Pregenerated sensors for PIWIL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036912Ensembl transcript IDs: ENSMUST00000076946.4, ENSMUST00000115644.10, ENSMUST00000136399.8
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGCCGGCTTGTTCTTGGCCGGTGTGCACTGGGTCAAATCGGTGTaGCAAGCACAGGTTAATATGAGCAACAGAACCCTGACATTTGAC | + |
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Preference number: 1 (lower is better) Translates to: AAGLFLAGVHWVKSV*QAQVNMSNRTLTFD Trigger: GTCAAATGTCAGGGTTCTGTTGCTCATATTAACCTGTGCTTGGCACACCGATTTGACCCAGTGCACACCGGCCAAGAACAAGCCGGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CCA 90 bp | ACCCTTCCAGAAACAGCGGCCGGCTTGTTCTTGGCCGGTGTGCACTaGGTCAAATCGGTGTGCCAAGCACAGGTTAATATGAGCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: TLPETAAGLFLAGVH*VKSVCQAQVNMSNR Trigger: TCTGTTGCTCATATTAACCTGTGCTTGGCACACCGATTTGACCCAGTGCACACCGGCCAAGAACAAGCCGGCCGCTGTTTCTGGAAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CCA 90 bp | ACAAACATCTGTAATTCCAGTTCCAGGAAATCCAATGTCCTCTTCTaGCCTCTGTGGGCATTGCACACACATGGTGCACAGATGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: TNICNSSSRKSNVLF*PLWALHTHGAQMYV Trigger: CACATACATCTGTGCACCATGTGTGTGCAATGCCCACAGAGGCCAGAAGAGGACATTGGATTTCCTGGAACTGGAATTACAGATGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR TCA 90 bp | GATAACAAAGTTTACAAAACTACATGTGCAGTATACCTAAGGGAGTaGAGTCCAAGTGTTGACCATGTTCACTGGCTAATACCAATGTTG | + |
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Preference number: 1 (lower is better) Translates to: DNKVYKTTCAVYLRE*SPSVDHVHWLIPML Trigger: CAACATTGGTATTAGCCAGTGAACATGGTCAACACTTGGACTTCACTCCCTTAGGTATACTGCACATGTAGTTTTGTAAACTTTGTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCCGGGACCAAGGTTCAGTTCCCACCACCTACACAGCAGCTCACAAACATAGGTGGAAGAGAGCCTaGGCAAGCACCCAGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: FARDQGSVPTTYTAAHKHRWKRA*ASTQLP Trigger: TGGCAGCTGGGTGCTTGCCCAGGCTCTCTTCCACCT...ATGTTTGTGAGCTGCTGTGTAGGTGGTGGGAACTGAACCTTGGTCCCGGGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CAA 90 bp | TTAGAAATGAGTCTTCTCTTCACCCTTCCAGAAACAGCGGCCGGCTaGTTCTTGGCCGGTGTGCACTGGGTCAAATCGGTGTGCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LEMSLLFTLPETAAG*FLAGVHWVKSVCQA Trigger: TGCTTGGCACACCGATTTGACCCAGTGCACACCGGCCAAGAACAAGCCGGCCGCTGTTTCTGGAAGGGTGAAGAGAAGACTCATTTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGGACCAAGGTTCAGTTCCCACCACCTACACAGCAGCTCACAAACATCTGTAACAGCCTCTGTTCTGTaGCACATGGAAGGAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: PGPRFSSHHLHSSSQTSVTASVL*HMEGAT Trigger: TGTGGCTCCTTCCATGTGGCACAGAACAGAGGCTGT...TACAGATGTTTGTGAGCTGCTGTGTAGGTGGTGGGAACTGAACCTTGGTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | CCGGGACCAAGGTTCAGTTCCCACCACCTACACAGCAGCTCACAAACATCTGTATCCAATGTCCTCTTCTaGCCTCTGTGGGCATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: PGPRFSSHHLHSSSQTSVSNVLF*PLWALH Trigger: GTGCAATGCCCACAGAGGCCAGAAGAGGACATTGGA...TACAGATGTTTGTGAGCTGCTGTGTAGGTGGTGGGAACTGAACCTTGGTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR GCA 90 bp | ACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTAGGGAGAAGCTGGTGTTCTTGGCCGGTGTaGACTGGGTCAAATCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: TIVPSWEHSTCGILGRSWCSWPV*TGSNRC Trigger: ACACCGATTTGACCCAGTGCACACCGGCCAAGAACA...CCAGCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCCGGGACCAAGGTTCAGTTCCCACCACCTACACAGCAGCTCACAAACATGTGAAGTCCAAGTGTTaGCCATGTTCACTGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: FARDQGSVPTTYTAAHKHVKSKC*PCSLAN Trigger: ATTAGCCAGTGAACATGGTCAACACTTGGACTTCAC...ATGTTTGTGAGCTGCTGTGTAGGTGGTGGGAACTGAACCTTGGTCCCGGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCCGGGACCAAGGTTCAGTTCCCACCACCTACACAGCAGCTCACAAACATATTGCACACACATGGTaGACAGATGTATGTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FARDQGSVPTTYTAAHKHIAHTW*TDVCAG Trigger: ACCTGCACATACATCTGTGCACCATGTGTGTGCAAT...ATGTTTGTGAGCTGCTGTGTAGGTGGTGGGAACTGAACCTTGGTCCCGGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | ATATGCAAATTCTACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTGGCGGAGTCTTCCGCTaGGAAGAAATGGTCCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: ICKFYHSTILGAQYLWHFGGVFR*EEMVRV Trigger: GACTCGGACCATTTCTTCCCAGCGGAAGACTCCGCC...AAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAATTTGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGCACAGTACCTGTGGCATTTTAGGGAGAAGCTGGCAATGTATATTAACAAGGGAATCAATGGGGTaGGGCCATAGGAAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WEHSTCGILGRSWQCILTRESMG*GHRKKR Trigger: CCTCTTCTTCCTATGGCCCCACCCCATTGATTCCCT...TGTTAATATACATTGCCAGCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTAGGGAGAAGCTGGCCATCCCAAATCACATaGAGAGAAAAACTGTATGCC | + |
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Preference number: 2 (lower is better) Translates to: TIVPSWEHSTCGILGRSWPSQIT*REKLYA Trigger: GGCATACAGTTTTTCTCTCCATGTGATTTGGGATGG...CCAGCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTAGGGAGAAGCTGGACATATGAGAATAGCTaGAGCCATGACTCAGGACTT | + |
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Preference number: 2 (lower is better) Translates to: TIVPSWEHSTCGILGRSWTYENS*SHDSGL Trigger: AAGTCCTGAGTCATGGCTCCAGCTATTCTCATATGT...CCAGCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | ACACATGAAAGTAATGCCAGTAACAAAAGCCATCCTTTTTGGCTTGGTGGAATAGGCATTGCACACACATaGTGCACAGATGTATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: THESNASNKSHPFWLGGIGIAHT*CTDVCA Trigger: TGCACATACATCTGTGCACCATGTGTGTGCAATGCC...TATTCCACCAAGCCAAAAAGGATGGCTTTTGTTACTGGCATTACTTTCATGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CAA 90 bp | AAACACATGAAAGTAATGCCAGTAACAAAAGCCATCCTTTTTGGCTaGGTGGAATATGCAAATTCTACCATAGTACCATCCTGGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KHMKVMPVTKAILFG*VEYANSTIVPSWEH Trigger: GTGCTCCCAGGATGGTACTATGGTAGAATTTGCATATTCCACCAAGCCAAAAAGGATGGCTTTTGTTACTGGCATTACTTTCATGTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR GCA 90 bp | ATATGCAAATTCTACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTGAGAGAAAAACTGTATaGCATGTTCCCATAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: ICKFYHSTILGAQYLWHFERKTV*HVPIAR Trigger: TCTTGCTATGGGAACATGGCATACAGTTTTTCTCTC...AAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAATTTGCATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCCATCCCAAATCACATGGAGAGAAAAACTGTATGCCATGTTCCCATAGCATTAGTCACTAAAACATaGCTACGGAAAATCTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: EAIPNHMERKTVCHVPIALVTKT*LRKICN Trigger: ATTGCAGATTTTCCGTAGGCATGTTTTAGTGACTAA...TGCTATGGGAACATGGCATACAGTTTTTCTCTCCATGTGATTTGGGATGGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACAAACCCATCACTCTGTaGGTTCTGTTTGTTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHKPITL*VLFVCL Trigger: AAGACAAACAAACAGAACCCACAGAGTGATGGGTTT...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR-3UTR CCA 90 bp | AATAAACACATGAAAGTAATGCCAGTAACAAAAGCCATCCTTTTTGGCTTGGTGGCAGTTAGAAGGTTATaGCATCCCATGGTAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: NKHMKVMPVTKAILFGLVAVRRL*HPMVEC Trigger: ACATTCTACCATGGGATGCCATAACCTTCTAACTGC...CACCAAGCCAAAAAGGATGGCTTTTGTTACTGGCATTACTTTCATGTGTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR TCA 72 bp | CCCGTAAGCCGCAGGAGCCTGAGCGGTAGGCAGATCTaGACAACGCAGAGCCACTGCTTTCGGAGTCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: PVSRRSLSGRQI*TTQSHCFRSLK Trigger: CTTGAGACTCCGAAAGCAGTGGCTCTGCGTTGTTCAGATCTGCCTACCGCTCAGGCTCCTGCGGCTTACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR CCA 72 bp | GAGTACTCAAGGCCGCGAGATGGCGGAGTCTTCCGCTaGGAAGAAATGGTCCGAGTCTACAGCCTCTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: EYSRPRDGGVFR*EEMVRVYSLCS Trigger: AGAACAGAGGCTGTAGACTCGGACCATTTCTTCCCAGCGGAAGACTCCGCCATCTCGCGGCCTTGAGTACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR GCA 72 bp | AGCCATGACTCAGGACTTGAGAGCTCTGGCTACTTTTaGCCGGGACCAAGGTTCAGTTCCCACCACCTACAC | + |
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Preference number: 3 (lower is better) Translates to: SHDSGLESSGYF*PGPRFSSHHLH Trigger: GTGTAGGTGGTGGGAACTGAACCTTGGTCCCGGGCAAAAGTAGCCAGAGCTCTCAAGTCCTGAGTCATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CAA 90 bp | ACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTAGGGAGAAGCTGGTGGCCTCTGTGGGCATaGCACACACATGGTGCACAG | + |
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Preference number: 3 (lower is better) Translates to: TIVPSWEHSTCGILGRSWWPLWA*HTHGAQ Trigger: CTGTGCACCATGTGTGTGCAATGCCCACAGAGGCCA...CCAGCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CAA 90 bp | ATATGCAAATTCTACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTGCGGCCGGCTTGTTCTaGGCCGGTGTGCACTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ICKFYHSTILGAQYLWHFAAGLF*AGVHWV Trigger: GACCCAGTGCACACCGGCCAAGAACAAGCCGGCCGC...AAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAATTTGCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CCA 72 bp | ACAGGAAGACAGAAACATGTCAGGGAATCAATGGGGTaGGGCCATAGGAAGAAGAGGTGGAAGAGAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: TGRQKHVRESMG*GHRKKRWKRAW Trigger: CCAGGCTCTCTTCCACCTCTTCTTCCTATGGCCCCACCCCATTGATTCCCTGACATGTTTCTGTCTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR GCA 72 bp | TTGTTCTTGGCCGGTGTGCACTGGGTCAAATCGGTGTaGCAAGCACAGGTTAATATGAGCAACAGAACCCTG | + |
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Preference number: 3 (lower is better) Translates to: LFLAGVHWVKSV*QAQVNMSNRTL Trigger: CAGGGTTCTGTTGCTCATATTAACCTGTGCTTGGCACACCGATTTGACCCAGTGCACACCGGCCAAGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CAA 90 bp | ACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTAGGGAGAAGCTGGAGTCACGATGTCGCTTaGTCATCTTCATTCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: TIVPSWEHSTCGILGRSWSHDVA*SSSFLP Trigger: TGGGAGGAATGAAGATGACAAAGCGACATCGTGACT...CCAGCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR GCA 72 bp | CCTCTTCTGGCCTCTGTGGGCATTGCACACACATGGTaGACAGATGTATGTGCAGGTAAGACAAATCACACA | + |
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Preference number: 3 (lower is better) Translates to: PLLASVGIAHTW*TDVCAGKTNHT Trigger: TGTGTGATTTGTCTTACCTGCACATACATCTGTGCACCATGTGTGTGCAATGCCCACAGAGGCCAGAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CCA 72 bp | TGTCCTCTTCTGGCCTCTGTGGGCATTGCACACACATaGTGCACAGATGTATGTGCAGGTAAGACAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: CPLLASVGIAHT*CTDVCAGKTNH Trigger: GTGATTTGTCTTACCTGCACATACATCTGTGCACCATGTGTGTGCAATGCCCACAGAGGCCAGAAGAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CCA 72 bp | TGTAATTCCAGTTCCAGGAAATCCAATGTCCTCTTCTaGCCTCTGTGGGCATTGCACACACATGGTGCACAG | + |
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Preference number: 3 (lower is better) Translates to: CNSSSRKSNVLF*PLWALHTHGAQ Trigger: CTGTGCACCATGTGTGTGCAATGCCCACAGAGGCCAGAAGAGGACATTGGATTTCCTGGAACTGGAATTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CAA 90 bp | ATATGCAAATTCTACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTGCCATGACTCAGGACTaGAGAGCTCTGGCTACTTTT | + |
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Preference number: 3 (lower is better) Translates to: ICKFYHSTILGAQYLWHFAMTQD*RALATF Trigger: AAAAGTAGCCAGAGCTCTCAAGTCCTGAGTCATGGC...AAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAATTTGCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR TCA 72 bp | ATGTGCAGTATACCTAAGGGAGTGAAGTCCAAGTGTTaGCCATGTTCACTGGCTAATACCAATGTTGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: MCSIPKGVKSKC*PCSLANTNVGD Trigger: GTCCCCAACATTGGTATTAGCCAGTGAACATGGTCAACACTTGGACTTCACTCCCTTAGGTATACTGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CCA 72 bp | TTGGTGGAATATGCAAATTCTACCATAGTACCATCCTaGGAGCACAGTACCTGTGGCATTTTAGGGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LVEYANSTIVPS*EHSTCGILGRS Trigger: GCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAATTTGCATATTCCACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR-3UTR CAA 90 bp | ATATGCAAATTCTACCATAGTACCATCCTGGGAGCACAGTACCTGTGGCATTTTGCATCACAAAGAGAATaGGGTCTCCCAAGCAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: ICKFYHSTILGAQYLWHFASQRE*GLPSSR Trigger: TCTACTGCTTGGGAGACCCAATTCTCTTTGTGATGC...AAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAATTTGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CCA 72 bp | TTCTACCATAGTACCATCCTGGGAGCACAGTACCTGTaGCATTTTAGGGAGAAGCTGGCAATGTATATTAAC | + |
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Preference number: 3 (lower is better) Translates to: FYHSTILGAQYL*HFREKLAMYIN Trigger: GTTAATATACATTGCCAGCTTCTCCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR GCA 72 bp | AGTAACAAAAGCCATCCTTTTTGGCTTGGTGGAATATaGAAATTCTACCATAGTACCATCCTGGGAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: SNKSHPFWLGGI*KFYHSTILGAQ Trigger: CTGTGCTCCCAGGATGGTACTATGGTAGAATTTGCATATTCCACCAAGCCAAAAAGGATGGCTTTTGTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR TCA 72 bp | AAGAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATaGCACATGACAAAGCCACAAGAAAACCCATCACTC | + |
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Preference number: 3 (lower is better) Translates to: KRNTRLNQAKVK*HMTKPQENPSL Trigger: GAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR-3UTR CAA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACGTGGGTTCTGTTTGTTaGTCTTTGTTGGTTTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHVGSVC*SLLVLD Trigger: GTCTAAAACCAACAAAGACAAACAAACAGAACCCAC...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR-3UTR CAA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACCTCTGTGGGTTCTGTTaGTTTGTCTTTGTTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHLCGFC*FVFVGF Trigger: AAAACCAACAAAGACAAACAAACAGAACCCACAGAG...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR CCA 72 bp | CATGAAAGTAATGCCAGTAACAAAAGCCATCCTTTTTaGCTTGGTGGAATATGCAAATTCTACCATAGTACC | + |
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Preference number: 3 (lower is better) Translates to: HESNASNKSHPF*LGGICKFYHST Trigger: GGTACTATGGTAGAATTTGCATATTCCACCAAGCCAAAAAGGATGGCTTTTGTTACTGGCATTACTTTCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| CDS-3UTR GCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTCGGGCCAGCTGCTGCTaGCTTCCCACAGGACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGRASCC*LPTGLS Trigger: GCTCAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCG...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR CAA 72 bp | CTCTTCACCCTTCCAGAAACAGCGGCCGGCTTGTTCTaGGCCGGTGTGCACTGGGTCAAATCGGTGTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LFTLPETAAGLF*AGVHWVKSVCQ Trigger: TTGGCACACCGATTTGACCCAGTGCACACCGGCCAAGAACAAGCCGGCCGCTGTTTCTGGAAGGGTGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| CDS-3UTR CCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTTGCAGGTCATCTGCATaGCGATCTTGGTGGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGCRSSA*RSWWPH Trigger: GTGTGGCCACCAAGATCGCCATGCAGATGACCTGCA...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR CAA 72 bp | AGTCTTCTCTTCACCCTTCCAGAAACAGCGGCCGGCTaGTTCTTGGCCGGTGTGCACTGGGTCAAATCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLLFTLPETAAG*FLAGVHWVKSV Trigger: CACCGATTTGACCCAGTGCACACCGGCCAAGAACAAGCCGGCCGCTGTTTCTGGAAGGGTGAAGAGAAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| CDS-3UTR TCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTCATATGGCTGTGAAATaGCACTTGTCCCACCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGHMAVK*HLSHLR Trigger: CCGGAGGTGGGACAAGTGTCATTTCACAGCCATATG...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR GCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTCTCAGCATCGTTCCCTaGTTATTCAAGGTCCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGLSIVP*LFKVRV Trigger: GACCCGGACCTTGAATAAGCAGGGAACGATGCTGAG...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR GCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTGAAGGTCAGCTTGTGTaGATATTGGCATGGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGEGQLV*ILAWCG Trigger: CCCGCACCATGCCAATATGCACACAAGCTGACCTTC...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | CCGGGACCAAGGTTCAGTTCCCACCACCTACACAGCAGCTCACAAACATCTGTACGTGCCGGCAAGTCATaGTTGTGTCTGTACCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPRFSSHHLHSSSQTSVRAGKS*LCLYHR Trigger: CCGGTGGTACAGACACAACCATGACTTGCCGGCACG...TACAGATGTTTGTGAGCTGCTGTGTAGGTGGTGGGAACTGAACCTTGGTCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTCCAGTCAGCAGCAAATaGAGGTTGACATGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGPVSSK*RLTCVV Trigger: GACCACACATGTCAACCTGCATTTGCTGCTGACTGG...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTACAGCAACCCGAGCGTaGGTGGGCAGGGCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLTATRA*VGRARW Trigger: CCACCGGGCCCTGCCCACCCACGCTCGGGTTGCTGT...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTAGTTCTGTGACCTTCTaGTCCAGCTTTTCTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGSSVTF*SSFSER Trigger: CCTCTCAGAAAAGCTGGACCAGAAGGTCACAGAACT...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTAAGTTCATATGGCTGTaGAATGACACTTGTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGKFIWL*NDTCPT Trigger: GGTGGGACAAGTGTCATTTCACAGCCATATGAACTT...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGGAGCCGTCCCGCTTCTaGAAGGCCTGTGTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLEPSRF*KACVGF Trigger: GAAGCCCACACAGGCCTTTCAGAAGCGGGACGGCTC...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTCAGTCATGCAGACTTTaGGGCAATCTGCAATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGQSCRL*GNLQYQ Trigger: CTGATATTGCAGATTGCCTCAAAGTCTGCATGACTG...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR GCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTAGTCGGGCCAGCTGCTaGTGCCTTCCCACAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLSRASC*CLPTGL Trigger: CAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACT...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGCGGACGTGTTGCTTCTaGGTCCACAACAGTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLRTCCF*VHNSAE Trigger: CTCGGCACTGTTGTGGACTCAGAAGCAACACGTCCG...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGACGAGTCGGGCCAGCTaGTGCTGCCTTCCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSCDDISQVPHENLPQALTSRAS*CCLPTG Trigger: TCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGT...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACACGGGTCAGCACACACTaGCTTGGCACTGGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATRVSTH*LGTGQS Trigger: TGACTGCCCAGTGCCAAGCCAGTGTGTGCTGACCCG...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | GAAGCCATCCCAAATCACATGGAGAGAAAAACTGTATGCCATGTTCCCATAGCACACAACAGTGCCGAGTaGGGGGTTCTGCACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EAIPNHMERKTVCHVPIAHNSAE*GVLHSV Trigger: CACACTGTGCAGAACCCCCCACTCGGCACTGTTGTG...TGCTATGGGAACATGGCATACAGTTTTTCTCTCCATGTGATTTGGGATGGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
||
| 3UTR CAA 72 bp | AGGAAATCCAATGTCCTCTTCTGGCCTCTGTGGGCATaGCACACACATGGTGCACAGATGTATGTGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKSNVLFWPLWA*HTHGAQMYVQV Trigger: TACCTGCACATACATCTGTGCACCATGTGTGTGCAATGCCCACAGAGGCCAGAAGAGGACATTGGATTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CAA 72 bp | ATACATATGAGAATAGCTGGAGCCATGACTCAGGACTaGAGAGCTCTGGCTACTTTTGCCCGGGACCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHMRIAGAMTQD*RALATFARDQG Trigger: ACCTTGGTCCCGGGCAAAAGTAGCCAGAGCTCTCAAGTCCTGAGTCATGGCTCCAGCTATTCTCATATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGTCAGCCGCTGTTCTCTaGAGGACACAGCGGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLSAAVL*RTQREN Trigger: GTTTTCCCGCTGTGTCCTTCAGAGAACAGCGGCTGA...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTGTCCACTCATGTTCCTaGGTGCCAGCGGCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLVHSCS*VPAAFQ Trigger: CTGGAAAGCCGCTGGCACCCAGGAACATGAGTGGAC...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACACGTGCCGGCAAGTCATaGTTGTGTCTGTACCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATRAGKS*LCLYHR Trigger: CCGGTGGTACAGACACAACCATGACTTGCCGGCACG...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTGAGACGGTGTGGCTGTaGCTCGGAGTTTGGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLETVWL*LGVWEY Trigger: ATACTCCCAAACTCCGAGTCACAGCCACACCGTCTC...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGTGTGGCACATCTCGGTaGAGCAAGACATGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLCGTSR*SKTCQF Trigger: GAACTGGCATGTCTTGCTTCACCGAGATGTGCCACA...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGACTCATGTTCCTGGGTaGCAGCGGCTTTCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSCDDISQVPHENLPQALTHVPG*QRLSRA Trigger: AGCCCTGGAAAGCCGCTGGCACCCAGGAACATGAGT...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGAGTTTGCAGGTCATCTaGATGGCGATCTTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLSLQVI*MAILVA Trigger: GGCCACCAAGATCGCCATGCAGATGACCTGCAAACT...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGCAGCACACACTGGCTTaGCACTGGGCAGTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSCDDISQVPHENLPQALQHTLA*HWAVRA Trigger: AGCTCTGACTGCCCAGTGCCAAGCCAGTGTGTGCTG...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | GAAGCCATCCCAAATCACATGGAGAGAAAAACTGTATGCCATGTTCCCATAGCAGTCAGTCGCTGCATGTaGTCAGGCTTCAAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EAIPNHMERKTVCHVPIAVSRCM*SGFKAL Trigger: CAATGCCTTGAAGCCTGACCACATGCAGCGACTGAC...TGCTATGGGAACATGGCATACAGTTTTTCTCTCCATGTGATTTGGGATGGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| CDS-3UTR CCA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTGGTAGAAAAGATTATTaGCTAATTCCAGACTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGGRKDY*LIPDLV Trigger: AACCAAGTCTGGAATTAGCCAATAATCTTTTCTACC...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGGCCACTGGGTTCCTCTaGATGTCATCCACGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSCDDISQVPHENLPQALATGFL*MSSTSR Trigger: CCGACTCGTGGATGACATCCAGAGGAACCCAGTGGC...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGCACAACAGTGCCGAGTaGGGGGTTCTGCACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSCDDISQVPHENLPQALHNSAE*GVLHSV Trigger: CACACTGTGCAGAACCCCCCACTCGGCACTGTTGTG...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGCTGGTCCAGCTTTTCTaGGAGGAAAAGGCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSCDDISQVPHENLPQALLVQLF*EEKAGT Trigger: GGTGCCAGCCTTTTCCTCTCAGAAAAGCTGGACCAG...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTCACATATGTGACCTCTaGGCCGTCCCGCTTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLHICDL*AVPLLK Trigger: TTTCAGAAGCGGGACGGCTCAGAGGTCACATATGTG...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | ACACATGAAAGTAATGCCAGTAACAAAAGCCATCCTTTTTGGCTTGGTGGAATACGGACGTGTTGCTTCTaGGTCCACAACAGTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: THESNASNKSHPFWLGGIRTCCF*VHNSAE Trigger: CTCGGCACTGTTGTGGACTCAGAAGCAACACGTCCG...TATTCCACCAAGCCAAAAAGGATGGCTTTTGTTACTGGCATTACTTTCATGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCATCCCAAATCACATGGAGAGAAAAACTGTATGCCATGTTCCCATAGCATTGAAGGTCAGTCGCTaGATGTGGTCAGGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EAIPNHMERKTVCHVPIALKVSR*MWSGFK Trigger: CTTGAAGCCTGACCACATGCAGCGACTGACCTTCAA...TGCTATGGGAACATGGCATACAGTTTTTCTCTCCATGTGATTTGGGATGGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGAGCTGGCTTCCAAAATaGAATCCCCAGGTCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLSWLPK*NPQVSS Trigger: GCTTGAGACCTGGGGATTGCATTTTGGAAGCCAGCT...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACACTTCCCTAGCACTGTaGCCAGTGGTGATGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHTSLAL*PVVMPR Trigger: GCGAGGCATCACCACTGGCCACAGTGCTAGGGAAGT...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACAGAGAAAGCAGAGCTCTaGCATCAGGTGGACCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATEKAEL*HQVDHL Trigger: CAGATGGTCCACCTGATGCCAGAGCTCTGCTTTCTC...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTAGTGAGACACAGAAATaGCAAACCCAGGCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLSETQK*QTQATG Trigger: CCCTGTGGCCTGGGTTTGCCATTTCTGTGTCTCACT...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGGATCTCCACTGGTTCTaGAGGCTTATAGAAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLDLHWF*RLIEVP Trigger: CGGAACTTCTATAAGCCTTCAGAACCAGTGGAGATC...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR TCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACAGGCAGAGATCAGTCATaGAGTCCAGAACGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATGRDQS*SPERSH Trigger: ATGAGACCGTTCTGGACTTCATGACTGATCTCTGCC...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACATTGAAGGTCAGTCGCTaGATGTGGTCAGGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATLKVSR*MWSGFK Trigger: CTTGAAGCCTGACCACATGCAGCGACTGACCTTCAA...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGGGAGTGTTTTCTCTTTaGCAAAAGAGACGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSKMTHDKATRKPITLGVFSL*QKRRCG Trigger: GCCACACCGTCTCTTTTGCCAAAGAGAAAACACTCC...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACATCTGAAAGGCCTGTGTaGGCTTCACAGACCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATSERPV*ASQTSQ Trigger: TTGACTGGTCTGTGAAGCCCACACAGGCCTTTCAGA...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACGCATGGCGATCTTGGTaGCCACACTCAGCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHAWRSW*PHSASF Trigger: GAACGATGCTGAGTGTGGCCACCAAGATCGCCATGC...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGACTTGGTTCCTTGTaGACACTTTGTGCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATRLGSL*TLCATR Trigger: CCTGGTGGCACAAAGTGTCCACAAGGAACCAAGTCT...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| 3UTR CAA 72 bp | GTGCCACATGGAAGGAGCCACAGTCACGATGTCGCTTaGTCATCTTCATTCCTCCCAAAGGTTTTAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPHGRSHSHDVA*SSSFLPKVLNR Trigger: TCTATTTAAAACCTTTGGGAGGAATGAAGATGACAAAGCGACATCGTGACTGTGGCTCCTTCCATGTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
||
| CDS-3UTR TCA 90 bp | AATAAACACATGAAAGTAATGCCAGTAACAAAAGCCATCCTTTTTGGCTTGGTGCCAGTACTCAGGAGCTaGGGCAGGGGTACTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NKHMKVMPVTKAILFGLVPVLRS*GRGTVT Trigger: TGTAACAGTACCCCTGCCTCAGCTCCTGAGTACTGG...CACCAAGCCAAAAAGGATGGCTTTTGTTACTGGCATTACTTTCATGTGTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACGTCAGTCGCTGCATGTaGTCAGGCTTCAAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHVSRCM*SGFKAL Trigger: CAATGCCTTGAAGCCTGACCACATGCAGCGACTGAC...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGGTACTGGTACAGCTaGCAATCCTGGGGCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHWYWYS*QSWGKS Trigger: AGATTTGCCCCAGGATTGGCAGCTGTACCAGTACCA...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGGGGTCAACTTTTCCCTaGTACAGACACCCAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSCDDISQVPHENLPQALGSTFP*YRHPTL Trigger: AAGAGTTGGGTGTCTGTACCAGGGAAAAGTTGACCC...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR GCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACCTTCGAAGTCCTGTCTaGCTTTGCCTCTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHLRSPV*LCLFFP Trigger: TGGAAAGAAGAGGCAAAGGCAGACAGGACTTCGAAG...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR GCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACCCAGAACGGTCTCATTaGGGAGGACTTTGTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHPERSH*GGLCSS Trigger: TGAACTACAAAGTCCTCCGCAATGAGACCGTTCTGG...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACCTGAGAGGAAAAGGCTaGCACCGTCAAATGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHLRGKG*HRQMLL Trigger: CAAAAGCATTTGACGGTGCCAGCCTTTTCCTCTCAG...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTAAGATCGCATATCTTTaGACCAGTCAGCAGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLKIAYL*TSQQQM Trigger: CATTTGCTGCTGACTGGTCCAAAGATATGCGATCTT...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTTACAGCTGCCAATCCTaGGGCAAATCTAAATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HDKATRKPITLWVLFVCLYSCQS*GKSKLK Trigger: CTTTAATTTAGATTTGCCCCAGGATTGGCAGCTGTA...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CCA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAAGTTCCGTCCAATTTaGTACATACTCAAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKYKAEPGQSKMTHDKATKFRPI*YILKFF Trigger: GAAAAACTTGAGTATGTACCAAATTGGACGGAACTT...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| 3UTR CAA 72 bp | AAAGTAATGCCAGTAACAAAAGCCATCCTTTTTGGCTaGGTGGAATATGCAAATTCTACCATAGTACCATCC | + |
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Preference number: 4 (lower is better) Translates to: KVMPVTKAILFG*VEYANSTIVPS Trigger: GGATGGTACTATGGTAGAATTTGCATATTCCACCAAGCCAAAAAGGATGGCTTTTGTTACTGGCATTACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| 3UTR CAA 72 bp | CACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTaGTCTTTGTTGGTTTTAGACACAAGTGAAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: HKKTHHSVGSVC*SLLVLDTSETK Trigger: TTTTGTTTCACTTGTGTCTAAAACCAACAAAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS GCA 90 bp | CGAGCCACTGGGTTCCTCTGGATGTCATCCACGAGTCGGGCCAGCTaGTGCTGCCTTCCCACAGGACTGAGCCGAGTCTCTTCAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: RATGFLWMSSTSRAS*CCLPTGLSRVSSAT Trigger: AGTAGCTGAAGAGACTCGGCTCAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGGAACCCAGTGGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS GCA 90 bp | ACTGGGTTCCTCTGGATGTCATCCACGAGTCGGGCCAGCTGCTGCTaGCTTCCCACAGGACTGAGCCGAGTCTCTTCAGCTACTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TGFLWMSSTSRASCC*LPTGLSRVSSATAF Trigger: GAAGGCAGTAGCTGAAGAGACTCGGCTCAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGGAACCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CCA 90 bp | TGCAATCCCCAGGTCTCAAGCTCAAACCGAGCCACTGGGTTCCTCTaGATGTCATCCACGAGTCGGGCCAGCTGCTGCTGCCTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CNPQVSSSNRATGFL*MSSTSRASCCCLPT Trigger: TGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGGAACCCAGTGGCTCGGTTTGAGCTTGAGACCTGGGGATTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS GCA 90 bp | GAAGGTAAGGTTCTCTGGATGTCATCCACGAGTCGGGCCAGCTGCTaGTGCCTTCCCACAGGACTGAGCCGAGTCTCTTCAGCTACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGKVLWMSSTSRASC*CLPTGLSRVSSATA Trigger: GGCAGTAGCTGAAGAGACTCGGCTCAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGAACCTTACCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS-3UTR CAA 90 bp | TCCCAATACTTAAAGTTAGGCCCAAGCCCCGTAAGCCGCAGGAGCCTGAGCGGTTCAGCACACACTGGCTaGGCACTGGGCAGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQYLKLGPSPVSRRSLSGSAHTG*ALGSQS Trigger: GCTCTGACTGCCCAGTGCCAAGCCAGTGTGTGCTGA...ACCGCTCAGGCTCCTGCGGCTTACGGGGCTTGGGCCTAACTTTAAGTATTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS GCA 90 bp | GTCATCTGCATGGCGATCTTGGTGGCCACACTCAGCATCGTTCCCTaGTTATTCAAGGTCCGGGTCAGCACACACTGGCTTGGCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VICMAILVATLSIVP*LFKVRVSTHWLGTG Trigger: CCCAGTGCCAAGCCAGTGTGTGCTGACCCGGACCTTGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 90 bp | TCAGAGGGAACAACCCGGCCGGTCAGGGATAGCTGGCTTCCAAAATaGAATCCCCAGGTCTCAAGCTCAAACCGAGCCACTGGGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SEGTTRPVRDSWLPK*NPQVSSSNRATGFL Trigger: GAGGAACCCAGTGGCTCGGTTTGAGCTTGAGACCTGGGGATTGCATTTTGGAAGCCAGCTATCCCTGACCGGCCGGGTTGTTCCCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CCA 90 bp | GGCAGAGGGATTCCCGGGGAGAGGCTCAGGGCAGTTAACAGCTGCTaGGCAAAGGGAAGCACAGTGCTCAGTGGTATAGCACTGCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGIPGERLRAVNSC*AKGSTVLSGIALLS Trigger: ACTTAGCAGTGCTATACCACTGAGCACTGTGCTTCCCTTTGCCCAGCAGCTGTTAACTGCCCTGAGCCTCTCCCCGGGAATCCCTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS TCA 90 bp | CCCGTCCACTCATGTTCCTGGGTGCCAGCGGCTTTCCAGGGCTGGTaGGCCTCAACAGGAGTGTTTTCTCTTTGGCAAAAGAGACGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PVHSCSWVPAAFQGW*ASTGVFSLWQKRRC Trigger: ACACCGTCTCTTTTGCCAAAGAGAAAACACTCCTGTTGAGGCTCACCAGCCCTGGAAAGCCGCTGGCACCCAGGAACATGAGTGGACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 90 bp | CCTTCATCAGGCGGAAATCTGAGGTTGCTTGGCTGCTCAGGCCTGTaGGAAAGCAGAGCTCTGGCATCAGGTGGACCATCTGAGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PSSGGNLRLLGCSGL*ESRALASGGPSEAQ Trigger: CTGAGCCTCAGATGGTCCACCTGATGCCAGAGCTCTGCTTTCTCACAGGCCTGAGCAGCCAAGCAACCTCAGATTTCCGCCTGATGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 90 bp | GGGATCTCCACAGACCACAGCTCTCCGCCAAGTTTGCAGGTCATCTaGATGGCGATCTTGGTGGCCACACTCAGCATCGTTCCCTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GISTDHSSPPSLQVI*MAILVATLSIVPCL Trigger: TAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGTGGAGATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 90 bp | GGGACTTCAATGGGATCTCCACAGACCACAGCTCTCCGCCAAGTTTaGAGGTCATCTGCATGGCGATCTTGGTGGCCACACTCAGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSMGSPQTTALRQV*RSSAWRSWWPHSAS Trigger: CGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGTGGAGATCCCATTGAAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | ACCACAGCTCTCCGCCAAGTTTGCAGGTCATCTGCATGGCGATCTTaGTGGCCACACTCAGCATCGTTCCCTGCTTATTCAAGGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TTALRQVCRSSAWRS*WPHSASFPAYSRSG Trigger: CCCGGACCTTGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | ACAGCTCTCCGCCAAGTTTGCAGGTCATCTGCATGGCGATCTTGGTaGCCACACTCAGCATCGTTCCCTGCTTATTCAAGGTCCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TALRQVCRSSAWRSW*PHSASFPAYSRSGS Trigger: TGACCCGGACCTTGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | TCTCCACAGACCACAGCTCTCCGCCAAGTTTGCAGGTCATCTGCATaGCGATCTTGGTGGCCACACTCAGCATCGTTCCCTGCTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: SPQTTALRQVCRSSA*RSWWPHSASFPAYS Trigger: TGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 90 bp | GTAGCTGTGGGACTTCATATTCCAAAACTGCCTTTAGCTGGCCATTaGCTACACCGTCCCGGTACACGACTATCCGTGCCGGCAAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: VAVGLHIPKLPLAGH*LHRPGTRLSVPASH Trigger: ATGACTTGCCGGCACGGATAGTCGTGTACCGGGACGGTGTAGGCAATGGCCAGCTAAAGGCAGTTTTGGAATATGAAGTCCCACAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 ENSMUST00000136399.8 |
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| CDS CCA 90 bp | CTTTTCAGTAGCTGTGGGACTTCATATTCCAAAACTGCCTTTAGCTaGCCATTGCCTACACCGTCCCGGTACACGACTATCCGTGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: LFSSCGTSYSKTAFS*PLPTPSRYTTIRAG Trigger: GCCGGCACGGATAGTCGTGTACCGGGACGGTGTAGGCAATGGCCAGCTAAAGGCAGTTTTGGAATATGAAGTCCCACAGCTACTGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 ENSMUST00000136399.8 |
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| CDS GCA 90 bp | GTACCACCGGTTGAGAGCACCAGTCATGCAGACTTTGAGGCAATCTaGAATATCAGCCGCTGTTCTCTGAAGGACACAGCGGGAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: VPPVESTSHADFEAI*NISRCSLKDTAGKP Trigger: TGGTTTTCCCGCTGTGTCCTTCAGAGAACAGCGGCTGATATTGCAGATTGCCTCAAAGTCTGCATGACTGGTGCTCTCAACCGGTGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | GGCATCTCTGCAGATATCAATACCCACGACCATCAGGGACTTCAATaGGATCTCCACAGACCACAGCTCTCCGCCAAGTTTGCAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GISADINTHDHQGLQ*DLHRPQLSAKFAGH Trigger: ATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGTGGAGATCCCATTGAAGTCCCTGATGGTCGTGGGTATTGATATCTGCAGAGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | AAGCACAGTGCTCAGTGGTATAGCACTGCTAAGTCCTCCTGGCTCTaGGGCCCACAAAGGCAAGGAAGTATGAGAGAGAACTTCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KHSAQWYSTAKSSWL*GPQRQGSMRENFLR Trigger: TCTCAAGAAGTTCTCTCTCATACTTCCTTGCCTTTGTGGGCCCCAGAGCCAGGAGGACTTAGCAGTGCTATACCACTGAGCACTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS TCA 90 bp | GGTGATATCATATTGCTGCTTGTAGTAATCCACATATGTGACCTCTaGGCCGTCCCGCTTCTGAAAGGCCTGTGTGGGCTTCACAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: GDIILLLVVIHICDL*AVPLLKGLCGLHRP Trigger: TGGTCTGTGAAGCCCACACAGGCCTTTCAGAAGCGGGACGGCTCAGAGGTCACATATGTGGATTACTACAAGCAGCAATATGATATCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 90 bp | CAAAACTTTGCAAGATCGCATATCTTTGGACCAGTCAGCAGCAAATaGAGGTTGACACAAGAACAGGAAGGAGGGAGGCTTGAGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QNFARSHIFGPVSSK*RLTQEQEGGRLEVG Trigger: CCCCACCTCAAGCCTCCCTCCTTCCTGTTCTTGTGTCAACCTGCATTTGCTGCTGACTGGTCCAAAGATATGCGATCTTGCAAAGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS TCA 90 bp | CCAGAACGGTCTCATTGCGGAGGACTTTGTAGTTCACGTCAGCATTaGATAGGAGCTTGTTGTACTGAGGGATCTCCACTGGTTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PERSHCGGLCSSRQH*IGACCTEGSPLVLK Trigger: CTTCAGAACCAGTGGAGATCCCTCAGTACAACAAGCTCCTATTCAATGCTGACGTGAACTACAAAGTCCTCCGCAATGAGACCGTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS TCA 90 bp | GTCATGCAGACTTTGAGGCAATCTGCAATATCAGCCGCTGTTCTCTaGAGGACACAGCGGGAAAACCACCTGGTGATCCTGGAATTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VMQTLRQSAISAAVL*RTQRENHLVILELM Trigger: CATTAATTCCAGGATCACCAGGTGGTTTTCCCGCTGTGTCCTTCAGAGAACAGCGGCTGATATTGCAGATTGCCTCAAAGTCTGCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 90 bp | GGATTCCATGACAAGACTGCCAGTTGTAGTAGAGATGGCACAGTTTaGAGGTCAGTCGCTGCATGTGGTCAGGCTTCAAGGCATTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GFHDKTASCSRDGTV*RSVAACGQASRHCH Trigger: ATGACAATGCCTTGAAGCCTGACCACATGCAGCGACTGACCTTCAAACTGTGCCATCTCTACTACAACTGGCAGTCTTGTCATGGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| CDS CCA 90 bp | GCAATCCTCAGCCTCCTAGAGGCTAAATCTGGGCTGTACGTGACATaGTACTGGTACAGCTGCCAATCCTGGGGCAAATCTAAATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AILSLLEAKSGLYVT*YWYSCQSWGKSKLK Trigger: CTTTAATTTAGATTTGCCCCAGGATTGGCAGCTGTACCAGTACCATGTCACGTACAGCCCAGATTTAGCCTCTAGGAGGCTGAGGATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | TCCCTGCTTATTCAAGGTCCGGGTCAGCACACACTGGCTTGGCACTaGGCAGTCAGAGCTCAAATACTTTTTAATGGAGTCGTAATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLIQGPGQHTLAWH*AVRAQILFNGVVIV Trigger: AACTATTACGACTCCATTAAAAAGTATTTGAGCTCTGACTGCCCAGTGCCAAGCCAGTGTGTGCTGACCCGGACCTTGAATAAGCAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACGGCGGAAATCTGAGGTaGCTTGGCTGCTCAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHGGNLR*LGCSGL Trigger: CAGGCCTGAGCAGCCAAGCAACCTCAGATTTCCGCC...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGTTCCTTGTGGACACTTaGTGCCACCAGGAAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGQSKMTHDKATRKPITLFLVDT*CHQEGQ Trigger: CTGACCTTCCTGGTGGCACAAAGTGTCCACAAGGAA...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS TCA 90 bp | CCCAGGCCACAGGGACAATTTGTACTGAGGGATCTCCACTGGTTCTaGAGGCTTATAGAAGTTCCGTCCAATTTGGTACATACTCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRPQGQFVLRDLHWF*RLIEVPSNLVHTQV Trigger: AACTTGAGTATGTACCAAATTGGACGGAACTTCTATAAGCCTTCAGAACCAGTGGAGATCCCTCAGTACAAATTGTCCCTGTGGCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS TCA 90 bp | CCAGAACGGTCTCATTGCGGAGGACTTTGTAGTTCACGTCAGCATTaGATAGGAGCTTGCTTTCAAAGTGAGACACAGAAATGGCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: PERSHCGGLCSSRQH*IGACFQSETQKWQT Trigger: GGTTTGCCATTTCTGTGTCTCACTTTGAAAGCAAGCTCCTATTCAATGCTGACGTGAACTACAAAGTCCTCCGCAATGAGACCGTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CCA 90 bp | AAATCTGGGCTGTACGTGACATGGTACTGGTACAGCTGCCAATCCTaGGGCAAATCTAAATTAAAGAGATTTGTAACCAGCCGCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSGLYVTWYWYSCQS*GKSKLKRFVTSRTG Trigger: ACCTGTGCGGCTGGTTACAAATCTCTTTAATTTAGATTTGCCCCAGGATTGGCAGCTGTACCAGTACCATGTCACGTACAGCCCAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | CTCAGCCTCCTAGAGGCTAAATCTGGGCTGTACGTGACATGGTACTaGTACAGCTGCCAATCCTGGGGCAAATCTAAATTAAAGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLLEAKSGLYVTWY*YSCQSWGKSKLKRF Trigger: AAATCTCTTTAATTTAGATTTGCCCCAGGATTGGCAGCTGTACCAGTACCATGTCACGTACAGCCCAGATTTAGCCTCTAGGAGGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | ATAGTCTCACCTCTTTGTGTTTCACTTGTCAGTTCTGTGACCTTCTaGTCCAGCTTTTCTGAGAGGAAAAGGCTGGCACCGTCAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: IVSPLCVSLVSSVTF*SSFSERKRLAPSNA Trigger: AGCATTTGACGGTGCCAGCCTTTTCCTCTCAGAAAAGCTGGACCAGAAGGTCACAGAACTGACAAGTGAAACACAAAGAGGTGAGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 90 bp | CTAGAGGCTAAATCTGGGCTGTACGTGACATGGTACTGGTACAGCTaGCAATCCTGGGGCAAATCTAAATTAAAGAGATTTGTAACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEAKSGLYVTWYWYS*QSWGKSKLKRFVTS Trigger: GCTGGTTACAAATCTCTTTAATTTAGATTTGCCCCAGGATTGGCAGCTGTACCAGTACCATGTCACGTACAGCCCAGATTTAGCCTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGTGCACACAGGGGAGTTaGGGAAGAGCTTGCTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSCDDISQVPHENLPQALCTQGS*GRACSL Trigger: TAACGAGCAAGCTCTTCCCAAACTCCCCTGTGTGCA...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTACCAGGAAGGTCAGCTaGTGTGCATATTGGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HDKATRKPITLWVLFVCLTRKVS*CAYWHG Trigger: ACCATGCCAATATGCACACAAGCTGACCTTCCTGGT...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGAGCAGCAAATGCAGGTaGACATGTGTGGTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSCDDISQVPHENLPQALSSKCR*TCVVLQ Trigger: CTGCAGGACCACACATGTCAACCTGCATTTGCTGCT...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CCA 90 bp | TATTCAAAGGCTGAGAACTCAAAACTTTGCAAGATCGCATATCTTTaGACCAGTCAGCAGCAAATGCAGGTTGACATGTGTGGTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSKAENSKLCKIAYL*TSQQQMQVDMCGPA Trigger: TGCAGGACCACACATGTCAACCTGCATTTGCTGCTGACTGGTCCAAAGATATGCGATCTTGCAAAGTTTTGAGTTCTCAGCCTTTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGGAGTGTTTTCTCTTaGGCAAAAGAGACGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EKYKAEPGQSKMTHDKATRSVFS*AKETVW Trigger: CCACACCGTCTCTTTTGCCAAAGAGAAAACACTCCT...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | CCAGGCCAAAGTAAAATGACACATGACAAAGCCACAAGAAAACCCATCACTCTGCAAGATCGCATATCTTaGGACCAGTCAGCAGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PGQSKMTHDKATRKPITLQDRIS*DQSAAN Trigger: ATTTGCTGCTGACTGGTCCAAAGATATGCGATCTTG...CAGAGTGATGGGTTTTCTTGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS GCA 90 bp | AGCACACGATCAACCATCTATTCAAAGGCTGAGAACTCAAAACTTTaGAAGATCGCATATCTTTGGACCAGTCAGCAGCAAATGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: STRSTIYSKAENSKL*KIAYLWTSQQQMQV Trigger: AACCTGCATTTGCTGCTGACTGGTCCAAAGATATGCGATCTTGCAAAGTTTTGAGTTCTCAGCCTTTGAATAGATGGTTGATCGTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 90 bp | TATTCAAAGGCTGAGAACTCAAAACTTTGCAAGATCGCATATCTTTaGACCAGTCAGCAGCAAATGCAGGTTGACACAAGAACAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSKAENSKLCKIAYL*TSQQQMQVDTRTGR Trigger: CCTTCCTGTTCTTGTGTCAACCTGCATTTGCTGCTGACTGGTCCAAAGATATGCGATCTTGCAAAGTTTTGAGTTCTCAGCCTTTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS-3UTR CAA 90 bp | CATGACAAAGCCACAAGAAAACCCATCACTCTGTGGGTTCTGTTTGTTTGTCTTTGGCTAATTCCAGACTaGGTTCCTTGTGGACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: HDKATRKPITLWVLFVCLWLIPD*VPCGHF Trigger: AAAGTGTCCACAAGGAACCAAGTCTGGAATTAGCCA...AAGACAAACAAACAGAACCCACAGAGTGATGGGTTTTCTTGTGGCTTTGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | GAGAAATACAAGGCTGAACCAGGCCAAAGTAAAATGACACATGACAAAGCCACACGATATGTTTTGTTGTaGTATCTGGTAAGGACAACG | + |
|
Preference number: 5 (lower is better) Translates to: EKYKAEPGQSKMTHDKATRYVLL*YLVRTT Trigger: CGTTGTCCTTACCAGATACAACAACAAAACATATCG...TGTGGCTTTGTCATGTGTCATTTTACTTTGGCCTGGTTCAGCCTTGTATTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | TTAGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTATAGTCTCACCTCTTaGTGTTTCACTTGTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEAVMIYPKYHMRIYLKHYSLTS*CFTCQF Trigger: GAACTGACAAGTGAAACACAAAGAGGTGAGACTATA...GTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS-3UTR CAA 90 bp | AGAAGCTGTGATGATATATCCCAAGTACCACATGAGAATTTACCTCAAGCACTGGAAGTTCCGTCCAATTaGGTACATACTCAAGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSCDDISQVPHENLPQALEVPSN*VHTQVF Trigger: AAAAACTTGAGTATGTACCAAATTGGACGGAACTTC...CAGTGCTTGAGGTAAATTCTCATGTGGTACTTGGGATATATCATCACAGCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CCA 72 bp | AGGTCTCTTGAGGACCGCCCCACTTCCCTAGCACTGTaGCCAGTGGTGATGCCTCGCGCTCTCACACGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSLEDRPTSLAL*PVVMPRALTRA Trigger: GGCCCGTGTGAGAGCGCGAGGCATCACCACTGGCCACAGTGCTAGGGAAGTGGGGCGGTCCTCAAGAGACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 72 bp | GGGTTCCTCTGGATGTCATCCACGAGTCGGGCCAGCTaGTGCTGCCTTCCCACAGGACTGAGCCGAGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFLWMSSTSRAS*CCLPTGLSRVS Trigger: AGAGACTCGGCTCAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGGAACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CCA 72 bp | CAGGTCTCAAGCTCAAACCGAGCCACTGGGTTCCTCTaGATGTCATCCACGAGTCGGGCCAGCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QVSSSNRATGFL*MSSTSRASCCC Trigger: GCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGGAACCCAGTGGCTCGGTTTGAGCTTGAGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS GCA 72 bp | GTTCTCTGGATGTCATCCACGAGTCGGGCCAGCTGCTaGTGCCTTCCCACAGGACTGAGCCGAGTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VLWMSSTSRASC*CLPTGLSRVSS Trigger: TGAAGAGACTCGGCTCAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS GCA 72 bp | AAGGTTCTCTGGATGTCATCCACGAGTCGGGCCAGCTaGTGCTGCCTTCCCACAGGACTGAGCCGAGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KVLWMSSTSRAS*CCLPTGLSRVS Trigger: AGAGACTCGGCTCAGTCCTGTGGGAAGGCAGCAGCAGCTGGCCCGACTCGTGGATGACATCCAGAGAACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS CCA 72 bp | ATGCAATCCCCAGGTCTCAAGCTCAAACCGAGCCACTaGGTTCCTCTGGATGTCATCCACGAGTCGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MQSPGLKLKPSH*VPLDVIHESGQ Trigger: CTGGCCCGACTCGTGGATGACATCCAGAGGAACCCAGTGGCTCGGTTTGAGCTTGAGACCTGGGGATTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CAA 90 bp | GACCACAGCTCTCCGCCAAGTTTGCAGGTCATCTGCATGGCGATCTaGGTGGCCACACTCAGCATCGTTCCCTGCTTATTCAAGGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: DHSSPPSLQVICMAI*VATLSIVPCLFKVR Trigger: CCGGACCTTGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | GGCGGAAATCTGAGGTTGCTTGGCTGCTCAGGCCTGTaGGAAAGCAGAGCTCTGGCATCAGGTGGACCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GGNLRLLGCSGL*ESRALASGGPS Trigger: AGATGGTCCACCTGATGCCAGAGCTCTGCTTTCTCACAGGCCTGAGCAGCCAAGCAACCTCAGATTTCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 72 bp | ATGGGATCTCCACAGACCACAGCTCTCCGCCAAGTTTaGAGGTCATCTGCATGGCGATCTTGGTGGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: MGSPQTTALRQV*RSSAWRSWWPH Trigger: GTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGTGGAGATCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 72 bp | ACCACAGCTCTCCGCCAAGTTTGCAGGTCATCTGCATaGCGATCTTGGTGGCCACACTCAGCATCGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TTALRQVCRSSA*RSWWPHSASFP Trigger: AGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 90 bp | AGGGACTTCAATGGGATCTCCACAGACCACAGCTCTCCGCCAAGTTaGCAGGTCATCTGCATGGCGATCTTGGTGGCCACACTCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RDFNGISTDHSSPPS*QVICMAILVATLSI Trigger: GATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGTGGAGATCCCATTGAAGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | CACCAGAAGAGACACCAAGTTCATATGGCTGTGAAATaGCACTTGTCCCACCTCCGGCCTCGCTGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQKRHQVHMAVK*HLSHLRPRCPQ Trigger: CTGGGGACAGCGAGGCCGGAGGTGGGACAAGTGTCATTTCACAGCCATATGAACTTGGTGTCTCTTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 72 bp | ATGGCGATCTTGGTGGCCACACTCAGCATCGTTCCCTaGTTATTCAAGGTCCGGGTCAGCACACACTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: MAILVATLSIVP*LFKVRVSTHWL Trigger: AAGCCAGTGTGTGCTGACCCGGACCTTGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 72 bp | ACAGACCACAGCTCTCCGCCAAGTTTGCAGGTCATCTaGATGGCGATCTTGGTGGCCACACTCAGCATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TDHSSPPSLQVI*MAILVATLSIV Trigger: AACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 72 bp | AATGGGATCTCCACAGACCACAGCTCTCCGCCAAGTTaGCAGGTCATCTGCATGGCGATCTTGGTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: NGISTDHSSPPS*QVICMAILVAT Trigger: TGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGAGCTGTGGTCTGTGGAGATCCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | TCATGTTCCTGGGTGCCAGCGGCTTTCCAGGGCTGGTaGGCCTCAACAGGAGTGTTTTCTCTTTGGCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCSWVPAAFQGW*ASTGVFSLWQK Trigger: CTTTTGCCAAAGAGAAAACACTCCTGTTGAGGCTCACCAGCCCTGGAAAGCCGCTGGCACCCAGGAACATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 72 bp | CGCCAAGTTTGCAGGTCATCTGCATGGCGATCTTGGTaGCCACACTCAGCATCGTTCCCTGCTTATTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RQVCRSSAWRSW*PHSASFPAYSR Trigger: CCTTGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 72 bp | CTCCGCCAAGTTTGCAGGTCATCTGCATGGCGATCTTaGTGGCCACACTCAGCATCGTTCCCTGCTTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: LRQVCRSSAWRS*WPHSASFPAYS Trigger: TGAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 72 bp | TCTCCGCCAAGTTTGCAGGTCATCTGCATGGCGATCTaGGTGGCCACACTCAGCATCGTTCCCTGCTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: SPPSLQVICMAI*VATLSIVPCLF Trigger: GAATAAGCAGGGAACGATGCTGAGTGTGGCCACCAAGATCGCCATGCAGATGACCTGCAAACTTGGCGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 90 bp | ACGACTATCCGTGCCGGCAAGTCATGGTTGTGTCTGTACCACCGGTaGAGAGCACCAGTCATGCAGACTTTGAGGCAATCTGCAATATCA | + |
|
Preference number: 6 (lower is better) Translates to: TTIRAGKSWLCLYHR*RAPVMQTLRQSAIS Trigger: TGATATTGCAGATTGCCTCAAAGTCTGCATGACTGGTGCTCTCAACCGGTGGTACAGACACAACCATGACTTGCCGGCACGGATAGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | ACTTTGAGGCAATCTGCAATATCAGCCGCTGTTCTCTaGAGGACACAGCGGGAAAACCACCTGGTGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLRQSAISAAVL*RTQRENHLVIL Trigger: CAGGATCACCAGGTGGTTTTCCCGCTGTGTCCTTCAGAGAACAGCGGCTGATATTGCAGATTGCCTCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | TTAAGCCCTGCCAGTTGTAGTAGAGATGGCACAGTTTaGAGGTCAGTCGCTGCATGTGGTCAGGCTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPASCSRDGTV*RSVAACGQASR Trigger: CCTTGAAGCCTGACCACATGCAGCGACTGACCTTCAAACTGTGCCATCTCTACTACAACTGGCAGGGCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | GACAAGACTGCCAGTTGTAGTAGAGATGGCACAGTTTaGAGGTCAGTCGCTGCATGTGGTCAGGCTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DKTASCSRDGTV*RSVAACGQASR Trigger: CCTTGAAGCCTGACCACATGCAGCGACTGACCTTCAAACTGTGCCATCTCTACTACAACTGGCAGTCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136399.8 |
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| CDS GCA 72 bp | GTTGAGAGCACCAGTCATGCAGACTTTGAGGCAATCTaGAATATCAGCCGCTGTTCTCTGAAGGACACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VESTSHADFEAI*NISRCSLKDTA Trigger: CGCTGTGTCCTTCAGAGAACAGCGGCTGATATTGCAGATTGCCTCAAAGTCTGCATGACTGGTGCTCTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 72 bp | GCAGATATCAATACCCACGACCATCAGGGACTTCAATaGGATCTCCACAGACCACAGCTCTCCGCCAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ADINTHDHQGLQ*DLHRPQLSAKF Trigger: AAACTTGGCGGAGAGCTGTGGTCTGTGGAGATCCCATTGAAGTCCCTGATGGTCGTGGGTATTGATATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 72 bp | AGCTGTGGGACTTCATATTCCAAAACTGCCTTTAGCTaGCCATTGCCTACACCGTCCCGGTACACGACTATC | + |
|
Preference number: 6 (lower is better) Translates to: SCGTSYSKTAFS*PLPTPSRYTTI Trigger: GATAGTCGTGTACCGGGACGGTGTAGGCAATGGCCAGCTAAAGGCAGTTTTGGAATATGAAGTCCCACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 ENSMUST00000136399.8 |
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| CDS CAA 72 bp | TCGCATATCTTTGGACCAGTCAGCAGCAAATGCAGGTaGACACAAGAACAGGAAGGAGGGAGGCTTGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SHIFGPVSSKCR*TQEQEGGRLEV Trigger: CACCTCAAGCCTCCCTCCTTCCTGTTCTTGTGTCAACCTGCATTTGCTGCTGACTGGTCCAAAGATATGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS CAA 90 bp | TTTTCCCTGGTACAGACACCCAACTCTTCGAAGTCCTGTCTGCCTTaGCCTCTTCTTTCCATGAAGGTACGTCCACCATCACCAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSLVQTPNSSKSCLP*PLLSMKVRPPSPEE Trigger: CTCTTCTGGTGATGGTGGACGTACCTTCATGGAAAGAAGAGGCAAAGGCAGACAGGACTTCGAAGAGTTGGGTGTCTGTACCAGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 90 bp | CTGGAATTAATGCTGGCTACAAACCCGACGACCACCACATTCTTGTaGAGGGCATCTCTGCAGATATCAATACCCACGACCATCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LELMLATNPTTTTFL*RASLQISIPTTIRD Trigger: GTCCCTGATGGTCGTGGGTATTGATATCTGCAGAGATGCCCTCAACAAGAATGTGGTGGTCGTCGGGTTTGTAGCCAGCATTAATTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | ATATTGCTGCTTGTAGTAATCCACATATGTGACCTCTaGGCCGTCCCGCTTCTGAAAGGCCTGTGTGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILLLVVIHICDL*AVPLLKGLCGL Trigger: AAGCCCACACAGGCCTTTCAGAAGCGGGACGGCTCAGAGGTCACATATGTGGATTACTACAAGCAGCAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 90 bp | ATCCTGGAATTAATGCTGGCTACAAACCCGACGACCACCACATTCTaGTTGAGGGCATCTCTGCAGATATCAATACCCACGACCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ILELMLATNPTTTTF*LRASLQISIPTTIR Trigger: CCTGATGGTCGTGGGTATTGATATCTGCAGAGATGCCCTCAACAAGAATGTGGTGGTCGTCGGGTTTGTAGCCAGCATTAATTCCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
||
| CDS GCA 72 bp | ACTCTCCTCAGACAGCTCAGAAAGGCTTCAATCAAGTaGTCAGCCCTGTTACAGCACACGATCAACCATCTA | + |
|
Preference number: 6 (lower is better) Translates to: TLLRQLRKASIK*SALLQHTINHL Trigger: TAGATGGTTGATCGTGTGCTGTAACAGGGCTGAGCACTTGATTGAAGCCTTTCTGAGCTGTCTGAGGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
||
| CDS CAA 72 bp | TTAATGCTGGCTACAAACCCGACGACCACCACATTCTaGTTGAGGGCATCTCTGCAGATATCAATACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LMLATNPTTTTF*LRASLQISIPT Trigger: CGTGGGTATTGATATCTGCAGAGATGCCCTCAACAAGAATGTGGTGGTCGTCGGGTTTGTAGCCAGCATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | AGTGTTTTCTCTTTGGCAAAAGAGACGGTGTGGCTGTaGCTCGGAGTTTGGGAGTATTCAAGCTTCCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVFSLAKETVWL*LGVWEYSSFPR Trigger: TCTTGGGAAGCTTGAATACTCCCAAACTCCGAGTCACAGCCACACCGTCTCTTTTGCCAAAGAGAAAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | TCTCATTGCGGAGGACTTTGTAGTTCACGTCAGCATTaGATAGGAGCTTGTTGTACTGAGGGATCTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SHCGGLCSSRQH*IGACCTEGSPL Trigger: CAGTGGAGATCCCTCAGTACAACAAGCTCCTATTCAATGCTGACGTGAACTACAAAGTCCTCCGCAATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
||
| CDS CAA 90 bp | GGTCCAGCTTTTCTGAGAGGAAAAGGCTGGCACCGTCAAATGCTTTaGCCTTGTCTGAGAGTATGCTGTGATTATAAAGCAAAGCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: GPAFLRGKGWHRQML*PCLRVCCDYKAKQS Trigger: GGATTGCTTTGCTTTATAATCACAGCATACTCTCAGACAAGGCAAAAGCATTTGACGGTGCCAGCCTTTTCCTCTCAGAAAAGCTGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 90 bp | GTGGGCTTCACAGACCAGTCAATGTCATCGATACGATATGTTTTGTaGTTGTATCTGGTAAGGACAACGAGCCCCACTAGTTGTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VGFTDQSMSSIRYVL*LYLVRTTSPTSCLW Trigger: CCACAAACAACTAGTGGGGCTCGTTGTCCTTACCAGATACAACAACAAAACATATCGTATCGATGACATTGACTGGTCTGTGAAGCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 90 bp | TGTGTGGGCTTCACAGACCAGTCAATGTCATCGATACGATATGTTTaGTTGTTGTATCTGGTAAGGACAACGAGCCCCACTAGTTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: CVGFTDQSMSSIRYV*LLYLVRTTSPTSCL Trigger: CAAACAACTAGTGGGGCTCGTTGTCCTTACCAGATACAACAACAAAACATATCGTATCGATGACATTGACTGGTCTGTGAAGCCCACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | CAGGGACAATTTGTACTGAGGGATCTCCACTGGTTCTaGAGGCTTATAGAAGTTCCGTCCAATTTGGTACAT | + |
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Preference number: 6 (lower is better) Translates to: QGQFVLRDLHWF*RLIEVPSNLVH Trigger: ATGTACCAAATTGGACGGAACTTCTATAAGCCTTCAGAACCAGTGGAGATCCCTCAGTACAAATTGTCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS CCA 72 bp | CTGTACGTGACATGGTACTGGTACAGCTGCCAATCCTaGGGCAAATCTAAATTAAAGAGATTTGTAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LYVTWYWYSCQS*GKSKLKRFVTS Trigger: GCTGGTTACAAATCTCTTTAATTTAGATTTGCCCCAGGATTGGCAGCTGTACCAGTACCATGTCACGTACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 72 bp | GCTGAGAACTCAAAACTTTGCAAGATCGCATATCTTTaGACCAGTCAGCAGCAAATGCAGGTTGACACAAGA | + |
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Preference number: 6 (lower is better) Translates to: AENSKLCKIAYL*TSQQQMQVDTR Trigger: TCTTGTGTCAACCTGCATTTGCTGCTGACTGGTCCAAAGATATGCGATCTTGCAAAGTTTTGAGTTCTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076946.4 |
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| CDS CCA 72 bp | AAAAGATTATTGGCTAATTCCAGACTTGGTTCCTTGTaGACACTTTGTGCCACCAGGAAGGTCAGCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: KRLLANSRLGSL*TLCATRKVSLC Trigger: ACACAAGCTGACCTTCCTGGTGGCACAAAGTGTCCACAAGGAACCAAGTCTGGAATTAGCCAATAATCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CCA 72 bp | GCTGAGAACTCAAAACTTTGCAAGATCGCATATCTTTaGACCAGTCAGCAGCAAATGCAGGTTGACATGTGT | + |
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Preference number: 6 (lower is better) Translates to: AENSKLCKIAYL*TSQQQMQVDMC Trigger: ACACATGTCAACCTGCATTTGCTGCTGACTGGTCCAAAGATATGCGATCTTGCAAAGTTTTGAGTTCTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS TCA 72 bp | TCTCATTGCGGAGGACTTTGTAGTTCACGTCAGCATTaGATAGGAGCTTGCTTTCAAAGTGAGACACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SHCGGLCSSRQH*IGACFQSETQK Trigger: TTTCTGTGTCTCACTTTGAAAGCAAGCTCCTATTCAATGCTGACGTGAACTACAAAGTCCTCCGCAATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115644.10 |
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| CDS GCA 72 bp | AAATCTGGGCTGTACGTGACATGGTACTGGTACAGCTaGCAATCCTGGGGCAAATCTAAATTAAAGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: KSGLYVTWYWYS*QSWGKSKLKRF Trigger: AAATCTCTTTAATTTAGATTTGCCCCAGGATTGGCAGCTGTACCAGTACCATGTCACGTACAGCCCAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 72 bp | TTTCTGAGAGGAAAAGGCTGGCACCGTCAAATGCTTTaGCCTTGTCTGAGAGTATGCTGTGATTATAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: FLRGKGWHRQML*PCLRVCCDYKA Trigger: TGCTTTATAATCACAGCATACTCTCAGACAAGGCAAAAGCATTTGACGGTGCCAGCCTTTTCCTCTCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS CAA 72 bp | ACAGACCAGTCAATGTCATCGATACGATATGTTTTGTaGTTGTATCTGGTAAGGACAACGAGCCCCACTAGT | + |
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Preference number: 6 (lower is better) Translates to: TDQSMSSIRYVL*LYLVRTTSPTS Trigger: ACTAGTGGGGCTCGTTGTCCTTACCAGATACAACAACAAAACATATCGTATCGATGACATTGACTGGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS GCA 72 bp | TCAACCATCTATTCAAAGGCTGAGAACTCAAAACTTTaGAAGATCGCATATCTTTGGACCAGTCAGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: STIYSKAENSKL*KIAYLWTSQQQ Trigger: TTGCTGCTGACTGGTCCAAAGATATGCGATCTTGCAAAGTTTTGAGTTCTCAGCCTTTGAATAGATGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | CTGTTACAGCACACGATCAACCATCTATTCAAAGGCTaGGAACTCAAAACTTTGCAAGATCGCATATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLQHTINHLFKG*ELKTLQDRISL Trigger: CAAAGATATGCGATCTTGCAAAGTTTTGAGTTCTCAGCCTTTGAATAGATGGTTGATCGTGTGCTGTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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| CDS TCA 72 bp | TTTCTCTTTCTTTTCAACAGACTAACAAGCACTGGCTaGTTTAGGTCAGATAAGGTGATATCATATTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FLFLFNRLTSTG*FRSDKVISYCC Trigger: GCAGCAATATGATATCACCTTATCTGACCTAAATCAGCCAGTGCTTGTTAGTCTGTTGAAAAGAAAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076946.4 ENSMUST00000115644.10 |
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