAATTCCAGCTCTATCCATGATAGCGAAGCTCTTTCCTTTGCTGACTCCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CCA 72 bp GACATTCACCTCATCCCGAAGCAACACAAACATGGCTaGATTTCTCTTGTGCAGGTAGTCTTCTTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: DIHLIPKQHKHG*ISLVQVVFFPK
Trigger: TTTGGGGAAGAAGACTACCTGCACAAGAGAAATCCAGCCATGTTTGTGTTGCTTCGGGATGAGGTGAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CAAGTTCTTCAAAACCACTGCCAGGAGCTTGTGAACTaGGAGGAGAGTAATGGCTCTTCTCTCTCAGATCAT +
Preference number: 6 (lower is better)
Translates to: QVLQNHCQELVN*EESNGSSLSDH
Trigger: ATGATCTGAGAGAGAAGAGCCATTACTCTCCTCCCAGTTCACAAGCTCCTGGCAGTGGTTTTGAAGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp AGCAAACACAGTTCCATTGGTATAGACAGACACGGATaGCATCTTATACCCAACAGTCACACCACACCAGGC +
Preference number: 6 (lower is better)
Translates to: SKHSSIGIDRHG*HLIPNSHTTPG
Trigger: GCCTGGTGTGGTGTGACTGTTGGGTATAAGATGCAATCCGTGTCTGTCTATACCAATGGAACTGTGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CAA 72 bp CCAGGGGACACATTTTGGTTCTCAAGGTCAAGGTCATaGCTGTGCATAGGAAGTACATCTTCCACAAGCTCT +
Preference number: 6 (lower is better)
Translates to: PGDTFWFSRSRS*LCIGSTSSTSS
Trigger: AGAGCTTGTGGAAGATGTACTTCCTATGCACAGCAATGACCTTGACCTTGAGAACCAAAATGTGTCCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp TTTTTGTCGACTAGCAACCTCCTGGAGAACTGGCCTTaGGCAAGGAACATCTTGGTGTATTTGAAGATGCAC +
Preference number: 6 (lower is better)
Translates to: FLSTSNLLENWP*ARNILVYLKMH
Trigger: GTGCATCTTCAAATACACCAAGATGTTCCTTGCTCAAGGCCAGTTCTCCAGGAGGTTGCTAGTCGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GCCCAGTGCTTACGTGAATTAGTAACATGTCAGAGATaGTCTTCATGCCTTCTTCCTGCAGATAGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: AQCLRELVTCQR*SSCLLPADSPH
Trigger: ATGGGGACTATCTGCAGGAAGAAGGCATGAAGATCATCTCTGACATGTTACTAATTCACGTAAGCACTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp AGAAGGGTCTGGAACTCCATCTGCCCAGTGCTTACGTaGATTAGTAACATGTCAGAGATGATCTTCATGCCT +
Preference number: 6 (lower is better)
Translates to: RRVWNSICPVLT*ISNMSEMIFMP
Trigger: AGGCATGAAGATCATCTCTGACATGTTACTAATTCACGTAAGCACTGGGCAGATGGAGTTCCAGACCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp GTGAGAGCCAGATGTGGAAATCCTCCAGGTACTCAGTaGACTTTGAATAGAAAAGCTTCCAGAAACCGAGAC +
Preference number: 6 (lower is better)
Translates to: VRARCGNPPGTQ*TLNRKASRNRD
Trigger: GTCTCGGTTTCTGGAAGCTTTTCTATTCAAAGTTCACTGAGTACCTGGAGGATTTCCACATCTGGCTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp TTCAGATCGCCACTCTGTCTTGTCCCAGAACACACATaGGATCCACTGGAAATGCACTGTATAGTTTACAGC +
Preference number: 6 (lower is better)
Translates to: FRSPLCLVPEHT*DPLEMHCIVYS
Trigger: GCTGTAAACTATACAGTGCATTTCCAGTGGATCCAATGTGTGTTCTGGGACAAGACAGAGTGGCGATCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp CCGGTAACGAAATTCATAATGAAAGTCCGGTTTCCCTaGCATGCAGAAGACACTGAAGATGGTATATGCCTC +
Preference number: 6 (lower is better)
Translates to: PVTKFIMKVRFP*HAEDTEDGICL
Trigger: GAGGCATATACCATCTTCAGTGTCTTCTGCATGTCAGGGAAACCGGACTTTCATTATGAATTTCGTTACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp ATAATGCTGGGTGTCTTGACCACGGTACAGGGTATGTaGGGAAGTGTTTCCTATCCGGTAACGAAATTCATA +
Preference number: 6 (lower is better)
Translates to: IMLGVLTTVQGM*GSVSYPVTKFI
Trigger: TATGAATTTCGTTACCGGATAGGAAACACTTCCTCACATACCCTGTACCGTGGTCAAGACACCCAGCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp AGAACTGGCCTTGAGCAAGGAACATCTTGGTGTATTTaGAGATGCACATGGCACTCGTCAAGCTCAACTTAT +
Preference number: 6 (lower is better)
Translates to: RTGLEQGTSWCI*RCTWHSSSSTY
Trigger: ATAAGTTGAGCTTGACGAGTGCCATGTGCATCTTCAAATACACCAAGATGTTCCTTGCTCAAGGCCAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp TCACTGCTGAGAAGGGTGTCATGGTGCTTAGAGAGCTaGGAAGATGAACATATTTCAACATCCAGAGGAACA +
Preference number: 6 (lower is better)
Translates to: SLLRRVSWCLES*EDEHISTSRGT
Trigger: TGTTCCTCTGGATGTTGAAATATGTTCATCTTCTCAGCTCTCTAAGCACCATGACACCCTTCTCAGCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp AAAAGCTGCTTTCTTAGGGTAGTGGAGCTGACATTATaGAAGGCAAGGACTTCAACTGTAAACTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: KSCFLRVVELTL*KARTSTVNSPS
Trigger: GGAGGGAGAGTTTACAGTTGAAGTCCTTGCCTTCAATAATGTCAGCTCCACTACCCTAAGAAAGCAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154153.8
CDS CAA 90 bp AGTAAGACATGCTTTGAAGCTACAGAAGCTTGTAAGACATATGTCTaGCCACTGCTCAGTGAGAATGGTTTTATTGTCACAGCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: SKTCFEATEACKTYV*PLLSENGFIVTAGP
Trigger: GGGACCAGCTGTGACAATAAAACCATTCTCACTGAGCAGTGGCAAGACATATGTCTTACAAGCTTCTGTAGCTTCAAAGCATGTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp AAGCTACAGAAGCTTGTAAGACATATGTCTTGCCACTaGTCAGTGAGAATGGTTTTATTGTCACAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: KLQKLVRHMSCH*SVRMVLLSQLV
Trigger: GACCAGCTGTGACAATAAAACCATTCTCACTGAGCAGTGGCAAGACATATGTCTTACAAGCTTCTGTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS GCA 72 bp GACACATTTTGGTTCTCAAGGTCAAGGTCATTGCTGTaGATAGGAAGTACATCTTCCACAAGCTCTGAGAAT +
Preference number: 6 (lower is better)
Translates to: DTFWFSRSRSLL*IGSTSSTSSEN
Trigger: ATTCTCAGAGCTTGTGGAAGATGTACTTCCTATGCACAGCAATGACCTTGACCTTGAGAACCAAAATGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp GGCTTAGAGAATTTGATGTGTATCTGTAAAGATTCCTaGGAGTTTTCTGAAAGCCCAGTAAACCGGTGGACA +
Preference number: 6 (lower is better)
Translates to: GLENLMCICKDS*EFSESPVNRWT
Trigger: TGTCCACCGGTTTACTGGGCTTTCAGAAAACTCCCAGGAATCTTTACAGATACACATCAAATTCTCTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp TTAAGTAGAGCTGAGCCTTGCCCAGTAAGACATGCTTaGAAGCTACAGAAGCTTGTAAGACATATGTCTTGC +
Preference number: 6 (lower is better)
Translates to: LSRAEPCPVRHA*KLQKLVRHMSC
Trigger: GCAAGACATATGTCTTACAAGCTTCTGTAGCTTCAAAGCATGTCTTACTGGGCAAGGCTCAGCTCTACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp GCACTGTATAGTTTACAGCCCCAGCAAGATATTTGTTaGGAGGTTTCCTGTCATAGTCAGCATCTAATAGCG +
Preference number: 6 (lower is better)
Translates to: ALYSLQPQQDIC*EVSCHSQHLIA
Trigger: CGCTATTAGATGCTGACTATGACAGGAAACCTCCAAACAAATATCTTGCTGGGGCTGTAAACTATACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp CATAGTCAGCATCTAATAGCGATAAATATCCCACATTaGCTCCTTTCCATGGAGCAGCAGGTACATACATTT +
Preference number: 6 (lower is better)
Translates to: HSQHLIAINIPH*LLSMEQQVHTF
Trigger: AAATGTATGTACCTGCTGCTCCATGGAAAGGAGCCAATGTGGGATATTTATCGCTATTAGATGCTGACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CCA 72 bp TGCTTTCCTGATGGCATGATTGAGAGAAATTTCACCTaGGCAGAATCTCCCATATGCTATAAACAAAAGCAG +
Preference number: 6 (lower is better)
Translates to: CFPDGMIERNFT*AESPICYKQKQ
Trigger: CTGCTTTTGTTTATAGCATATGGGAGATTCTGCCCAGGTGAAATTTCTCTCAATCATGCCATCAGGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp TGTCACGAGAGGTTTTCTGTGAGAAGACTTTCTGTTTaGGAAAACAGTCAGGAAGGTAGCTCTCAACATTCT +
Preference number: 6 (lower is better)
Translates to: CHERFSVRRLSV*ENSQEGSSQHS
Trigger: AGAATGTTGAGAGCTACCTTCCTGACTGTTTTCCAAAACAGAAAGTCTTCTCACAGAAAACCTCTCGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp ACTAACAGTATGATGGGAAAGGGTCTTGTAACGGGCTTAGAGAATTaGATGTGTATCTGTAAAGATTCCTGGGAGTTTTCTGAAAGCCCA +
Preference number: 6 (lower is better)
Translates to: TNSMMGKGLVTGLEN*MCICKDSWEFSESP
Trigger: TGGGCTTTCAGAAAACTCCCAGGAATCTTTACAGATACACATCAAATTCTCTAAGCCCGTTACAAGACCCTTTCCCATCATACTGTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 72 bp TGCTTTGAAGCTACAGAAGCTTGTAAGACATATGTCTaGCCACTGCTCAGTGAGAATGGTTTTATTGTCACA +
Preference number: 6 (lower is better)
Translates to: CFEATEACKTYV*PLLSENGFIVT
Trigger: TGTGACAATAAAACCATTCTCACTGAGCAGTGGCAAGACATATGTCTTACAAGCTTCTGTAGCTTCAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS CAA 90 bp ACTGGAAATGCACTGTATAGTTTACAGCCCCAGCAAGATATTTGTTaGGAGGTTTCCTGTCATAGTCAGCATCTAATAGCGATAAATATC +
Preference number: 6 (lower is better)
Translates to: TGNALYSLQPQQDIC*EVSCHSQHLIAINI
Trigger: GATATTTATCGCTATTAGATGCTGACTATGACAGGAAACCTCCAAACAAATATCTTGCTGGGGCTGTAAACTATACAGTGCATTTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2
CDS TCA 72 bp ACCATCGATCTTCATCAGAAGTTCATCCAAGAGACTTaGAAATTCATCCAGGTAATAAATATGGTCTGTAGC +
Preference number: 6 (lower is better)
Translates to: TIDLHQKFIQET*KFIQVINMVCS
Trigger: GCTACAGACCATATTTATTACCTGGATGAATTTTCAAGTCTCTTGGATGAACTTCTGATGAAGATCGATGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154153.8
ENSMUST00000178195.2