RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PJA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034403

Ensembl transcript IDs: ENSMUST00000036354.7, ENSMUST00000113790.8, ENSMUST00000113792.2, ENSMUST00000113797.4, ENSMUST00000167246.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTTCTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATaGAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACA +
Preference number: 1 (lower is better)
Translates to: FSTGENTETQYFCCK*KGSIWSYLVSRFQT
Trigger: TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR-3UTR GCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTAAGCTTTTACACCACTaGAAATACAGGAACATTAAC +
Preference number: 2 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFKLLHH*KYRNIN
Trigger: GTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTT...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR-3UTR CCA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCAAGTCTACAGAACAAGTaGGATTTGTTTCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPSLQNK*DLFQLS
Trigger: TGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACT...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR-3UTR CCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTAAGTCTACAGAACAAGTaGGATTTGTTTCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVSLQNK*DLFQLS
Trigger: TGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACT...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR-3UTR GCA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGAAAGCTTTTACACCACTaGAAATACAGGAACATTAAC +
Preference number: 2 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRKLLHH*KYRNIN
Trigger: GTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTT...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR TCA 72 bp GTTACCTGGTATCACGATTTCAGACAAAAATCCAAATaGTGCCATTGTTCTGTGTCAAAGCAAAAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: VTWYHDFRQKSK*CHCSVSKQKKN
Trigger: GTTCTTCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR-3UTR CAA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTATCCAAATGATGCCATaGTTCTGTGTCAAAGCAAAA +
Preference number: 3 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFIQMMP*FCVKAK
Trigger: TTTTGCTTTGACACAGAACAATGGCATCATTTGGAT...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAGCGGGGGAGGGAACATaGAGCGGCACACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTAGEGT*SGTLGR
Trigger: CCTGCCCAGTGTGCCGCTGCATGTTCCCTCCCCCGC...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAGCTAGGCCCTCGGCATaGGCCTCCTCAGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: VANARDQFGVTWYHDFRQARPSA*ASSASA
Trigger: TGCCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGC...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGCGGGGGAGGGAACATaGAGCGGCACACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEAGEGT*SGTLGR
Trigger: CCTGCCCAGTGTGCCGCTGCATGTTCCCTCCCCCGC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGCTAGGCCCTCGGCATaGGCCTCCTCAGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEARPSA*ASSASA
Trigger: TGCCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCGCGGGGGAGGGAACATaGAGCGGCACACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDAAGEGT*SGTLGR
Trigger: CCTGCCCAGTGTGCCGCTGCATGTTCCCTCCCCCGC...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGCGGGGGAGGGAACATaGAGCGGCACACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKAGEGT*SGTLGR
Trigger: CCTGCCCAGTGTGCCGCTGCATGTTCCCTCCCCCGC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAACACCTCGGCCTCTTCTaGCTAGGCCCTCGGCATGAG +
Preference number: 4 (lower is better)
Translates to: VANARDQFGVTWYHDFRQHLGLF*LGPRHE
Trigger: CTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTG...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACATCTCCGCTGGAGGACTaGGGTTGCTCTCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTSPLED*GCSRLR
Trigger: CCGAAGCCGAGAGCAACCCCAGTCCTCCAGCGGAGA...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGCTAGGCCCTCGGCATaGGCCTCCTCAGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKARPSA*ASSASA
Trigger: TGCCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCGCTAGGCCCTCGGCATaGGCCTCCTCAGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDAARPSA*ASSASA
Trigger: TGCCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGC...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAACACCTCGGCCTCTTCTaGCTAGGCCCTCGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LQMQGINLELPGITISDKHLGLF*LGPRHE
Trigger: CTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTG...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACACCTCGGCCTCTTCTaGCTAGGCCCTCGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEHLGLF*LGPRHE
Trigger: CTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATCTCCGCTGGAGGACTaGGGTTGCTCTCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLESPLED*GCSRLR
Trigger: CCGAAGCCGAGAGCAACCCCAGTCCTCCAGCGGAGA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATCTCCGCTGGAGGACTaGGGTTGCTCTCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: ARDQFGVTWYHDFRQKSKSPLED*GCSRLR
Trigger: CCGAAGCCGAGAGCAACCCCAGTCCTCCAGCGGAGA...TTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAGCCGTCTCCATTGCCTaGGCCAGACGCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTAVSIA*ARRSSR
Trigger: TCTGGAAGAGCGTCTGGCCCAGGCAATGGAGACGGC...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAGCATACCTTGGCTCTaGGCTGCTGGCAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLESIPWL*AAGSLT
Trigger: GGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCT...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACACAGGTGCCAGACTTCTaGAGCCAGATGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTQVPDF*SQMDTQ
Trigger: CTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTG...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACCAGAAGTCAGGGTCTaGCATGGTTCGCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEPEVRV*HGSPPS
Trigger: AGACGGCGGCGAACCATGGCAGACCCTGACTTCTGG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGGCTTCGGTACTTCCTaGGCAGGGCAGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEGFGTS*AGQPST
Trigger: AGTGGATGGCTGCCCTGCGCAGGAAGTACCGAAGCC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACCACTGCCATTGCTaGCAGCACTGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLENHCHC*QHWRGS
Trigger: GGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTT...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAAAACCACTGCCATTGCTaGCAGCACTGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQNHCHC*QHWRGS
Trigger: GGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTT...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACACCTCGGCCTCTTCTaGCTAGGCCCTCGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKHLGLF*LGPRHE
Trigger: CTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCCACCTCGGCCTCTTCTaGCTAGGCCCTCGGCATGAG +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDAHLGLF*LGPRHE
Trigger: CTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTG...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGGTTCGCCGCCGTCTTaGCACTTTGTCTGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEGSPPS*HFVCLR
Trigger: GCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTCTCCGCTGGAGGACTaGGGTTGCTCTCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: NTFVANARDQFGVTWYHDSPLED*GCSRLR
Trigger: CCGAAGCCGAGAGCAACCCCAGTCCTCCAGCGGAGA...ATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACATGCAGCGGCACACTaGGCAGGTGCCAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEHAAAH*AGARLL
Trigger: CAGAAGTCTGGCACCTGCCCAGTGTGCCGCTGCATG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAAGCATACCTTGGCTCTaGGCTGCTGGCAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQSIPWL*AAGSLT
Trigger: GGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCT...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTAGCATACCTTGGCTCTaGGCTGCTGGCAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFSIPWL*AAGSLT
Trigger: GGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCT...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAAGCATACCTTGGCTCTaGGCTGCTGGCAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKSIPWL*AAGSLT
Trigger: GGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCT...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAACACCATGATCTTCGGTaGCCAGGATCTCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VANARDQFGVTWYHDFRQHHDLR*PGSQEG
Trigger: CCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTG...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATGGCCCACTGCACCATaGTCTTCGGTGACCAGGATC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEWPTAP*SSVTRI
Trigger: GATCCTGGTCACCGAAGATCATGGTGCAGTGGGCCA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACAGGTGCCAGACTTCTaGAGCCAGATGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEQVPDF*SQMDTQ
Trigger: CTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACCAGAAGTCAGGGTCTaGCATGGTTCGCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKPEVRV*HGSPPS
Trigger: AGACGGCGGCGAACCATGGCAGACCCTGACTTCTGG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCACCAGAAGTCAGGGTCTaGCATGGTTCGCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPPEVRV*HGSPPS
Trigger: AGACGGCGGCGAACCATGGCAGACCCTGACTTCTGG...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATCCAGAAGTCAGGGTCTaGCATGGTTCGCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: NTFVANARDQFGVTWYHDPEVRV*HGSPPS
Trigger: AGACGGCGGCGAACCATGGCAGACCCTGACTTCTGG...ATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTAGGCTTCGGTACTTCCTaGGCAGGGCAGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVGFGTS*AGQPST
Trigger: AGTGGATGGCTGCCCTGCGCAGGAAGTACCGAAGCC...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCGGCTTCGGTACTTCCTaGGCAGGGCAGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDAGFGTS*AGQPST
Trigger: AGTGGATGGCTGCCCTGCGCAGGAAGTACCGAAGCC...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGGCTTCGGTACTTCCTaGGCAGGGCAGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMGFGTS*AGQPST
Trigger: AGTGGATGGCTGCCCTGCGCAGGAAGTACCGAAGCC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACTGGAGGACTGGGGTTaGTCTCGGCTTCGGTACTTC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLELEDWG*SRLRYF
Trigger: GAAGTACCGAAGCCGAGAGCAACCCCAGTCCTCCAG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAAACCACTGCCATTGCTaGCAGCACTGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQNHCHC*QHWRGS
Trigger: GGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTT...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTAACCACTGCCATTGCTaGCAGCACTGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFNHCHC*QHWRGS
Trigger: GGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTT...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTAAACCACTGCCATTGCTaGCAGCACTGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVNHCHC*QHWRGS
Trigger: GGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTT...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAAGATAACCACTGCCATTaGTGCCAGCACTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: ARDQFGVTWYHDFRQKSKDNHCH*CQHWRG
Trigger: GCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATC...TTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGATAACCACTGCCATTaGTGCCAGCACTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEDNHCH*CQHWRG
Trigger: GCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAAGATAACCACTGCCATTaGTGCCAGCACTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQDNHCH*CQHWRG
Trigger: GCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATC...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGAGAGACTCCAAGTGTaGCAGGGCCGTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEERLQV*QGRLHC
Trigger: GCAATGGAGACGGCCCTGGCACACTTGGAGTCTCTC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAGAGAGACTCCAAGTGTaGCAGGGCCGTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: LQMQGINLELPGITISDKERLQV*QGRLHC
Trigger: GCAATGGAGACGGCCCTGGCACACTTGGAGTCTCTC...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAAGGCACACTGGGCAGGTaGCAGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ARDQFGVTWYHDFRQKSKGTLGR*QTSEAR
Trigger: TCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCC...TTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGGTTCGCCGCCGTCTTaGCACTTTGTCTGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKGSPPS*HFVCLR
Trigger: GCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATGGTTCGCCGCCGTCTTaGCACTTTGTCTGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: NTFVANARDQFGVTWYHDGSPPS*HFVCLR
Trigger: GCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACC...ATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAGCCGTCTCCATTGCCTaGGCCAGACGCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQAVSIA*ARRSSR
Trigger: TCTGGAAGAGCGTCTGGCCCAGGCAATGGAGACGGC...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGCCGTCTCCATTGCCTaGGCCAGACGCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMAVSIA*ARRSSR
Trigger: TCTGGAAGAGCGTCTGGCCCAGGCAATGGAGACGGC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGCCGTCTCCATTGCCTaGGCCAGACGCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKAVSIA*ARRSSR
Trigger: TCTGGAAGAGCGTCTGGCCCAGGCAATGGAGACGGC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACACTCCTTGCTTGCTGGTaGGTTGGCCACTTCGACATC +
Preference number: 4 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTLLACW*VGHFDI
Trigger: GATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAG...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAAGCTCTCCTTGCTTGCTaGTGGGTTGGCCACTTCGAC +
Preference number: 4 (lower is better)
Translates to: ARDQFGVTWYHDFRQKSKALLAC*WVGHFD
Trigger: GTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGC...TTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGCTCTCCTTGCTTGCTaGTGGGTTGGCCACTTCGAC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEALLAC*WVGHFD
Trigger: GTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAACATGCAGCGGCACACTaGGCAGGTGCCAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQHAAAH*AGARLL
Trigger: CAGAAGTCTGGCACCTGCCCAGTGTGCCGCTGCATG...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCATGCAGCGGCACACTaGGCAGGTGCCAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMHAAAH*AGARLL
Trigger: CAGAAGTCTGGCACCTGCCCAGTGTGCCGCTGCATG...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTACATGCAGCGGCACACTaGGCAGGTGCCAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVHAAAH*AGARLL
Trigger: CAGAAGTCTGGCACCTGCCCAGTGTGCCGCTGCATG...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACACCATGATCTTCGGTaGCCAGGATCTCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEHHDLR*PGSQEG
Trigger: CCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAACACCATGATCTTCGGTaGCCAGGATCTCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQHHDLR*PGSQEG
Trigger: CCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTG...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAATGGCCCACTGCACCATaGTCTTCGGTGACCAGGATC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQWPTAP*SSVTRI
Trigger: GATCCTGGTCACCGAAGATCATGGTGCAGTGGGCCA...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAACAGGTGCCAGACTTCTaGAGCCAGATGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQQVPDF*SQMDTQ
Trigger: CTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTG...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTACAGGTGCCAGACTTCTaGAGCCAGATGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVQVPDF*SQMDTQ
Trigger: CTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTG...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACAGGTGCCAGACTTCTaGAGCCAGATGGACACGCAG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKQVPDF*SQMDTQ
Trigger: CTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAAGCGGGAAGACCTTaGCCCCTTCTCGGGATCATC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEKAGRP*PLLGII
Trigger: GATGATCCCGAGAAGGGGGCAAGGTCTTCCCGCTTT...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACTGGAGGACTGGGGTTaGTCTCGGCTTCGGTACTTC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKLEDWG*SRLRYF
Trigger: GAAGTACCGAAGCCGAGAGCAACCCCAGTCCTCCAG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCCTGGAGGACTGGGGTTaGTCTCGGCTTCGGTACTTC +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDALEDWG*SRLRYF
Trigger: GAAGTACCGAAGCCGAGAGCAACCCCAGTCCTCCAG...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGATAACCACTGCCATTaGTGCCAGCACTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKDNHCH*CQHWRG
Trigger: GCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGATAACCACTGCCATTaGTGCCAGCACTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMDNHCH*CQHWRG
Trigger: GCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACACTTCAGGATAACCACTaGCATTGCTGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTLQDNH*HCCQHW
Trigger: CCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAG...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAACTTCAGGATAACCACTaGCATTGCTGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: VANARDQFGVTWYHDFRQLQDNH*HCCQHW
Trigger: CCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAG...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCGAGAGACTCCAAGTGTaGCAGGGCCGTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDAERLQV*QGRLHC
Trigger: GCAATGGAGACGGCCCTGGCACACTTGGAGTCTCTC...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGAGAGACTCCAAGTGTaGCAGGGCCGTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKERLQV*QGRLHC
Trigger: GCAATGGAGACGGCCCTGGCACACTTGGAGTCTCTC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAATGCTCTCCTTGCTTaGTGGTGGGTTGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTNALLA*WWVGHF
Trigger: GAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATT...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAGGCACACTGGGCAGGTaGCAGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQGTLGR*QTSEAR
Trigger: TCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCC...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGGCACACTGGGCAGGTaGCAGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKGTLGR*QTSEAR
Trigger: TCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTGGCACACTGGGCAGGTaGCAGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFGTLGR*QTSEAR
Trigger: TCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCC...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAGCTGTTGTCCTCCTCTaGCTGGCAATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LQMQGINLELPGITISDKAVVLL*LAILSW
Trigger: CCAGGAAAGGATTGCCAGCCAGAGGAGGACAACAGC...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAAGCTTTCCCTCTCACTaGCAGTCGGTCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQSFPSH*QSVNRP
Trigger: GGGCCTGTTGACCGACTGCCAGTGAGAGGGAAAGCT...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAGGTCTTCGCTCACGCTaGAGTCATCTTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: VANARDQFGVTWYHDFRQGLRSR*SHLPGC
Trigger: ACAACCTGGAAGATGACTCCAGCGTGAGCGAAGACC...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATGCTTGCTGGTGGGTTaGCCACTTCGACATCAACGG +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQCLLVG*PLRHQR
Trigger: CCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCA...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGCTCTCCTTGCTTGCTaGTGGGTTGGCCACTTCGAC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKALLAC*WVGHFD
Trigger: GTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAGCTCTCCTTGCTTGCTaGTGGGTTGGCCACTTCGAC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQALLAC*WVGHFD
Trigger: GTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGC...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAACTTCTGAAGCCAGATaGACACGCAGGGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VANARDQFGVTWYHDFRQTSEAR*TRRACG
Trigger: TCCACAAGCCCTGCGTGTCCATCTGGCTTCAGAAGT...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCACCATGATCTTCGGTaGCCAGGATCTCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMHHDLR*PGSQEG
Trigger: CCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTG...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACACCATGATCTTCGGTaGCCAGGATCTCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKHHDLR*PGSQEG
Trigger: CCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTAAAGCGGGAAGACCTTaGCCCCTTCTCGGGATCATC +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFKAGRP*PLLGII
Trigger: GATGATCCCGAGAAGGGGGCAAGGTCTTCCCGCTTT...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGACTGGAGGACTGGGGTTaGTCTCGGCTTCGGTACTTC +
Preference number: 4 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRLEDWG*SRLRYF
Trigger: GAAGTACCGAAGCCGAGAGCAACCCCAGTCCTCCAG...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACTTCAGGATAACCACTaGCATTGCTGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLELQDNH*HCCQHW
Trigger: CCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGAGAGAGACTCCAAGTGTaGCAGGGCCGTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRERLQV*QGRLHC
Trigger: GCAATGGAGACGGCCCTGGCACACTTGGAGTCTCTC...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAATGCTCTCCTTGCTTaGTGGTGGGTTGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLENALLA*WWVGHF
Trigger: GAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATT...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACAGGAAGGGCATCAATaGTCTCCTTGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEQEGHQ*SPCLLV
Trigger: CACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACATTTCCTGGCCCACTaGACCATGATCTTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEHFLAH*TMIFGD
Trigger: GTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAACATTTCCTGGCCCACTaGACCATGATCTTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQHFLAH*TMIFGD
Trigger: GTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATG...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAACATTTCCTGGCCCACTaGACCATGATCTTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LQMQGINLELPGITISDKHFLAH*TMIFGD
Trigger: GTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATG...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGAGGCACACTGGGCAGGTaGCAGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRGTLGR*QTSEAR
Trigger: TCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCC...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAGCTGTTGTCCTCCTCTaGCTGGCAATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQAVVLL*LAILSW
Trigger: CCAGGAAAGGATTGCCAGCCAGAGGAGGACAACAGC...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATGCTGTTGTCCTCCTCTaGCTGGCAATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NTFVANARDQFGVTWYHDAVVLL*LAILSW
Trigger: CCAGGAAAGGATTGCCAGCCAGAGGAGGACAACAGC...ATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGCTGTTGTCCTCCTCTaGCTGGCAATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKAVVLL*LAILSW
Trigger: CCAGGAAAGGATTGCCAGCCAGAGGAGGACAACAGC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCAGCTGTTGTCCTCCTCTaGCTGGCAATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPAVVLL*LAILSW
Trigger: CCAGGAAAGGATTGCCAGCCAGAGGAGGACAACAGC...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGAAGCTTTCCCTCTCACTaGCAGTCGGTCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRSFPSH*QSVNRP
Trigger: GGGCCTGTTGACCGACTGCCAGTGAGAGGGAAAGCT...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAATTCCTCGGCACTCTTTaGGGTGTTTTCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQFLGTL*GVFPTT
Trigger: GGTGGTGGGGAAAACACCCCAAAGAGTGCCGAGGAA...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTTTCCTCGGCACTCTTTaGGGTGTTTTCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFFLGTL*GVFPTT
Trigger: GGTGGTGGGGAAAACACCCCAAAGAGTGCCGAGGAA...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCATTCCTCGGCACTCTTTaGGGTGTTTTCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPFLGTL*GVFPTT
Trigger: GGTGGTGGGGAAAACACCCCAAAGAGTGCCGAGGAA...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACCACATTCCGGACTTTaGGTCTCACCACCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKPHSGL*VSPPVP
Trigger: AGGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTACCACATTCCGGACTTTaGGTCTCACCACCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVPHSGL*VSPPVP
Trigger: AGGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGG...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTCCACATTCCGGACTTTaGGTCTCACCACCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFPHSGL*VSPPVP
Trigger: AGGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGG...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAATGCTTGCTGGTGGGTTaGCCACTTCGACATCAACGG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKCLLVG*PLRHQR
Trigger: CCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCA...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCATGCTTGCTGGTGGGTTaGCCACTTCGACATCAACGG +
Preference number: 4 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPCLLVG*PLRHQR
Trigger: CCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCA...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAACTCCTTGCTTGCTGGTaGGTTGGCCACTTCGACATC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQLLACW*VGHFDI
Trigger: GATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAG...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACTCCTTGCTTGCTGGTaGGTTGGCCACTTCGACATC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKLLACW*VGHFDI
Trigger: GATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTCTCCTTGCTTGCTGGTaGGTTGGCCACTTCGACATC +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFLLACW*VGHFDI
Trigger: GATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAG...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAACTTCTGAAGCCAGATaGACACGCAGGGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLETSEAR*TRRACG
Trigger: TCCACAAGCCCTGCGTGTCCATCTGGCTTCAGAAGT...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGAAAAGCGGGAAGACCTTaGCCCCTTCTCGGGATCATC +
Preference number: 4 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRKAGRP*PLLGII
Trigger: GATGATCCCGAGAAGGGGGCAAGGTCTTCCCGCTTT...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGGGGTGATTCTACCTTaGCACACTCTTCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEGVILP*HTLPSH
Trigger: ATGCGAAGGAAGAGTGTGGCAAGGTAGAATCACCCC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGTTACCTTTTGCAGCTaGCCTGCCTTCAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEVTFCS*PAFSRR
Trigger: TCTTCTGCTGAAGGCAGGGCAGCTGCAAAAGGTAAC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAAGTTACCTTTTGCAGCTaGCCTGCCTTCAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQVTFCS*PAFSRR
Trigger: TCTTCTGCTGAAGGCAGGGCAGCTGCAAAAGGTAAC...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACTTCAGGATAACCACTaGCATTGCTGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKLQDNH*HCCQHW
Trigger: CCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAAATGCTCTCCTTGCTTaGTGGTGGGTTGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQNALLA*WWVGHF
Trigger: GAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATT...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCAGGAAGGGCATCAATaGTCTCCTTGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMQEGHQ*SPCLLV
Trigger: CACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTG...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACAGGAAGGGCATCAATaGTCTCCTTGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKQEGHQ*SPCLLV
Trigger: CACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATCAGGAAGGGCATCAATaGTCTCCTTGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: NTFVANARDQFGVTWYHDQEGHQ*SPCLLV
Trigger: CACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTG...ATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAACATTTCCTGGCCCACTaGACCATGATCTTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQHFLAH*TMIFGD
Trigger: GTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATG...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACATTTCCTGGCCCACTaGACCATGATCTTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKHFLAH*TMIFGD
Trigger: GTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACAGCATCCCGCCACCTaGAAGTACTGTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKQHPAT*KYCVVH
Trigger: ATGTACCACACAGTACTTCCAGGTGGCGGGATGCTG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCAGCATCCCGCCACCTaGAAGTACTGTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMQHPAT*KYCVVH
Trigger: ATGTACCACACAGTACTTCCAGGTGGCGGGATGCTG...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCACAGCATCCCGCCACCTaGAAGTACTGTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPQHPAT*KYCVVH
Trigger: ATGTACCACACAGTACTTCCAGGTGGCGGGATGCTG...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATCGCTTGTTCACTCCTaGCATCCTGGTCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLESLVHS*HPGLQH
Trigger: ATGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGGTCTTCGCTCACGCTaGAGTCATCTTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKGLRSR*SHLPGC
Trigger: ACAACCTGGAAGATGACTCCAGCGTGAGCGAAGACC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTGGTCTTCGCTCACGCTaGAGTCATCTTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFGLRSR*SHLPGC
Trigger: ACAACCTGGAAGATGACTCCAGCGTGAGCGAAGACC...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATGGTCTTCGCTCACGCTaGAGTCATCTTCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NTFVANARDQFGVTWYHDGLRSR*SHLPGC
Trigger: ACAACCTGGAAGATGACTCCAGCGTGAGCGAAGACC...ATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAACTTCTGAAGCCAGATaGACACGCAGGGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKTSEAR*TRRACG
Trigger: TCCACAAGCCCTGCGTGTCCATCTGGCTTCAGAAGT...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTAACTTCTGAAGCCAGATaGACACGCAGGGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVTSEAR*TRRACG
Trigger: TCCACAAGCCCTGCGTGTCCATCTGGCTTCAGAAGT...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAACAGCATCCCGCCACCTaGAAGTACTGGAATAATCCT +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQQHPAT*KYWNNP
Trigger: AGGATTATTCCAGTACTTCCAGGTGGCGGGATGCTG...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113790.8
CDS-3UTR TCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGCTTTGATTGGCAGTTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEALIGS*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAACTGCCAATCAAAGC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGGGGTGATTCTACCTTaGCACACTCTTCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKGVILP*HTLPSH
Trigger: ATGCGAAGGAAGAGTGTGGCAAGGTAGAATCACCCC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGTTACCTTTTGCAGCTaGCCTGCCTTCAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMVTFCS*PAFSRR
Trigger: TCTTCTGCTGAAGGCAGGGCAGCTGCAAAAGGTAAC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGGCCCTGTACTCTCTTaGAGGATACCTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEGPVLS*RIPGII
Trigger: GATTATTCCAGGTATCCTCCAAGAGAGTACAGGGCC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAGGCCCTGTACTCTCTTaGAGGATACCTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: LQMQGINLELPGITISDKGPVLS*RIPGII
Trigger: GATTATTCCAGGTATCCTCCAAGAGAGTACAGGGCC...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAATCGCTTGTTCACTCCTaGCATCCTGGTCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKSLVHS*HPGLQH
Trigger: ATGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGA...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTTCGCTTGTTCACTCCTaGCATCCTGGTCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFSLVHS*HPGLQH
Trigger: ATGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGA...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAGCTTTGATTGGCAGTTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQALIGS*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAACTGCCAATCAAAGC...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGCTTTGATTGGCAGTTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMALIGS*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAACTGCCAATCAAAGC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGCTTTGATTGGCAGTTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKALIGS*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAACTGCCAATCAAAGC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR TCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTAGCTTTGATTGGCAGTTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVALIGS*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAACTGCCAATCAAAGC...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAACTTTTGCAGCTGCCCTaGCTTCAGCAGAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQLLQLP*LQQKKS
Trigger: AGATTTCTTCTGCTGAAGGCAGGGCAGCTGCAAAAG...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACTTTTGCAGCTGCCCTaGCTTCAGCAGAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKLLQLP*LQQKKS
Trigger: AGATTTCTTCTGCTGAAGGCAGGGCAGCTGCAAAAG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCCTTTTGCAGCTGCCCTaGCTTCAGCAGAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDALLQLP*LQQKKS
Trigger: AGATTTCTTCTGCTGAAGGCAGGGCAGCTGCAAAAG...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATATCACCCTCGCTGCTaGTTTCATTCTCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEYHPRC*FHSHCS
Trigger: GCTACAATGAGAATGAAAGCAGCAGCGAGGGTGATA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGATCGCTTGTTCACTCCTaGCATCCTGGTCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRSLVHS*HPGLQH
Trigger: ATGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGA...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAACACTTTGGGTTTCATaGAGTTTGGAGTCGCCACAT +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQTLWVS*SLESPH
Trigger: ATGTGGCGACTCCAAACTGCATGAAACCCAAAGTGT...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAACACTTTGGGTTTCATaGAGTTTGGAGTCGCCACAT +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKTLWVS*SLESPH
Trigger: ATGTGGCGACTCCAAACTGCATGAAACCCAAAGTGT...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCTATCACCCTCGCTGCTaGTTTCATTCTCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: INLELPGITISDKNPNDAYHPRC*FHSHCS
Trigger: GCTACAATGAGAATGAAAGCAGCAGCGAGGGTGATA...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR GCA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAATATCACCCTCGCTGCTaGTTTCATTCTCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKYHPRC*FHSHCS
Trigger: GCTACAATGAGAATGAAAGCAGCAGCGAGGGTGATA...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATCCTCTTGCTTTGATTaGCAGTTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: RETQSTEQVGFVSTFRLESSCFD*QLICAL
Trigger: CAATGCACAGATCAACTGCCAATCAAAGCAAGAGGA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAATCCTCTTGCTTTGATTaGCAGTTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: LQMQGINLELPGITISDKSSCFD*QLICAL
Trigger: CAATGCACAGATCAACTGCCAATCAAAGCAAGAGGA...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATCCTCTTGCTTTGATTaGCAGTTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: LQVRTLKHNTFVANARDQSSCFD*QLICAL
Trigger: CAATGCACAGATCAACTGCCAATCAAAGCAAGAGGA...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAACTCTTGGAGGATACCTaGAATAATCCTCACTCTCAA +
Preference number: 4 (lower is better)
Translates to: ARDQFGVTWYHDFRQKSKLLEDT*NNPHSQ
Trigger: TTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAG...TTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTAGCCACCTGGAAGTACTaGAATAATCCTCACTCTCAA +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVATWKY*NNPHSQ
Trigger: TTGAGAGTGAGGATTATTCCAGTACTTCCAGGTGGC...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113790.8
CDS-3UTR CCA 90 bp GAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCCTCTTGCTTTGATTaGCAGTTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: ETQYFCCKCKGSIWSYLVSSCFD*QLICAL
Trigger: CAATGCACAGATCAACTGCCAATCAAAGCAAGAGGA...TACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAACTCTTGGAGGATACCTaGAATAATCCTCACTCTCAA +
Preference number: 4 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQLLEDT*NNPHSQ
Trigger: TTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAG...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CCA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCTCTTGGAGGATACCTaGAATAATCCTCACTCTCAA +
Preference number: 4 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMLLEDT*NNPHSQ
Trigger: TTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAG...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR CAA 72 bp ACCCATTCTGACAGTTTCTGTTTTCTCAAAGGTGATTaGTACTTGCTCACCCGTACACTTTGGATTCATTTT +
Preference number: 4 (lower is better)
Translates to: THSDSFCFLKGD*YLLTRTLWIHF
Trigger: AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACAGAAACTGTCAGAATGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
3UTR CAA 72 bp AACACAATACTTTTGTTGCAAATGCAAGGGATCAATTaGGAGTTACCTGGTATCACGATTTCAGACAAAAAT +
Preference number: 4 (lower is better)
Translates to: NTILLLQMQGIN*ELPGITISDKN
Trigger: ATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATTGTGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 90 bp TGGTGGGTTGGCCACTTCGACATCAACGGCGAGAGACTCCAAGTGTaGCAGGGCCGTCTCCATTGCCTGGGCCAGACGCTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: WWVGHFDINGERLQV*QGRLHCLGQTLFQS
Trigger: GCTCTGGAAGAGCGTCTGGCCCAGGCAATGGAGACGGCCCTGGCACACTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp CACTCCTGGCATCCTGGTCTTCAGCATACCTTGGCTCTGAGCTGCTaGCAGCCTCACCTCGGCCTCTTCTGGCTAGGCCCTCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: HSWHPGLQHTLALSC*QPHLGLFWLGPRHE
Trigger: CTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCTGAAGACCAGGATGCCAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp CAGCATCCCGCCACCTGGAATAATCCTCACTCTCAACAGCCAGGCTaGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGACGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: QHPATWNNPHSQQPG*LPSSRCHPSDDVCW
Trigger: CCAGCACACGTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTGGCGGGATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113797.4
CDS GCA 90 bp CCAGGCTGGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGACGTGTaGTGGCAAATGGTGACCGGCTCCTCTTGCTTTGATTGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: PGWLPSSRCHPSDDV*WQMVTGSSCFDWQL
Trigger: CAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACGTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 90 bp GTTCACTCCTGGCATCCTGGTCTTCAGCATACCTTGGCTCTGAGCTaGTGGCAGCCTCACCTCGGCCTCTTCTGGCTAGGCCCTCGGCAT +
Preference number: 5 (lower is better)
Translates to: VHSWHPGLQHTLALS*WQPHLGLFWLGPRH
Trigger: ATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCTGAAGACCAGGATGCCAGGAGTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp GGCTGGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGACGTGTGCTaGCAAATGGTGACCGGCTCCTCTTGCTTTGATTGGCAGTTGATC +
Preference number: 5 (lower is better)
Translates to: GWLPSSRCHPSDDVC*QMVTGSSCFDWQLI
Trigger: GATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACGTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp GCCACCTGGAAGTACTGGAATAATCCTCACTCTCAACAGCCAGGCTaGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGACGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ATWKYWNNPHSQQPG*LPSSRCHPSDDVCW
Trigger: CCAGCACACGTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGTACTTCCAGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113790.8
CDS CCA 90 bp CTCTTGGAGGATACCTGGAATAATCCTCACTCTCAACAGCCAGGCTaGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGACGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LLEDTWNNPHSQQPG*LPSSRCHPSDDVCW
Trigger: CCAGCACACGTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 90 bp GGTGTATGCCCAGAAGTCAGGGTCTGCCATGGTTCGCCGCCGTCTTaGCACTTTGTCTGCCTTCGCTTGTTCACTCCTGGCATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GVCPEVRVCHGSPPS*HFVCLRLFTPGILV
Trigger: GACCAGGATGCCAGGAGTGAACAAGCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGGCATACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp CATGAGCCTCCTCAGCATCGGCAGCATCCCGCCACCTGGAAGTACTaGAATAATCCTCACTCTCAACAGCCAGGCTGGCTCCCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HEPPQHRQHPATWKY*NNPHSQQPGWLPSS
Trigger: AGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGTACTTCCAGGTGGCGGGATGCTGCCGATGCTGAGGAGGCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113790.8
CDS CCA 90 bp ATCCTCTTCGGCTCCCCGAGGCCCTGTACTCTCTTGGAGGATACCTaGAATAATCCTCACTCTCAACAGCCAGGCTGGCTCCCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: ILFGSPRPCTLLEDT*NNPHSQQPGWLPSS
Trigger: AGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAGAGTACAGGGCCTCGGGGAGCCGAAGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 90 bp GGATCTCAGGAAGGGCATCAATGCTCTCCTTGCTTGCTGGTGGGTTaGCCACTTCGACATCAACGGCGAGAGACTCCAAGTGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GSQEGHQCSPCLLVG*PLRHQRRETPSVPG
Trigger: CCCTGGCACACTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp ACATGCAGCGGCACACTGGGCAGGTGCCAGACTTCTGAAGCCAGATaGACACGCAGGGCTTGTGGAAATAGTGGTGGCATGGTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: TCSGTLGRCQTSEAR*TRRACGNSGGMVAQ
Trigger: CTGAGCTACCATGCCACCACTATTTCCACAAGCCCTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCCGCTGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 90 bp CTTCGAGAGCTCAGCTCTGCGAGCCGAGCACCTCGCTGCAGGGGGTaGTTCTACCTTGCCACACTCTTCCTTCGCATCATGGTTAACACT +
Preference number: 5 (lower is better)
Translates to: LRELSSASRAPRCRG*FYLATLFLRIMVNT
Trigger: AGTGTTAACCATGATGCGAAGGAAGAGTGTGGCAAGGTAGAATCACCCCCTGCAGCGAGGTGCTCGGCTCGCAGAGCTGAGCTCTCGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 90 bp GAAGTCAGGGTCTGCCATGGTTCGCCGCCGTCTTGGCACTTTGTCTaGCTTCGCTTGTTCACTCCTGGCATCCTGGTCTTCAGCATACCT +
Preference number: 5 (lower is better)
Translates to: EVRVCHGSPPSWHFV*LRLFTPGILVFSIP
Trigger: AGGTATGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 90 bp CCTGAAGAGATGGGTCTTGTACTTCTTCAGGATAACCACTGCCATTaGTGCCAGCACTGGCGAGGCTCCCAGCTCCGGCTTGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: PEEMGLVLLQDNHCH*CQHWRGSQLRLADV
Trigger: AACGTCAGCAAGCCGGAGCTGGGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 90 bp CTTCCTCCTGAAGAGATGGGTCTTGTACTTCTTCAGGATAACCACTaGCATTGCTGCCAGCACTGGCGAGGCTCCCAGCTCCGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LPPEEMGLVLLQDNH*HCCQHWRGSQLRLA
Trigger: AGCAAGCCGGAGCTGGGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAGGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp CACATTCCGGACTTTGGGTCTCACCACCGGTTCCTCGGCACTCTTTaGGGTGTTTTCCCCACCACCACAAATACTCACAGGAGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: HIPDFGSHHRFLGTL*GVFPTTTNTHRSPA
Trigger: AGCAGGGCTCCTGTGAGTATTTGTGGTGGTGGGGAAAACACCCCAAAGAGTGCCGAGGAACCGGTGGTGAGACCCAAAGTCCGGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 90 bp GACCAGGATCTCAGGAAGGGCATCAATGCTCTCCTTGCTTGCTGGTaGGTTGGCCACTTCGACATCAACGGCGAGAGACTCCAAGTGTGC +
Preference number: 5 (lower is better)
Translates to: DQDLRKGINALLACW*VGHFDINGERLQVC
Trigger: GCACACTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATCCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp GGTGACCAGGATCTCAGGAAGGGCATCAATGCTCTCCTTGCTTGCTaGTGGGTTGGCCACTTCGACATCAACGGCGAGAGACTCCAAGTG +
Preference number: 5 (lower is better)
Translates to: GDQDLRKGINALLAC*WVGHFDINGERLQV
Trigger: CACTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATCCTGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 90 bp CAGCGACGACGTGTGCTGGCAAATGGTGACCGGCTCCTCTTGCTTTaGTTGGCAGTTGATCTGTGCATTGGGACTTCGGCTGTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: QRRRVLANGDRLLLL*LAVDLCIGTSAVVL
Trigger: GAGGACAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACGTCGTCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 90 bp TCGCTGCAGCAGATAGGACAGCACATTTCCTGGCCCACTGCACCATaGTCTTCGGTGACCAGGATCTCAGGAAGGGCATCAATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLQQIGQHISWPTAP*SSVTRISGRASMLS
Trigger: GGAGAGCATTGATGCCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATGTGCTGTCCTATCTGCTGCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 90 bp CATCCCAGCGACGACGTGTGCTGGCAAATGGTGACCGGCTCCTCTTaGTTTGATTGGCAGTTGATCTGTGCATTGGGACTTCGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: HPSDDVCWQMVTGSS*FDWQLICALGLRLL
Trigger: CAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACGTCGTCGCTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 90 bp GTAGTATCGGTAGTAATCGTCGGTGTATGCCCAGAAGTCAGGGTCTaGCATGGTTCGCCGCCGTCTTGGCACTTTGTCTGCCTTCGCTTG +
Preference number: 5 (lower is better)
Translates to: VVSVVIVGVCPEVRV*HGSPPSWHFVCLRL
Trigger: CAAGCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGGCATACACCGACGATTACTACCGATACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 90 bp GCTGTCAGAATCTTCCTCGTAGTATCGGTAGTAATCGTCGGTGTATaGCCAGAAGTCAGGGTCTGCCATGGTTCGCCGCCGTCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: AVRIFLVVSVVIVGV*PEVRVCHGSPPSWH
Trigger: GTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGGCATACACCGACGATTACTACCGATACTACGAGGAAGATTCTGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 90 bp TTCGGTGACCAGGATCTCAGGAAGGGCATCAATGCTCTCCTTGCTTaGTGGTGGGTTGGCCACTTCGACATCAACGGCGAGAGACTCCAA +
Preference number: 5 (lower is better)
Translates to: FGDQDLRKGINALLA*WWVGHFDINGERLQ
Trigger: TTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATCCTGGTCACCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp TCCATAAGCCAATCCTCTTCGGCTCCCCGAGGCCCTGTACTCTCTTaGAGGATACCTGGAATAATCCTCACTCTCAACAGCCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SISQSSSAPRGPVLS*RIPGIILTLNSQAG
Trigger: GCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAGAGTACAGGGCCTCGGGGAGCCGAAGAGGATTGGCTTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 90 bp ATCGGTAGTAATCGTCGGTGTATGCCCAGAAGTCAGGGTCTGCCATaGTTCGCCGCCGTCTTGGCACTTTGTCTGCCTTCGCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: IGSNRRCMPRSQGLP*FAAVLALCLPSLVH
Trigger: GTGAACAAGCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGGCATACACCGACGATTACTACCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp GACGACGTGTGCTGGCAAATGGTGACCGGCTCCTCTTGCTTTGATTaGCAGTTGATCTGTGCATTGGGACTTCGGCTGTTGTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DDVCWQMVTGSSCFD*QLICALGLRLLSSS
Trigger: AGAGGAGGACAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACGTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 90 bp GCTGCAGGGGGTGATTCTACCTTGCCACACTCTTCCTTCGCATCATaGTTAACACTAGTAAAGCGGGAAGACCTTGCCCCCTTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: AAGGDSTLPHSSFAS*LTLVKREDLAPFSG
Trigger: TCCCGAGAAGGGGGCAAGGTCTTCCCGCTTTACTAGTGTTAACCATGATGCGAAGGAAGAGTGTGGCAAGGTAGAATCACCCCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 90 bp ACACTTTGGGTTTCATGCAGTTTGGAGTCGCCACATTCCGGACTTTaGGTCTCACCACCGGTTCCTCGGCACTCTTTGGGGTGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: TLWVSCSLESPHSGL*VSPPVPRHSLGCFP
Trigger: GGGAAAACACCCCAAAGAGTGCCGAGGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGGCGACTCCAAACTGCATGAAACCCAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 90 bp CCACAAATACTCACAGGAGCCCTGCTAGGACGAGCTGGTAAATTCTaGCTCTCCCTCTCCAAGCTGTTGTTACCTTTTGCAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: PQILTGALLGRAGKF*LSLSKLLLPFAAAL
Trigger: CAGGGCAGCTGCAAAAGGTAACAACAGCTTGGAGAGGGAGAGGCAGAATTTACCAGCTCGTCCTAGCAGGGCTCCTGTGAGTATTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 90 bp GGCCCTCGGCATGAGCCTCCTCAGCATCGGCAGCATCCCGCCACCTaGAAGTACTGTGTGGTACATCATCATCATCATCAGTATCAAAAA +
Preference number: 5 (lower is better)
Translates to: GPRHEPPQHRQHPAT*KYCVVHHHHHQYQK
Trigger: TTTTTGATACTGATGATGATGATGATGTACCACACAGTACTTCCAGGTGGCGGGATGCTGCCGATGCTGAGGAGGCTCATGCCGAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 90 bp CACATATTCGCTGCAGCAGATAGGACAGCACATTTCCTGGCCCACTaGACCATGATCTTCGGTGACCAGGATCTCAGGAAGGGCATCAAT +
Preference number: 5 (lower is better)
Translates to: HIFAAADRTAHFLAH*TMIFGDQDLRKGIN
Trigger: ATTGATGCCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATGTGCTGTCCTATCTGCTGCAGCGAATATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAACCAGGGCCGTCTCCATaGCCTGGGCCAGACGCTCTT +
Preference number: 5 (lower is better)
Translates to: VANARDQFGVTWYHDFRQPGPSP*PGPDAL
Trigger: AAGAGCGTCTGGCCCAGGCAATGGAGACGGCCCTGG...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 90 bp CTCTTCCTTCGCATCATGGTTAACACTAGTAAAGCGGGAAGACCTTaGCCCCTTCTCGGGATCATCCTTAAACTTGCCAGCTTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: LFLRIMVNTSKAGRP*PLLGIILKLASFPS
Trigger: AGAGGGAAAGCTGGCAAGTTTAAGGATGATCCCGAGAAGGGGGCAAGGTCTTCCCGCTTTACTAGTGTTAACCATGATGCGAAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 90 bp GATTTCTCCTTCTTCCAGAGAGGCCTGTTCTTCCTCCTGAAGAGATaGGTCTTGTACTTCTTCAGGATAACCACTGCCATTGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: DFSFFQRGLFFLLKR*VLYFFRITTAIAAS
Trigger: GCTGGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAGGAGGAAGAACAGGCCTCTCTGGAAGAAGGAGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAACCAGGGCCGTCTCCATaGCCTGGGCCAGACGCTCTT +
Preference number: 5 (lower is better)
Translates to: LQMQGINLELPGITISDKPGPSP*PGPDAL
Trigger: AAGAGCGTCTGGCCCAGGCAATGGAGACGGCCCTGG...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACCAGGGCCGTCTCCATaGCCTGGGCCAGACGCTCTT +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEPGPSP*PGPDAL
Trigger: AAGAGCGTCTGGCCCAGGCAATGGAGACGGCCCTGG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAGCCACATTCCGGACTTaGGGTCTCACCACCGGTTCC +
Preference number: 5 (lower is better)
Translates to: VANARDQFGVTWYHDFRQATFRT*GLTTGS
Trigger: GGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGGC...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAACCAGGGCCGTCTCCATaGCCTGGGCCAGACGCTCTT +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKPGPSP*PGPDAL
Trigger: AAGAGCGTCTGGCCCAGGCAATGGAGACGGCCCTGG...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAGCCACATTCCGGACTTaGGGTCTCACCACCGGTTCC +
Preference number: 5 (lower is better)
Translates to: LQMQGINLELPGITISDKATFRT*GLTTGS
Trigger: GGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGGC...TTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAGCATCAATGCTCTCCTaGCTTGCTGGTGGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTASMLS*LAGGLA
Trigger: GGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGC...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAGGCATGGTAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: CCKCKGSIWSYLVSRFQTGMVAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTACCATGCC...TGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATTGGGACTTCGGCTGTaGTCCTCCTCTGGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLELGLRL*SSSGWQ
Trigger: TTGCCAGCCAGAGGAGGACAACAGCCGAAGTCCCAA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGCCACATTCCGGACTTaGGGTCTCACCACCGGTTCC +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKATFRT*GLTTGS
Trigger: GGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGGC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGCATCAATGCTCTCCTaGCTTGCTGGTGGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEASMLS*LAGGLA
Trigger: GGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGGCATGGTAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEGMVAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTACCATGCC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTTTGGGACTTCGGCTGTaGTCCTCCTCTGGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFLGLRL*SSSGWQ
Trigger: TTGCCAGCCAGAGGAGGACAACAGCCGAAGTCCCAA...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAATTGGGACTTCGGCTGTaGTCCTCCTCTGGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKLGLRL*SSSGWQ
Trigger: TTGCCAGCCAGAGGAGGACAACAGCCGAAGTCCCAA...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCTTGGGACTTCGGCTGTaGTCCTCCTCTGGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: INLELPGITISDKNPNDALGLRL*SSSGWQ
Trigger: TTGCCAGCCAGAGGAGGACAACAGCCGAAGTCCCAA...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAGCTGTTGTTACCTTTaGCAGCTGCCCTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: VANARDQFGVTWYHDFRQSCCYL*QLPCLQ
Trigger: CTGAAGGCAGGGCAGCTGCAAAAGGTAACAACAGCT...TTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGCATCAATGCTCTCCTaGCTTGCTGGTGGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMASMLS*LAGGLA
Trigger: GGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCAGCATCAATGCTCTCCTaGCTTGCTGGTGGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPASMLS*LAGGLA
Trigger: GGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGC...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGGCATGGTAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKGMVAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTACCATGCC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGGCATGGTAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMGMVAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTACCATGCC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAGGCATGGTAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQGMVAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTACCATGCC...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACAGTTGATCTGTGCATaGGGACTTCGGCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEQLICA*GLRLLS
Trigger: GGACAACAGCCGAAGTCCCAATGCACAGATCAACTG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAAAGCTGTTGTTACCTTTaGCAGCTGCCCTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ARDQFGVTWYHDFRQKSKSCCYL*QLPCLQ
Trigger: CTGAAGGCAGGGCAGCTGCAAAAGGTAACAACAGCT...TTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAATTGCTTGCTGGTGGGTaGGCCACTTCGACATCAACG +
Preference number: 5 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQLLAGG*ATSTST
Trigger: CGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAA...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCTTGCTTGCTGGTGGGTaGGCCACTTCGACATCAACG +
Preference number: 5 (lower is better)
Translates to: INLELPGITISDKNPNDALLAGG*ATSTST
Trigger: CGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAA...GGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAATTGCTTGCTGGTGGGTaGGCCACTTCGACATCAACG +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKLLAGG*ATSTST
Trigger: CGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAA...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAAGCTGTTGTTACCTTTaGCAGCTGCCCTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKSCCYL*QLPCLQ
Trigger: CTGAAGGCAGGGCAGCTGCAAAAGGTAACAACAGCT...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGATTGCTTGCTGGTGGGTaGGCCACTTCGACATCAACG +
Preference number: 5 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRLLAGG*ATSTST
Trigger: CGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAA...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAGAGTCATCTTCCAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLEESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTGGAAGATGACTC...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATGCTTTGATTGGCAGTaGATCTGTGCATTGGGACTT +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLECFDWQ*ICALGL
Trigger: AAGTCCCAATGCACAGATCAACTGCCAATCAAAGCA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GCAAGGGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGCTTTGATTGGCAGTaGATCTGTGCATTGGGACTT +
Preference number: 5 (lower is better)
Translates to: ARDQFGVTWYHDFRQKSKCFDWQ*ICALGL
Trigger: AAGTCCCAATGCACAGATCAACTGCCAATCAAAGCA...TTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGGATCATCCTTAAACTaGCCAGCTTTCCCTCTCACT +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKGSSLN*PAFPLT
Trigger: AGTGAGAGGGAAAGCTGGCAAGTTTAAGGATGATCC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGGGATCATCCTTAAACTaGCCAGCTTTCCCTCTCACT +
Preference number: 5 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMGSSLN*PAFPLT
Trigger: AGTGAGAGGGAAAGCTGGCAAGTTTAAGGATGATCC...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCCAGGATCATCCTTAAACTaGCCAGCTTTCCCTCTCACT +
Preference number: 5 (lower is better)
Translates to: SIWSYLVSRFQTKIQMMPGSSLN*PAFPLT
Trigger: AGTGAGAGGGAAAGCTGGCAAGTTTAAGGATGATCC...TGGCATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAACTGAAGAGATGGGTCTaGTACTTCTTCAGGATAACC +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLELKRWV*YFFRIT
Trigger: GGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAG...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAATCATCTTCCAGGTTGTaGTTTCCATCCAGCATGAAC +
Preference number: 5 (lower is better)
Translates to: RETQSTEQVGFVSTFRLESSSRL*FPSSMN
Trigger: GTTCATGCTGGATGGAAACAACAACCTGGAAGATGA...TTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp CTACAGGTGAGAACACTGAAACACAATACTTTTGTTGCAAATGCAAGGGATCAATCATCTTCCAGGTTGTaGTTTCCATCCAGCATGAAC +
Preference number: 5 (lower is better)
Translates to: LQVRTLKHNTFVANARDQSSSRL*FPSSMN
Trigger: GTTCATGCTGGATGGAAACAACAACCTGGAAGATGA...TTGATCCCTTGCATTTGCAACAAAAGTATTGTGTTTCAGTGTTCTCACCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAAGAGTCATCTTCCAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTGGAAGATGACTC...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AATACTTTTGTTGCAAATGCAAGGGATCAATTTGGAGTTACCTGGTATCACGATGAGTCATCTTCCAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: NTFVANARDQFGVTWYHDESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTGGAAGATGACTC...ATCGTGATACCAGGTAACTCCAAATTGATCCCTTGCATTTGCAACAAAAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAAGAGTCATCTTCCAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTGGAAGATGACTC...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp AGAGACACAGTCTACAGAACAAGTGGGATTTGTTTCAACTTTCAGGTTAGAAAATGCTTTGATTGGCAGTaGATCTGTGCATTGGGACTT +
Preference number: 5 (lower is better)
Translates to: RDTVYRTSGICFNFQVRKCFDWQ*ICALGL
Trigger: AAGTCCCAATGCACAGATCAACTGCCAATCAAAGCA...TTTTCTAACCTGAAAGTTGAAACAAATCCCACTTGTTCTGTAGACTGTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTTGCTTTGATTGGCAGTaGATCTGTGCATTGGGACTT +
Preference number: 5 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFCFDWQ*ICALGL
Trigger: AAGTCCCAATGCACAGATCAACTGCCAATCAAAGCA...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp GGATCAATTTGGAGTTACCTGGTATCACGATTTCAGACAAAAATCCAAATGATGCTGAAGAGATGGGTCTaGTACTTCTTCAGGATAACC +
Preference number: 5 (lower is better)
Translates to: GSIWSYLVSRFQTKIQMMLKRWV*YFFRIT
Trigger: GGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAG...CATCATTTGGATTTTTGTCTGAAATCGTGATACCAGGTAACTCCAAATTGATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAACTGAAGAGATGGGTCTaGTACTTCTTCAGGATAACC +
Preference number: 5 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQLKRWV*YFFRIT
Trigger: GGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAG...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp TGTTTTCTCAAAGGTGATTTGTACTTGCTCACCCGTACACTTTGGATTCATTTTCTGAAGAGATGGGTCTaGTACTTCTTCAGGATAACC +
Preference number: 5 (lower is better)
Translates to: CFLKGDLYLLTRTLWIHFLKRWV*YFFRIT
Trigger: GGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAG...AAAATGAATCCAAAGTGTACGGGTGAGCAAGTACAAATCACCTTTGAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ATAAGCTTTTACACCACTGCAAATACAGGAACATTAACCCATGACATGCAACAATCATCTTCCAGGTTGTaGTTTCCATCCAGCATGAAC +
Preference number: 5 (lower is better)
Translates to: ISFYTTANTGTLTHDMQQSSSRL*FPSSMN
Trigger: GTTCATGCTGGATGGAAACAACAACCTGGAAGATGA...TTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGAGAGTCATCTTCCAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTGGAAGATGACTC...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS-3UTR CAA 90 bp ACGATTTCAGACAAAAATCCAAATGATGCCATTGTTCTGTGTCAAAGCAAAAGATCATCTTCCAGGTTGTaGTTTCCATCCAGCATGAAC +
Preference number: 5 (lower is better)
Translates to: TISDKNPNDAIVLCQSKRSSSRL*FPSSMN
Trigger: GTTCATGCTGGATGGAAACAACAACCTGGAAGATGA...TCTTTTGCTTTGACACAGAACAATGGCATCATTTGGATTTTTGTCTGAAATCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS TCA 72 bp GCCTCACCTCGGCCTCTTCTGGCTAGGCCCTCGGCATaGGCCTCCTCAGCATCGGCAGCATCCCGCCACCTG +
Preference number: 6 (lower is better)
Translates to: ASPRPLLARPSA*ASSASAASRHL
Trigger: CAGGTGGCGGGATGCTGCCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GCTCTGAGCTGCTGGCAGCCTCACCTCGGCCTCTTCTaGCTAGGCCCTCGGCATGAGCCTCCTCAGCATCGG +
Preference number: 6 (lower is better)
Translates to: ALSCWQPHLGLF*LGPRHEPPQHR
Trigger: CCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGCCAGAAGAGGCCGAGGTGAGGCTGCCAGCAGCTCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp GCGGGGGAGGGAACATGCAGCGGCACACTGGGCAGGTaGCAGACTTCTGAAGCCAGATGGACACGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: AGEGTCSGTLGR*QTSEARWTRRA
Trigger: AGCCCTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCCGCTGCATGTTCCCTCCCCCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp AGAAGCTCCCAGCTTTCTCCGCTGGAGGACTGGGGTTaGTCTCGGCTTCGGTACTTCCTGCGCAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RSSQLSPLEDWG*SRLRYFLRRAA
Trigger: GGCTGCCCTGCGCAGGAAGTACCGAAGCCGAGAGCAACCCCAGTCCTCCAGCGGAGAAAGCTGGGAGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp GGCCACTTCGACATCAACGGCGAGAGACTCCAAGTGTaGCAGGGCCGTCTCCATTGCCTGGGCCAGACGCTC +
Preference number: 6 (lower is better)
Translates to: GHFDINGERLQV*QGRLHCLGQTL
Trigger: GAGCGTCTGGCCCAGGCAATGGAGACGGCCCTGGCACACTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 72 bp CTGCCAGCACTGGCGAGGCTCCCAGCTCCGGCTTGCTaGCGTTCCAGTTCTTCCTTTCCTGGCAGAAGCTCC +
Preference number: 6 (lower is better)
Translates to: LPALARLPAPAC*RSSSSFPGRSS
Trigger: GGAGCTTCTGCCAGGAAAGGAAGAACTGGAACGTCAGCAAGCCGGAGCTGGGAGCCTCGCCAGTGCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 90 bp ACCACTGCCATTGCTGCCAGCACTGGCGAGGCTCCCAGCTCCGGCTaGCTGACGTTCCAGTTCTTCCTTTCCTGGCAGAAGCTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: TTAIAASTGEAPSSG*LTFQFFLSWQKLPA
Trigger: AGCTGGGAGCTTCTGCCAGGAAAGGAAGAACTGGAACGTCAGCAAGCCGGAGCTGGGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp TGGCATCCTGGTCTTCAGCATACCTTGGCTCTGAGCTaGTGGCAGCCTCACCTCGGCCTCTTCTGGCTAGGC +
Preference number: 6 (lower is better)
Translates to: WHPGLQHTLALS*WQPHLGLFWLG
Trigger: GCCTAGCCAGAAGAGGCCGAGGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCTGAAGACCAGGATGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp CATCCTGGTCTTCAGCATACCTTGGCTCTGAGCTGCTaGCAGCCTCACCTCGGCCTCTTCTGGCTAGGCCCT +
Preference number: 6 (lower is better)
Translates to: HPGLQHTLALSC*QPHLGLFWLGP
Trigger: AGGGCCTAGCCAGAAGAGGCCGAGGTGAGGCTGCCAGCAGCTCAGAGCCAAGGTATGCTGAAGACCAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GCCACCTGGAATAATCCTCACTCTCAACAGCCAGGCTaGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGAC +
Preference number: 6 (lower is better)
Translates to: ATWNNPHSQQPG*LPSSRCHPSDD
Trigger: GTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113797.4
CDS TCA 72 bp CTCAGCTCTGCGAGCCGAGCACCTCGCTGCAGGGGGTaGTTCTACCTTGCCACACTCTTCCTTCGCATCATG +
Preference number: 6 (lower is better)
Translates to: LSSASRAPRCRG*FYLATLFLRIM
Trigger: CATGATGCGAAGGAAGAGTGTGGCAAGGTAGAATCACCCCCTGCAGCGAGGTGCTCGGCTCGCAGAGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 72 bp CTCCCGAGCTCTCGCTGTCATCCCAGCGACGACGTGTaGTGGCAAATGGTGACCGGCTCCTCTTGCTTTGAT +
Preference number: 6 (lower is better)
Translates to: LPSSRCHPSDDV*WQMVTGSSCFD
Trigger: ATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACGTCGTCGCTGGGATGACAGCGAGAGCTCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GGGATCATCCTTAAACTTGCCAGCTTTCCCTCTCACTaGCAGTCGGTCAACAGGCCCAGCCCCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GIILKLASFPSH*QSVNRPSPLLL
Trigger: GAGGAGGAGGGGGCTGGGCCTGTTGACCGACTGCCAGTGAGAGGGAAAGCTGGCAAGTTTAAGGATGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 72 bp CCAGAAGTCAGGGTCTGCCATGGTTCGCCGCCGTCTTaGCACTTTGTCTGCCTTCGCTTGTTCACTCCTGGC +
Preference number: 6 (lower is better)
Translates to: PEVRVCHGSPPS*HFVCLRLFTPG
Trigger: GCCAGGAGTGAACAAGCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp CATGAGCCTCCTCAGCATCGGCAGCATCCCGCCACCTaGAATAATCCTCACTCTCAACAGCCAGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: HEPPQHRQHPAT*NNPHSQQPGWL
Trigger: GAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTGGCGGGATGCTGCCGATGCTGAGGAGGCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113797.4
CDS CAA 72 bp CCCAGAAGTCAGGGTCTGCCATGGTTCGCCGCCGTCTaGGCACTTTGTCTGCCTTCGCTTGTTCACTCCTGG +
Preference number: 6 (lower is better)
Translates to: PRSQGLPWFAAV*ALCLPSLVHSW
Trigger: CCAGGAGTGAACAAGCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 72 bp ATTGCTGCCAGCACTGGCGAGGCTCCCAGCTCCGGCTaGCTGACGTTCCAGTTCTTCCTTTCCTGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: IAASTGEAPSSG*LTFQFFLSWQK
Trigger: CTTCTGCCAGGAAAGGAAGAACTGGAACGTCAGCAAGCCGGAGCTGGGAGCCTCGCCAGTGCTGGCAGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 90 bp GCCCAGAAGTCAGGGTCTGCCATGGTTCGCCGCCGTCTTGGCACTTaGTCTGCCTTCGCTTGTTCACTCCTGGCATCCTGGTCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: AQKSGSAMVRRRLGT*SAFACSLLASWSSA
Trigger: TGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 90 bp GTAAAGCGGGAAGACCTTGCCCCCTTCTCGGGATCATCCTTAAACTaGCCAGCTTTCCCTCTCACTGGCAGTCGGTCAACAGGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: VKREDLAPFSGSSLN*PAFPLTGSRSTGPA
Trigger: GGCTGGGCCTGTTGACCGACTGCCAGTGAGAGGGAAAGCTGGCAAGTTTAAGGATGATCCCGAGAAGGGGGCAAGGTCTTCCCGCTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 72 bp GGTCTTGTACTTCTTCAGGATAACCACTGCCATTGCTaGCAGCACTGGCGAGGCTCCCAGCTCCGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: GLVLLQDNHCHC*QHWRGSQLRLA
Trigger: AGCAAGCCGGAGCTGGGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GATACCTGGAATAATCCTCACTCTCAACAGCCAGGCTaGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGAC +
Preference number: 6 (lower is better)
Translates to: DTWNNPHSQQPG*LPSSRCHPSDD
Trigger: GTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 72 bp GGCTCCCCGAGGCCCTGTACTCTCTTGGAGGATACCTaGAATAATCCTCACTCTCAACAGCCAGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: GSPRPCTLLEDT*NNPHSQQPGWL
Trigger: GAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAGAGTACAGGGCCTCGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 72 bp AATCGTCGGTGTATGCCCAGAAGTCAGGGTCTGCCATaGTTCGCCGCCGTCTTGGCACTTTGTCTGCCTTCG +
Preference number: 6 (lower is better)
Translates to: NRRCMPRSQGLP*FAAVLALCLPS
Trigger: CGAAGGCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGGCATACACCGACGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GGCACACTGGGCAGGTGCCAGACTTCTGAAGCCAGATaGACACGCAGGGCTTGTGGAAATAGTGGTGGCATG +
Preference number: 6 (lower is better)
Translates to: GTLGRCQTSEAR*TRRACGNSGGM
Trigger: CATGCCACCACTATTTCCACAAGCCCTGCGTGTCCATCTGGCTTCAGAAGTCTGGCACCTGCCCAGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp CCTCAGCATCGGCAGCATCCCGCCACCTGGAAGTACTaGAATAATCCTCACTCTCAACAGCCAGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PQHRQHPATWKY*NNPHSQQPGWL
Trigger: GAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGTACTTCCAGGTGGCGGGATGCTGCCGATGCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113790.8
CDS CAA 90 bp AGGATCTCAGGAAGGGCATCAATGCTCTCCTTGCTTGCTGGTGGGTaGGCCACTTCGACATCAACGGCGAGAGACTCCAAGTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RISGRASMLSLLAGG*ATSTSTARDSKCAR
Trigger: CCTGGCACACTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp GTAGTAATCGTCGGTGTATGCCCAGAAGTCAGGGTCTaGCATGGTTCGCCGCCGTCTTGGCACTTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: VVIVGVCPEVRV*HGSPPSWHFVC
Trigger: GCAGACAAAGTGCCAAGACGGCGGCGAACCATGGCAGACCCTGACTTCTGGGCATACACCGACGATTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp ATGGGTCTTGTACTTCTTCAGGATAACCACTGCCATTaGTGCCAGCACTGGCGAGGCTCCCAGCTCCGGCTT +
Preference number: 6 (lower is better)
Translates to: MGLVLLQDNHCH*CQHWRGSQLRL
Trigger: AAGCCGGAGCTGGGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp CAGGATCTCAGGAAGGGCATCAATGCTCTCCTTGCTTaGTGGTGGGTTGGCCACTTCGACATCAACGGCGAG +
Preference number: 6 (lower is better)
Translates to: QDLRKGINALLA*WWVGHFDINGE
Trigger: CTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp CTCAGGAAGGGCATCAATGCTCTCCTTGCTTGCTGGTaGGTTGGCCACTTCGACATCAACGGCGAGAGACTC +
Preference number: 6 (lower is better)
Translates to: LRKGINALLACW*VGHFDINGERL
Trigger: GAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp AAGTACTGGAATAATCCTCACTCTCAACAGCCAGGCTaGCTCCCGAGCTCTCGCTGTCATCCCAGCGACGAC +
Preference number: 6 (lower is better)
Translates to: KYWNNPHSQQPG*LPSSRCHPSDD
Trigger: GTCGTCGCTGGGATGACAGCGAGAGCTCGGGAGCCAGCCTGGCTGTTGAGAGTGAGGATTATTCCAGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113790.8
CDS CAA 72 bp GGAAGGGCATCAATGCTCTCCTTGCTTGCTGGTGGGTaGGCCACTTCGACATCAACGGCGAGAGACTCCAAG +
Preference number: 6 (lower is better)
Translates to: GRASMLSLLAGG*ATSTSTARDSK
Trigger: CTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 90 bp GTGTGCTGGCAAATGGTGACCGGCTCCTCTTGCTTTGATTGGCAGTaGATCTGTGCATTGGGACTTCGGCTGTTGTCCTCCTCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: VCWQMVTGSSCFDWQ*ICALGLRLLSSSGW
Trigger: CCAGCCAGAGGAGGACAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 72 bp CCTTTTGCAGCTGCCCTGCCTTCAGCAGAAGAAATCTaGGAGGCCGAGGAGCCATTCTGCTTCGAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: PFAAALPSAEEI*EAEEPFCFESS
Trigger: TGAGCTCTCGAAGCAGAATGGCTCCTCGGCCTCTCAGATTTCTTCTGCTGAAGGCAGGGCAGCTGCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 72 bp ATCTTCCTCGTAGTATCGGTAGTAATCGTCGGTGTATaGCCAGAAGTCAGGGTCTGCCATGGTTCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: IFLVVSVVIVGV*PEVRVCHGSPP
Trigger: CGGCGGCGAACCATGGCAGACCCTGACTTCTGGGCATACACCGACGATTACTACCGATACTACGAGGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp GAAGAGATGGGTCTTGTACTTCTTCAGGATAACCACTaGCATTGCTGCCAGCACTGGCGAGGCTCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: EEMGLVLLQDNH*HCCQHWRGSQL
Trigger: GAGCTGGGAGCCTCGCCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCATCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp GCTGCAGCAGATAGGACAGCACATTTCCTGGCCCACTaGACCATGATCTTCGGTGACCAGGATCTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: AAADRTAHFLAH*TMIFGDQDLRK
Trigger: CTTCCTGAGATCCTGGTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATGTGCTGTCCTATCTGCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GAAGGGCATCAATGCTCTCCTTGCTTGCTGGTGGGTTaGCCACTTCGACATCAACGGCGAGAGACTCCAAGT +
Preference number: 6 (lower is better)
Translates to: EGHQCSPCLLVG*PLRHQRRETPS
Trigger: ACTTGGAGTCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GATCTCAGGAAGGGCATCAATGCTCTCCTTGCTTGCTaGTGGGTTGGCCACTTCGACATCAACGGCGAGAGA +
Preference number: 6 (lower is better)
Translates to: DLRKGINALLAC*WVGHFDINGER
Trigger: TCTCTCGCCGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 72 bp GTGACCAGGATCTCAGGAAGGGCATCAATGCTCTCCTaGCTTGCTGGTGGGTTGGCCACTTCGACATCAACG +
Preference number: 6 (lower is better)
Translates to: VTRISGRASMLS*LAGGLATSTST
Trigger: CGTTGATGTCGAAGTGGCCAACCCACCAGCAAGCAAGGAGAGCATTGATGCCCTTCCTGAGATCCTGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 72 bp CGTGTGCTGGCAAATGGTGACCGGCTCCTCTTGCTTTaGTTGGCAGTTGATCTGTGCATTGGGACTTCGGCT +
Preference number: 6 (lower is better)
Translates to: RVLANGDRLLLL*LAVDLCIGTSA
Trigger: AGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 72 bp AGCACATTTCCTGGCCCACTGCACCATGATCTTCGGTaGCCAGGATCTCAGGAAGGGCATCAATGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: STFPGPLHHDLR*PGSQEGHQCSP
Trigger: AGGAGAGCATTGATGCCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS TCA 72 bp CAGATAGGACAGCACATTTCCTGGCCCACTGCACCATaGTCTTCGGTGACCAGGATCTCAGGAAGGGCATCA +
Preference number: 6 (lower is better)
Translates to: QIGQHISWPTAP*SSVTRISGRAS
Trigger: TGATGCCCTTCCTGAGATCCTGGTCACCGAAGATCATGGTGCAGTGGGCCAGGAAATGTGCTGTCCTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp CCTCTCCCTCTCCAAGCTGTTGTTACCTTTTGCAGCTaGCCTGCCTTCAGCAGAAGAAATCTGAGAGGCCGA +
Preference number: 6 (lower is better)
Translates to: PLPLQAVVTFCS*PAFSRRNLRGR
Trigger: TCGGCCTCTCAGATTTCTTCTGCTGAAGGCAGGGCAGCTGCAAAAGGTAACAACAGCTTGGAGAGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 72 bp CAATCCTCTTCGGCTCCCCGAGGCCCTGTACTCTCTTaGAGGATACCTGGAATAATCCTCACTCTCAACAGC +
Preference number: 6 (lower is better)
Translates to: QSSSAPRGPVLS*RIPGIILTLNS
Trigger: GCTGTTGAGAGTGAGGATTATTCCAGGTATCCTCCAAGAGAGTACAGGGCCTCGGGGAGCCGAAGAGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 72 bp CATGAGCCTCCTCAGCATCGGCAGCATCCCGCCACCTaGAAGTACTGTGTGGTACATCATCATCATCATCAG +
Preference number: 6 (lower is better)
Translates to: HEPPQHRQHPAT*KYCVVHHHHHQ
Trigger: CTGATGATGATGATGATGTACCACACAGTACTTCCAGGTGGCGGGATGCTGCCGATGCTGAGGAGGCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 72 bp ACTTTGTCTGCCTTCGCTTGTTCACTCCTGGCATCCTaGTCTTCAGCATACCTTGGCTCTGAGCTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: TLSAFACSLLAS*SSAYLGSELLA
Trigger: TGCCAGCAGCTCAGAGCCAAGGTATGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGAAGGCAGACAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp GTCTTGGCACTTTGTCTGCCTTCGCTTGTTCACTCCTaGCATCCTGGTCTTCAGCATACCTTGGCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: VLALCLPSLVHS*HPGLQHTLALS
Trigger: GCTCAGAGCCAAGGTATGCTGAAGACCAGGATGCCAGGAGTGAACAAGCGAAGGCAGACAAAGTGCCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 72 bp GGCTCCTCTTGCTTTGATTGGCAGTTGATCTGTGCATaGGGACTTCGGCTGTTGTCCTCCTCTGGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: GSSCFDWQLICA*GLRLLSSSGWQ
Trigger: TTGCCAGCCAGAGGAGGACAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 72 bp GAAGACCTTGCCCCCTTCTCGGGATCATCCTTAAACTaGCCAGCTTTCCCTCTCACTGGCAGTCGGTCAACA +
Preference number: 6 (lower is better)
Translates to: EDLAPFSGSSLN*PAFPLTGSRST
Trigger: TGTTGACCGACTGCCAGTGAGAGGGAAAGCTGGCAAGTTTAAGGATGATCCCGAGAAGGGGGCAAGGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CAA 90 bp ATGGTGACCGGCTCCTCTTGCTTTGATTGGCAGTTGATCTGTGCATaGGGACTTCGGCTGTTGTCCTCCTCTGGCTGGCAATCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: MVTGSSCFDWQLICA*GLRLLSSSGWQSFP
Trigger: AGGAAAGGATTGCCAGCCAGAGGAGGACAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 90 bp GAGCTGGTAAATTCTGCCTCTCCCTCTCCAAGCTGTTGTTACCTTTaGCAGCTGCCCTGCCTTCAGCAGAAGAAATCTGAGAGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: ELVNSASPSPSCCYL*QLPCLQQKKSERPR
Trigger: CCTCGGCCTCTCAGATTTCTTCTGCTGAAGGCAGGGCAGCTGCAAAAGGTAACAACAGCTTGGAGAGGGAGAGGCAGAATTTACCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS GCA 72 bp GACGACGTGTGCTGGCAAATGGTGACCGGCTCCTCTTaGTTTGATTGGCAGTTGATCTGTGCATTGGGACTT +
Preference number: 6 (lower is better)
Translates to: DDVCWQMVTGSS*FDWQLICALGL
Trigger: AAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCACACGTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp TGCTGGCAAATGGTGACCGGCTCCTCTTGCTTTGATTaGCAGTTGATCTGTGCATTGGGACTTCGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: CWQMVTGSSCFD*QLICALGLRLL
Trigger: CAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 72 bp CAAATGGTGACCGGCTCCTCTTGCTTTGATTGGCAGTaGATCTGTGCATTGGGACTTCGGCTGTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: QMVTGSSCFDWQ*ICALGLRLLSS
Trigger: GGAGGACAACAGCCGAAGTCCCAATGCACAGATCAACTGCCAATCAAAGCAAGAGGAGCCGGTCACCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 90 bp TCCTTCTTCCAGAGAGGCCTGTTCTTCCTCCTGAAGAGATGGGTCTaGTACTTCTTCAGGATAACCACTGCCATTGCTGCCAGCACTGGC +
Preference number: 6 (lower is better)
Translates to: SFFQRGLFFLLKRWV*YFFRITTAIAASTG
Trigger: GCCAGTGCTGGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAGGAGGAAGAACAGGCCTCTCTGGAAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS GCA 72 bp CGCATCATGGTTAACACTAGTAAAGCGGGAAGACCTTaGCCCCTTCTCGGGATCATCCTTAAACTTGCCAGC +
Preference number: 6 (lower is better)
Translates to: RIMVNTSKAGRP*PLLGIILKLAS
Trigger: GCTGGCAAGTTTAAGGATGATCCCGAGAAGGGGGCAAGGTCTTCCCGCTTTACTAGTGTTAACCATGATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036354.7
ENSMUST00000113792.2
ENSMUST00000167246.2
CDS CCA 72 bp CCATCCAGCATGAACATCCCAGGCTGTATGAGCTCATaGGTAGACTCATTATCACCCTCGCTGCTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: PSSMNIPGCMSS*VDSLSPSLLLS
Trigger: TGAAAGCAGCAGCGAGGGTGATAATGAGTCTACCCATGAGCTCATACAGCCTGGGATGTTCATGCTGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CAA 72 bp CAGAGAGGCCTGTTCTTCCTCCTGAAGAGATGGGTCTaGTACTTCTTCAGGATAACCACTGCCATTGCTGCC +
Preference number: 6 (lower is better)
Translates to: QRGLFFLLKRWV*YFFRITTAIAA
Trigger: GGCAGCAATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAGGAGGAAGAACAGGCCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2
CDS CCA 72 bp TTCTTCCAGAGAGGCCTGTTCTTCCTCCTGAAGAGATaGGTCTTGTACTTCTTCAGGATAACCACTGCCATT +
Preference number: 6 (lower is better)
Translates to: FFQRGLFFLLKR*VLYFFRITTAI
Trigger: AATGGCAGTGGTTATCCTGAAGAAGTACAAGACCCATCTCTTCAGGAGGAAGAACAGGCCTCTCTGGAAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036354.7
ENSMUST00000113790.8
ENSMUST00000113792.2
ENSMUST00000113797.4
ENSMUST00000167246.2