Pregenerated sensors for PITX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028023Ensembl transcript IDs: ENSMUST00000029657.16, ENSMUST00000042587.12, ENSMUST00000106382.11, ENSMUST00000172645.8, ENSMUST00000173645.4, ENSMUST00000174623.3, ENSMUST00000174661.9
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCGCCGGATGGGCCGGCAGAGAGCCGCTGAGGTTGTAGGCGCCTaGGCCAGGCGGCAGCTCTGCCTGGGAACCGGGAGCAGTAACCTC | + |
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Preference number: 1 (lower is better) Translates to: GRRMGRQRAAEVVGA*ARRQLCLGTGSSNL Trigger: GAGGTTACTGCTCCCGGTTCCCAGGCAGAGCTGCCGCCTGGCGCAGGCGCCTACAACCTCAGCGGCTCTCTGCCGGCCCATCCGGCGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR GCA 90 bp | CTCGGATCCCCGCGCCCTGGGCGCGGTTCACACCGGCCGGTCGACTaGATACTGGCAAGCACTCAGGTTGGAGGCCGGGTTCTGCACGCT | + |
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Preference number: 1 (lower is better) Translates to: LGSPRPGRGSHRPVD*ILASTQVGGRVLHA Trigger: AGCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTGTGAACCGCGCCCAGGGCGCGGGGATCCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR GCA 90 bp | CAGAGAGCCGCTGAGGTTGTAGGCGCCTGCGCCAGGCGGCAGCTCTaGCTGGGAACCGGGAGCAGTAACCTCGGGCACACTCGCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: QRAAEVVGACARRQL*LGTGSSNLGHTRSL Trigger: CAGGGAGCGAGTGTGCCCGAGGTTACTGCTCCCGGTTCCCAGGCAGAGCTGCCGCCTGGCGCAGGCGCCTACAACCTCAGCGGCTCTCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR CCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTaGGCGCGGTTCACACCGGCCGGTCGACTGCATACTGGCAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: WGRVAHSDSPRIPAP*ARFTPAGRLHTGKH Trigger: GTGCTTGCCAGTATGCAGTCGACCGGCCGGTGTGAACCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR TCA 90 bp | GGCGCTTGTCTGGCGACGGTAAGCCGGGAACACAATGCCCTTTGCTaGGGAATGCCCGCGCAGCTTAGCTTGGGAGGGCGCCGGATGGGC | + |
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Preference number: 1 (lower is better) Translates to: GACLATVSREHNALC*GMPAQLSLGGRRMG Trigger: GCCCATCCGGCGCCCTCCCAAGCTAAGCTGCGCGGGCATTCCTCAGCAAAGGGCATTGTGTTCCCGGCTTACCGTCGCCAGACAAGCGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR CCA 90 bp | CGGTTCACACCGGCCGGTCGACTGCATACTGGCAAGCACTCAGGTTaGAGGCCGGGTTCTGCACGCTGGCGTAGCCGAAGCTGGAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RFTPAGRLHTGKHSG*RPGSARWRSRSWSA Trigger: AGCACTCCAGCTTCGGCTACGCCAGCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTGTGAACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR GCA 90 bp | GCGCACGACCTTCTAGCACAATTCTCAGTCTTTCTGGGGCAGAGTTaGCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGTT | + |
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Preference number: 1 (lower is better) Translates to: AHDLLAQFSVFLGQS*PLRQSSDPRALGAV Trigger: AACCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCTAGAAGGTCGTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CCA 90 bp | TATAAACGTACGGAGGAGTCGGCGGCGCGTAAGGACAGGCGGGCGTaGGCACCGCGGAATTCAGCGACGGGCTGCTCAGGTTGTTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: YKRTEESAARKDRRA*APRNSATGCSGCSS Trigger: ACTTGAACAACCTGAGCAGCCCGTCGCTGAATTCCGCGGTGCCCACGCCCGCCTGTCCTTACGCGCCGCCGACTCCTCCGTACGTTTATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR TCA 90 bp | AATTCAGCGACGGGCTGCTCAGGTTGTTCAAGTTATTCAGGCTATTaGGGCTGGAGCCCGGGACGCCGGTCACCGCGGAGGGCACCATGC | + |
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Preference number: 1 (lower is better) Translates to: NSATGCSGCSSYSGY*GWSPGRRSPRRAPC Trigger: GCATGGTGCCCTCCGCGGTGACCGGCGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACTTGAACAACCTGAGCAGCCCGTCGCTGAATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CCA 90 bp | CTGCATACTGGCAAGCACTCAGGTTGGAGGCCGGGTTCTGCACGCTaGCGTAGCCGAAGCTGGAGTGCTGCTTTGCTTTCAGTCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LHTGKHSGWRPGSAR*RSRSWSAALLSVSG Trigger: GCCTGAGACTGAAAGCAAAGCAGCACTCCAGCTTCGGCTACGCCAGCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCAGTATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CCA 90 bp | ACAGGTTGGAGCCTGTTCACAGCTCCTGGCGGGGAGGGATTTTATTaGCGCTTGTCTGGCGACGGTAAGCCGGGAACACAATGCCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: TGWSLFTAPGGEGFY*RLSGDGKPGTQCPL Trigger: CAAAGGGCATTGTGTTCCCGGCTTACCGTCGCCAGACAAGCGCCAATAAAATCCCTCCCCGCCAGGAGCTGTGAACAGGCTCCAACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR TCA 90 bp | CAAGGGAGAAAAGGCTGGGCCGGGCTAGGCGCGAAGGTTCTCCAGTaGAGCCAAGCCTTGCGTGTTTCTGGAGGGTTTTCTTGTTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: QGRKGWAGLGAKVLQ*SQALRVSGGFSCSR Trigger: CCTAGAACAAGAAAACCCTCCAGAAACACGCAAGGCTTGGCTTCACTGGAGAACCTTCGCGCCTAGCCCGGCCCAGCCTTTTCTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR CCA 90 bp | GTCCTCCAACTGTTGGGAATACTCTTAGCGAAAGACGTAGACACTTaGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGAATTCA | + |
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Preference number: 1 (lower is better) Translates to: VLQLLGILLAKDVDT*GHSFEIKGALSLNS Trigger: TGAATTCAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAGAGTATTCCCAACAGTTGGAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR CCA 90 bp | CTGAAAAGTAAAACAATAATATCGTACGAAATGTTATACACAGGATaGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: LKSKTIISYEMLYTG*VVHSSFRNKASTRE Trigger: TTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTATTGTTTTACTTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR CAA 90 bp | CAGGCGGGCGTGGGCACCGCGGAATTCAGCGACGGGCTGCTCAGGTaGTTCAAGTTATTCAGGCTATTGAGGCTGGAGCCCGGGACGCCG | + |
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Preference number: 2 (lower is better) Translates to: QAGVGTAEFSDGLLR*FKLFRLLRLEPGTP Trigger: CGGCGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACTTGAACAACCTGAGCAGCCCGTCGCTGAATTCCGCGGTGCCCACGCCCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CAA 90 bp | TGCGCACGACCTTCTAGCACAATTCTCAGTCTTTCTGGGGCAGAGTaGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGT | + |
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Preference number: 2 (lower is better) Translates to: CARPSSTILSLSGAE*PTPTVLGSPRPGRG Trigger: ACCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCTAGAAGGTCGTGCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR CAA 90 bp | GAATTCAGCGACGGGCTGCTCAGGTTGTTCAAGTTATTCAGGCTATaGAGGCTGGAGCCCGGGACGCCGGTCACCGCGGAGGGCACCATG | + |
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Preference number: 2 (lower is better) Translates to: EFSDGLLRLFKLFRL*RLEPGTPVTAEGTM Trigger: CATGGTGCCCTCCGCGGTGACCGGCGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACTTGAACAACCTGAGCAGCCCGTCGCTGAATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTCTAGGAGCACAGGTTGGAGCCTGTTCACAGCTCCTGGCGGGGAGGGATCACGTCCTTAAGGGGTaGCCCTGCCTTCCACCCACC | + |
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Preference number: 2 (lower is better) Translates to: LVLGAQVGACSQLLAGRDHVLKG*PCLPPT Trigger: GGTGGGTGGAAGGCAGGGTCACCCCTTAAGGACGTG...ATCCCTCCCCGCCAGGAGCTGTGAACAGGCTCCAACCTGTGCTCCTAGAACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGCGCGGTTCACACCGGCCGGTCGACTGCATACTGGCAAGCACTCAGGTTCCGAAGCTGGAGTGCTaGTTTGCTTTCAGTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PGRGSHRPVDCILASTQVPKLEC*FAFSLR Trigger: CCTGAGACTGAAAGCAAAGCAGCACTCCAGCTTCGG...AACCTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTGTGAACCGCGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CAA 90 bp | TGGAGCCTGTTCACAGCTCCTGGCGGGGAGGGATTTTATTGGCGCTaGTCTGGCGACGGTAAGCCGGGAACACAATGCCCTTTGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WSLFTAPGGEGFYWR*SGDGKPGTQCPLLR Trigger: CCTCAGCAAAGGGCATTGTGTTCCCGGCTTACCGTCGCCAGACAAGCGCCAATAAAATCCCTCCCCGCCAGGAGCTGTGAACAGGCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGAAGGACAGGCGGGCGTaGGCACCGCGGAATTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: SQTFVGVRVLQLLGILLAKDRRA*APRNSA Trigger: CGCTGAATTCCGCGGTGCCCACGCCCGCCTGTCCTT...CGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CAA 90 bp | GTCATATCCAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTaGGGAATACTCTTAGCGAAAGACGTAGACACTTGGGGACATTCC | + |
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Preference number: 2 (lower is better) Translates to: VISSQTFVGVRVLQL*GILLAKDVDTWGHS Trigger: GGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTGGATATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR-3UTR TCA 90 bp | CGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGAGTTATTCAGGCTATTaGGGCTGGAGCCCGGGACGC | + |
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Preference number: 2 (lower is better) Translates to: RTKCYTQDGSYIAVSETRSYSGY*GWSPGR Trigger: GCGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACT...CCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGGGTGTGAGCACAGCCTTCACTGAGCTGAACTTTCTTGAGAAGATAAATAGTGAAGCCAAGCCTTaGGTGTTTCTGGAGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: ARGVSTAFTELNFLEKINSEAKP*VFLEGF Trigger: AAAACCCTCCAGAAACACGCAAGGCTTGGCTTCACT...ATTTATCTTCTCAAGAAAGTTCAGCTCAGTGAAGGCTGTGCTCACACCCCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR-3UTR CCA 90 bp | CGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGTGGCGTAGCCGAAGCTaGAGTGCTGCTTTGCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: RTKCYTQDGSYIAVSETRWRSRS*SAALLS Trigger: TGAAAGCAAAGCAGCACTCCAGCTTCGGCTACGCCA...CCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGAGCACAGCCTTCACTGAGCTGAACTTTCTTGAGAAGATAAATAAACCAAGAAATCTGAATGGCTaGAAAACCCGCCCCGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: GVSTAFTELNFLEKINKPRNLNG*KTRPGK Trigger: TTTACCGGGGCGGGTTTTTCAGCCATTCAGATTTCT...TGGTTTATTTATCTTCTCAAGAAAGTTCAGCTCAGTGAAGGCTGTGCTCACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR-3UTR CCA 90 bp | TATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAATTCTCAGTCTTTCTaGGGCAGAGTTGCCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: YRTKCYTQDGSYIAVSETNSQSF*GRVAHS Trigger: GGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATT...TGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR-3UTR CCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAATTCTCAGTCTTTCTaGGGCAGAGTTGCCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: IISYEMLYTGWVVHSSFRNSQSF*GRVAHS Trigger: GGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATT...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR-3UTR CCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAAAGACGTAGACACTTaGGGACATTCCTTTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: IISYEMLYTGWVVHSSFRKDVDT*GHSFEI Trigger: GATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTT...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR GCA 72 bp | ATGGGCCGGCAGAGAGCCGCTGAGGTTGTAGGCGCCTaGGCCAGGCGGCAGCTCTGCCTGGGAACCGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: MGRQRAAEVVGA*ARRQLCLGTGS Trigger: GCTCCCGGTTCCCAGGCAGAGCTGCCGCCTGGCGCAGGCGCCTACAACCTCAGCGGCTCTCTGCCGGCCCAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR CCA 72 bp | ACGGAGGAGTCGGCGGCGCGTAAGGACAGGCGGGCGTaGGCACCGCGGAATTCAGCGACGGGCTGCTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: TEESAARKDRRA*APRNSATGCSG Trigger: ACCTGAGCAGCCCGTCGCTGAATTCCGCGGTGCCCACGCCCGCCTGTCCTTACGCGCCGCCGACTCCTCCGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR GCA 72 bp | CCGCGCCCTGGGCGCGGTTCACACCGGCCGGTCGACTaGATACTGGCAAGCACTCAGGTTGGAGGCCGGGTT | + |
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Preference number: 3 (lower is better) Translates to: PRPGRGSHRPVD*ILASTQVGGRV Trigger: AACCCGGCCTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTGTGAACCGCGCCCAGGGCGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR GCA 72 bp | GCTGAGGTTGTAGGCGCCTGCGCCAGGCGGCAGCTCTaGCTGGGAACCGGGAGCAGTAACCTCGGGCACACT | + |
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Preference number: 3 (lower is better) Translates to: AEVVGACARRQL*LGTGSSNLGHT Trigger: AGTGTGCCCGAGGTTACTGCTCCCGGTTCCCAGGCAGAGCTGCCGCCTGGCGCAGGCGCCTACAACCTCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR CCA 72 bp | CCGGCCGGTCGACTGCATACTGGCAAGCACTCAGGTTaGAGGCCGGGTTCTGCACGCTGGCGTAGCCGAAGC | + |
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Preference number: 3 (lower is better) Translates to: PAGRLHTGKHSG*RPGSARWRSRS Trigger: GCTTCGGCTACGCCAGCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CCA 72 bp | CTGGGCGCGGTTCACACCGGCCGGTCGACTGCATACTaGCAAGCACTCAGGTTGGAGGCCGGGTTCTGCACG | + |
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Preference number: 3 (lower is better) Translates to: LGAVHTGRSTAY*QALRLEAGFCT Trigger: CGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTGTGAACCGCGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR TCA 72 bp | CTGGCGACGGTAAGCCGGGAACACAATGCCCTTTGCTaGGGAATGCCCGCGCAGCTTAGCTTGGGAGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: LATVSREHNALC*GMPAQLSLGGR Trigger: GCGCCCTCCCAAGCTAAGCTGCGCGGGCATTCCTCAGCAAAGGGCATTGTGTTCCCGGCTTACCGTCGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGAAGTTATTCAGGCTATaGAGGCTGGAGCCCGGGACG | + |
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Preference number: 3 (lower is better) Translates to: SFWGRVAHSDSPRIPAPWKLFRL*RLEPGT Trigger: CGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACTT...CCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR-3UTR CAA 90 bp | CACCGGCCGGTCGACTGCATACTGGCAAGCACTCAGGTTGGAGGCCGGGTTCTGAGCTGGAGTGCTGCTTaGCTTTCAGTCTCAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: HRPVDCILASTQVGGRVLSWSAA*LSVSGW Trigger: CCAGCCTGAGACTGAAAGCAAAGCAGCACTCCAGCT...CAGAACCCGGCCTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR CCA 72 bp | GGCAAGCACTCAGGTTGGAGGCCGGGTTCTGCACGCTaGCGTAGCCGAAGCTGGAGTGCTGCTTTGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: GKHSGWRPGSAR*RSRSWSAALLS Trigger: TGAAAGCAAAGCAGCACTCCAGCTTCGGCTACGCCAGCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR GCA 72 bp | CTTCTAGCACAATTCTCAGTCTTTCTGGGGCAGAGTTaGCCACTCCGACAGTCCTCGGATCCCCGCGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LLAQFSVFLGQS*PLRQSSDPRAL Trigger: CAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCTAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR TCA 72 bp | AAAGGCTGGGCCGGGCTAGGCGCGAAGGTTCTCCAGTaGAGCCAAGCCTTGCGTGTTTCTGGAGGGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: KGWAGLGAKVLQ*SQALRVSGGFS Trigger: AGAAAACCCTCCAGAAACACGCAAGGCTTGGCTTCACTGGAGAACCTTCGCGCCTAGCCCGGCCCAGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR CCA 72 bp | AGCCTGTTCACAGCTCCTGGCGGGGAGGGATTTTATTaGCGCTTGTCTGGCGACGGTAAGCCGGGAACACAA | + |
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Preference number: 3 (lower is better) Translates to: SLFTAPGGEGFY*RLSGDGKPGTQ Trigger: TTGTGTTCCCGGCTTACCGTCGCCAGACAAGCGCCAATAAAATCCCTCCCCGCCAGGAGCTGTGAACAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR-3UTR CAA 90 bp | GGTGTGAGCACAGCCTTCACTGAGCTGAACTTTCTTGAGAAGATAAATAAACCACCCGCGCAGCTTAGCTaGGGAGGGCGCCGGATGGGC | + |
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Preference number: 3 (lower is better) Translates to: GVSTAFTELNFLEKINKPPAQLS*GGRRMG Trigger: GCCCATCCGGCGCCCTCCCAAGCTAAGCTGCGCGGG...TGGTTTATTTATCTTCTCAAGAAAGTTCAGCTCAGTGAAGGCTGTGCTCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| 3UTR-3UTR CAA 90 bp | ACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCTTGACGTTCATGGAGTaGAAGAAGGGGAAGCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: TILSLSGAELPTPTVLGSLTFME*KKGKLL Trigger: CAAGAGCTTCCCCTTCTTCAACTCCATGAACGTCAA...GGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| 3UTR-3UTR CAA 90 bp | ACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAAATATCCAGTCAAACATTaGTGGGCGTACGCGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: TQDGSYIAVSETRHPPEKYPVKH*WAYASS Trigger: GGAGGACGCGTACGCCCACAAATGTTTGACTGGATA...TTTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR CCA 72 bp | CTGTTGGGAATACTCTTAGCGAAAGACGTAGACACTTaGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLGILLAKDVDT*GHSFEIKGALS Trigger: AGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAGAGTATTCCCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| 3UTR-3UTR CAA 90 bp | TACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCAGACGGGCTGCTCAGGTaGTTCAAGTTATTCAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: YEMLYTGWVVHSSFRNKADGLLR*FKLFRL Trigger: TAGCCTGAATAACTTGAACAACCTGAGCAGCCCGTC...TGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
||
| 3UTR TCA 72 bp | CTTAGCGAAAGACGTAGACACTTGGGGACATTCCTTTaGAATCAAAGGCGCTCTCTCTTTGAATTCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSERRRHLGTFL*NQRRSLFEFSG Trigger: ACCACTGAATTCAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAGTATATACATTCCTTaGCTCGCAAGCGAAAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: IISYEMLYTGWVVHSSFRSIYIP*LASEKS Trigger: GGATTTTTCGCTTGCGAGCAAAGGAATGTATATACT...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| 3UTR CCA 72 bp | AAAACAATAATATCGTACGAAATGTTATACACAGGATaGGTCGTACATAGCAGTTTCAGAAACAAGGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: KTIISYEMLYTG*VVHSSFRNKAS Trigger: GGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTATTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGTCATTGGCGCCGGGGTaGTGCCGCGGGAACAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WGRVAHSDSPRIPAPWARSLAPG*CRGNSL Trigger: CAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGA...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGAAGGACAGGCGGGCGTaGGCACCGCGGAATTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WGRVAHSDSPRIPAPWARKDRRA*APRNSA Trigger: CGCTGAATTCCGCGGTGCCCACGCCCGCCTGTCCTT...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGGGCAAGCACTCAGGTTaGAGGCCGGGTTCTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: WGRVAHSDSPRIPAPWARGKHSG*RPGSAR Trigger: GCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCC...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGCGCCTGCGCCAGGCGGCAGCTCTGCCTGGGAACCGGGAGCAGTAACCTCGCAGGCTCTGATTCTTaGCAAGGCCTCGGCCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGACARRQLCLGTGSSNLAGSDS*QGLGPL Trigger: GAGGGGGCCGAGGCCTTGCCAAGAATCAGAGCCTGC...GAGGTTACTGCTCCCGGTTCCCAGGCAGAGCTGCCGCCTGGCGCAGGCGCCTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGAGAAGGGGAAGCTCTTaGTGGACAGAGACGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: WGRVAHSDSPRIPAPWARRRGSS*WTETLT Trigger: CGTCAGCGTCTCTGTCCACCAAGAGCTTCCCCTTCT...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGCGGTCGACTGCATACTaGCAAGCACTCAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGRVAHSDSPRIPAPWARRSTAY*QALRLE Trigger: CTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCG...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGCGCCTGCGCCAGGCGGCAGCTCTGCCTGGGAACCGGGAGCAGTAACCTCCTAGGACCGAAGCCATaGCTAACGCCTGGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGACARRQLCLGTGSSNLLGPKP*LTPGDG Trigger: ACCATCCCCAGGCGTTAGCCATGGCTTCGGTCCTAG...GAGGTTACTGCTCCCGGTTCCCAGGCAGAGCTGCCGCCTGGCGCAGGCGCCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGGCGAGTGGACATGTCTaGGTAGCGGTTTCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGRVAHSDSPRIPAPWARASGHV*VAVSLE Trigger: TTCCAGAGAAACCGCTACCCAGACATGTCCACTCGC...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCAAGGACAGGCGGGCGTaGGCACCGCGGAATTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVFLGQSCPLRQSSDPRAKDRRA*APRNSA Trigger: CGCTGAATTCCGCGGTGCCCACGCCCGCCTGTCCTT...GGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGAACGCCTGGGGATGGTaGCAGAAGGGTGAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQSFWGRVAHSDSPRIPANAWGW*QKGEEA Trigger: CGCCTCCTCACCCTTCTGTCACCATCCCCAGGCGTT...CGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042587.12 |
||
| CDS-3UTR TCA 90 bp | TCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCACAGAGACGCTGACGTaGGGCCCTTGGCAGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVFLGQSCPLRQSSDPRATETLT*GPWQPN Trigger: ATTGGGCTGCCAAGGGCCTCACGTCAGCGTCTCTGT...GGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | GGTTTTCTTGTTCTAGGAGCACAGGTTGGAGCCTGTTCACAGCTCCTGGCGGGGGTCCCGGCTGCTCGGTaGTCCAAGGGCAGCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLVLGAQVGACSQLLAGVPAAR*SKGSGP Trigger: AGGCCCGCTGCCCTTGGAGCACCGAGCAGCCGGGAC...CCCCGCCAGGAGCTGTGAACAGGCTCCAACCTGTGCTCCTAGAACAAGAAAACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGGGCAAGCACTCAGGTTaGAGGCCGGGTTCTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSFWGRVAHSDSPRIPAGKHSG*RPGSAR Trigger: GCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCC...CGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGACAGAGACGCTGACGTaGGGCCCTTGGCAGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQSFWGRVAHSDSPRIPATETLT*GPWQPN Trigger: ATTGGGCTGCCAAGGGCCTCACGTCAGCGTCTCTGT...CGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGGCAAGCACTCAGGTTaGAGGCCGGGTTCTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRGKHSG*RPGSAR Trigger: GCGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCC...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR TCA 90 bp | CACTCGCTCCCTGGAGGCCTTCGGCCCTTTCTTCTTCTAAAGCGACTTCCCACCAACGCCTGGGGATGGTaGCAGAAGGGTGAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSLPGGLRPFLLLKRLPTNAWGW*QKGEEA Trigger: CGCCTCCTCACCCTTCTGTCACCATCCCCAGGCGTT...GGTGGGAAGTCGCTTTAGAAGAAGAAAGGGCCGAAGGCCTCCAGGGAGCGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCCCTATAAACGTACGGAGGAGTCGGCGGCGCGTAAGGACAGGCGGGCGGCTCGGCCTGCTGGTTaGGTTCCCGCTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: MCPYKRTEESAARKDRRAARPAG*VPAFSI Trigger: AATGGAGAAAGCGGGAACGCAACCAGCAGGCCGAGC...CGCCCGCCTGTCCTTACGCGCCGCCGACTCCTCCGTACGTTTATAGGGACACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGATGAGCCCGTTGAACTaGGGCCCAAAGCCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFWGRVAHSDSPRIPAPWMSPLN*GPKPFL Trigger: CAAGAATGGCTTTGGGCCGCAGTTCAACGGGCTCAT...CCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | CACTCGCTCCCTGGAGGCCTTCGGCCCTTTCTTCTTCTAAAGCGACTTCCCACCCAGCTTAGTCCCGGCTaGTCGGTGCTCCAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLPGGLRPFLLLKRLPTQLSPG*SVLQGQ Trigger: CTGCCCTTGGAGCACCGAGCAGCCGGGACTAAGCTG...GGTGGGAAGTCGCTTTAGAAGAAGAAAGGGCCGAAGGCCTCCAGGGAGCGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGGCGACGGTAAGCCGGGAACACAATGCCCTTTGCTGAGGAATGCCCGCGTCCTCTGCCGGCGTTaGCGCTTCTTCTTGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGDGKPGTQCPLLRNARVLCRR*RFFLDG Trigger: CCCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGAC...GCGGGCATTCCTCAGCAAAGGGCATTGTGTTCCCGGCTTACCGTCGCCAGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGCCGAAGCTGGAGTGCTaGTTTGCTTTCAGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFWGRVAHSDSPRIPAPWPKLEC*FAFSLR Trigger: CCTGAGACTGAAAGCAAAGCAGCACTCCAGCTTCGG...CCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | CACTCGCTCCCTGGAGGCCTTCGGCCCTTTCTTCTTCTAAAGCGACTTCCCACCTCCCAGATTGGGTGCTaGCTCCTACCCGGACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLPGGLRPFLLLKRLPTSQIGC*LLPGLG Trigger: CCCGAGTCCGGGTAGGAGCCAGCACCCAATCTGGGA...GGTGGGAAGTCGCTTTAGAAGAAGAAAGGGCCGAAGGCCTCCAGGGAGCGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCAAAGCCATTCTTaGACAGCTCGGCCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRAQSHS*TARPAG Trigger: ACCAGCAGGCCGAGCTGTGCAAGAATGGCTTTGGGC...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCGGTCGACTGCATACTaGCAAGCACTCAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSFWGRVAHSDSPRIPARSTAY*QALRLE Trigger: CTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCG...CGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| 3UTR CAA 72 bp | CCTTCTAGCACAATTCTCAGTCTTTCTGGGGCAGAGTaGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSTILSLSGAE*PTPTVLGSPRP Trigger: AGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCTAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR TCA 90 bp | GGTAAAGACCAGCGAGCAACTCTTGCTAGTCAAGGGAGAAAAGGCTGGGCCGGGATGGTGACAGAAGGGTaGGGAGGCGGCCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKDQRATLASQGRKGWAGMVTEG*GGGRQL Trigger: AAGCTGTCGGCCGCCTCCTCACCCTTCTGTCACCAT...CCCGGCCCAGCCTTTTCTCCCTTGACTAGCAAGAGTTGCTCGCTGGTCTTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCGTTGCCGCTTCTTCTTaGACGGGTCCTCGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TILSLSGAELPTPTVLGSVAASS*TGPRRP Trigger: TGGGCGCCGAGGACCCGTCCAAGAAGAAGCGGCAAC...GGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGGGTTCTGCACGCTaGCGTAGCCGAAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TILSLSGAELPTPTVLGSPGSAR*RSRSWS Trigger: ACTCCAGCTTCGGCTACGCCAGCGTGCAGAACCCGG...GGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGTCATTCTTTCCTTGCTaGCCCTTATCTTTCTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGRVAHSDSPRIPAPWARSFFPC*PLSFSN Trigger: ATTAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGA...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106382.11 |
||
| CDS-3UTR TCA 90 bp | AGCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGAATGGTGACAGAAGGGTaGGGAGGCGGCCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STILSLSGAELPTPTVLGMVTEG*GGGRQL Trigger: AAGCTGTCGGCCGCCTCCTCACCCTTCTGTCACCAT...TCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042587.12 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGGCGACGGTAAGCCGGGAACACAATGCCCTTTGCTGAGGAATGCCCGCATGATCTGCAGGCTCTaGTTCTTGGCAAGGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGDGKPGTQCPLLRNARMICRL*FLARPR Trigger: CCGAGGCCTTGCCAAGAATCAGAGCCTGCAGATCAT...GCGGGCATTCCTCAGCAAAGGGCATTGTGTTCCCGGCTTACCGTCGCCAGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCATGAGCCCGTTGAACTaGGGCCCAAAGCCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRMSPLN*GPKPFL Trigger: CAAGAATGGCTTTGGGCCGCAGTTCAACGGGCTCAT...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCCCGAAGCTGGAGTGCTaGTTTGCTTTCAGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRPKLEC*FAFSLR Trigger: CCTGAGACTGAAAGCAAAGCAGCACTCCAGCTTCGG...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | ACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCACCGGCCGGTCGACTaGATACTGGCAAGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TILSLSGAELPTPTVLGSHRPVD*ILASTQ Trigger: CTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTG...GGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TTGGAGCCTGTTCACAGCTCCTGGCGGGGAGGGATTTTATTGGCGCTTGTCTGGCTCGTTTTCCCAGATTaGGTGCTGGCTCCTACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEPVHSSWRGGILLALVWLVFPD*VLAPTR Trigger: CCGGGTAGGAGCCAGCACCCAATCTGGGAAAACGAG...CCAGACAAGCGCCAATAAAATCCCTCCCCGCCAGGAGCTGTGAACAGGCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| 3UTR CAA 72 bp | TTCACAGCTCCTGGCGGGGAGGGATTTTATTGGCGCTaGTCTGGCGACGGTAAGCCGGGAACACAATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTAPGGEGFYWR*SGDGKPGTQCP Trigger: AGGGCATTGTGTTCCCGGCTTACCGTCGCCAGACAAGCGCCAATAAAATCCCTCCCCGCCAGGAGCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR TCA 90 bp | GCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATAGTTATTCAGGCTATTaGGGCTGGAGCCCGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: AQFSVFLGQSCPLRQSSDSYSGY*GWSPGR Trigger: GCGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACT...ATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCCACCGGCCGGTCGACTaGATACTGGCAAGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLAQFSVFLGQSCPLRQSHRPVD*ILASTQ Trigger: CTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTG...GGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCTAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | GCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCTAGGACCGAAGCCATaGCTAACGCCTGGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQFSVFLGQSCPLRQSSDLGPKP*LTPGDG Trigger: ACCATCCCCAGGCGTTAGCCATGGCTTCGGTCCTAG...ATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042587.12 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCTAGGAGCACAGGTTGGAGCCTGTTCACAGCTCCTGGCGGGGAGGGATGCGAGTGGACATGTCTaGGTAGCGGTTTCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVLGAQVGACSQLLAGRDASGHV*VAVSLE Trigger: TTCCAGAGAAACCGCTACCCAGACATGTCCACTCGC...ATCCCTCCCCGCCAGGAGCTGTGAACAGGCTCCAACCTGTGCTCCTAGAACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR GCA 90 bp | CAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGTCCTCTGCCGGCGTTaGCGCTTCTTCTTGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSNICGRTRPPTVGNTLSVLCRR*RFFLDG Trigger: CCCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGAC...GCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGACCAGCGAGCAACTCTTGCTAGTCAAGGGAGAAAAGGCTGGGCCGGGGGTTTCTCTGGAAAGTaGCTTCCAGCTCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKDQRATLASQGRKGWAGGFSGK*LPAPAA Trigger: AGCTGCAGGAGCTGGAAGCCACTTTCCAGAGAAACC...CCCGGCCCAGCCTTTTCTCCCTTGACTAGCAAGAGTTGCTCGCTGGTCTTTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CCA 90 bp | CGCCCCGGTAAAGACCAGCGAGCAACTCTTGCTAGTCAAGGGAGAAAAGGCTGGCGATTTCTTCGCGAGTaGACATGTCTGGGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGKDQRATLASQGRKGWRFLRE*TCLGSG Trigger: ACCGCTACCCAGACATGTCCACTCGCGAAGAAATCG...CCAGCCTTTTCTCCCTTGACTAGCAAGAGTTGCTCGCTGGTCTTTACCGGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CCA 90 bp | GCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATAGAAGGGGAAGCTCTTaGTGGACAGAGACGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: AQFSVFLGQSCPLRQSSDRRGSS*WTETLT Trigger: CGTCAGCGTCTCTGTCCACCAAGAGCTTCCCCTTCT...ATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTATGGCCCGGCGATTCTTaGACCAAACCCGGACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQTFVGVRVLQLLGILLWPGDS*TKPGLG Trigger: CCCGAGTCCGGGTTTGGTTCAAGAATCGCCGGGCCA...TAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | AGCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGAATGAGCCCGTTGAACTaGGGCCCAAAGCCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STILSLSGAELPTPTVLGMSPLN*GPKPFL Trigger: CAAGAATGGCTTTGGGCCGCAGTTCAACGGGCTCAT...TCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | GCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATGGTTTCTCTGGAAAGTaGCTTCCAGCTCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQFSVFLGQSCPLRQSSDGFSGK*LPAPAA Trigger: AGCTGCAGGAGCTGGAAGCCACTTTCCAGAGAAACC...ATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCGATTTCTTCGCGAGTaGACATGTCTGGGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TILSLSGAELPTPTVLGSRFLRE*TCLGSG Trigger: ACCGCTACCCAGACATGTCCACTCGCGAAGAAATCG...GGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | CGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCCATTGGCGCCGGGGTaGTGCCGCGGGAACAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTKCYTQDGSYIAVSETRPLAPG*CRGNSL Trigger: CAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGG...CCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGGTGTGAGCACAGCCTTCACTGAGCTGAACTTTCTTGAGAAGATAAATTCCAAGGAGCGGGGCTaGCCAGGAGCTAGGACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARGVSTAFTELNFLEKINSKERG*PGARTE Trigger: TTCGGTCCTAGCTCCTGGCCAGCCCCGCTCCTTGGA...ATTTATCTTCTCAAGAAAGTTCAGCTCAGTGAAGGCTGTGCTCACACCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCGCGAGTGGACATGTCTaGGTAGCGGTTTCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQFSVFLGQSCPLRQSASGHV*VAVSLE Trigger: TTCCAGAGAAACCGCTACCCAGACATGTCCACTCGC...GGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCTAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR TCA 90 bp | CATATCCAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTAGTTATTCAGGCTATTaGGGCTGGAGCCCGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: HIQSNICGRTRPPTVGNTSYSGY*GWSPGR Trigger: GCGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACT...AGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTGGATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | ATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACGTCCCGGCTGCTCGGTaGTCCAAGGGCAGCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISYEMLYTGWVVHSSFRNVPAAR*SKGSGP Trigger: AGGCCCGCTGCCCTTGGAGCACCGAGCAGCCGGGAC...GTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042587.12 |
||
| CDS-3UTR GCA 90 bp | GTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGAATTCAGTCCTCTGCCGGCGTTaGCGCTTCTTCTTGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VDTWGHSFEIKGALSLNSVLCRR*RFFLDG Trigger: CCCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGAC...TGAATTCAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGGGTTTCTCTGGAAAGTaGCTTCCAGCTCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQTFVGVRVLQLLGILLAGFSGK*LPAPAA Trigger: AGCTGCAGGAGCTGGAAGCCACTTTCCAGAGAAACC...CGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CCA 90 bp | CAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGCGAGTGGACATGTCTaGGTAGCGGTTTCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSNICGRTRPPTVGNTLSASGHV*VAVSLE Trigger: TTCCAGAGAAACCGCTACCCAGACATGTCCACTCGC...GCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CCA 90 bp | CAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCTGGCGTAGCCGAAGCTaGAGTGCTGCTTTGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSNICGRTRPPTVGNTLSWRSRS*SAALLS Trigger: TGAAAGCAAAGCAGCACTCCAGCTTCGGCTACGCCA...GCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | CGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCCGGGTTCTGCACGCTaGCGTAGCCGAAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTKCYTQDGSYIAVSETRPGSAR*RSRSWS Trigger: ACTCCAGCTTCGGCTACGCCAGCGTGCAGAACCCGG...CCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR TCA 90 bp | AAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGAGTTATTCAGGCTATTaGGGCTGGAGCCCGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: KDVDTWGHSFEIKGALSLSYSGY*GWSPGR Trigger: GCGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACT...CAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR GCA 90 bp | AGCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: STILSLSGAELPTPTVLGSSFFP*WPLSFS Trigger: AGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGA...TCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 |
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| CDS-3UTR GCA 90 bp | CTTCTAGCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCAATTCAGCGACGGGCTaGTCAGGTTGTTCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLAQFSVFLGQSCPLRQSNSATG*SGCSSY Trigger: ATAACTTGAACAACCTGAGCAGCCCGTCGCTGAATT...GGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR GCA 90 bp | ATACTCTTAGCGAAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCCACCGGCCGGTCGACTaGATACTGGCAAGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLAKDVDTWGHSFEIKGHRPVD*ILASTQ Trigger: CTGAGTGCTTGCCAGTATGCAGTCGACCGGCCGGTG...GCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAGAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR GCA 90 bp | GCAAGGGGTGTGAGCACAGCCTTCACTGAGCTGAACTTTCTTGAGAAGATAAATTTTTCCCAGATTGGGTaGTGGCTCCTACCCGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ARGVSTAFTELNFLEKINFSQIG*WLLPGL Trigger: GAGTCCGGGTAGGAGCCAGCACCCAATCTGGGAAAA...ATTTATCTTCTCAAGAAAGTTCAGCTCAGTGAAGGCTGTGCTCACACCCCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| CDS-3UTR CCA 90 bp | CATATCCAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCGATTTCTTCGCGAGTaGACATGTCTGGGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIQSNICGRTRPPTVGNTRFLRE*TCLGSG Trigger: ACCGCTACCCAGACATGTCCACTCGCGAAGAAATCG...AGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTGGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAAACGGTCGACTGCATACTaGCAAGCACTCAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQDGSYIAVSETRHPPEKRSTAY*QALRLE Trigger: CTCCAACCTGAGTGCTTGCCAGTATGCAGTCGACCG...TTTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR GCA 90 bp | ATACTCTTAGCGAAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCGGCCTGCTGGTTaGGTTCCCGCTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILLAKDVDTWGHSFEIKGARPAG*VPAFSI Trigger: AATGGAGAAAGCGGGAACGCAACCAGCAGGCCGAGC...GCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAGAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR GCA 90 bp | ATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACCAGCTTAGTCCCGGCTaGTCGGTGCTCCAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISYEMLYTGWVVHSSFRNQLSPG*SVLQGQ Trigger: CTGCCCTTGGAGCACCGAGCAGCCGGGACTAAGCTG...GTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042587.12 |
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| CDS-3UTR GCA 90 bp | ATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACGTCCTCTGCCGGCGTTaGCGCTTCTTCTTGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISYEMLYTGWVVHSSFRNVLCRR*RFFLDG Trigger: CCCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGAC...GTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAAGGACAGGCGGGCGTaGGCACCGCGGAATTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IISYEMLYTGWVVHSSFRKDRRA*APRNSA Trigger: CGCTGAATTCCGCGGTGCCCACGCCCGCCTGTCCTT...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| 3UTR CAA 72 bp | AGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTaGGGAATACTCTTAGCGAAAGACGTAGACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTFVGVRVLQL*GILLAKDVDTW Trigger: CCAAGTGTCTACGTCTTTCGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGATCCAAGGAGCGGGGCTaGCCAGGAGCTAGGACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IISYEMLYTGWVVHSSFRSKERG*PGARTE Trigger: TTCGGTCCTAGCTCCTGGCCAGCCCCGCTCCTTGGA...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042587.12 |
||
| CDS-3UTR CCA 90 bp | GTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGAATTCAAGAAGGGGAAGCTCTTaGTGGACAGAGACGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VDTWGHSFEIKGALSLNSRRGSS*WTETLT Trigger: CGTCAGCGTCTCTGTCCACCAAGAGCTTCCCCTTCT...TGAATTCAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | AAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGTGGCGTAGCCGAAGCTaGAGTGCTGCTTTGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDVDTWGHSFEIKGALSLWRSRS*SAALLS Trigger: TGAAAGCAAAGCAGCACTCCAGCTTCGGCTACGCCA...CAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGACCGGGTTCTGCACGCTaGCGTAGCCGAAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IISYEMLYTGWVVHSSFRPGSAR*RSRSWS Trigger: ACTCCAGCTTCGGCTACGCCAGCGTGCAGAACCCGG...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR TCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAACAGAGACGCTGACGTaGGGCCCTTGGCAGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IISYEMLYTGWVVHSSFRTETLT*GPWQPN Trigger: ATTGGGCTGCCAAGGGCCTCACGTCAGCGTCTCTGT...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | ATACTCTTAGCGAAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCATGAGCCCGTTGAACTaGGGCCCAAAGCCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLAKDVDTWGHSFEIKGMSPLN*GPKPFL Trigger: CAAGAATGGCTTTGGGCCGCAGTTCAACGGGCTCAT...GCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAGAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAGCTCGGCCTGCTGGTTaGGTTCCCGCTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IISYEMLYTGWVVHSSFRARPAG*VPAFSI Trigger: AATGGAGAAAGCGGGAACGCAACCAGCAGGCCGAGC...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CCA 90 bp | TACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCACGATTTCTTCGCGAGTaGACATGTCTGGGTAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YEMLYTGWVVHSSFRNKARFLRE*TCLGSG Trigger: ACCGCTACCCAGACATGTCCACTCGCGAAGAAATCG...TGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGGGGTGTGAGCACAGCCTTCACTGAGCTGAACTTTCTTGAGAAGATAAATTCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARGVSTAFTELNFLEKINSSFFP*WPLSFS Trigger: AGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGA...ATTTATCTTCTCAAGAAAGTTCAGCTCAGTGAAGGCTGTGCTCACACCCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR GCA 90 bp | AAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGAATTCAGCGACGGGCTaGTCAGGTTGTTCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KDVDTWGHSFEIKGALSLNSATG*SGCSSY Trigger: ATAACTTGAACAACCTGAGCAGCCCGTCGCTGAATT...CAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | ATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACCCGAAGCTGGAGTGCTaGTTTGCTTTCAGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISYEMLYTGWVVHSSFRNPKLEC*FAFSLR Trigger: CCTGAGACTGAAAGCAAAGCAGCACTCCAGCTTCGG...GTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAGGTTTCTCTGGAAAGTaGCTTCCAGCTCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IISYEMLYTGWVVHSSFRGFSGK*LPAPAA Trigger: AGCTGCAGGAGCTGGAAGCCACTTTCCAGAGAAACC...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR GCA 90 bp | CGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGTCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTKCYTQDGSYIAVSETRSSFFP*WPLSFS Trigger: AGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGA...CCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 |
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| CDS-3UTR GCA 90 bp | GTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGAATTCATTATCTTTCTCTAATTaGACGCAGGCCGACACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VDTWGHSFEIKGALSLNSLSFSN*TQADTS Trigger: ACTAGTGTCGGCCTGCGTGCAATTAGAGAAAGATAA...TGAATTCAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106382.11 |
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| CDS-3UTR GCA 90 bp | TACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YEMLYTGWVVHSSFRNKASSFFP*WPLSFS Trigger: TGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGA...TGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174661.9 |
||
| CDS-3UTR GCA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAATTCAGCGACGGGCTaGTCAGGTTGTTCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IISYEMLYTGWVVHSSFRNSATG*SGCSSY Trigger: ATAACTTGAACAACCTGAGCAGCCCGTCGCTGAATT...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGGGCCCAAAGCCATTCTaGCACAGCTCGGCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGRVAHSDSPRIPAPWARGPKPF*HSSACW Trigger: CCAGCAGGCCGAGCTGTGCAAGAATGGCTTTGGGCC...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGCGCGGGGCTGCATGAGCCCGTaGAACTGCGGCCCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGRVAHSDSPRIPAPWARGCMSP*NCGPKP Trigger: TGGCTTTGGGCCGCAGTTCAACGGGCTCATGCAGCC...CCGCGCCCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGCGGCAGCTCTGCCTGGGAACCGGGAGCAGTAACCTCGGGCACACTCGCCGTTGCCGCTTCTTCTaGGACGGGTCCTCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARRQLCLGTGSSNLGHTRRCRFF*DGSSAP Trigger: GGGCGCCGAGGACCCGTCCAAGAAGAAGCGGCAACG...GCGAGTGTGCCCGAGGTTACTGCTCCCGGTTCCCAGGCAGAGCTGCCGCCTGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGTGGCAAGCACTCAGGTaGGAGGCCGGGTTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SFWGRVAHSDSPRIPAPWWQALR*EAGFCT Trigger: CGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCA...CCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGAGTCCTCTGCCGGCGTaGCCGCTTCTTCTTGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSFWGRVAHSDSPRIPASPLPA*PLLLGR Trigger: CCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGACT...CGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS CCA 90 bp | GGCTCTGATTCTTGGCAAGGCCTCGGCCCCCTCGTTTTCCCAGATTaGGTGCTGGCTCCTACCCGGACTCGGGCTTCCGTAAGGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSDSWQGLGPLVFPD*VLAPTRTRASVRLV Trigger: GACCAACCTTACGGAAGCCCGAGTCCGGGTAGGAGCCAGCACCCAATCTGGGAAAACGAGGGGGCCGAGGCCTTGCCAAGAATCAGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGGCCCAAAGCCATTCTaGCACAGCTCGGCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRGPKPF*HSSACW Trigger: CCAGCAGGCCGAGCTGTGCAAGAATGGCTTTGGGCC...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGGCTGCATGAGCCCGTaGAACTGCGGCCCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRGCMSP*NCGPKP Trigger: TGGCTTTGGGCCGCAGTTCAACGGGCTCATGCAGCC...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCAGTCCTCTGCCGGCGTaGCCGCTTCTTCTTGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRSPLPA*PLLLGR Trigger: CCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGACT...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS GCA 90 bp | TTCTTCTTGGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCATTGGCGCCGGGGTGCTGCCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FFLDGSSAPTSSFFP*WPLSFSLAPGCCRG Trigger: CCCGCGGCAGCACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCCAAGAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | TCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCAAGAAGGGGAAGCTCTaGGTGGACAGAGACGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVFLGQSCPLRQSSDPRAKKGKL*VDRDAD Trigger: GTCAGCGTCTCTGTCCACCAAGAGCTTCCCCTTCTT...GGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | TCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCAAGTTATTCAGGCTATaGAGGCTGGAGCCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SVFLGQSCPLRQSSDPRAKLFRL*RLEPGT Trigger: CGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACTT...GGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS GCA 90 bp | TTCTTTCCTTGCTGGCCCTTATCTTTCTCATTGGCGCCGGGGTGCTaGCGCGGGAACAGCTTGCTGCTGGCCGACTCTTTCCGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFPCWPLSFSLAPGC*RGNSLLLADSFRLL Trigger: CAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCAAGGAAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | GTTGGAGCCTGTTCACAGCTCCTGGCGGGGAGGGATTTTATTGGCGCTTGTCTGAGTCCTCTGCCGGCGTaGCCGCTTCTTCTTGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: VGACSQLLAGRDFIGACLSPLPA*PLLLGR Trigger: CCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGACT...CAGACAAGCGCCAATAAAATCCCTCCCCGCCAGGAGCTGTGAACAGGCTCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| CDS-3UTR CAA 90 bp | TCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGCCCTGGGACGGGCTGCTCAGGTaGTTCAAGTTATTCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SFWGRVAHSDSPRIPAPWDGLLR*FKLFRL Trigger: TAGCCTGAATAACTTGAACAACCTGAGCAGCCCGTC...CCAGGGCGCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | ACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCTGGCAAGCACTCAGGTaGGAGGCCGGGTTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TILSLSGAELPTPTVLGSWQALR*EAGFCT Trigger: CGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCA...GGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS CCA 90 bp | CAGGGCTGGAAGTATCGGAGATTGTATGCACCTCCAGTCTATGTTTaGAGGAGTCCAAGGAGCGGGGCTGGCCAGGAGCTAGGACCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QGWKYRRLYAPPVYV*RSPRSGAGQELGPK Trigger: CTTCGGTCCTAGCTCCTGGCCAGCCCCGCTCCTTGGACTCCTCCAAACATAGACTGGAGGTGCATACAATCTCCGATACTTCCAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS-3UTR CAA 90 bp | GTTCTGCACGCTGGCGTAGCCGAAGCTGGAGTGCTGCTTTGCTTTCAGTCTCAGGACTCTTTCCGGCTCTaGGGAGAGTCCGTGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: VLHAGVAEAGVLLCFQSQDSFRL*GESVNS Trigger: CGAGTTCACGGACTCTCCCAAGAGCCGGAAAGAGTC...CTGAGACTGAAAGCAAAGCAGCACTCCAGCTTCGGCTACGCCAGCGTGCAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
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| CDS-3UTR CAA 90 bp | CAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCCGTTGCCGCTTCTTCTaGGACGGGTCCTCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSNICGRTRPPTVGNTLSRCRFF*DGSSAP Trigger: GGGCGCCGAGGACCCGTCCAAGAAGAAGCGGCAACG...GCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | TTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCCCGCGACGGGCTGCTCAGGTaGTTCAAGTTATTCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: FSVFLGQSCPLRQSSDPRDGLLR*FKLFRL Trigger: TAGCCTGAATAACTTGAACAACCTGAGCAGCCCGTC...GCGGGGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS CCA 90 bp | TTCTTGGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTTGCTaGCCCTTATCTTTCTCTGCGACTTCAGGGCTGGAAGTATCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLDGSSAPTSSFFPC*PLSFSATSGLEVSE Trigger: CTCCGATACTTCCAGCCCTGAAGTCGCAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS-3UTR CAA 90 bp | CAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGGCCCAAAGCCATTCTaGCACAGCTCGGCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSNICGRTRPPTVGNTLSGPKPF*HSSACW Trigger: CCAGCAGGCCGAGCTGTGCAAGAATGGCTTTGGGCC...GCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | CAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGGCTGCATGAGCCCGTaGAACTGCGGCCCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSNICGRTRPPTVGNTLSGCMSP*NCGPKP Trigger: TGGCTTTGGGCCGCAGTTCAACGGGCTCATGCAGCC...GCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | AGCACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGAAAGAAGGGGAAGCTCTaGGTGGACAGAGACGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: STILSLSGAELPTPTVLGKKGKL*VDRDAD Trigger: GTCAGCGTCTCTGTCCACCAAGAGCTTCCCCTTCTT...TCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | ACAATTCTCAGTCTTTCTGGGGCAGAGTTGCCCACTCCGACAGTCCTCGGATCCAGCTGGAGTGCTGCTTaGCTTTCAGTCTCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TILSLSGAELPTPTVLGSSWSAA*LSVSGW Trigger: CCAGCCTGAGACTGAAAGCAAAGCAGCACTCCAGCT...GGATCCGAGGACTGTCGGAGTGGGCAACTCTGCCCCAGAAAGACTGAGAATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | AGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGCCCTTATCTTTCTCATaGGCGCCGGGGTGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SQTFVGVRVLQLLGILLAPLSFS*APGCCR Trigger: GCGGCAGCACCCCGGCGCCAATGAGAAAGATAAGGG...CGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174661.9 |
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| CDS GCA 90 bp | TTCTTCTTGGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCTGCGACTTCAGGGCTGGAAGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: FFLDGSSAPTSSFFP*WPLSFSATSGLEVS Trigger: CGATACTTCCAGCCCTGAAGTCGCAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCCAAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS-3UTR CAA 90 bp | TCCAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGGCTGCATGAGCCCGTaGAACTGCGGCCCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSQTFVGVRVLQLLGILLGCMSP*NCGPKP Trigger: TGGCTTTGGGCCGCAGTTCAACGGGCTCATGCAGCC...TAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS-3UTR CAA 90 bp | AAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGCGTTGCCGCTTCTTCTaGGACGGGTCCTCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KDVDTWGHSFEIKGALSLRCRFF*DGSSAP Trigger: GGGCGCCGAGGACCCGTCCAAGAAGAAGCGGCAACG...CAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
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| CDS GCA 90 bp | TTCTTCTTGGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCTAATTGCACGCAGGCCGACACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLDGSSAPTSSFFP*WPLSFSNCTQADTS Trigger: ACTAGTGTCGGCCTGCGTGCAATTAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCCAAGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106382.11 |
||
| CDS-3UTR CAA 90 bp | ACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAAATGCCGCGGGAACAGCTaGCTGCTGGCCGACTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQDGSYIAVSETRHPPEKCRGNS*LLADSF Trigger: GAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCA...TTTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029657.16 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAAAGGCCCAAAGCCATTCTaGCACAGCTCGGCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQDGSYIAVSETRHPPEKGPKPF*HSSACW Trigger: CCAGCAGGCCGAGCTGTGCAAGAATGGCTTTGGGCC...TTTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAAAAGTCCTCTGCCGGCGTaGCCGCTTCTTCTTGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: TQDGSYIAVSETRHPPEKSPLPA*PLLLGR Trigger: CCGTCCAAGAAGAAGCGGCAACGCCGGCAGAGGACT...TTTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS GCA 90 bp | TTATCTTTCTCTGCGACTTCAGGGCTGGAAGTATCGGAGATTGTATaGACCTCCAGTCTATGTTTGGAGGAGTCCAAGGAGCGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFSATSGLEVSEIV*TSSLCLEESKERGW Trigger: CCAGCCCCGCTCCTTGGACTCCTCCAAACATAGACTGGAGGTGCATACAATCTCCGATACTTCCAGCCCTGAAGTCGCAGAGAAAGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
||
| CDS-3UTR CAA 90 bp | CAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCAAGAAGGGGAAGCTCTaGGTGGACAGAGACGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QSNICGRTRPPTVGNTLSKKGKL*VDRDAD Trigger: GTCAGCGTCTCTGTCCACCAAGAGCTTCCCCTTCTT...GCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGAAGTTATTCAGGCTATaGAGGCTGGAGCCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SQTFVGVRVLQLLGILLAKLFRL*RLEPGT Trigger: CGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACTT...CGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAAAGACTCTTTCCGGCTCTaGGGAGAGTCCGTGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: TQDGSYIAVSETRHPPEKDSFRL*GESVNS Trigger: CGAGTTCACGGACTCTCCCAAGAGCCGGAAAGAGTC...TTTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029657.16 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | TATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACACGTTGCCGCTTCTTCTaGGACGGGTCCTCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRTKCYTQDGSYIAVSETRCRFF*DGSSAP Trigger: GGGCGCCGAGGACCCGTCCAAGAAGAAGCGGCAACG...TGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | CGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGTGGCAAGCACTCAGGTaGGAGGCCGGGTTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RTKCYTQDGSYIAVSETRWQALR*EAGFCT Trigger: CGTGCAGAACCCGGCCTCCAACCTGAGTGCTTGCCA...CCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGACGGGCTGCTCAGGTaGTTCAAGTTATTCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSQTFVGVRVLQLLGILLDGLLR*FKLFRL Trigger: TAGCCTGAATAACTTGAACAACCTGAGCAGCCCGTC...TAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTCTTAGCGTGGAAGTATCGGAGATaGTATGCACCTCCAGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SQTFVGVRVLQLLGILLAWKYRR*YAPPVY Trigger: ATAGACTGGAGGTGCATACAATCTCCGATACTTCCA...CGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042587.12 |
||
| CDS-3UTR CAA 90 bp | CATATCCAGTCAAACATTTGTGGGCGTACGCGTCCTCCAACTGTTGGGAATACTTTGACGTTCATGGAGTaGAAGAAGGGGAAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HIQSNICGRTRPPTVGNTLTFME*KKGKLL Trigger: CAAGAGCTTCCCCTTCTTCAACTCCATGAACGTCAA...AGTATTCCCAACAGTTGGAGGACGCGTACGCCCACAAATGTTTGACTGGATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | ATACTCTTAGCGAAAGACGTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCAGCTGGAGTGCTGCTTaGCTTTCAGTCTCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLAKDVDTWGHSFEIKGSWSAA*LSVSGW Trigger: CCAGCCTGAGACTGAAAGCAAAGCAGCACTCCAGCT...GCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTACGTCTTTCGCTAAGAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | TACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCAAAGTTATTCAGGCTATaGAGGCTGGAGCCCGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: YEMLYTGWVVHSSFRNKAKLFRL*RLEPGT Trigger: CGTCCCGGGCTCCAGCCTCAATAGCCTGAATAACTT...TGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGGCATCCACCAGAGAAAGTGAACTCGACCTTTTaGATTTCGGAGTCTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQDGSYIAVSETRHPPEKVNSTF*ISESLE Trigger: CTCCAAAGACTCCGAAATCAAAAAGGTCGAGTTCAC...TTTCTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029657.16 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGGTGTGAGCACAGCCTTCACTGAGCTGAACTTTCTTGAGAAGATAAATTGGAAGTATCGGAGATaGTATGCACCTCCAGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ARGVSTAFTELNFLEKINWKYRR*YAPPVY Trigger: ATAGACTGGAGGTGCATACAATCTCCGATACTTCCA...ATTTATCTTCTCAAGAAAGTTCAGCTCAGTGAAGGCTGTGCTCACACCCCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS-3UTR CAA 90 bp | TATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACAAGCTGGAGTGCTGCTTaGCTTTCAGTCTCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YRTKCYTQDGSYIAVSETSWSAA*LSVSGW Trigger: CCAGCCTGAGACTGAAAGCAAAGCAGCACTCCAGCT...TGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | GTAGACACTTGGGGACATTCCTTTGAAATCAAAGGCGCTCTCTCTTTGAATTCATTGACGTTCATGGAGTaGAAGAAGGGGAAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VDTWGHSFEIKGALSLNSLTFME*KKGKLL Trigger: CAAGAGCTTCCCCTTCTTCAACTCCATGAACGTCAA...TGAATTCAAAGAGAGAGCGCCTTTGATTTCAAAGGAATGTCCCCAAGTGTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | TATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAAACATTGACGTTCATGGAGTaGAAGAAGGGGAAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRTKCYTQDGSYIAVSETLTFME*KKGKLL Trigger: CAAGAGCTTCCCCTTCTTCAACTCCATGAACGTCAA...TGTTTCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000174661.9 |
||
| CDS-3UTR CAA 90 bp | ATAATATCGTACGAAATGTTATACACAGGATGGGTCGTACATAGCAGTTTCAGAGTGAACTCGACCTTTTaGATTTCGGAGTCTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IISYEMLYTGWVVHSSFRVNSTF*ISESLE Trigger: CTCCAAAGACTCCGAAATCAAAAAGGTCGAGTTCAC...TCTGAAACTGCTATGTACGACCCATCCTGTGTATAACATTTCGTACGATATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029657.16 ENSMUST00000174661.9 |
||
| CDS GCA 72 bp | CATTGGCGCCGGGGTGCTGCCGCGGGAACAGCTTGCTaGTGGCCGACTCTTTCCGGCTCTTGGGAGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HWRRGAAAGTAC*WPTLSGSWESP Trigger: CGGACTCTCCCAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000172645.8 ENSMUST00000173645.4 ENSMUST00000174661.9 |
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| CDS CCA 72 bp | AGGAGCGGGGCTGGCCAGGAGCTAGGACCGAAGCCATaGCTAACGCCTGGGGATGGTGACAGAAGGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSGAGQELGPKP*LTPGDGDRRVR Trigger: CCTCACCCTTCTGTCACCATCCCCAGGCGTTAGCCATGGCTTCGGTCCTAGCTCCTGGCCAGCCCCGCTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS CAA 72 bp | AAACCATTGGCGCCGGGGTGCTGCCGCGGGAACAGCTaGCTGCTGGCCGACTCTTTCCGGCTCTTGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KPLAPGCCRGNS*LLADSFRLLGE Trigger: CTCTCCCAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGGTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029657.16 |
||
| CDS CAA 72 bp | TTCTCATTGGCGCCGGGGTGCTGCCGCGGGAACAGCTaGCTGCTGGCCGACTCTTTCCGGCTCTTGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSLAPGCCRGNS*LLADSFRLLGE Trigger: CTCTCCCAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
||
| CDS GCA 72 bp | CCTTGCTGGCCCTTATCTTTCTCATTGGCGCCGGGGTaGTGCCGCGGGAACAGCTTGCTGCTGGCCGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PCWPLSFSLAPG*CRGNSLLLADS Trigger: AGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS CCA 72 bp | TCTTGGCAAGGCCTCGGCCCCCTCGTTTTCCCAGATTaGGTGCTGGCTCCTACCCGGACTCGGGCTTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: SWQGLGPLVFPD*VLAPTRTRASV Trigger: TACGGAAGCCCGAGTCCGGGTAGGAGCCAGCACCCAATCTGGGAAAACGAGGGGGCCGAGGCCTTGCCAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
||
| CDS CAA 72 bp | TTCTTGGCAAGGCCTCGGCCCCCTCGTTTTCCCAGATaGGGTGCTGGCTCCTACCCGGACTCGGGCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: FLARPRPPRFPR*GAGSYPDSGFR Trigger: ACGGAAGCCCGAGTCCGGGTAGGAGCCAGCACCCAATCTGGGAAAACGAGGGGGCCGAGGCCTTGCCAAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174623.3 |
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| CDS CAA 90 bp | CCCTTATCTTTCTCATTGGCGCCGGGGTGCTGCCGCGGGAACAGCTaGCTGCTGGCCGACTCTTTCCGGCTCTTGGGAGAGTCCGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PLSFSLAPGCCRGNS*LLADSFRLLGESVN Trigger: GTTCACGGACTCTCCCAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGAGAAAGATAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS GCA 72 bp | TGCTGGCCCTTATCTTTCTCATTGGCGCCGGGGTGCTaGCGCGGGAACAGCTTGCTGCTGGCCGACTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CWPLSFSLAPGC*RGNSLLLADSF Trigger: GAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS CAA 90 bp | CTTCTTCTTGGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTaGCTGGCCCTTATCTTTCTCATTGGCGCCGGGGTGCTGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLGRVLGAHILILS*LALIFLIGAGVLPR Trigger: CCGCGGCAGCACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCCAAGAAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS GCA 72 bp | AACTGCGGCCCAAAGCCATTCTTGCACAGCTCGGCCTaGTGGTTGCGTTCCCGCTTTCTCCATTTGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NCGPKPFLHSSA*WLRSRFLHLAR Trigger: CCGGGCCAAATGGAGAAAGCGGGAACGCAACCAGCAGGCCGAGCTGTGCAAGAATGGCTTTGGGCCGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029657.16 ENSMUST00000042587.12 ENSMUST00000106382.11 ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS GCA 72 bp | GACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCATTGGCGCCGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DGSSAPTSSFFP*WPLSFSLAPGC Trigger: GCACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS CCA 72 bp | GGGTCCTCGGCGCCCACATCCTCATTCTTTCCTTGCTaGCCCTTATCTTTCTCATTGGCGCCGGGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSSAPTSSFFPC*PLSFSLAPGCC Trigger: GCAGCACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS CAA 72 bp | GGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTaGCTGGCCCTTATCTTTCTCATTGGCGCCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRVLGAHILILS*LALIFLIGAGV Trigger: CACCCCGGCGCCAATGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172645.8 ENSMUST00000174661.9 |
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| CDS CAA 72 bp | GGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTaGCTGGCCCTTATCTTTCTCTGCGACTTCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRVLGAHILILS*LALIFLCDFRA Trigger: AGCCCTGAAGTCGCAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS CAA 90 bp | TGCTGCCGCGGGAACAGCTTGCTGCTGGCCGACTCTTTCCGGCTCTaGGGAGAGTCCGTGAACTCGACCTTTTTGATTTCGGAGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CCRGNSLLLADSFRL*GESVNSTFLISESL Trigger: CAAAGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029657.16 ENSMUST00000173645.4 ENSMUST00000174661.9 |
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| CDS CAA 90 bp | TCAGGGCTGGAAGTATCGGAGATTGTATGCACCTCCAGTCTATGTTaGGAGGAGTCCAAGGAGCGGGGCTGGCCAGGAGCTAGGACCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SGLEVSEIVCTSSLC*EESKERGWPGARTE Trigger: TTCGGTCCTAGCTCCTGGCCAGCCCCGCTCCTTGGACTCCTCCAAACATAGACTGGAGGTGCATACAATCTCCGATACTTCCAGCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS GCA 72 bp | GACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTTaGTGGCCCTTATCTTTCTCTAATTGCACGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DGSSAPTSSFFP*WPLSFSNCTQA Trigger: GGCCTGCGTGCAATTAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106382.11 |
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| CDS CAA 90 bp | TGCTGCCGCGGGAACAGCTTGCTGCTGGCCGACTCTTTCCGGCTCTaGGGAGAGTCCGTGAACTCGACCTTTTTGATTTCGGAGTCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: CCRGNSLLLADSFRL*GESVNSTFLISESN Trigger: ATTAGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCCGCGGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172645.8 |
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| CDS GCA 72 bp | AAGAGACATTCAACGGCTGCCGGCTGCACGCCTAATTaGACGCAGGCCGACACTAGTTTGCGACAATTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KRHSTAAGCTPN*TQADTSLRQLV Trigger: GACCAATTGTCGCAAACTAGTGTCGGCCTGCGTGCAATTAGGCGTGCAGCCGGCAGCCGTTGAATGTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029657.16 ENSMUST00000173645.4 ENSMUST00000174661.9 |
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| CDS CAA 72 bp | GGGAACAGCTTGCTGCTGGCCGACTCTTTCCGGCTCTaGGGAGAGTCCGTGAACTCGACCTTTTTGATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: GNSLLLADSFRL*GESVNSTFLIS Trigger: CGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGAAAGAGTCGGCCAGCAGCAAGCTGTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029657.16 ENSMUST00000172645.8 ENSMUST00000173645.4 ENSMUST00000174661.9 |
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| CDS CAA 90 bp | GCCGACTCTTTCCGGCTCTTGGGAGAGTCCGTGAACTCGACCTTTTaGATTTCGGAGTCTTTGGAGAAGAGACATTCAACGGCTGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADSFRLLGESVNSTF*ISESLEKRHSTAAG Trigger: GCCGGCAGCCGTTGAATGTCTCTTCTCCAAAGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGAAAGAGTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029657.16 ENSMUST00000173645.4 ENSMUST00000174661.9 |
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| CDS CAA 90 bp | CTTCTTCTTGGACGGGTCCTCGGCGCCCACATCCTCATTCTTTCCTaGCTGGCCCTTATCTTTCTCTGCGACTTCAGGGCTGGAAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: LLLGRVLGAHILILS*LALIFLCDFRAGSI Trigger: GATACTTCCAGCCCTGAAGTCGCAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGAGGATGTGGGCGCCGAGGACCCGTCCAAGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS CAA 90 bp | GGCCCTTATCTTTCTCTGCGACTTCAGGGCTGGAAGTATCGGAGATaGTATGCACCTCCAGTCTATGTTTGGAGGAGTCCAAGGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPYLSLRLQGWKYRR*YAPPVYVWRSPRSG Trigger: CCCGCTCCTTGGACTCCTCCAAACATAGACTGGAGGTGCATACAATCTCCGATACTTCCAGCCCTGAAGTCGCAGAGAAAGATAAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
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| CDS CAA 90 bp | GCCGACTCTTTCCGGCTCTTGGGAGAGTCCGTGAACTCGACCTTTTaGATTTCGGAGTCTAATTGCACGCAGGCCGACACTAGTTTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ADSFRLLGESVNSTF*ISESNCTQADTSLR Trigger: TCGCAAACTAGTGTCGGCCTGCGTGCAATTAGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGAAAGAGTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172645.8 |
||
| CDS CAA 72 bp | TTCCGGCTCTTGGGAGAGTCCGTGAACTCGACCTTTTaGATTTCGGAGTCTAATTGCACGCAGGCCGACACT | + |
|
Preference number: 6 (lower is better) Translates to: FRLLGESVNSTF*ISESNCTQADT Trigger: AGTGTCGGCCTGCGTGCAATTAGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172645.8 |
||
| CDS CAA 90 bp | CTCTTGGGAGAGTCCGTGAACTCGACCTTTTTGATTTCGGAGTCTTaGGAGAAGAGACATTCAACGGCTGCCGGCTGCACGCCTAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGESVNSTFLISES*EKRHSTAAGCTPNC Trigger: GCAATTAGGCGTGCAGCCGGCAGCCGTTGAATGTCTCTTCTCCAAAGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029657.16 ENSMUST00000173645.4 ENSMUST00000174661.9 |
||
| CDS GCA 72 bp | TCTGCGACTTCAGGGCTGGAAGTATCGGAGATTGTATaGACCTCCAGTCTATGTTTGGAGGAGTCCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SATSGLEVSEIV*TSSLCLEESKE Trigger: CTCCTTGGACTCCTCCAAACATAGACTGGAGGTGCATACAATCTCCGATACTTCCAGCCCTGAAGTCGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
||
| CDS CCA 72 bp | CTTGCTGGCCCTTATCTTTCTCTGCGACTTCAGGGCTaGAAGTATCGGAGATTGTATGCACCTCCAGTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LAGPYLSLRLQG*KYRRLYAPPVY Trigger: ATAGACTGGAGGTGCATACAATCTCCGATACTTCCAGCCCTGAAGTCGCAGAGAAAGATAAGGGCCAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
||
| CDS CAA 72 bp | CTTTCTCTGCGACTTCAGGGCTGGAAGTATCGGAGATaGTATGCACCTCCAGTCTATGTTTGGAGGAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLRLQGWKYRR*YAPPVYVWRSP Trigger: TGGACTCCTCCAAACATAGACTGGAGGTGCATACAATCTCCGATACTTCCAGCCCTGAAGTCGCAGAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042587.12 ENSMUST00000174623.3 |
||
| CDS GCA 72 bp | TCCGTGAACTCGACCTTTTTGATTTCGGAGTCTAATTaGACGCAGGCCGACACTAGTTTGCGACAATTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVNSTFLISESN*TQADTSLRQLV Trigger: GACCAATTGTCGCAAACTAGTGTCGGCCTGCGTGCAATTAGACTCCGAAATCAAAAAGGTCGAGTTCACGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172645.8 |
||
| CDS CAA 72 bp | TTCCGGCTCTTGGGAGAGTCCGTGAACTCGACCTTTTaGATTTCGGAGTCTTTGGAGAAGAGACATTCAACG | + |
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Preference number: 6 (lower is better) Translates to: FRLLGESVNSTF*ISESLEKRHST Trigger: CGTTGAATGTCTCTTCTCCAAAGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029657.16 ENSMUST00000173645.4 ENSMUST00000174661.9 |
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| CDS GCA 72 bp | TCATTCTTTCCTTGCTGGCCCTTATCTTTCTCTAATTaGACGCAGGCCGACACTAGTTTGCGACAATTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SFFPCWPLSFSN*TQADTSLRQLV Trigger: GACCAATTGTCGCAAACTAGTGTCGGCCTGCGTGCAATTAGAGAAAGATAAGGGCCAGCAAGGAAAGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106382.11 |
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