Pregenerated sensors for PIWIL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033644Ensembl transcript IDs: ENSMUST00000048129.6, ENSMUST00000226229.2, ENSMUST00000226426.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCTGGACAATGTTGTCTTCGAGCCCAGGCTTGGCCTGTCTGAGTaGGGGCTGACACTGACTCCCACAGCCCCCGCTGCTCCTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: SLDNVVFEPRLGLSE*GLTLTPTAPAAPQD Trigger: GTCCTGAGGAGCAGCGGGGGCTGTGGGAGTCAGTGTCAGCCCTCACTCAGACAGGCCAAGCCTGGGCTCGAAGACAACATTGTCCAGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR TCA 90 bp | GGCTTCCCTGGACAATGTTGTCTTCGAGCCCAGGCTTGGCCTGTCTaGGTGAGGGCTGACACTGACTCCCACAGCCCCCGCTGCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: GFPGQCCLRAQAWPV*VRADTDSHSPRCSS Trigger: TGAGGAGCAGCGGGGGCTGTGGGAGTCAGTGTCAGCCCTCACTCAGACAGGCCAAGCCTGGGCTCGAAGACAACATTGTCCAGGGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CCA 90 bp | AAAAGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTaGGTCAGGTGGGCACATACGCCCGACTGTACCCTACGCTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: KSSSSQTLGKSDSQP*VRWAHTPDCTLRWF Trigger: AAACCAGCGTAGGGTACAGTCGGGCGTATGTGCCCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CCA 90 bp | CATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATaGGTGTATTTGAGGACCCTAACCCTTATTCCTCGCCAACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HFRSQPGLGHRLQKP*VYLRTLTLIPRQPL Trigger: CAGAGGTTGGCGAGGAATAAGGGTTAGGGTCCTCAAATACACCCATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CCA 90 bp | GCTGGCCTTGAACTAAAGATACTCCTGCTTCAGTCTCCCAAGTGCTaGGATAAAAGGCATGCACCACAACACCCTACTATGATATCAGGG | + |
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Preference number: 1 (lower is better) Translates to: AGLELKILLLQSPKC*DKRHAPQHPTMISG Trigger: CCCTGATATCATAGTAGGGTGTTGTGGTGCATGCCTTTTATCCCAGCACTTGGGAGACTGAAGCAGGAGTATCTTTAGTTCAAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR TCA 90 bp | TCAGGACTTCACACTGAGGCTCTCCTAGCACACTGTTATTTAAAATaGCTATTTCTGCTCAGTCCCCTACCATCCATCCACCACACCAAA | + |
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Preference number: 1 (lower is better) Translates to: SGLHTEALLAHCYLK*LFLLSPLPSIHHTK Trigger: TTTGGTGTGGTGGATGGATGGTAGGGGACTGAGCAGAAATAGTCATTTTAAATAACAGTGTGCTAGGAGAGCCTCAGTGTGAAGTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR TCA 90 bp | CACGCTCGGCTGAGGAGAAGCAGCGCTGACGGCACACACTCCATGAAGGCAGCGTTTTGTTGTGGGCTTTaGGGGGACAGTGGTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: HARLRRSSADGTHSMKAAFCCGL*GDSGLF Trigger: AAACAAACCACTGTCCCCTCAAAGCCCACAACAAAA...CGCTGCCTTCATGGAGTGTGTGCCGTCAGCGCTGCTTCTCCTCAGCCGAGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGACAAACTTGCTTCCTTaGCCCCAGGCTTTGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: SSSSQTLGKSDSQPWVRWTNLLP*PQALVL Trigger: CAAAACCAAAGCCTGGGGTCAAGGAAGCAAGTTTGT...CCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATTCTGTAAGGAGGAGCTaGGCTGAGTCCAGTTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GFYISGLSLALVIDSKSHSVRRS*AESSCS Trigger: GGAGCAACTGGACTCAGCTCAGCTCCTCCTTACAGA...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR GCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTAGTCCAGTTGCTCCTTaGAGCCGGTGTCCAAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: DFEIFQATPAHSWKRLLRSPVAP*SRCPSS Trigger: GGAACTTGGACACCGGCTGCAAGGAGCAACTGGACT...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR TCA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCAAGGAGGAGCTGAGCTaGGTCCAGTTGCTCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GQVSVLPKEKRSARNSNFKEELS*VQLLLA Trigger: TGCAAGGAGCAACTGGACTCAGCTCAGCTCCTCCTT...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR GCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATCTTCAGTCTCCCAAGTaGTGGGATAAAAGGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: GFYISGLSLALVIDSKSHLQSPK*WDKRHA Trigger: TGCATGCCTTTTATCCCAGCACTTGGGAGACTGAAG...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCCTGAAACTTTGGGATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCCCACCAGAAATAGGATaGTTCTGTAGGCATAACCTC | + |
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Preference number: 2 (lower is better) Translates to: GSLKLWDFEIFQATPAHSPPEIG*FCRHNL Trigger: GAGGTTATGCCTACAGAACCATCCTATTTCTGGTGG...GCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATCCCAAAGTTTCAGGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTTATTTAAAATGACTATTTCTGCTCAGTCCCCTACCATCCATCCACCACACTGCCATTTCTGTTaGTTCTGTAAGGAGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TLLFKMTISAQSPTIHPPHCHFC*FCKEEL Trigger: CAGCTCCTCCTTACAGAATCAACAGAAATGGCAGTG...TGGTGGATGGATGGTAGGGGACTGAGCAGAAATAGTCATTTTAAATAACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGCATAGAAAAACCAAGGCAGAGAAAGTACATTCTGGCATTATGGTCAAGACAAAAGTGTGTGCGTaGGCACATGCGTGTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: TRHRKTKAEKVHSGIMVKTKVCA*AHACIS Trigger: ACTGATACACGCATGTGCGCACGCACACACTTTTGT...CTTGACCATAATGCCAGAATGTACTTTCTCTGCCTTGGTTTTTCTATGCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR CCA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTCAGTCTCCCAAGTGCTaGGATAAAAGGCATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: NFYRQIQKTSREIQKVELQSPKC*DKRHAP Trigger: TGGTGCATGCCTTTTATCCCAGCACTTGGGAGACTG...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTGAATTTATTCAAGATGCTTTGGTTTTGTTGTaGGCTTTGAGGGGACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VPRSAESFPCVLIEFIQDALVLL*ALRGQW Trigger: CCACTGTCCCCTCAAAGCCCACAACAAAACCAAAGC...ATCTTGAATAAATTCAATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGCATAGAAAAACCAAGGCAGAGAAAGTACATTCTGGCATTATGGTCAAGTCATTTACAGACTTTTaGAGAAAAACTACACTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TRHRKTKAEKVHSGIMVKSFTDF*RKTTLH Trigger: GTGGAGTGTAGTTTTTCTGCAAAAGTCTGTAAATGA...CTTGACCATAATGCCAGAATGTACTTTCTCTGCCTTGGTTTTTCTATGCCTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR CCA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTGACTGTACCCTACGCTaGTTTTTCTACATGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: NFYRQIQKTSREIQKVELDCTLR*FFYMSF Trigger: GAAAGACATGTAGAAAAACCAGCGTAGGGTACAGTC...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR TCA 72 bp | TCCGAAGCTCCACGCTCGGCTGAGGAGAAGCAGCGCTaGCGGCACACACTCCATGAAGGCAGCGGGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SEAPRSAEEKQR*RHTLHEGSGQP Trigger: TGGCTGCCCGCTGCCTTCATGGAGTGTGTGCCGTCAGCGCTGCTTCTCCTCAGCCGAGCGTGGAGCTTCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CCA 72 bp | TCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTaGGTCAGGTGGGCACATACGCCCGACTGTACCCTA | + |
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Preference number: 3 (lower is better) Translates to: SSQTLGKSDSQP*VRWAHTPDCTL Trigger: TAGGGTACAGTCGGGCGTATGTGCCCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR TCA 72 bp | GCGGGCAGCCAGCGGCTACCTACAAACTTGCTTCCTTaGCCCCAGGCTTTGGTTTTGTTGTGGGCTTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AGSQRLPTNLLP*PQALVLLWALR Trigger: CCTCAAAGCCCACAACAAAACCAAAGCCTGGGGTCAAGGAAGCAAGTTTGTAGGTAGCCGCTGGCTGCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR TCA 72 bp | TCCACTGCCATTTCTGTTGATTCTGTAAGGAGGAGCTaGGCTGAGTCCAGTTGCTCCTTGCAGCCGGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: STAISVDSVRRS*AESSCSLQPVS Trigger: GGACACCGGCTGCAAGGAGCAACTGGACTCAGCTCAGCTCCTCCTTACAGAATCAACAGAAATGGCAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CCA 72 bp | TCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATaGGTGTATTTGAGGACCCTAACCCTTATTCCTCGC | + |
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Preference number: 3 (lower is better) Translates to: SQPGLGHRLQKP*VYLRTLTLIPR Trigger: GCGAGGAATAAGGGTTAGGGTCCTCAAATACACCCATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR GCA 72 bp | CTTGAACTAAAGATACTCCTGCTTCAGTCTCCCAAGTaGTGGGATAAAAGGCATGCACCACAACACCCTACT | + |
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Preference number: 3 (lower is better) Translates to: LELKILLLQSPK*WDKRHAPQHPT Trigger: AGTAGGGTGTTGTGGTGCATGCCTTTTATCCCAGCACTTGGGAGACTGAAGCAGGAGTATCTTTAGTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CCA 72 bp | GAACTAAAGATACTCCTGCTTCAGTCTCCCAAGTGCTaGGATAAAAGGCATGCACCACAACACCCTACTATG | + |
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Preference number: 3 (lower is better) Translates to: ELKILLLQSPKC*DKRHAPQHPTM Trigger: CATAGTAGGGTGTTGTGGTGCATGCCTTTTATCCCAGCACTTGGGAGACTGAAGCAGGAGTATCTTTAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR CAA 90 bp | ACACTGTTATTTAAAATGACTATTTCTGCTCAGTCCCCTACCATCCATCCACCAGTTTTGTTGTGGGCTTaGAGGGGACAGTGGTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: TLLFKMTISAQSPTIHPPVLLWA*RGQWFV Trigger: AACAAACCACTGTCCCCTCAAAGCCCACAACAAAAC...TGGTGGATGGATGGTAGGGGACTGAGCAGAAATAGTCATTTTAAATAACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR TCA 72 bp | GGCCCTAGGAAAATTTCCTACATGTCTAGACTCAGGTaGGACTATCACATTTTTCCAAGCCAACTTTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GPRKISYMSRLR*DYHIFPSQLWE Trigger: TTCCCAAAGTTGGCTTGGAAAAATGTGATAGTCTCACCTGAGTCTAGACATGTAGGAAATTTTCCTAGGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR CAA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTCAGGCTTTGGTTTTGTaGTGGGCTTTGAGGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: NFYRQIQKTSREIQKVELQALVL*WALRGQ Trigger: CTGTCCCCTCAAAGCCCACAACAAAACCAAAGCCTG...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CCA 72 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTaGAAGAGACTCTTGCGTAATCTCATTTACAGACTT | + |
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Preference number: 3 (lower is better) Translates to: DFEIFQATPAHS*KRLLRNLIYRL Trigger: AAGTCTGTAAATGAGATTACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATTACAAACTTGCTTCCTaGACCCCAGGCTTTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHYKLAS*TPGFGF Trigger: AAAACCAAAGCCTGGGGTCAAGGAAGCAAGTTTGTA...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | CACGCTCGGCTGAGGAGAAGCAGCGCTGACGGCACACACTCCATGAAGGCAGCGCTGAGATGGGTGGACTaGGGTGGGCCCCCTGAACAA | + |
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Preference number: 4 (lower is better) Translates to: HARLRRSSADGTHSMKAALRWVD*GGPPEQ Trigger: TTGTTCAGGGGGCCCACCCCAGTCCACCCATCTCAG...CGCTGCCTTCATGGAGTGTGTGCCGTCAGCGCTGCTTCTCCTCAGCCGAGCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | CACGCTCGGCTGAGGAGAAGCAGCGCTGACGGCACACACTCCATGAAGGCAGCGTATTCTGTCTCTCACTaGGCCGGTGGATCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HARLRRSSADGTHSMKAAYSVSH*AGGSAA Trigger: CGCTGCTGATCCACCGGCCCAGTGAGAGACAGAATA...CGCTGCCTTCATGGAGTGTGTGCCGTCAGCGCTGCTTCTCCTCAGCCGAGCGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR TCA 90 bp | AGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGGCACATACGCCCGTGGATGGCTGGCTCATaGTGCAAAATCTGTCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: RLSGSQTHSPGSGGHIRPWMAGS*CKICPD Trigger: GTCCGGACAGATTTTGCATCATGAGCCAGCCATCCA...CGGGCGTATGTGCCCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR GCA 90 bp | AAAAGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGGAGGGCACTGGGGACTaGACGCAGCACAGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KSSSSQTLGKSDSQPWVREGTGD*TQHSFL Trigger: CAAGAAGCTGTGCTGCGTGCAGTCCCCAGTGCCCTC...CCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | AGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGGCACATACGCCCGCTCTGCCTATACTACTaGCTGCTCGTCCCAGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: RLSGSQTHSPGSGGHIRPLCLYY*LLVPVV Trigger: TACCACTGGGACGAGCAGCCAGTAGTATAGGCAGAG...CGGGCGTATGTGCCCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | AGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGTACTGGCTGGAGTGGTaGGCTGGAGTCTTCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SSSSQTLGKSDSQPWVRWYWLEW*AGVFWF Trigger: AAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTA...CCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | AGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGGCACATACGCCCGTCCCACACAGCTGGATaGCTGGCTCATGATGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: RLSGSQTHSPGSGGHIRPSHTAG*LAHDAK Trigger: TTTTGCATCATGAGCCAGCCATCCAGCTGTGTGGGA...CGGGCGTATGTGCCCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR GCA 90 bp | AGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGCATTGTAGAAGGGGATaGACAGGTCAGAACACGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSSSQTLGKSDSQPWVRWHCRRG*TGQNTA Trigger: AGCCGTGTTCTGACCTGTGCATCCCCTTCTACAATG...CCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | AGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGCCATGCCACGGAACATaGACACCAAACCTACAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SSSSQTLGKSDSQPWVRWPCHGT*TPNLQN Trigger: ATTCTGTAGGTTTGGTGTCCATGTTCCGTGGCATGG...CCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| 3UTR CAA 72 bp | AGCGGGCAGCCAGCGGCTACCTACAAACTTGCTTCCTaGACCCCAGGCTTTGGTTTTGTTGTGGGCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SGQPAATYKLAS*TPGFGFVVGFE Trigger: CTCAAAGCCCACAACAAAACCAAAGCCTGGGGTCAAGGAAGCAAGTTTGTAGGTAGCCGCTGGCTGCCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | CACTCCACCCCAAATGTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTCAGAGCTGGAGGCTGTaGCAGCCGTGGGGGATCCCG | + |
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Preference number: 4 (lower is better) Translates to: HSTPNVPRSAESFPCVLIQSWRL*QPWGIP Trigger: CGGGATCCCCCACGGCTGCCACAGCCTCCAGCTCTG...AATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAACATTTGGGGTGGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR GCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTCACAAGGCCTCTGCCTaGAGGTCCTGCCCTACCCCA | + |
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Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRHKASA*RSCPTP Trigger: TGGGGTAGGGCAGGACCTGCAGGCAGAGGCCTTGTG...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | CACTCCACCCCAAATGTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTCCGCACACACTGAGATaGGTGGACTGGGGTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: HSTPNVPRSAESFPCVLIPHTLR*VDWGGP Trigger: GGGCCCACCCCAGTCCACCCATCTCAGTGTGTGCGG...AATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAACATTTGGGGTGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | AAAAGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGGCTGGAGTCTTCTaGTTTTCTAAACACAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KSSSSQTLGKSDSQPWVRWAGVF*FSKHKA Trigger: GGCCTTGTGTTTAGAAAACCAGAAGACTCCAGCCCA...CCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTCTCTCACTGGGCCGGTaGATCAGCAGCGGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRLSLGR*ISSGWS Trigger: TGACCAGCCGCTGCTGATCCACCGGCCCAGTGAGAG...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | ATGGTTGCAAATAACCAAAAGGACCAGAAAAGCAGCTCTAGCCAGACTCTCGGGCGCTCCGAAGCCTGGTaGGCTGACCAATGGTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MVANNQKDQKSSSSQTLGRSEAW*ADQWFG Trigger: TCCGAACCATTGGTCAGCCCACCAGGCTTCGGAGCG...CCCGAGAGTCTGGCTAGAGCTGCTTTTCTGGTCCTTTTGGTTATTTGCAACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | ATGGTTGCAAATAACCAAAAGGACCAGAAAAGCAGCTCTAGCCAGACTCTCGGGCCACGCTCCGAAGCCTaGTGGGCTGACCAATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MVANNQKDQKSSSSQTLGPRSEA*WADQWF Trigger: GAACCATTGGTCAGCCCACCAGGCTTCGGAGCGTGG...CCCGAGAGTCTGGCTAGAGCTGCTTTTCTGGTCCTTTTGGTTATTTGCAACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | ATGGTTGCAAATAACCAAAAGGACCAGAAAAGCAGCTCTAGCCAGACTCTCGGGAAGCCTCTGCCAGTTTaGTGTCCCCAGCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MVANNQKDQKSSSSQTLGKPLPV*CPQLPA Trigger: TGCTGGCAGCTGGGGACAGCAAACTGGCAGAGGCTT...CCCGAGAGTCTGGCTAGAGCTGCTTTTCTGGTCCTTTTGGTTATTTGCAACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTCGACCACAGAGCGCATaGCTCTGCTGGGGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRRPQSA*LCWGHG Trigger: ACCATGACCCCAGCAGAGGCATGCGCTCTGTGGTCG...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTTGCAAATAACCAAAAGGACCAGAAAAGCAGCTCTAGCCAGACTCTCGGGATCGGCAGAGTGCAGTaGAGTTGGAGACAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVANNQKDQKSSSSQTLGIGRVQ*SWRQSW Trigger: CCAGCTCTGTCTCCAACTTCACTGCACTCTGCCGAT...CCCGAGAGTCTGGCTAGAGCTGCTTTTCTGGTCCTTTTGGTTATTTGCAACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCTGAAACTTTGGGATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCCGAAGCCTGGTGGGCTaGCCAATGGTTCGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLKLWDFEIFQATPAHSRSLVG*PMVRTL Trigger: CAATGTCCGAACCATTGGTCAGCCCACCAGGCTTCG...GCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATCCCAAAGTTTCAGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATGAGGGGGTTACGAAGTaGTCAGGAGCAGCAAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GFYISGLSLALVIDSKSHEGVTK*SGAARY Trigger: GTACCTTGCTGCTCCTGATCACTTCGTAACCCCCTC...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATAGCGCATGCCTCTGCTaGGGTCATGGTACACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFYISGLSLALVIDSKSHSACLC*GHGTHP Trigger: TGGATGTGTACCATGACCCCAGCAGAGGCATGCGCT...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATCTGTCCACAATCTCCTaGTGTGGCATCTGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: GFYISGLSLALVIDSKSHLSTIS*CGIWNT Trigger: GGTGTTCCAGATGCCACATCAGGAGATTGTGGACAG...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCTCTGCCTGCAGGTCCTaGCCTACCCCAAGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQVSVLPKEKRSARNSNFSACRS*PTPSWF Trigger: GAACCAGCTTGGGGTAGGGCAGGACCTGCAGGCAGA...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATCTGTGTCAAGACCCATaGCACGGAACATGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: GFYISGLSLALVIDSKSHLCQDP*HGTWTP Trigger: TGGTGTCCATGTTCCGTGGCATGGGTCTTGACACAG...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTTCCAAAGCACCGTGGTaGTGCTTGGGGCTCAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRSKAPW*CLGLRL Trigger: TAACCTGAGCCCCAAGCAGCACCACGGTGCTTTGGA...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTTTGAGGCCAACAGCCTaGCATCCGCACACACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRLRPTA*HPHTLR Trigger: TCTCAGTGTGTGCGGATGCCAGGCTGTTGGCCTCAA...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCAAAGGTCTAGGAGCTTaGGGCCAACAGCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GQVSVLPKEKRSARNSNFKGLGA*GQQPGI Trigger: GATGCCAGGCTGTTGGCCTCAAGCTCCTAGACCTTT...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTCTCAGGTTAATCTGCTaGGTCAAGTCCTTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRLRLIC*VKSFMA Trigger: GGCCATGAAGGACTTGACTCAGCAGATTAACCTGAG...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTGTCAACCTCTGCATGTaGTCAGGGCTCAGATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRVNLCM*SGLRFA Trigger: TGCAAATCTGAGCCCTGATCACATGCAGAGGTTGAC...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCTGCCCTACCCCAAGCTaGTTCCAAAGGTCTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQVSVLPKEKRSARNSNFCPTPS*FQRSRS Trigger: GCTCCTAGACCTTTGGAACCAGCTTGGGGTAGGGCA...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATTTTCCAGTGACAGACTaGTGGTCCTTCAACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFYISGLSLALVIDSKSHFPVTD*WSFNMP Trigger: TGGCATGTTGAAGGACCACCAGTCTGTCACTGGAAA...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATCCACCCACTCACAGCTaGTTATGGTATGATCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GFYISGLSLALVIDSKSHPPTHS*LWYDQP Trigger: TGGTTGATCATACCATAACCAGCTGTGAGTGGGTGG...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | CACTCCACCCCAAATGTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTGAGCTGGAACTCGGATaGTACCAGGCCAATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSTPNVPRSAESFPCVLIELELG*YQANSS Trigger: ACTGGAATTGGCCTGGTACCATCCGAGTTCCAGCTC...AATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAACATTTGGGGTGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | ATGGTTGCAAATAACCAAAAGGACCAGAAAAGCAGCTCTAGCCAGACTCTCGGGACACAGCTGGATGGCTaGCTCATGATGCAAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: MVANNQKDQKSSSSQTLGTQLDG*LMMQNL Trigger: CAGATTTTGCATCATGAGCCAGCCATCCAGCTGTGT...CCCGAGAGTCTGGCTAGAGCTGCTTTTCTGGTCCTTTTGGTTATTTGCAACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTTGCAAATAACCAAAAGGACCAGAAAAGCAGCTCTAGCCAGACTCTCGGGTTCAGTCCCAAAGACTaGGGAGTTCCTTTTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: MVANNQKDQKSSSSQTLGFSPKD*GVPFDP Trigger: AGGATCAAAAGGAACTCCTCAGTCTTTGGGACTGAA...CCCGAGAGTCTGGCTAGAGCTGCTTTTCTGGTCCTTTTGGTTATTTGCAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | CACTCCACCCCAAATGTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTTTCCGAATGACCTTATaGGAGACATCAGCGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSTPNVPRSAESFPCVLIFRMTL*ETSASR Trigger: CCTGCTCGCTGATGTCTCTCATAAGGTCATTCGGAA...AATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAACATTTGGGGTGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTTGCGTAGTCCTTCATGGCCCTaGAGTCCTTCTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DFEIFQATPAHSWKRLLRSPSWP*SPSSSS Trigger: AGAAGATGAAGAAGGACTTCAGGGCCATGAAGGACT...ACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR GCA 90 bp | ACACTGTTATTTAAAATGACTATTTCTGCTCAGTCCCCTACCATCCATCCACCAGGGGGATCGGCAGAGTaGAGTGAAGTTGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLFKMTISAQSPTIHPPGGSAE*SEVGDR Trigger: TCTGTCTCCAACTTCACTGCACTCTGCCGATCCCCC...TGGTGGATGGATGGTAGGGGACTGAGCAGAAATAGTCATTTTAAATAACAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATAGTTGGAGACAGAGCTaGAGGCTGTGGCAGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNSWRQS*RLWQPW Trigger: CCACGGCTGCCACAGCCTCCAGCTCTGTCTCCAACT...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | GTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTGAATTTATTCAAGATCAGCTCAACCCAGGCTaGGGGGCTTATGCGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRSAESFPCVLIEFIQDQLNPG*GAYAHA Trigger: GGCATGCGCATAAGCCCCCCAGCCTGGGTTGAGCTG...ATCTTGAATAAATTCAATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATGTGCTGATTTTCTTCTaGACTACAAACACCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: GFYISGLSLALVIDSKSHVLIFF*TTNTTI Trigger: GATGGTGGTGTTTGTAGTTCAGAAGAAAATCAGCAC...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCATAGAAAAACCAAGGCAGAGAAAGTACATTCTGGCATTATGGTCAAGAGCGGGTCAGCTCATTaGTGGCTGTCTCGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRHRKTKAEKVHSGIMVKSGSAH*WLSRFV Trigger: CACAAAACGAGACAGCCAGCAATGAGCTGACCCGCT...CTTGACCATAATGCCAGAATGTACTTTCTCTGCCTTGGTTTTTCTATGCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CCA 90 bp | ACAAGGCATAGAAAAACCAAGGCAGAGAAAGTACATTCTGGCATTATGGTCAAGTCCTTTTGTACTGGCTaGAGTGGTGGGCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRKTKAEKVHSGIMVKSFCTG*SGGLES Trigger: AGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGA...CTTGACCATAATGCCAGAATGTACTTTCTCTGCCTTGGTTTTTCTATGCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATCATTCCAAAGCACCGTaGTGCTGCTTGGGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNHSKAP*CCLGLR Trigger: CCTGAGCCCCAAGCAGCACCACGGTGCTTTGGAATG...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCCACAATCTCCTGATGTaGCATCTGGAACACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQVSVLPKEKRSARNSNFHNLLM*HLEHHP Trigger: AGGGTGGTGTTCCAGATGCCACATCAGGAGATTGTG...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATCAGCTGGTTATGGTATaGTCAACCACAGTCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNQLVMV*STTVPG Trigger: CCCCGGGACTGTGGTTGATCATACCATAACCAGCTG...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | CACTCCACCCCAAATGTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTATCTGCAATCTGTGTTaGTGCAGTACCATGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HSTPNVPRSAESFPCVLIICNLC*CSTMAL Trigger: AAGTGCCATGGTACTGCAGCAACACAGATTGCAGAT...AATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAACATTTGGGGTGGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATTTGCTGCACTCGTCCTaGAAGTGCTCCTTGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHLLHSS*KCSLFC Trigger: GCAGAACAAGGAGCACTTCCAGGACGAGTGCAGCAA...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| 3UTR CAA 72 bp | TTCCAAGCAACACCAGCCCACAGCTGGAAGAGACTCTaGCGTAATCTCATTTACAGACTTTTGCAGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQATPAHSWKRL*RNLIYRLLQKN Trigger: GTTTTTCTGCAAAAGTCTGTAAATGAGATTACGCAAGAGTCTCTTCCAGCTGTGGGCTGGTGTTGCTTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTTGCAAATAACCAAAAGGACCAGAAAAGCAGCTCTAGCCAGACTCTCGGGTCGTCAGTTTTCCTCTaGCTTTTTAACTCAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: MVANNQKDQKSSSSQTLGSSVFL*LFNSTT Trigger: AGTTGTTGAGTTAAAAAGTCAGAGGAAAACTGACGA...CCCGAGAGTCTGGCTAGAGCTGCTTTTCTGGTCCTTTTGGTTATTTGCAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCACATGCCAAACCTCATaGTTTTGCATTCCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVSVLPKEKRSARNSNFTCQTS*FCIPHW Trigger: CCAGTGTGGAATGCAAAAGCATGAGGTTTGGCATGT...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | AAACAAGGCATAGAAAAACCAAGGCAGAGAAAGTACATTCTGGCATTATGGTCAAGAATCCTTTTGTACTaGCTGGAGTGGTGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQGIEKPRQRKYILALWSRILLY*LEWWAG Trigger: TCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCT...TGACCATAATGCCAGAATGTACTTTCTCTGCCTTGGTTTTTCTATGCCTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATTTATGCGCATGCCAATaGGCCCGGCAATCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHLCACQ*ARQSFP Trigger: TGGAAAAGATTGCCGGGCCCATTGGCATGCGCATAA...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATATACTTGCAAGGAGCTaGAACTCGGATGGTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHILARS*NSDGTR Trigger: CCTGGTACCATCCGAGTTCCAGCTCCTTGCAAGTAT...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATGTTTGTCCATTCCTCTaGCTATACTACTGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHVCPFL*LYYWLL Trigger: GAGCAGCCAGTAGTATAGGCAGAGGAATGGACAAAC...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATGGTGGTCCTTCAACATaGCAAACCTCATGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHGGPST*QTSCFC Trigger: GCAAAAGCATGAGGTTTGGCATGTTGAAGGACCACC...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | GTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTGAATTTATTCAAGATCAACCAGAAGCTTGCTaGACTCGTCCTGGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPRSAESFPCVLIEFIQDQPEAC*TRPGSA Trigger: AGCACTTCCAGGACGAGTGCAGCAAGCTTCTGGTTG...ATCTTGAATAAATTCAATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTTGCCAACCAGAAGCTTaGTGCACTCGTCCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFYRQIQKTSREIQKVELCQPEA*CTRPGS Trigger: ACTTCCAGGACGAGTGCAGCAAGCTTCTGGTTGGCA...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATCCAGTGACAGACTGGTaGTCCTTCAACATGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNPVTDW*SFNMPN Trigger: GTTTGGCATGTTGAAGGACCACCAGTCTGTCACTGG...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCTTCAGCAACATGCCATaGTTATTCTGTCTCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GQVSVLPKEKRSARNSNFFSNMP*LFCLSL Trigger: CAGTGAGAGACAGAATAACCATGGCATGTTGCTGAA...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATACCAGTTCTCTGGCTTaGTCCATTGCTCTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHTSSLA*SIALFG Trigger: TCCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGT...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATGAGGGATCTCGTAGTTaGCAACTGTCTTTAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNEGSRS*QLSLAG Trigger: GCCAGCTAAAGACAGTTGCCAACTACGAGATCCCTC...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | AAACAAGGCATAGAAAAACCAAGGCAGAGAAAGTACATTCTGGCATTATGGTCAAGGAAAGCTAGCTTGTaGGCATACTTGCAAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQGIEKPRQRKYILALWSRKASL*AYLQGA Trigger: AGCTCCTTGCAAGTATGCCCACAAGCTAGCTTTCCT...TGACCATAATGCCAGAATGTACTTTCTCTGCCTTGGTTTTTCTATGCCTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATATTCCACACTGGGGCTaGAAGTCACATGGTACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNIPHWG*KSHGTD Trigger: ATCAGTACCATGTGACTTTCAGCCCCAGTGTGGAAT...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | GTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTGAATTTATTCAAGATGGCTGTCTCGTTTTGTaGAATTCTCTGCAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPRSAESFPCVLIEFIQDGCLVL*NSLQQA Trigger: TGCCTGCTGCAGAGAATTTCACAAAACGAGACAGCC...ATCTTGAATAAATTCAATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATGTTGATCCTCTCCATTaGCAGAAGCCGACCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNVDPLH*QKPTFN Trigger: ATTGAAGGTCGGCTTCTGCCAATGGAGAGGATCAAC...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATAGGATCTTTGTCAGCTaGATCTTGATACTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHRIFVS*ILILIS Trigger: CGAGATCAGTATCAAGATTCAGCTGACAAAGATCCT...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATCAAACACCACCATCTTaGGGTGGTAGTTATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNQTPPS*GGSYQR Trigger: CCTTTGATAACTACCACCCCAAGATGGTGGTGTTTG...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATTTTTGTGAAATTCTCTaGAGCAGGCATTCCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHFCEIL*SRHSKA Trigger: TGCTTTGGAATGCCTGCTGCAGAGAATTTCACAAAA...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTGCTTGACTTATTTGGTAGGGGGATTTGACATGCTAAGAACATGTCATATGGTACTGATAAACTaGTTCGTTATGACACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPCLTYLVGGFDMLRTCHMVLIN*FVMTLD Trigger: ATCCAGTGTCATAACGAAGCAGTTTATCAGTACCAT...ATGACATGTTCTTAGCATGTCAAATCCCCCTACCAAATAAGTCAAGCAAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTGTCCATTGCTCTCTTTaGATAAAAGAGTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NFYRQIQKTSREIQKVELVHCSL*IKECPE Trigger: TTCTGGGCACTCTTTTATCCAAAGAGAGCAATGGAC...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR GCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATGTTCCTTTTGATCCTTaGTTGACCAAAAGCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNVPFDP*LTKSSF Trigger: AAAAGAGCTTTTGGTCAAGCAAGGATCAAAAGGAAC...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CCA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATCAATTCCAGTACATGTaGCATAGTTTGAAAGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: APQHPTMISGLKEEQKSNQFQYM*HSLKVN Trigger: GTTGACTTTCAAACTATGCCACATGTACTGGAATTG...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CAA 90 bp | AGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGGCACATACGCCCGGAAGCCTCTGCCAGTTaGCTGTCCCCAGCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLSGSQTHSPGSGGHIRPEASAS*LSPAAS Trigger: GCTGGCAGCTGGGGACAGCAAACTGGCAGAGGCTTC...CGGGCGTATGTGCCCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | TCTAGGAGCTTGAGGCCAACAGCCTGGCATCCGCACACACTGAGATaGGTGGACTGGGGTGGGCCCCCTGAACAACGGCCTGACAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SRSLRPTAWHPHTLR*VDWGGPPEQRPDRI Trigger: GATCCTGTCAGGCCGTTGTTCAGGGGGCCCACCCCAGTCCACCCATCTCAGTGTGTGCGGATGCCAGGCTGTTGGCCTCAAGCTCCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 ENSMUST00000226426.2 |
||
| CDS TCA 90 bp | GAGACAGAGCTGGAGGCTGTGGCAGCCGTGGGGGATCCCGAGCTGTaGGGCCAAAGGCACTGGGAGGTTTGTCCATTCCTCTGCCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: ETELEAVAAVGDPEL*GQRHWEVCPFLCLY Trigger: GTATAGGCAGAGGAATGGACAAACCTCCCAGTGCCTTTGGCCTCACAGCTCGGGATCCCCCACGGCTGCCACAGCCTCCAGCTCTGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGCTGCCAACCAGAAGCTaGCTGCACTCGTCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSQTLGKSDSQPWVRWLPTRS*LHSSWK Trigger: CTTCCAGGACGAGTGCAGCAAGCTTCTGGTTGGCAG...CCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS GCA 90 bp | TTTTCCTTTCGTTCCATAGTCAGGACCGGAGGGGGATCGGCAGAGTaGAGTGAAGTTGGAGACAGAGCTGGAGGCTGTGGCAGCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSFRSIVRTGGGSAE*SEVGDRAGGCGSRG Trigger: CCCACGGCTGCCACAGCCTCCAGCTCTGTCTCCAACTTCACTGCACTCTGCCGATCCCCCTCCGGTCCTGACTATGGAACGAAAGGAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGTGGGCACATACGCCCGACCTACAGAATCCTTTaGTACTGGCTGGAGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLSGSQTHSPGSGGHIRPTYRIL*YWLEWW Trigger: CCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGT...CGGGCGTATGTGCCCACCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS GCA 90 bp | CAGCGGGTCAGCTCATTGCTGGCTGTCTCGTTTTGTGAAATTCTCTaGAGCAGGCATTCCAAAGCACCGTGGTGCTGCTTGGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRVSSLLAVSFCEIL*SRHSKAPWCCLGLR Trigger: CCTGAGCCCCAAGCAGCACCACGGTGCTTTGGAATGCCTGCTGCAGAGAATTTCACAAAACGAGACAGCCAGCAATGAGCTGACCCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS TCA 90 bp | ACTGAGCCCCCAGCGGGTCAGCTCATTGCTGGCTGTCTCGTTTTGTaGAATTCTCTGCAGCAGGCATTCCAAAGCACCGTGGTGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TEPPAGQLIAGCLVL*NSLQQAFQSTVVLL Trigger: AAGCAGCACCACGGTGCTTTGGAATGCCTGCTGCAGAGAATTTCACAAAACGAGACAGCCAGCAATGAGCTGACCCGCTGGGGGCTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS GCA 90 bp | TCTACTCCAACCAACAGAAGCCTCTGCCAGTTTGCTGTCCCCAGCTaGCAGCACCGAAGGATCAGGCAAAGAGGAACGGGGTTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: STPTNRSLCQFAVPS*QHRRIRQRGTGFFS Trigger: AGAGAAGAACCCCGTTCCTCTTTGCCTGATCCTTCGGTGCTGGCAGCTGGGGACAGCAAACTGGCAGAGGCTTCTGTTGGTTGGAGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS GCA 90 bp | CTCTCCATTGGCAGAAGCCGACCTTCAATCTTGTGGACATCTTTATaGAGACTGAGCCCCCAGCGGGTCAGCTCATTGCTGGCTGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSIGRSRPSILWTSL*RLSPQRVSSLLAVS Trigger: CGAGACAGCCAGCAATGAGCTGACCCGCTGGGGGCTCAGTCTGCATAAAGATGTCCACAAGATTGAAGGTCGGCTTCTGCCAATGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | GGAACCCACCAGGCAGAGCTTCAGGCTGTCCACAATCTCCTGATGTaGCATCTGGAACACCACCCTCGAGTACCATTTGGTGAGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTHQAELQAVHNLLM*HLEHHPRVPFGECE Trigger: CTCACACTCACCAAATGGTACTCGAGGGTGGTGTTCCAGATGCCACATCAGGAGATTGTGGACAGCCTGAAGCTCTGCCTGGTGGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS TCA 90 bp | ATAGCATGCATGACATCCAGCACAGAGTCGTTCCGAATGACCTTATaGGAGACATCAGCGAGCAGGAAGAGACCCCCGTCTGTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IACMTSSTESFRMTL*ETSASRKRPPSVLR Trigger: CCGGAGGACAGACGGGGGTCTCTTCCTGCTCGCTGATGTCTCTCATAAGGTCATTCGGAACGACTCTGTGCTGGATGTCATGCATGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | CCTGATATAGGTCTCTATTCGGTCATCCTTCAGCTCAACCCAGGCTaGGGGGCTTATGCGCATGCCAATGGGCCCGGCAATCTTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PDIGLYSVILQLNPG*GAYAHANGPGNLFQ Trigger: TTGGAAAAGATTGCCGGGCCCATTGGCATGCGCATAAGCCCCCCAGCCTGGGTTGAGCTGAAGGATGACCGAATAGAGACCTATATCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CAA 90 bp | AAAAGCAGCTCTAGCCAGACTCTCGGGAAGTCAGACTCACAGCCCTGGGTCAGGGATCTGCAATCTGTGTaGCTGCAGTACCATGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KSSSSQTLGKSDSQPWVRDLQSV*LQYHGT Trigger: AGTGCCATGGTACTGCAGCAACACAGATTGCAGATC...CCTGACCCAGGGCTGTGAGTCTGACTTCCCGAGAGTCTGGCTAGAGCTGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS TCA 90 bp | TTCAAGGAACCCACCAGGCAGAGCTTCAGGCTGTCCACAATCTCCTaGTGTGGCATCTGGAACACCACCCTCGAGTACCATTTGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FKEPTRQSFRLSTIS*CGIWNTTLEYHLVS Trigger: ACTCACCAAATGGTACTCGAGGGTGGTGTTCCAGATGCCACATCAGGAGATTGTGGACAGCCTGAAGCTCTGCCTGGTGGGTTCCTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | CTGGCCACGAAGCCGACCACAGAGCGCATGCCTCTGCTGGGGTCATaGTACACATCCATTCCAATCACCATTAGTTGTTTCAGCGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LATKPTTERMPLLGS*YTSIPITISCFSGI Trigger: TATTCCGCTGAAACAACTAATGGTGATTGGAATGGATGTGTACCATGACCCCAGCAGAGGCATGCGCTCTGTGGTCGGCTTCGTGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | CTTAAGTTGATCCTCTCCATTGGCAGAAGCCGACCTTCAATCTTGTaGACATCTTTATGCAGACTGAGCCCCCAGCGGGTCAGCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LKLILSIGRSRPSIL*TSLCRLSPQRVSSL Trigger: CAATGAGCTGACCCGCTGGGGGCTCAGTCTGCATAAAGATGTCCACAAGATTGAAGGTCGGCTTCTGCCAATGGAGAGGATCAACTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | GATTTATGCTGGCCACGAAGCCGACCACAGAGCGCATGCCTCTGCTaGGGTCATGGTACACATCCATTCCAATCACCATTAGTTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLCWPRSRPQSACLC*GHGTHPFQSPLVVS Trigger: TGAAACAACTAATGGTGATTGGAATGGATGTGTACCATGACCCCAGCAGAGGCATGCGCTCTGTGGTCGGCTTCGTGGCCAGCATAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS GCA 90 bp | GCACTTCTCGTTTTGAAGGAGGCCGGAATGCTGTGTCAAGACCCATaGCACGGAACATGGACACCAAACCTACAGAATCCTTTTGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLVLKEAGMLCQDP*HGTWTPNLQNPFVL Trigger: CAGTACAAAAGGATTCTGTAGGTTTGGTGTCCATGTTCCGTGGCATGGGTCTTGACACAGCATTCCGGCCTCCTTCAAAACGAGAAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS GCA 90 bp | CCAGAAGTTTCATTACCCGCCGGAAGACAACATTGTAGAAGGGGATaGACAGGTCAGAACACGGCTCCAGGATCTTTGTCAGCTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PEVSLPAGRQHCRRG*TGQNTAPGSLSAES Trigger: AGATTCAGCTGACAAAGATCCTGGAGCCGTGTTCTGACCTGTGCATCCCCTTCTACAATGTTGTCTTCCGGCGGGTAATGAAACTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | CCACGGAACATGGACACCAAACCTACAGAATCCTTTTGTACTGGCTaGAGTGGTGGGCTGGAGTCTTCTGGTTTTCTAAACACAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRNMDTKPTESFCTG*SGGLESSGFLNTRP Trigger: AGGCCTTGTGTTTAGAAAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGTTTGGTGTCCATGTTCCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS CCA 90 bp | CATGCCACGGAACATGGACACCAAACCTACAGAATCCTTTTGTACTaGCTGGAGTGGTGGGCTGGAGTCTTCTGGTTTTCTAAACACAAG | + |
|
Preference number: 5 (lower is better) Translates to: HATEHGHQTYRILLY*LEWWAGVFWFSKHK Trigger: CTTGTGTTTAGAAAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGTTTGGTGTCCATGTTCCGTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTACATTTCAGGTCTCAGCCTGGCCTTGGTCATAGACTCCAAAAGCCATGACAGGAAAGCTAGCTaGTGGGCATACTTGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFYISGLSLALVIDSKSHDRKAS*WAYLQG Trigger: TCCTTGCAAGTATGCCCACAAGCTAGCTTTCCTGTC...ATGGCTTTTGGAGTCTATGACCAAGGCCAGGCTGAGACCTGAAATGTAAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS CCA 90 bp | AGAATAGAGCCATCAAAAGCAGTGACGTTTCCAGTGACAGACTGGTaGTCCTTCAACATGCCAAACCTCATGCTTTTGCATTCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: RIEPSKAVTFPVTDW*SFNMPNLMLLHSTL Trigger: CAGTGTGGAATGCAAAAGCATGAGGTTTGGCATGTTGAAGGACCACCAGTCTGTCACTGGAAACGTCACTGCTTTTGATGGCTCTATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAAGTATCTGTTCTACCTAAAGAGAAAAGGAGTGCTAGGAACAGCAACTTCCCAAACCTCATGCTTTaGCATTCCACACTGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQVSVLPKEKRSARNSNFPNLML*HSTLGL Trigger: CAGCCCCAGTGTGGAATGCAAAAGCATGAGGTTTGG...GAAGTTGCTGTTCCTAGCACTCCTTTTCTCTTTAGGTAGAACAGATACTTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CAA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTGCACCGTGGTGCTGCTaGGGGCTCAGGTTAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NFYRQIQKTSREIQKVELAPWCC*GLRLIC Trigger: GCAGATTAACCTGAGCCCCAAGCAGCACCACGGTGC...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCTGAAACTTTGGGATTTTGAAATTTTCCAAGCAACACCAGCCCACAGCAGCCGACCTTCAATCTaGTGGACATCTTTATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSLKLWDFEIFQATPAHSSRPSI*WTSLCR Trigger: TCTGCATAAAGATGTCCACAAGATTGAAGGTCGGCT...GCTGTGGGCTGGTGTTGCTTGGAAAATTTCAAAATCCCAAAGTTTCAGGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS GCA 90 bp | TTTGCATTCCACACTGGGGCTGAAAGTCACATGGTACTGATAAACTaGTTCGTTATGACACTGGATTTTGATGAGGTTCAGTCCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FAFHTGAESHMVLIN*FVMTLDFDEVQSQR Trigger: TCTTTGGGACTGAACCTCATCAAAATCCAGTGTCATAACGAAGCAGTTTATCAGTACCATGTGACTTTCAGCCCCAGTGTGGAATGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
||
| CDS GCA 90 bp | GGCAATCTTTTCCAACATGTTAACCAGTTCTCTGGCTTGGTCCATTaGTCTCTTTGGATAAAAGAGTGCCCAGAAATGCATGGGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: GNLFQHVNQFSGLVH*SLWIKECPEMHGNS Trigger: ACTATTCCCATGCATTTCTGGGCACTCTTTTATCCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGTTAACATGTTGGAAAAGATTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CAA 90 bp | GTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTGAATTTATTCAAGATCAAAGGTCTAGGAGCTaGAGGCCAACAGCCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VPRSAESFPCVLIEFIQDQRSRS*RPTAWH Trigger: ATGCCAGGCTGTTGGCCTCAAGCTCCTAGACCTTTG...ATCTTGAATAAATTCAATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CAA 90 bp | ACACTGTTATTTAAAATGACTATTTCTGCTCAGTCCCCTACCATCCATCCACCAGAAGTGTTCCTTAAGTaGATCCTCTCCATTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLLFKMTISAQSPTIHPPEVFLK*ILSIGR Trigger: TCTGCCAATGGAGAGGATCAACTTAAGGAACACTTC...TGGTGGATGGATGGTAGGGGACTGAGCAGAAATAGTCATTTTAAATAACAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
||
| CDS-3UTR CAA 90 bp | GTTCCTAGGTCTGCTGAATCCTTTCCATGTGTTCTAATTGAATTTATTCAAGATCTGTCTTTAGGGGTCTaGTTCCAGTCCACATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: VPRSAESFPCVLIEFIQDLSLGV*FQSTSS Trigger: CGATGATGTGGACTGGAACAAGACCCCTAAAGACAG...ATCTTGAATAAATTCAATTAGAACACATGGAAAGGATTCAGCAGACCTAGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CAA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTAACCAGTTCTCTGGCTaGGTCCATTGCTCTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: NFYRQIQKTSREIQKVELNQFSG*VHCSLW Trigger: CCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGTT...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CAA 90 bp | GCACCACAACACCCTACTATGATATCAGGGTTAAAAGAAGAACAGAAATCTAATGATCAGGGCTCAGATTaGCAGTGTTCAGAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: APQHPTMISGLKEEQKSNDQGSD*QCSEHR Trigger: TCTGTGTTCTGAACACTGCAAATCTGAGCCCTGATC...ATTAGATTTCTGTTCTTCTTTTAACCCTGATATCATAGTAGGGTGTTGTGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CAA 90 bp | AACTTCTACAGACAAATTCAAAAGACTTCCAGAGAAATCCAGAAAGTGGAACTTGATGCAAACGACCATTaGTATCTTCCCCTCAACTCC | + |
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Preference number: 5 (lower is better) Translates to: NFYRQIQKTSREIQKVELDANDH*YLPLNS Trigger: GGAGTTGAGGGGAAGATACAAATGGTCGTTTGCATC...AAGTTCCACTTTCTGGATTTCTCTGGAAGTCTTTTGAATTTGTCTGTAGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS-3UTR CAA 90 bp | AAACAAGGCATAGAAAAACCAAGGCAGAGAAAGTACATTCTGGCATTATGGTCATACATGTGGCATAGTTaGAAAGTCAACCTCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: KQGIEKPRQRKYILALWSYMWHS*KVNLCM Trigger: CATGCAGAGGTTGACTTTCAAACTATGCCACATGTA...TGACCATAATGCCAGAATGTACTTTCTCTGCCTTGGTTTTTCTATGCCTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 72 bp | TCAGGACCGGAGGGGGATCGGCAGAGTGCAGTGAAGTaGGAGACAGAGCTGGAGGCTGTGGCAGCCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGPEGDRQSAVK*ETELEAVAAVG Trigger: CCCCACGGCTGCCACAGCCTCCAGCTCTGTCTCCAACTTCACTGCACTCTGCCGATCCCCCTCCGGTCCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CCA 72 bp | ACAGCCTGGCATCCGCACACACTGAGATGGGTGGACTaGGGTGGGCCCCCTGAACAACGGCCTGACAGGATC | + |
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Preference number: 6 (lower is better) Translates to: TAWHPHTLRWVD*GGPPEQRPDRI Trigger: GATCCTGTCAGGCCGTTGTTCAGGGGGCCCACCCCAGTCCACCCATCTCAGTGTGTGCGGATGCCAGGCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 ENSMUST00000226426.2 |
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| CDS CCA 72 bp | TTGAGGCCAACAGCCTGGCATCCGCACACACTGAGATaGGTGGACTGGGGTGGGCCCCCTGAACAACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LRPTAWHPHTLR*VDWGGPPEQRP Trigger: AGGCCGTTGTTCAGGGGGCCCACCCCAGTCCACCCATCTCAGTGTGTGCGGATGCCAGGCTGTTGGCCTCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 ENSMUST00000226426.2 |
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| CDS CAA 90 bp | TGCAGGTCCTGCCCTACCCCAAGCTGGTTCCAAAGGTCTAGGAGCTaGAGGCCAACAGCCTGGCATCCGCACACACTGAGATGGGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: CRSCPTPSWFQRSRS*RPTAWHPHTLRWVD Trigger: GTCCACCCATCTCAGTGTGTGCGGATGCCAGGCTGTTGGCCTCAAGCTCCTAGACCTTTGGAACCAGCTTGGGGTAGGGCAGGACCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 ENSMUST00000226426.2 |
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| CDS GCA 72 bp | ACCAACAGAAGCCTCTGCCAGTTTGCTGTCCCCAGCTaGCAGCACCGAAGGATCAGGCAAAGAGGAACGGGG | + |
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Preference number: 6 (lower is better) Translates to: TNRSLCQFAVPS*QHRRIRQRGTG Trigger: CCCCGTTCCTCTTTGCCTGATCCTTCGGTGCTGGCAGCTGGGGACAGCAAACTGGCAGAGGCTTCTGTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CCA 72 bp | GGTCTCTATTCGGTCATCCTTCAGCTCAACCCAGGCTaGGGGGCTTATGCGCATGCCAATGGGCCCGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GLYSVILQLNPG*GAYAHANGPGN Trigger: ATTGCCGGGCCCATTGGCATGCGCATAAGCCCCCCAGCCTGGGTTGAGCTGAAGGATGACCGAATAGAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CCA 72 bp | TGGTTCCAAAGGTCTAGGAGCTTGAGGCCAACAGCCTaGCATCCGCACACACTGAGATGGGTGGACTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: WFQRSRSLRPTA*HPHTLRWVDWG Trigger: ACCCCAGTCCACCCATCTCAGTGTGTGCGGATGCCAGGCTGTTGGCCTCAAGCTCCTAGACCTTTGGAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 ENSMUST00000226426.2 |
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| CDS CCA 72 bp | GGCAGCAGCAGGATCTCGCCCTTCAGCAACATGCCATaGTTATTCTGTCTCTCACTGGGCCGGTGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSSRISPFSNMP*LFCLSLGRWIS Trigger: GCTGATCCACCGGCCCAGTGAGAGACAGAATAACCATGGCATGTTGCTGAAGGGCGAGATCCTGCTGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 72 bp | TGCCCTACCCCAAGCTGGTTCCAAAGGTCTAGGAGCTaGAGGCCAACAGCCTGGCATCCGCACACACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: CPTPSWFQRSRS*RPTAWHPHTLR Trigger: TCTCAGTGTGTGCGGATGCCAGGCTGTTGGCCTCAAGCTCCTAGACCTTTGGAACCAGCTTGGGGTAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 ENSMUST00000226426.2 |
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| CDS TCA 72 bp | CCCACCAGGCAGAGCTTCAGGCTGTCCACAATCTCCTaGTGTGGCATCTGGAACACCACCCTCGAGTACCAT | + |
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Preference number: 6 (lower is better) Translates to: PTRQSFRLSTIS*CGIWNTTLEYH Trigger: ATGGTACTCGAGGGTGGTGTTCCAGATGCCACATCAGGAGATTGTGGACAGCCTGAAGCTCTGCCTGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS GCA 72 bp | TCTTCCCAGCATTCTACTCCAACCAACAGAAGCCTCTaGCAGTTTGCTGTCCCCAGCTGCCAGCACCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SSQHSTPTNRSL*QFAVPSCQHRR Trigger: CCTTCGGTGCTGGCAGCTGGGGACAGCAAACTGGCAGAGGCTTCTGTTGGTTGGAGTAGAATGCTGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CAA 72 bp | GGATCCCGAGCTGTGAGGCCAAAGGCACTGGGAGGTTaGTCCATTCCTCTGCCTATACTACTGGCTGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GSRAVRPKALGG*SIPLPILLAAR Trigger: ACGAGCAGCCAGTAGTATAGGCAGAGGAATGGACAAACCTCCCAGTGCCTTTGGCCTCACAGCTCGGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS TCA 72 bp | GCCGACCTTCAATCTTGTGGACATCTTTATGCAGACTaGGCCCCCAGCGGGTCAGCTCATTGCTGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ADLQSCGHLYAD*APSGSAHCWLS Trigger: AGACAGCCAGCAATGAGCTGACCCGCTGGGGGCTCAGTCTGCATAAAGATGTCCACAAGATTGAAGGTCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS GCA 72 bp | GATTTATGCTGGCCACGAAGCCGACCACAGAGCGCATaGCTCTGCTGGGGTCATGGTACACATCCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: DLCWPRSRPQSA*LCWGHGTHPFQ Trigger: TTGGAATGGATGTGTACCATGACCCCAGCAGAGGCATGCGCTCTGTGGTCGGCTTCGTGGCCAGCATAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CCA 72 bp | CCTTCAGCAACATGCCATGGTTATTCTGTCTCTCACTaGGCCGGTGGATCAGCAGCGGCTGGTCATCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSATCHGYSVSH*AGGSAAAGHLP Trigger: AGGAAGATGACCAGCCGCTGCTGATCCACCGGCCCAGTGAGAGACAGAATAACCATGGCATGTTGCTGAAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CCA 72 bp | CTTTTGTACTGGCTGGAGTGGTGGGCTGGAGTCTTCTaGTTTTCTAAACACAAGGCCTCTGCCTGCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLYWLEWWAGVF*FSKHKASACRS Trigger: GGACCTGCAGGCAGAGGCCTTGTGTTTAGAAAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CCA 72 bp | ATCCTCTCCATTGGCAGAAGCCGACCTTCAATCTTGTaGACATCTTTATGCAGACTGAGCCCCCAGCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ILSIGRSRPSIL*TSLCRLSPQRV Trigger: GACCCGCTGGGGGCTCAGTCTGCATAAAGATGTCCACAAGATTGAAGGTCGGCTTCTGCCAATGGAGAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 72 bp | GCCACGGAACATGGACACCAAACCTACAGAATCCTTTaGTACTGGCTGGAGTGGTGGGCTGGAGTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ATEHGHQTYRIL*YWLEWWAGVFW Trigger: CCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGTTTGGTGTCCATGTTCCGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS TCA 72 bp | ATGACATCCAGCACAGAGTCGTTCCGAATGACCTTATaGGAGACATCAGCGAGCAGGAAGAGACCCCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: MTSSTESFRMTL*ETSASRKRPPS Trigger: AGACGGGGGTCTCTTCCTGCTCGCTGATGTCTCTCATAAGGTCATTCGGAACGACTCTGTGCTGGATGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 72 bp | TTGATCCTCTCCATTGGCAGAAGCCGACCTTCAATCTaGTGGACATCTTTATGCAGACTGAGCCCCCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: LILSIGRSRPSI*WTSLCRLSPQR Trigger: CCGCTGGGGGCTCAGTCTGCATAAAGATGTCCACAAGATTGAAGGTCGGCTTCTGCCAATGGAGAGGATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 90 bp | TTCCTTAAGTTGATCCTCTCCATTGGCAGAAGCCGACCTTCAATCTaGTGGACATCTTTATGCAGACTGAGCCCCCAGCGGGTCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FLKLILSIGRSRPSI*WTSLCRLSPQRVSS Trigger: TGAGCTGACCCGCTGGGGGCTCAGTCTGCATAAAGATGTCCACAAGATTGAAGGTCGGCTTCTGCCAATGGAGAGGATCAACTTAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS GCA 72 bp | TCATTACCCGCCGGAAGACAACATTGTAGAAGGGGATaGACAGGTCAGAACACGGCTCCAGGATCTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SLPAGRQHCRRG*TGQNTAPGSLS Trigger: TGACAAAGATCCTGGAGCCGTGTTCTGACCTGTGCATCCCCTTCTACAATGTTGTCTTCCGGCGGGTAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CCA 72 bp | GCCGGAATGCTGTGTCAAGACCCATGCCACGGAACATaGACACCAAACCTACAGAATCCTTTTGTACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGMLCQDPCHGT*TPNLQNPFVLA Trigger: AGCCAGTACAAAAGGATTCTGTAGGTTTGGTGTCCATGTTCCGTGGCATGGGTCTTGACACAGCATTCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CCA 72 bp | AAGCCGACCACAGAGCGCATGCCTCTGCTGGGGTCATaGTACACATCCATTCCAATCACCATTAGTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: KPTTERMPLLGS*YTSIPITISCF Trigger: GAAACAACTAATGGTGATTGGAATGGATGTGTACCATGACCCCAGCAGAGGCATGCGCTCTGTGGTCGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 72 bp | GACTGGTGGTCCTTCAACATGCCAAACCTCATGCTTTaGCATTCCACACTGGGGCTGAAAGTCACATGGTAC | + |
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Preference number: 6 (lower is better) Translates to: DWWSFNMPNLML*HSTLGLKVTWY Trigger: GTACCATGTGACTTTCAGCCCCAGTGTGGAATGCAAAAGCATGAGGTTTGGCATGTTGAAGGACCACCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CAA 90 bp | AAGACCCATGCCACGGAACATGGACACCAAACCTACAGAATCCTTTaGTACTGGCTGGAGTGGTGGGCTGGAGTCTTCTGGTTTTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KTHATEHGHQTYRIL*YWLEWWAGVFWFSK Trigger: TTTAGAAAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGTTTGGTGTCCATGTTCCGTGGCATGGGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS TCA 72 bp | CACAGGTCAGAACACGGCTCCAGGATCTTTGTCAGCTaGATCTTGATACTGATCTCGGCATCGTCAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HRSEHGSRIFVS*ILILISASSVF Trigger: GAAAACTGACGATGCCGAGATCAGTATCAAGATTCAGCTGACAAAGATCCTGGAGCCGTGTTCTGACCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CCA 72 bp | CAAACCTACAGAATCCTTTTGTACTGGCTGGAGTGGTaGGCTGGAGTCTTCTGGTTTTCTAAACACAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QTYRILLYWLEW*AGVFWFSKHKA Trigger: GGCCTTGTGTTTAGAAAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CCA 72 bp | GAGCCATCAAAAGCAGTGACGTTTCCAGTGACAGACTaGTGGTCCTTCAACATGCCAAACCTCATGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EPSKAVTFPVTD*WSFNMPNLMLL Trigger: CAAAAGCATGAGGTTTGGCATGTTGAAGGACCACCAGTCTGTCACTGGAAACGTCACTGCTTTTGATGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CCA 72 bp | CTTCAAAACACTTCTGCAGCTGAGGGATCTCGTAGTTaGCAACTGTCTTTAGCTGGCCATCAGACACTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LQNTSAAEGSRS*QLSLAGHQTLH Trigger: ATGGAGTGTCTGATGGCCAGCTAAAGACAGTTGCCAACTACGAGATCCCTCAGCTGCAGAAGTGTTTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 90 bp | ACCCAGTTCAGGTCCTCCGATGTGACAAATGAAGTGTTCCTTAAGTaGATCCTCTCCATTGGCAGAAGCCGACCTTCAATCTTGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TQFRSSDVTNEVFLK*ILSIGRSRPSILWT Trigger: TGTCCACAAGATTGAAGGTCGGCTTCTGCCAATGGAGAGGATCAACTTAAGGAACACTTCATTTGTCACATCGGAGGACCTGAACTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS TCA 72 bp | TGGTACCAGGCCAATTCCAGTACATGTGGCATAGTTTaGAAGTCAACCTCTGCATGTGATCAGGGCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WYQANSSTCGIV*KSTSACDQGSD Trigger: ATCTGAGCCCTGATCACATGCAGAGGTTGACTTTCAAACTATGCCACATGTACTGGAATTGGCCTGGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CCA 72 bp | ATGGACACCAAACCTACAGAATCCTTTTGTACTGGCTaGAGTGGTGGGCTGGAGTCTTCTGGTTTTCTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: MDTKPTESFCTG*SGGLESSGFLN Trigger: GTTTAGAAAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGTTTGGTGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CCA 72 bp | CCATCAAAAGCAGTGACGTTTCCAGTGACAGACTGGTaGTCCTTCAACATGCCAAACCTCATGCTTTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PSKAVTFPVTDW*SFNMPNLMLLH Trigger: ATGCAAAAGCATGAGGTTTGGCATGTTGAAGGACCACCAGTCTGTCACTGGAAACGTCACTGCTTTTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS CAA 72 bp | AGGTCCTCCGATGTGACAAATGAAGTGTTCCTTAAGTaGATCCTCTCCATTGGCAGAAGCCGACCTTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: RSSDVTNEVFLK*ILSIGRSRPSI Trigger: GATTGAAGGTCGGCTTCTGCCAATGGAGAGGATCAACTTAAGGAACACTTCATTTGTCACATCGGAGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 90 bp | AATGGGCCCGGCAATCTTTTCCAACATGTTAACCAGTTCTCTGGCTaGGTCCATTGCTCTCTTTGGATAAAAGAGTGCCCAGAAATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NGPGNLFQHVNQFSG*VHCSLWIKECPEMH Trigger: ATGCATTTCTGGGCACTCTTTTATCCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGTTAACATGTTGGAAAAGATTGCCGGGCCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS GCA 72 bp | CACACTGGGGCTGAAAGTCACATGGTACTGATAAACTaGTTCGTTATGACACTGGATTTTGATGAGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HTGAESHMVLIN*FVMTLDFDEVQ Trigger: CTGAACCTCATCAAAATCCAGTGTCATAACGAAGCAGTTTATCAGTACCATGTGACTTTCAGCCCCAGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048129.6 ENSMUST00000226229.2 |
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| CDS GCA 72 bp | GAAAGTCAACCTCTGCATGTGATCAGGGCTCAGATTTaGAGTGTTCAGAACACAGATGTAGTGTGTAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ESQPLHVIRAQI*SVQNTDVVCRY Trigger: ATACCTACACACTACATCTGTGTTCTGAACACTGCAAATCTGAGCCCTGATCACATGCAGAGGTTGACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CCA 72 bp | GTTAACCAGTTCTCTGGCTTGGTCCATTGCTCTCTTTaGATAAAAGAGTGCCCAGAAATGCATGGGAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: VNQFSGLVHCSL*IKECPEMHGNS Trigger: ACTATTCCCATGCATTTCTGGGCACTCTTTTATCCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS CAA 72 bp | GGCAATCTTTTCCAACATGTTAACCAGTTCTCTGGCTaGGTCCATTGCTCTCTTTGGATAAAAGAGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GNLFQHVNQFSG*VHCSLWIKECP Trigger: TGGGCACTCTTTTATCCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGTTAACATGTTGGAAAAGATTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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| CDS GCA 72 bp | TTCCAACATGTTAACCAGTTCTCTGGCTTGGTCCATTaGTCTCTTTGGATAAAAGAGTGCCCAGAAATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FQHVNQFSGLVH*SLWIKECPEMH Trigger: ATGCATTTCTGGGCACTCTTTTATCCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGTTAACATGTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048129.6 |
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