RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PITPNM3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040543

Ensembl transcript IDs: ENSMUST00000075258.13, ENSMUST00000108508.3

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCAGCTTGCGGGCACAGGAGTGGGGAGGCGGCGGCGACTTCACTaGGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCTCCCC +
Preference number: 1 (lower is better)
Translates to: LQLAGTGVGRRRRLH*DNPGFTPSQPRELP
Trigger: GGGGAGCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCCGCCTCCCCACTCCTGTGCCCGCAAGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp GGCAGGCTGGAGAAGACATTTGAGTGGAAAGGGCAGAGTGGGTACTaGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGG +
Preference number: 1 (lower is better)
Translates to: GRLEKTFEWKGQSGY*EPAPHPSSLREAPG
Trigger: CCCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTCTGCCCTTTCCACTCAAATGTCTTCTCCAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 90 bp GGCCCTGGCCTCAGTGGCAGCCCAGAGGGCCCCAAGACACCCAGGTaGCCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: GPGLSGSPEGPKTPR*PCNRYQPGPESKRR
Trigger: CCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTGGGTGTCTTGGGGCCCTCTGGGCTGCCACTGAGGCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp CAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTaGCAGTCACCCCCATCGGCAGCCACCACTGGCTGCATGGGAGCT +
Preference number: 1 (lower is better)
Translates to: QPQGGTRVAGQLTTW*QSPPSAATTGCMGA
Trigger: AGCTCCCATGCAGCCAGTGGTGGCTGCCGATGGGGGTGACTGGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp CCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCAAGGCCAAGGGCTTaGCAGCAAGGAGACATGCCCGCCCTTGCCACCACCCTAAGGGGT +
Preference number: 1 (lower is better)
Translates to: PGPESKRRPVPRPRA*QQGDMPALATTLRG
Trigger: ACCCCTTAGGGTGGTGGCAAGGGCGGGCATGTCTCCTTGCTGCCAAGCCCTTGGCCTTGGCACAGGCCTCCTCTTGCTCTCTGGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp CTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATaGTGCCAGTCACCCCCATCGGCAGCCACCACTGGCTGCATGGGA +
Preference number: 1 (lower is better)
Translates to: LQPQGGTRVAGQLTT*CQSPPSAATTGCMG
Trigger: TCCCATGCAGCCAGTGGTGGCTGCCGATGGGGGTGACTGGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp ACACTGGGCTGGCATGTGCCTGCAGTGTACACAGGTACTTGGCCCTaGCCTCAGTGGCAGCCCAGAGGGCCCCAAGACACCCAGGTGACC +
Preference number: 1 (lower is better)
Translates to: TLGWHVPAVYTGTWP*PQWQPRGPQDTQVT
Trigger: GGTCACCTGGGTGTCTTGGGGCCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCACATGCCAGCCCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp CATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTaGCAAGGCCAAGGGCTTGGCAGCAAGGAGACATGCCCGCCCTTG +
Preference number: 1 (lower is better)
Translates to: HATGISLGQRARGGL*QGQGLGSKETCPPL
Trigger: CAAGGGCGGGCATGTCTCCTTGCTGCCAAGCCCTTGGCCTTGGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp AGAGGGCCCCAAGACACCCAGGTGACCATGCAACAGGTATCAGCCTaGGCCAGAGAGCAAGAGGAGGCCTGTGCCAAGGCCAAGGGCTTG +
Preference number: 1 (lower is better)
Translates to: RGPQDTQVTMQQVSA*AREQEEACAKAKGL
Trigger: CAAGCCCTTGGCCTTGGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTGGGTGTCTTGGGGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp TGGCATGTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTaGCAGCCCAGAGGGCCCCAAGACACCCAGGTGACCATGCAACAG +
Preference number: 1 (lower is better)
Translates to: WHVPAVYTGTWPWPQ*QPRGPQDTQVTMQQ
Trigger: CTGTTGCATGGTCACCTGGGTGTCTTGGGGCCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCACATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp AGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCTCTaGTCGGACACTGCTGGACAGACACGGGAGGGAAAAAGCAGGAAA +
Preference number: 1 (lower is better)
Translates to: SPESSPMSGQGPSLL*SDTAGQTREGKSRK
Trigger: TTTCCTGCTTTTTCCCTCCCGTGTCTGTCCAGCAGTGTCCGACCAGAGCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp CAACATGGTGCCAGTCACCCCCATCGGCAGCCACCACTGGCTGCATaGGAGCTGCAAGAGGTAGACATTGAGCAGAAGCGACACTGGGCT +
Preference number: 1 (lower is better)
Translates to: QHGASHPHRQPPLAA*ELQEVDIEQKRHWA
Trigger: AGCCCAGTGTCGCTTCTGCTCAATGTCTACCTCTTGCAGCTCCCATGCAGCCAGTGGTGGCTGCCGATGGGGGTGACTGGCACCATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp ACAAGGAGGGCAGACACAAATGCCACTCTCTCCTCTACAGACAGTTaGTGTACCTGCAATCGGCCACCTACCTGGCCGCGTGCCCAGCCA +
Preference number: 1 (lower is better)
Translates to: TRRADTNATLSSTDS*CTCNRPPTWPRAQP
Trigger: TGGCTGGGCACGCGGCCAGGTAGGTGGCCGATTGCAGGTACAGCAACTGTCTGTAGAGGAGAGAGTGGCATTTGTGTCTGCCCTCCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp GCCTGCTCTGCAGCCCCCTGGCAGTGCTGGGTTTCGTTTGCTGAATaGAGTGCTGATGGTGCAGTGGAGAGCTGGCAGATGGAACAGGAT +
Preference number: 1 (lower is better)
Translates to: ACSAAPWQCWVSFAE*SADGAVESWQMEQD
Trigger: ATCCTGTTCCATCTGCCAGCTCTCCACTGCACCATCAGCACTGCATTCAGCAAACGAAACCCAGCACTGCCAGGGGGCTGCAGAGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp TGGTTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTaGCCCTCCCAGGTGGGGCTTCACCTGAGCCAAATGTGGAGCATG +
Preference number: 1 (lower is better)
Translates to: WLFKAGSTATLLQSG*PSQVGLHLSQMWSM
Trigger: CATGCTCCACATTTGGCTCAGGTGAAGCCCCACCTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp GCTGCATGGGAGCTGCAAGAGGTAGACATTGAGCAGAAGCGACACTaGGCTGGCATGTGCCTGCAGTGTACACAGGTACTTGGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: AAWELQEVDIEQKRH*AGMCLQCTQVLGPG
Trigger: GCCAGGGCCAAGTACCTGTGTACACTGCAGGCACATGCCAGCCCAGTGTCGCTTCTGCTCAATGTCTACCTCTTGCAGCTCCCATGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp AGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTaGACAAGGCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: RLQGTQPDQVGGVHS*TRQDSGKRTVFKGH
Trigger: GTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGCCTTGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp AGCCCCAAAGTGGTGCCCGGATATCACAAGGAGGGCAGACACAAATaGCACTCTCTCCTCTACAGACAGTTGCTGTACCTGCAATCGGCC +
Preference number: 1 (lower is better)
Translates to: SPKVVPGYHKEGRHK*HSLLYRQLLYLQSA
Trigger: GGCCGATTGCAGGTACAGCAACTGTCTGTAGAGGAGAGAGTGGCATTTGTGTCTGCCCTCCTTGTGATATCCGGGCACCACTTTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp TCCCTCAGCCAGGGCAGGACAGCCACCACACGGGAAGAACAAACATaGCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCC +
Preference number: 1 (lower is better)
Translates to: SLSQGRTATTREEQT*HSDTGTLVKQERVS
Trigger: GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTCTTCCCGTGTGGTGGCTGTCCTGCCCTGGCTGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 90 bp GGGTCTGTCCAAACGCAAGTCACAGCACTAAGGGAAAGGACGGGATaGAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGCAAG +
Preference number: 1 (lower is better)
Translates to: GSVQTQVTALRERTG*RCLCHMSWCQKRGK
Trigger: CTTGCCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCCCTTAGTGCTGTGACTTGCGTTTGGACAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp CCACCACACGGGAAGAACAAACATGCCACTCAGATACGGGAACTTTaGTCAAGCAGGAACGTGTTTCCAGCAGCTGGAGAGCAGGCACAC +
Preference number: 1 (lower is better)
Translates to: PPHGKNKHATQIREL*SSRNVFPAAGEQAH
Trigger: GTGTGCCTGCTCTCCAGCTGCTGGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTCTTCCCGTGTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp CCCATAAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTaGTGCCCGGATATCACAAGGAGGGCAGACACAAATGCCACTCTC +
Preference number: 1 (lower is better)
Translates to: PIKRSLCVIRQPAPK*CPDITRRADTNATL
Trigger: GAGAGTGGCATTTGTGTCTGCCCTCCTTGTGATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 90 bp ATAAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTaGCCGGATATCACAAGGAGGGCAGACACAAATGCCACTCTCTCC +
Preference number: 1 (lower is better)
Translates to: IKRSLCVIRQPAPKW*PDITRRADTNATLS
Trigger: GGAGAGAGTGGCATTTGTGTCTGCCCTCCTTGTGATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp GAACAGAGCTCTGGGAAGGGCAGCCATGCTGTCACCTTTTGTTGGTaGAGGGAAACGGTTTCTGTTTCCCTCTGTGGTACACAAATCGAC +
Preference number: 1 (lower is better)
Translates to: EQSSGKGSHAVTFCW*RETVSVSLCGTQID
Trigger: GTCGATTTGTGTACCACAGAGGGAAACAGAAACCGTTTCCCTCCACCAACAAAAGGTGACAGCATGGCTGCCCTTCCCAGAGCTCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp TTCCAGAGCACTTGGAATGGAACCCTGGGAATTCCACTGGAAAGTTaGTTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGG +
Preference number: 1 (lower is better)
Translates to: FQSTWNGTLGIPLES*LFKAGSTATLLQSG
Trigger: CCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAACCAACTTTCCAGTGGAATTCCCAGGGTTCCATTCCAAGTGCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp AGCTGCAAGACAAACAGTCAGCACCAGGCCCAGTCCCCAGGATTGTaGACAAACTCCACATACATAGATTGGACCCAGGGGATATCTTCT +
Preference number: 1 (lower is better)
Translates to: SCKTNSQHQAQSPGL*TNSTYIDWTQGISS
Trigger: AGAAGATATCCCCTGGGTCCAATCTATGTATGTGGAGTTTGTCCACAATCCTGGGGACTGGGCCTGGTGCTGACTGTTTGTCTTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp CCTCCTGGCCTCCCGCTCCTGGTGTCCCCCATCTCTTCCAAAGTGTaGACTCAAACTCTGATATTTCTTCCTAACCTTCCTATTAGTTTC +
Preference number: 1 (lower is better)
Translates to: PPGLPLLVSPISSKV*TQTLIFLPNLPISF
Trigger: GAAACTAATAGGAAGGTTAGGAAGAAATATCAGAGTTTGAGTCCACACTTTGGAAGAGATGGGGGACACCAGGAGCGGGAGGCCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 90 bp AAGGGGTCTACCTACCCTAGAGGAGGTTCTAGGCTCAAATCAAACTaGGTGGCCAGGGAGAGGAAGAGAATACAATGGTTTGAGCCAATA +
Preference number: 1 (lower is better)
Translates to: KGSTYPRGGSRLKSN*VARERKRIQWFEPI
Trigger: TATTGGCTCAAACCATTGTATTCTCTTCCTCTCCCTGGCCACTCAGTTTGATTTGAGCCTAGAACCTCCTCTAGGGTAGGTAGACCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 90 bp AGGCGGAATATTTATCATTTGAAAGTTAGACTCAGTGGCTCCTGCTaGGCGGAGATGAAGAGCTGTGAGGGAAATGGGTCTGTCCAAACG +
Preference number: 1 (lower is better)
Translates to: RRNIYHLKVRLSGSC*AEMKSCEGNGSVQT
Trigger: CGTTTGGACAGACCCATTTCCCTCACAGCTCTTCATCTCCGCTCAGCAGGAGCCACTGAGTCTAACTTTCAAATGATAAATATTCCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp GGTCTACCTACCCTAGAGGAGGTTCTAGGCTCAAATCAAACTGAGTaGCCAGGGAGAGGAAGAGAATACAATGGTTTGAGCCAATATTCC +
Preference number: 1 (lower is better)
Translates to: GLPTLEEVLGSNQTE*PGRGREYNGLSQYS
Trigger: GGAATATTGGCTCAAACCATTGTATTCTCTTCCTCTCCCTGGCCACTCAGTTTGATTTGAGCCTAGAACCTCCTCTAGGGTAGGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 90 bp TGTCACCTTTTGTTGGTGGAGGGAAACGGTTTCTGTTTCCCTCTGTaGTACACAAATCGACTTGTTCTCCATGAAGTAGGGTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: CHLLLVEGNGFCFPL*YTNRLVLHEVGSSS
Trigger: AGAGGAAGACCCTACTTCATGGAGAACAAGTCGATTTGTGTACCACAGAGGGAAACAGAAACCGTTTCCCTCCACCAACAAAAGGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 90 bp CGCTCCTGGTGTCCCCCATCTCTTCCAAAGTGTGGACTCAAACTCTaGTATTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAG +
Preference number: 1 (lower is better)
Translates to: RSWCPPSLPKCGLKL*YFFLTFLLVSQQDQ
Trigger: CTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAATATCAGAGTTTGAGTCCACACTTTGGAAGAGATGGGGGACACCAGGAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGGGCAAGGTCCCTCCCTaGTCTGGTCGGACACTGCTG +
Preference number: 2 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRGKVPP*SGRTLL
Trigger: CAGCAGTGTCCGACCAGAGCAGGGAGGGACCTTGCC...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp GCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCAAGGCCAAGGGCTaGGCAGCAAGGAGACATGCCCGCCCTTGCCACCACCCTAAGGGG +
Preference number: 2 (lower is better)
Translates to: AWAREQEEACAKAKG*AARRHARPCHHPKG
Trigger: CCCCTTAGGGTGGTGGCAAGGGCGGGCATGTCTCCTTGCTGCCAAGCCCTTGGCCTTGGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCTGGCACAGGCAGGCCTaGCCCCAGGGTCACACACAC +
Preference number: 2 (lower is better)
Translates to: PSSLREAPGLLGNSQHGAWHRQA*PQGHTH
Trigger: GTGTGTGTGACCCTGGGGCCAGGCCTGCCTGTGCCA...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGGGTCCCTCCCTGCTCTaGTCGGACACTGCTGGACAG +
Preference number: 2 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGGPSLL*SDTAGQ
Trigger: CTGTCCAGCAGTGTCCGACCAGAGCAGGGAGGGACC...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGCCTGCTTGCCTGCTCTaGAGCCCCCTGGCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPPACLL*SPLAVL
Trigger: CAGCACTGCCAGGGGGCTGCAGAGCAGGCAAGCAGG...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGGAGAGGTGGGGCCTCTaGCTGGCTCTGGCCCACACA +
Preference number: 2 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPERWGL*LALAHT
Trigger: TGTGTGGGCCAGAGCCAGCCAGAGGCCCCACCTCTC...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCGCTCTGGTCGGACACTaGTGGACAGACACGGGAGGG +
Preference number: 2 (lower is better)
Translates to: VTMQQVSAWAREQEEACAALVGH*WTDTGG
Trigger: CCCTCCCGTGTCTGTCCAGCAGTGTCCGACCAGAGC...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp CACCCCATCTCAGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCCTGGTCGGACACTGCTaGACAGACACGGGAGGGAAA +
Preference number: 2 (lower is better)
Translates to: HPISAQRAPQCQGKVPPCLVGHC*TDTGGK
Trigger: TTTCCCTCCCGTGTCTGTCCAGCAGTGTCCGACCAG...GCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCTGAGATGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCACTTTATCCAAACACTaGCACAGGCAGGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: PSSLREAPGLLGNSQHGATLSKH*HRQAWP
Trigger: GGGCCAGGCCTGCCTGTGCCAGTGTTTGGATAAAGT...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGGTGGAAAGGGCAGAGTaGGTACTGGGAGCCGGCACC +
Preference number: 2 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPVERAE*VLGAGT
Trigger: GGTGCCGGCTCCCAGTACCCACTCTGCCCTTTCCAC...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp GCCTGCTTGCCTGCTCTGCAGCCCCCTGGCAGTGCTGGGTTTCGTTaGCTGAATGCAGTGCTGATGGTGCAGTGGAGAGCTGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: ACLPALQPPGSAGFR*LNAVLMVQWRAGRW
Trigger: CCATCTGCCAGCTCTCCACTGCACCATCAGCACTGCATTCAGCAAACGAAACCCAGCACTGCCAGGGGGCTGCAGAGCAGGCAAGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGGCAGCCACCACTGGCTaGATGGGAGCTGCAAGAGGT +
Preference number: 2 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPAATTG*MGAARG
Trigger: ACCTCTTGCAGCTCCCATGCAGCCAGTGGTGGCTGC...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGGGTCCCACGCCTGCTTaGCTGCTCTGCAGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: GKDGMKVPVPYELVPKERGPTPA*LLCSPL
Trigger: CAGGGGGCTGCAGAGCAGGCAAGCAGGCGTGGGACC...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGTGGCCCTGGCCTCAGTaGCAGCCCAGAGGGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GKDGMKVPVPYELVPKERWPWPQ*QPRGPQ
Trigger: TTGGGGCCCTCTGGGCTGCCACTGAGGCCAGGGCCA...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp CACAAGGAGGGCAGACACAAATGCCACTCTCTCCTCTACAGACAGTaGCTGTACCTGCAATCGGCCACCTACCTGGCCGCGTGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: HKEGRHKCHSLLYRQ*LYLQSATYLAACPA
Trigger: GGCTGGGCACGCGGCCAGGTAGGTGGCCGATTGCAGGTACAGCAACTGTCTGTAGAGGAGAGAGTGGCATTTGTGTCTGCCCTCCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR TCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGGCAAGAGGTAGACATTaGGCAGAAGCGACACTGGGC +
Preference number: 2 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPARGRH*AEATLG
Trigger: GCCCAGTGTCGCTTCTGCTCAATGTCTACCTCTTGC...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR TCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGGGTGCCTGTGCCATATaGGCTGGTGCCAAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPGACAI*AGAKRE
Trigger: CTCTCTTTTGGCACCAGCTCATATGGCACAGGCACC...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGCCACGCCTGCTTGCCTaGTCTGCAGCCCCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRPRLLA*SAAPWQ
Trigger: CTGCCAGGGGGCTGCAGAGCAGGCAAGCAGGCGTGG...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGGGTCCCTCCCTGCTCTaGTCGGACACTGCTGGACAG +
Preference number: 2 (lower is better)
Translates to: GKDGMKVPVPYELVPKERGPSLL*SDTAGQ
Trigger: CTGTCCAGCAGTGTCCGACCAGAGCAGGGAGGGACC...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGGTGTACACAGGTACTTaGCCCTGGCCTCAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQVYTGT*PWPQWQ
Trigger: CTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACAC...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGGGTGGGGCCTCTGGCTaGCTCTGGCCCACACAGAGC +
Preference number: 2 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRGGASG*LWPTQS
Trigger: GCTCTGTGTGGGCCAGAGCCAGCCAGAGGCCCCACC...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR TCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCGAGGGGGAGGGGGTATaGAGCTGGAAGAACAGACTC +
Preference number: 2 (lower is better)
Translates to: RILGLRYICGSPAPRQEGEGEGV*SWKNRL
Trigger: GAGTCTGTTCTTCCAGCTTCATACCCCCTCCCCCTC...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGCACTGGGCTGGCATGTaGCTGCAGTGTACACAGGTA +
Preference number: 2 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQHWAGM*LQCTQV
Trigger: TACCTGTGTACACTGCAGGCACATGCCAGCCCAGTG...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGTTGCGGGCACAGGAGTaGGGAGGCGGCGGCGACTTC +
Preference number: 2 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALLRAQE*GGGGDF
Trigger: GAAGTCGCCGCCGCCTCCCCACTCCTGTGCCCGCAA...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR TCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCGCAAGAGGTAGACATTaGGCAGAAGCGACACTGGGC +
Preference number: 2 (lower is better)
Translates to: RILGLRYICGSPAPRQEGARGRH*AEATLG
Trigger: GCCCAGTGTCGCTTCTGCTCAATGTCTACCTCTTGC...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTCCATCTCAGCCAGGATaGCCCCTCTCTAGTTACAGA +
Preference number: 2 (lower is better)
Translates to: QVTMQQVSAWAREQEEACPSQPG*PLSSYR
Trigger: TCTGTAACTAGAGAGGGGGCATCCTGGCTGAGATGG...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGAGCAGAAATGCTGGGTaGCCTAGGAGTCAAACCCAG +
Preference number: 2 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQSRNAG*PRSQTQ
Trigger: CTGGGTTTGACTCCTAGGCCACCCAGCATTTCTGCT...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGTCAAATCAAACTGAGTaGCCAGGGAGAGGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGSNQTE*PGRGRE
Trigger: TTCTCTTCCTCTCCCTGGCCACTCAGTTTGATTTGA...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp GGGGCACCGGTCTGGCAGGGTCCAGTCTTCTATAGGTGCCATGTTTaGTCTGCAGGACACTTCTGGGGCATAGCTCTGGGTTGCAAAGTA +
Preference number: 2 (lower is better)
Translates to: GAPVWQGPVFYRCHV*SAGHFWGIALGCKV
Trigger: TACTTTGCAACCCAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGACTGGACCCTGCCAGACCGGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp GCCACCACACGGGAAGAACAAACATGCCACTCAGATACGGGAACTTaGGTCAAGCAGGAACGTGTTTCCAGCAGCTGGAGAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: ATTREEQTCHSDTGT*VKQERVSSSWRAGT
Trigger: TGTGCCTGCTCTCCAGCTGCTGGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTCTTCCCGTGTGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATCTGGTCGGACACTGCTaGACAGACACGGGAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KAISLCHKTASPKVVPGYLVGHC*TDTGGK
Trigger: TTTCCCTCCCGTGTCTGTCCAGCAGTGTCCGACCAG...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp CAGAGCACTTGGAATGGAACCCTGGGAATTCCACTGGAAAGTTGGTaGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: QSTWNGTLGIPLESW*FKAGSTATLLQSGC
Trigger: GCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAACCAACTTTCCAGTGGAATTCCCAGGGTTCCATTCCAAGTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATGACAGTTGCTGTACCTaGAATCGGCCACCTACCTGG +
Preference number: 2 (lower is better)
Translates to: KAISLCHKTASPKVVPGYDSCCT*NRPPTW
Trigger: CCAGGTAGGTGGCCGATTGCAGGTACAGCAACTGTC...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCCCTGCTTGCCTGCTCTaGAGCCCCCTGGCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: FLPNLPISFPTRSELNRAPACLL*SPLAVL
Trigger: CAGCACTGCCAGGGGGCTGCAGAGCAGGCAAGCAGG...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCCACCTCCTCCAGACTTaGGGGCACCGGTCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: FLPNLPISFPTRSELNRAHLLQT*GHRSGR
Trigger: CCTGCCAGACCGGTGCCCCCAAGTCTGGAGGAGGTG...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp GACAGCTGCAAGACAAACAGTCAGCACCAGGCCCAGTCCCCAGGATaGTGGACAAACTCCACATACATAGATTGGACCCAGGGGATATCT +
Preference number: 2 (lower is better)
Translates to: DSCKTNSQHQAQSPG*WTNSTYIDWTQGIS
Trigger: AGATATCCCCTGGGTCCAATCTATGTATGTGGAGTTTGTCCACAATCCTGGGGACTGGGCCTGGTGCTGACTGTTTGTCTTGCAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp ATGAACCTCCACAACCCAAAATCTCAGCTCTGTGCAATCCAGAAACATAAAGGGGCTCTGGTCGGACACTaGTGGACAGACACGGGAGGG +
Preference number: 2 (lower is better)
Translates to: MNLHNPKSQLCAIQKHKGALVGH*WTDTGG
Trigger: CCCTCCCGTGTCTGTCCAGCAGTGTCCGACCAGAGC...CCCTTTATGTTTCTGGATTGCACAGAGCTGAGATTTTGGGTTGTGGAGGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCTCAAATCAAACTGAGTaGCCAGGGAGAGGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: RILGLRYICGSPAPRQEGSNQTE*PGRGRE
Trigger: TTCTCTTCCTCTCCCTGGCCACTCAGTTTGATTTGA...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GAACAAACATGCCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCCCCACCACTGGCTGCATaGGAGCTGCAAGAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: EQTCHSDTGTLVKQERVSPPLAA*ELQEVD
Trigger: GTCTACCTCTTGCAGCTCCCATGCAGCCAGTGGTGG...GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCCGTGTTTCCAGCAGCTaGAGAGCAGGCACACCAGGA +
Preference number: 2 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPRVSSS*RAGTPG
Trigger: TCCTGGTGTGCCTGCTCTCCAGCTGCTGGAAACACG...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp CCAGGCCCAGTCCCCAGGATTGTGGACAAACTCCACATACATAGATaGGACCCAGGGGATATCTTCTCCCATAAAGCGATCTCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: PGPVPRIVDKLHIHR*DPGDIFSHKAISLC
Trigger: ACACAGAGAGATCGCTTTATGGGAGAAGATATCCCCTGGGTCCAATCTATGTATGTGGAGTTTGTCCACAATCCTGGGGACTGGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATGAGGGCAGACACAAATaGCACTCTCTCCTCTACAGA +
Preference number: 2 (lower is better)
Translates to: KAISLCHKTASPKVVPGYEGRHK*HSLLYR
Trigger: TCTGTAGAGGAGAGAGTGGCATTTGTGTCTGCCCTC...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GAACAAACATGCCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCCGGAGGAGTCCACAGCTaGACAAGGCAAGATTCAGGG +
Preference number: 2 (lower is better)
Translates to: EQTCHSDTGTLVKQERVSGGVHS*TRQDSG
Trigger: CCCTGAATCTTGCCTTGTGCAGCTGTGGACTCCTCC...GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGCCATCTCAGCCAGGATaGCCCCTCTCTAGTTACAGA +
Preference number: 2 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALPSQPG*PLSSYR
Trigger: TCTGTAACTAGAGAGGGGGCATCCTGGCTGAGATGG...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp GAACAAACATGCCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCCCACTGGGCTGGCATGTaGCTGCAGTGTACACAGGTA +
Preference number: 2 (lower is better)
Translates to: EQTCHSDTGTLVKQERVSHWAGM*LQCTQV
Trigger: TACCTGTGTACACTGCAGGCACATGCCAGCCCAGTG...GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTACTTTATCCAAACACTaGCACAGGCAGGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: ARFREEDCLQGPQENKDTTLSKH*HRQAWP
Trigger: GGGCCAGGCCTGCCTGTGCCAGTGTTTGGATAAAGT...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCACAGGTACTTGGCCCTaGCCTCAGTGGCAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: FLPNLPISFPTRSELNRATGTWP*PQWQPR
Trigger: TCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGT...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 90 bp GAGGCACCAGCACACCTCCTGGAGAACACCGGGAATAGGTTCCTTTaGTCTCTGACTCAACTCAACAAAGCACTAGTAGGAATCACACAC +
Preference number: 2 (lower is better)
Translates to: EAPAHLLENTGNRFL*SLTQLNKALVGITH
Trigger: GTGTGTGATTCCTACTAGTGCTTTGTTGAGTTGAGTCAGAGACAAAAGGAACCTATTCCCGGTGTTCTCCAGGAGGTGTGCTGGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGAGGAAACAGGACAGCTaGAAGACAAACAGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRRKQDS*KTNSQH
Trigger: GTGCTGACTGTTTGTCTTGCAGCTGTCCTGTTTCCT...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAATGGCACAGGCAGGCCTaGCCCCAGGGTCACACACAC +
Preference number: 2 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKWHRQA*PQGHTH
Trigger: GTGTGTGTGACCCTGGGGCCAGGCCTGCCTGTGCCA...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCGACAGTTGCTGTACCTaGAATCGGCCACCTACCTGG +
Preference number: 2 (lower is better)
Translates to: FLPNLPISFPTRSELNRADSCCT*NRPPTW
Trigger: CCAGGTAGGTGGCCGATTGCAGGTACAGCAACTGTC...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCGGAGGAGTCCACAGCTaGACAAGGCAAGATTCAGGG +
Preference number: 2 (lower is better)
Translates to: FLPNLPISFPTRSELNRAGGVHS*TRQDSG
Trigger: CCCTGAATCTTGCCTTGTGCAGCTGTGGACTCCTCC...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCAATGTGGAGCATGCCTaGAAAAGTGGCACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: FLPNLPISFPTRSELNRANVEHA*KSGTSS
Trigger: GGAGGAGGTGCCACTTTTGCAGGCATGCTCCACATT...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCCAGGAGCTGGCAGGCTaGAGAAGACATTTGAGTGGA +
Preference number: 2 (lower is better)
Translates to: FLPNLPISFPTRSELNRAQELAG*RRHLSG
Trigger: TCCACTCAAATGTCTTCTCCAGCCTGCCAGCTCCTG...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR TCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCGGTTCCTTTTGTCTCTaGCTCAACTCAACAAAGCAC +
Preference number: 2 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPGSFCL*LNSTKH
Trigger: GTGCTTTGTTGAGTTGAGTCAGAGACAAAAGGAACC...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAAGAAGCGACACTGGGCTaGCATGTGCCTGCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKEATLG*HVPAVY
Trigger: GTACACTGCAGGCACATGCCAGCCCAGTGTCGCTTC...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAATGGAGAGCTGGCAGATaGAACAGGATGGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKWRAGR*NRMGRG
Trigger: CCCTCTGCCCATCCTGTTCCATCTGCCAGCTCTCCA...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR GCA 90 bp ATGAACCTCCACAACCCAAAATCTCAGCTCTGTGCAATCCAGAAACATAAAGGGAGGAAACAGGACAGCTaGAAGACAAACAGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: MNLHNPKSQLCAIQKHKGRKQDS*KTNSQH
Trigger: GTGCTGACTGTTTGTCTTGCAGCTGTCCTGTTTCCT...CCCTTTATGTTTCTGGATTGCACAGAGCTGAGATTTTGGGTTGTGGAGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGAGGAAGAGAATACAATaGTTTGAGCCAATATTCCAT +
Preference number: 2 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALRKRIQ*FEPIFH
Trigger: ATGGAATATTGGCTCAAACCATTGTATTCTCTTCCT...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CCA 90 bp GAACAAACATGCCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCCAGGAAGAGAATACAATaGTTTGAGCCAATATTCCAT +
Preference number: 2 (lower is better)
Translates to: EQTCHSDTGTLVKQERVSRKRIQ*FEPIFH
Trigger: ATGGAATATTGGCTCAAACCATTGTATTCTCTTCCT...GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR TCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAAGGTTCCTTTTGTCTCTaGCTCAACTCAACAAAGCAC +
Preference number: 2 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKGSFCL*LNSTKH
Trigger: GTGCTTTGTTGAGTTGAGTCAGAGACAAAAGGAACC...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 72 bp GCGGGCACAGGAGTGGGGAGGCGGCGGCGACTTCACTaGGACAACCCGGGTTTCACCCCATCTCAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: AGTGVGRRRRLH*DNPGFTPSQPR
Trigger: TCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCCGCCTCCCCACTCCTGTGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp GGATGTGGAGGAGGAAGCAGAAGCTGGTCCCACGCCTaGTTGCCTGCTCTGCAGCCCCCTGGCAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GCGGGSRSWSHA*LPALQPPGSAG
Trigger: CCCAGCACTGCCAGGGGGCTGCAGAGCAGGCAAGCAGGCGTGGGACCAGCTTCTGCTTCCTCCTCCACATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp CCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTaGCAGCCCAGAGGGCCCCAAGACACCCAGGTGACC +
Preference number: 3 (lower is better)
Translates to: PAVYTGTWPWPQ*QPRGPQDTQVT
Trigger: GGTCACCTGGGTGTCTTGGGGCCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp TGGCATGTGCCTGCAGTGTACACAGGTACTTGGCCCTaGCCTCAGTGGCAGCCCAGAGGGCCCCAAGACACC +
Preference number: 3 (lower is better)
Translates to: WHVPAVYTGTWP*PQWQPRGPQDT
Trigger: GGTGTCTTGGGGCCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCACATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGCTCCACATACATAGATaGGACCCAGGGGATATCTTC +
Preference number: 3 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRLHIHR*DPGDIF
Trigger: GAAGATATCCCCTGGGTCCAATCTATGTATGTGGAG...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGACCCCTGACTCCAGCTaGCGGGCACAGGAGTGGGGA +
Preference number: 3 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQTPDSS*RAQEWG
Trigger: TCCCCACTCCTGTGCCCGCAAGCTGGAGTCAGGGGT...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp GCCAAGGGCTTGGCAGCAAGGAGACATGCCCGCCCTTaGCACCACCCTAAGGGGTCTACCTACCCTAGAGGA +
Preference number: 3 (lower is better)
Translates to: AKGLAARRHARP*HHPKGSTYPRG
Trigger: TCCTCTAGGGTAGGTAGACCCCTTAGGGTGGTGGCAAGGGCGGGCATGTCTCCTTGCTGCCAAGCCCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp AGGAGGAAGCAGAAGCTGGTCCCACGCCTGCTTGCCTaGTCTGCAGCCCCCTGGCAGTGCTGGGTTTCGTTT +
Preference number: 3 (lower is better)
Translates to: RRKQKLVPRLLA*SAAPWQCWVSF
Trigger: AAACGAAACCCAGCACTGCCAGGGGGCTGCAGAGCAGGCAAGCAGGCGTGGGACCAGCTTCTGCTTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp AAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTaGCCCTCCCAGGTGGGGCTTCACCTGAGCCAAATG +
Preference number: 3 (lower is better)
Translates to: KAGSTATLLQSG*PSQVGLHLSQM
Trigger: CATTTGGCTCAGGTGAAGCCCCACCTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp ACAGACAGTTGCTGTACCTGCAATCGGCCACCTACCTaGCCGCGTGCCCAGCCAGCGCTAGGGGCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: TDSCCTCNRPPT*PRAQPALGASL
Trigger: AAGAGAAGCCCCTAGCGCTGGCTGGGCACGCGGCCAGGTAGGTGGCCGATTGCAGGTACAGCAACTGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp CTGGTCCCACGCCTGCTTGCCTGCTCTGCAGCCCCCTaGCAGTGCTGGGTTTCGTTTGCTGAATGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: LVPRLLACSAAP*QCWVSFAECSA
Trigger: AGCACTGCATTCAGCAAACGAAACCCAGCACTGCCAGGGGGCTGCAGAGCAGGCAAGCAGGCGTGGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp AAAGGGGTTATCCAAGCGAAAGAGAGGTGGGGCCTCTaGCTGGCTCTGGCCCACACAGAGCCCTGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: KGVIQAKERWGL*LALAHTEPCPR
Trigger: CCTGGGACAGGGCTCTGTGTGGGCCAGAGCCAGCCAGAGGCCCCACCTCTCTTTCGCTTGGATAACCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCACCCCTGACTCCAGCTaGCGGGCACAGGAGTGGGGA +
Preference number: 3 (lower is better)
Translates to: RILGLRYICGSPAPRQEGTPDSS*RAQEWG
Trigger: TCCCCACTCCTGTGCCCGCAAGCTGGAGTCAGGGGT...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp CCACGCCTGCTTGCCTGCTCTGCAGCCCCCTGGCAGTaGTGGGTTTCGTTTGCTGAATGCAGTGCTGATGGT +
Preference number: 3 (lower is better)
Translates to: PRLLACSAAPWQ*WVSFAECSADG
Trigger: ACCATCAGCACTGCATTCAGCAAACGAAACCCAGCACTGCCAGGGGGCTGCAGAGCAGGCAAGCAGGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp AGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCTCTaGTCGGACACTGCTGGACAGACACGGGAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: SSPMSGQGPSLL*SDTAGQTREGK
Trigger: TTTTCCCTCCCGTGTCTGTCCAGCAGTGTCCGACCAGAGCAGGGAGGGACCTTGCCCTGACATTGGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp GGAACAGGAGCTGGCAGGCTGGAGAAGACATTTGAGTaGAAAGGGCAGAGTGGGTACTGGGAGCCGGCACCC +
Preference number: 3 (lower is better)
Translates to: GTGAGRLEKTFE*KGQSGYWEPAP
Trigger: GGGTGCCGGCTCCCAGTACCCACTCTGCCCTTTCCACTCAAATGTCTTCTCCAGCCTGCCAGCTCCTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGAGTGTACACAGGTACTaGGCCCTGGCCTCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPSVHRY*ALASVA
Trigger: TGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACT...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp GTCAGGGCAAGGTCCCTCCCTGCTCTGGTCGGACACTaGTGGACAGACACGGGAGGGAAAAAGCAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: VRARSLPALVGH*WTDTGGKKQEN
Trigger: GTTTTCCTGCTTTTTCCCTCCCGTGTCTGTCCAGCAGTGTCCGACCAGAGCAGGGAGGGACCTTGCCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp GCAGCCCCCTGGCAGTGCTGGGTTTCGTTTGCTGAATaGAGTGCTGATGGTGCAGTGGAGAGCTGGCAGATG +
Preference number: 3 (lower is better)
Translates to: AAPWQCWVSFAE*SADGAVESWQM
Trigger: CATCTGCCAGCTCTCCACTGCACCATCAGCACTGCATTCAGCAAACGAAACCCAGCACTGCCAGGGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp GGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTaGACAAGGCAAGATTCAGGGAAGAGGACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: GTQPDQVGGVHS*TRQDSGKRTVF
Trigger: GAAGACAGTCCTCTTCCCTGAATCTTGCCTTGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGGCCCAGTCCCCAGGATaGTGGACAAACTCCACATAC +
Preference number: 3 (lower is better)
Translates to: GKDGMKVPVPYELVPKERAQSPG*WTNSTY
Trigger: GTATGTGGAGTTTGTCCACAATCCTGGGGACTGGGC...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp GTGGTGCCCGGATATCACAAGGAGGGCAGACACAAATaGCACTCTCTCCTCTACAGACAGTTGCTGTACCTG +
Preference number: 3 (lower is better)
Translates to: VVPGYHKEGRHK*HSLLYRQLLYL
Trigger: CAGGTACAGCAACTGTCTGTAGAGGAGAGAGTGGCATTTGTGTCTGCCCTCCTTGTGATATCCGGGCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR GCA 72 bp TCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTaGCCGGATATCACAAGGAGGGCAGACACAAATGCC +
Preference number: 3 (lower is better)
Translates to: SLCVIRQPAPKW*PDITRRADTNA
Trigger: GGCATTTGTGTCTGCCCTCCTTGTGATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 72 bp CAAACGCAAGTCACAGCACTAAGGGAAAGGACGGGATaGAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAG +
Preference number: 3 (lower is better)
Translates to: QTQVTALRERTG*RCLCHMSWCQK
Trigger: CTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCCCTTAGTGCTGTGACTTGCGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp CGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTaGTGCCCGGATATCACAAGGAGGGCAGACACAAAT +
Preference number: 3 (lower is better)
Translates to: RSLCVIRQPAPK*CPDITRRADTN
Trigger: ATTTGTGTCTGCCCTCCTTGTGATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp TCTGGGAAGGGCAGCCATGCTGTCACCTTTTGTTGGTaGAGGGAAACGGTTTCTGTTTCCCTCTGTGGTACA +
Preference number: 3 (lower is better)
Translates to: SGKGSHAVTFCW*RETVSVSLCGT
Trigger: TGTACCACAGAGGGAAACAGAAACCGTTTCCCTCCACCAACAAAAGGTGACAGCATGGCTGCCCTTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGGGCTGGAGAAGACATTaGAGTGGAAAGGGCAGAGTG +
Preference number: 3 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRGWRRH*SGKGRV
Trigger: CACTCTGCCCTTTCCACTCAAATGTCTTCTCCAGCC...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGAGGCAGGAAGGCTGTTaGTCTGAATGCATGAAAATA +
Preference number: 3 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQRQEGC*SECMKI
Trigger: TATTTTCATGCATTCAGACAAACAGCCTTCCTGCCT...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp CTAAAATATCACAGGACCATCCACCACAGAGTGGACTaGAAGTTACACACAGGGACAGGCAGACCGCAGACA +
Preference number: 3 (lower is better)
Translates to: LKYHRTIHHRVD*KLHTGTGRPQT
Trigger: TGTCTGCGGTCTGCCTGTCCCTGTGTGTAACTTCCAGTCCACTCTGTGGTGGATGGTCCTGTGATATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp ACTTGGAATGGAACCCTGGGAATTCCACTGGAAAGTTaGTTGTTTAAGGCGGGGTCAACTGCAACGCTCCTA +
Preference number: 3 (lower is better)
Translates to: TWNGTLGIPLES*LFKAGSTATLL
Trigger: TAGGAGCGTTGCAGTTGACCCCGCCTTAAACAACCAACTTTCCAGTGGAATTCCCAGGGTTCCATTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp TCCAGAGCACTTGGAATGGAACCCTGGGAATTCCACTaGAAAGTTGGTTGTTTAAGGCGGGGTCAACTGCAA +
Preference number: 3 (lower is better)
Translates to: SRALGMEPWEFH*KVGCLRRGQLQ
Trigger: TTGCAGTTGACCCCGCCTTAAACAACCAACTTTCCAGTGGAATTCCCAGGGTTCCATTCCAAGTGCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp CTCCCGCTCCTGGTGTCCCCCATCTCTTCCAAAGTGTaGACTCAAACTCTGATATTTCTTCCTAACCTTCCT +
Preference number: 3 (lower is better)
Translates to: LPLLVSPISSKV*TQTLIFLPNLP
Trigger: AGGAAGGTTAGGAAGAAATATCAGAGTTTGAGTCCACACTTTGGAAGAGATGGGGGACACCAGGAGCGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp ACCCTAGAGGAGGTTCTAGGCTCAAATCAAACTGAGTaGCCAGGGAGAGGAAGAGAATACAATGGTTTGAGC +
Preference number: 3 (lower is better)
Translates to: TLEEVLGSNQTE*PGRGREYNGLS
Trigger: GCTCAAACCATTGTATTCTCTTCCTCTCCCTGGCCACTCAGTTTGATTTGAGCCTAGAACCTCCTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTCTCCACATACATAGATaGGACCCAGGGGATATCTTC +
Preference number: 3 (lower is better)
Translates to: ARFREEDCLQGPQENKDTLHIHR*DPGDIF
Trigger: GAAGATATCCCCTGGGTCCAATCTATGTATGTGGAG...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 72 bp ACCTACCCTAGAGGAGGTTCTAGGCTCAAATCAAACTaGGTGGCCAGGGAGAGGAAGAGAATACAATGGTTT +
Preference number: 3 (lower is better)
Translates to: TYPRGGSRLKSN*VARERKRIQWF
Trigger: AAACCATTGTATTCTCTTCCTCTCCCTGGCCACTCAGTTTGATTTGAGCCTAGAACCTCCTCTAGGGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp TCCCCAGGATTGTGGACAAACTCCACATACATAGATTaGACCCAGGGGATATCTTCTCCCATAAAGCGATCT +
Preference number: 3 (lower is better)
Translates to: SPGLWTNSTYID*TQGISSPIKRS
Trigger: AGATCGCTTTATGGGAGAAGATATCCCCTGGGTCCAATCTATGTATGTGGAGTTTGTCCACAATCCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CCA 72 bp TTGTTGGTGGAGGGAAACGGTTTCTGTTTCCCTCTGTaGTACACAAATCGACTTGTTCTCCATGAAGTAGGG +
Preference number: 3 (lower is better)
Translates to: LLVEGNGFCFPL*YTNRLVLHEVG
Trigger: CCCTACTTCATGGAGAACAAGTCGATTTGTGTACCACAGAGGGAAACAGAAACCGTTTCCCTCCACCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR-3UTR CAA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGCGGAATATTTATCATTaGAAAGTTAGACTCAGTGGC +
Preference number: 3 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRRNIYH*KVRLSG
Trigger: GCCACTGAGTCTAACTTTCAAATGATAAATATTCCG...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 72 bp ATTTATCATTTGAAAGTTAGACTCAGTGGCTCCTGCTaGGCGGAGATGAAGAGCTGTGAGGGAAATGGGTCT +
Preference number: 3 (lower is better)
Translates to: IYHLKVRLSGSC*AEMKSCEGNGS
Trigger: AGACCCATTTCCCTCACAGCTCTTCATCTCCGCTCAGCAGGAGCCACTGAGTCTAACTTTCAAATGATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 72 bp GTTCTCAGAGAAGGAAGAGGCGGAATATTTATCATTTaGAAGTTAGACTCAGTGGCTCCTGCTGAGCGGAGA +
Preference number: 3 (lower is better)
Translates to: VLREGRGGIFII*KLDSVAPAERR
Trigger: TCTCCGCTCAGCAGGAGCCACTGAGTCTAACTTTCAAATGATAAATATTCCGCCTCTTCCTTCTCTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR TCA 72 bp TGTCCCCCATCTCTTCCAAAGTGTGGACTCAAACTCTaGTATTTCTTCCTAACCTTCCTATTAGTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: CPPSLPKCGLKL*YFFLTFLLVSQ
Trigger: TTGGGAAACTAATAGGAAGGTTAGGAAGAAATATCAGAGTTTGAGTCCACACTTTGGAAGAGATGGGGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGGCACGTGGTCCTGGCTaGTACCGAGGCAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRARGPG*YRGSPR
Trigger: ACGAGGGCTGCCTCGGTACCAGCCAGGACCACGTGC...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCGCTCGGGCTTGGGGTTaGCGGCCGGTGGGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSSLREAPGLLGNSQHGAARAWG*RPVGPA
Trigger: AGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGC...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGTGCCGCCAGGTGTGCTaGGTAGCCTTCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRCRQVC*VAFAQE
Trigger: TTCCTGAGCGAAGGCTACGCAGCACACCTGGCGGCA...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGCAGGGCTCAGAGCTGTaGGGTCCAGACCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRQGSEL*GPDQCS
Trigger: AGAGCACTGGTCTGGACCCCACAGCTCTGAGCCCTG...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGGCTGTCCGAGGACTCTaGACTGTCGCTATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRAVRGL*TVAMGA
Trigger: AGCTCCCATAGCGACAGTTCAGAGTCCTCGGACAGC...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGCGCAGAAATTCTGGCTaGGCGTGCAGCCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRRRNSG*ACSPKL
Trigger: CAGCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCG...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGCCTACAATGAAGATCTaGGAGGCAGGGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRPTMKI*EAGRPS
Trigger: GCTGGGCCTCCCTGCCTCCCAGATCTTCATTGTAGG...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGTTGTCGGACTCGGGCTaGCTCTGCGCCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGLSDSG*LCARSG
Trigger: GCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAA...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGGGCAGCGGCCGCTCGTaGTCCTTGTCGGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGGSGRS*SLSDSG
Trigger: GCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCC...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGTCCCCTTCCGGCTGCTaGTGCCAGGGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGSPSGC*CQGCPL
Trigger: CAGGGGACAGCCCTGGCAGCAGCAGCCGGAAGGGGA...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGGGTTGCGAAGGAAGATaGCCTTCTGCCTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRGCEGR*PSASVG
Trigger: ACCCACTGAGGCAGAAGGCCATCTTCCTTCGCAACC...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CACCCCATCTCAGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCGGTAGCGAGGCACGCTaGCAGGAGGCACCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HPISAQRAPQCQGKVPPCGSEAR*QEAPGG
Trigger: TCCACCTGGTGCCTCCTGTCAGCGTGCCTCGCTACC...GCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCTGAGATGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGAGGGGGCTGTGGGTGTaGAGGGCATCAGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGRGLWV*RASASR
Trigger: CCTGCTCGCTGATGCCCTGCACACCCACAGCCCCCT...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGCCTTGCGCAGGATCATaGGCGAGTTGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRPCAGS*ASCSSW
Trigger: CCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGG...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGAACTGGCACTGGGTTTaGTACTTCTTGGTGGACCGG +
Preference number: 4 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRNWHWV*YFLVDR
Trigger: CCGGTCCACCAAGAAGTACCAAACCCAGTGCCAGTT...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CACCCCATCTCAGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCGGCGAGAGCGGTGGCTaGCTTCTAGTGCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HPISAQRAPQCQGKVPPCGESGG*LLVPPG
Trigger: ACCTGGCGGCACTAGAAGCCAGCCACCGCTCTCGCC...GCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCTGAGATGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGGGGTTGGCGGCCGGTaGGTCCGGCTGCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: QVTMQQVSAWAREQEEACGVGGR*VRLLHR
Trigger: TCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCC...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCTGCTCCCCTTCCGGCTaGTGCTGCCAGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACACSPSG*CCQGCP
Trigger: GGGACAGCCCTGGCAGCAGCAGCCGGAAGGGGAGCA...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGGGCCTTCTGCCTCAGTaGGTCGTGCACCAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGGLLPQ*VVHQSV
Trigger: GACGGACTGGTGCACGACCCACTGAGGCAGAAGGCC...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGTTGTCGGACTCGGGCTaGCTCTGCGCCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQLSDSG*LCARSG
Trigger: GCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAA...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACAGCCAGGGCTGTCCCCTaGGGGTCCCGCACTGTAGCA +
Preference number: 4 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTARAVP*GSRTVA
Trigger: TGCTACAGTGCGGGACCCTCAGGGGACAGCCCTGGC...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCGCAGGATGCTGGATGTaGACGCTGTGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GGDFTETTRVSPHLSPESAGCWM*TLWPRL
Trigger: GAGACGGGGCCACAGCGTGCACATCCAGCATCCTGC...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075258.13
CDS-3UTR GCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGCGTGCAGCCCAAAGCTaGCCTTGCGCAGGATCATGC +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGRAAQS*PCAGSC
Trigger: GCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACG...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGGCAGCCAGGGGCACGTaGTCCTGGCTGGTACCGAGG +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQAARGT*SWLVPR
Trigger: CCTCGGTACCAGCCAGGACCACGTGCCCCTGGCTGC...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGGAGGCAACGGCCTCTTaGGGTCCTCATCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGEATAS*GPHPPL
Trigger: GAGTGGAGGATGAGGACCCCAAGAGGCCGTTGCCTC...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCTCTCCAGCACAGAGCTaGAAGTGTGAATGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PSSLREAPGLLGNSQHGASPAQS*KCECRP
Trigger: CGGCCGACATTCACACTTTCAGCTCTGTGCTGGAGA...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCTGTCCTGGGTACTGCTaGTGCTCCCCTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACACPGYC*CSPSGC
Trigger: GCAGCCGGAAGGGGAGCATCAGCAGTACCCAGGACA...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGGGTAGCGAGGCACGCTaGCAGGAGGCACCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQGSEAR*QEAPGG
Trigger: TCCACCTGGTGCCTCCTGTCAGCGTGCCTCGCTACC...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTCCGAACCACATCCACTaGACCTGGCCGGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPPNHIH*TWPDLG
Trigger: CCCAAGGTCCGGCCAGGTGCAGTGGATGTGGTTCGG...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGAGGGCAGCAGGGAAGTaGGCGCGCATGACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPRAAGK*ARMTFS
Trigger: GGAGAAGGTCATGCGCGCCCACTTCCCTGCTGCCCT...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGCTGACCTCAGAGAGCTaGGGGGTGCCAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPLTSES*GVPAAG
Trigger: TCCTGCAGCTGGCACCCCCCAGCTCTCTGAGGTCAG...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGGCACTGTCCTCCGCATaGCCAGGACCAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQALSSA*PGPGPV
Trigger: CACTGGGCCTGGTCCTGGCCATGCGGAGGACAGTGC...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACATGTGCGCTGGAATCTTaGGGCCTGAGGGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTCALES*GLRGRG
Trigger: GCCTCGCCCCCTCAGGCCCCAAGATTCCAGCGCACA...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTGGCCTTCTGCCTCAGTaGGTCGTGCACCAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPGLLPQ*VVHQSV
Trigger: GACGGACTGGTGCACGACCCACTGAGGCAGAAGGCC...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTGCTGCTGCACCGACATaGTCCTGCGCAGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPAAAPT*SCAGGC
Trigger: GCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGC...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp AGGGTCACACACACAAACATTACCCCTGACTCCAGCTaGCGGGCACAGGAGTGGGGAGGCGGCGGCGACTTC +
Preference number: 4 (lower is better)
Translates to: RVTHTNITPDSS*RAQEWGGGGDF
Trigger: GAAGTCGCCGCCGCCTCCCCACTCCTGTGCCCGCAAGCTGGAGTCAGGGGTAATGTTTGTGTGTGTGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGTCTCCACCGAATCACTaGGGACATTCCGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGSPPNH*GHSEGA
Trigger: GGCACCTTCGGAATGTCCTCAGTGATTCGGTGGAGA...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCACTGGAGTGGATGCTTaGGAGGAAGGCATGATGCTG +
Preference number: 4 (lower is better)
Translates to: PSSLREAPGLLGNSQHGATGVDA*EEGMML
Trigger: CAGCATCATGCCTTCCTCTCAAGCATCCACTCCAGT...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGCGGTGTCCAGGACGTTaGCCCCATGCAGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQRCPGR*PHAAPA
Trigger: TGCTGGTGCTGCATGGGGGCAACGTCCTGGACACCG...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCAGGAATAGGGGGCTGTaGGTGTGCAGGGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACARNRGL*VCRASA
Trigger: CGCTGATGCCCTGCACACCCACAGCCCCCTATTCCT...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGCAGGGCTCAGAGCTGTaGGGTCCAGACCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPQGSEL*GPDQCS
Trigger: AGAGCACTGGTCTGGACCCCACAGCTCTGAGCCCTG...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCGGCGAGAGCGGTGGCTaGCTTCTAGTGCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGGESGG*LLVPPG
Trigger: ACCTGGCGGCACTAGAAGCCAGCCACCGCTCTCGCC...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCGGGGCACATTGTATGTaGTTCTGCCACTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSSLREAPGLLGNSQHGAGAHCM*FCHCCW
Trigger: CCAACAACAGTGGCAGAATCACATACAATGTGCCCC...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCTGCTGCTGGCCAGACTaGAGTCCTCTTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACACCWPD*SPLPPP
Trigger: TGGTGGTGGAAGAGGACTGCAGTCTGGCCAGCAGCA...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGCCCTGTGGGAAGTTGTaGTGGGACAGCCACGACACC +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQPCGKL*WDSHDT
Trigger: GGTGTCGTGGCTGTCCCAGCACAACTTCCCACAGGG...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTAATTCTGGCTGCGCGTaGAGCCCAAAGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPNSGCA*SPKLPL
Trigger: CAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAATT...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGGACTCGGGCTGGCTCTaGGCCCGCTCGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALDSGWL*ARSGLG
Trigger: CCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTC...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CACCCCATCTCAGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCAAGCCTCCGAGCAGATaGCAGGACAAGGGACAAACT +
Preference number: 4 (lower is better)
Translates to: HPISAQRAPQCQGKVPPCKPPSR*QDKGQT
Trigger: AGTTTGTCCCTTGTCCTGCCATCTGCTCGGAGGCTT...GCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCTGAGATGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCCTGACCTCAGAGAGCTaGGGGGTGCCAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGLTSES*GVPAAG
Trigger: TCCTGCAGCTGGCACCCCCCAGCTCTCTGAGGTCAG...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTCCTACAATGAAGATCTaGGAGGCAGGGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPPTMKI*EAGRPS
Trigger: GCTGGGCCTCCCTGCCTCCCAGATCTTCATTGTAGG...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGGGAACCTCTGCCTTCTaGGGGACACCCGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQGTSAF*GTPGTV
Trigger: AACTGTACCGGGTGTCCCTCAGAAGGCAGAGGTTCC...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCACAGAGCTGAAAGTGTaGATGTCGGCCGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACATELKV*MSAALQ
Trigger: CTGCAAGGCGGCCGACATTCACACTTTCAGCTCTGT...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTCTTGAGAGGAAGGCATaGTGCTGGGTGATCGCCTCA +
Preference number: 4 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPLERKA*CWVIAS
Trigger: TGAGGCGATCACCCAGCATCATGCCTTCCTCTCAAG...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTTGTCCGGCCGCCCCGTaGTGTAAAGGATCATGTAGC +
Preference number: 4 (lower is better)
Translates to: QVTMQQVSAWAREQEEACCPAAP*CKGSCS
Trigger: GCTACATGATCCTTTACATCACGGGGCGGCCGGACA...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTTGCTGCTGGCCAGACTaGAGTCCTCTTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: QVTMQQVSAWAREQEEACCCWPD*SPLPPP
Trigger: TGGTGGTGGAAGAGGACTGCAGTCTGGCCAGCAGCA...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGTGGGGTCCAGACCAGTaGTCTCCTTCACACTTGCAC +
Preference number: 4 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPWGPDQ*SPSHLH
Trigger: GTGCAAGTGTGAAGGAGAGCACTGGTCTGGACCCCA...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCCCCAGGTCCTGCCAGTaGCGAACCACATCCACTGCA +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGPRSCQ*RTTSTA
Trigger: TGCAGTGGATGTGGTTCGGCACTGGCAGGACCTGGG...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGAGGAAGATGGCCTTCTaGCTCAGTGGGTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQRKMAF*LSGSCT
Trigger: GGTGCACGACCCACTGAGGCAGAAGGCCATCTTCCT...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCCCTTGCGCAGGATCATaGGCGAGTTGTTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGDFTETTRVSPHLSPESPCAGS*ASCSSW
Trigger: CCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGG...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCCGTGCAGCCCAAAGCTaGCCTTGCGCAGGATCATGC +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGRAAQS*PCAGSC
Trigger: GCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACG...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGGCACCGACATGGTCCTaGGCAGGTGGTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GKDGMKVPVPYELVPKERAPTWS*AGGCAC
Trigger: GCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGC...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCGACTCGGGCTGGCTCTaGGCCCGCTCGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPDSGWL*ARSGLG
Trigger: CCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTC...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCAAGCCTCCGAGCAGATaGCAGGACAAGGGACAAACT +
Preference number: 4 (lower is better)
Translates to: GGDFTETTRVSPHLSPESKPPSR*QDKGQT
Trigger: AGTTTGTCCCTTGTCCTGCCATCTGCTCGGAGGCTT...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CACCCCATCTCAGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCCATAGTCAATCCTCTTaGTTCCCCACCACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HPISAQRAPQCQGKVPPCHSQSS*FPTTWL
Trigger: CAGCCAAGTGGTGGGGAACCAAGAGGATTGACTATG...GCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCTGAGATGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCAACTGGCACTGGGTTTaGTACTTCTTGGTGGACCGG +
Preference number: 4 (lower is better)
Translates to: GGDFTETTRVSPHLSPESNWHWV*YFLVDR
Trigger: CCGGTCCACCAAGAAGTACCAAACCCAGTGCCAGTT...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCCCTTCGCTCAGGAACTaGCACTGGGTTTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: GGDFTETTRVSPHLSPESPSLRN*HWVWYF
Trigger: GAAGTACCAAACCCAGTGCCAGTTCCTGAGCGAAGG...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGCTTGCGCAGAAATTCTaGCTGCGCGTGCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPLAQKF*LRVQPK
Trigger: TTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAG...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGGCTGCTGCACCGACATaGTCCTGCGCAGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GKDGMKVPVPYELVPKERAAAPT*SCAGGC
Trigger: GCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGC...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGTCTCCAGCACAGAGCTaGAAGTGTGAATGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQSPAQS*KCECRP
Trigger: CGGCCGACATTCACACTTTCAGCTCTGTGCTGGAGA...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGACACACCTGCCCATTaGAGCCAATCCCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVTMQQVSAWAREQEEACDTPAH*SQSHQR
Trigger: CCTCTGATGGGATTGGCTTCAATGGGCAGGTGTGTC...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGAGGACCCGTCAATGCTaGACACAACACACTCCATGC +
Preference number: 4 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPRTRQC*TQHTPC
Trigger: GCATGGAGTGTGTTGTGTTCAGCATTGACGGGTCCT...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGAGGGGGCTGTGGGTGTaGAGGGCATCAGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRRGLWV*RASASR
Trigger: CCTGCTCGCTGATGCCCTGCACACCCACAGCCCCCT...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCGCTCTCCTTCACACTTaGACTCTCGTAACGCATCAC +
Preference number: 4 (lower is better)
Translates to: GGDFTETTRVSPHLSPESALLHT*TLVTHH
Trigger: GTGATGCGTTACGAGAGTGCAAGTGTGAAGGAGAGC...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTTGGGGTCCAGACCAGTaGTCTCCTTCACACTTGCAC +
Preference number: 4 (lower is better)
Translates to: QVTMQQVSAWAREQEEACWGPDQ*SPSHLH
Trigger: GTGCAAGTGTGAAGGAGAGCACTGGTCTGGACCCCA...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGCCGAGAAAAAGATCATaGCCTGTGGGAAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGPRKRS*PVGSCA
Trigger: AGCACAACTTCCCACAGGGCATGATCTTTTTCTCGG...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGGCCCAAAGCTGCCCTTaGGCAGGATCATGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: GKDGMKVPVPYELVPKERAQSCP*AGSCAS
Trigger: ACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGC...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACATCCTGCGCAGGTGGTTaGGCTTGCGCAGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTSCAGG*ACAEIL
Trigger: CAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGA...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGTCCTGCGCAGGTGGTTaGGCTTGCGCAGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQSCAGG*ACAEIL
Trigger: CAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGA...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGGCACGTGGTCCTGGCTaGTACCGAGGCAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRARGPG*YRGSPR
Trigger: ACGAGGGCTGCCTCGGTACCAGCCAGGACCACGTGC...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCGTGGCAACAGCGTCCTaGTACTGTGGGGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGVATAS*YCGEEM
Trigger: CATCTCCTCCCCACAGTACCAGGACGCTGTTGCCAC...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCCATCCTTCAGCACACTaGAGTGGATGCTTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GGDFTETTRVSPHLSPESHPSAH*SGCLRG
Trigger: TCCTCTCAAGCATCCACTCCAGTGTGCTGAAGGATG...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCGCACCAGGTGGAACTTaGGCTCCAGCAGTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGAPGGT*APAVAQ
Trigger: TTGAGCCACTGCTGGAGCCCAAGTTCCACCTGGTGC...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCACAGGAGGCACCAGGTaGAACTTGGGCTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGTGGTR*NLGSSS
Trigger: ACTGCTGGAGCCCAAGTTCCACCTGGTGCCTCCTGT...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCGGCAGCGGCCGCTCGTaGTCCTTGTCGGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPGSGRS*SLSDSG
Trigger: GCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCC...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATCTTGCAGGAGCGCTGTaGGCAGCCTTCCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: KAISLCHKTASPKVVPGYLAGAL*AAFLAI
Trigger: GATGGCGAGGAAGGCTGCTCACAGCGCTCCTGCAAG...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGGGAAGTGGGCGCGCATaGCCTTCTCCAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRGSGRA*PSPAQS
Trigger: GCTCTGTGCTGGAGAAGGTCATGCGCGCCCACTTCC...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTTCCCATCAGAGGACTTaGGGAACTCGCCATAGATGT +
Preference number: 4 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPSHQRT*GTRHRC
Trigger: ACATCTATGGCGAGTTCCTCAAGTCCTCTGATGGGA...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTGCCAGGGCTGTCCCCTaGGGGTCCCGCACTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ARFREEDCLQGPQENKDTARAVP*GSRTVA
Trigger: TGCTACAGTGCGGGACCCTCAGGGGACAGCCCTGGC...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCGGGGCACATTGTATGTaGTTCTGCCACTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACAGAHCM*FCHCCW
Trigger: CCAACAACAGTGGCAGAATCACATACAATGTGCCCC...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTCCGATGAGACACACCTaGCCATTGAAGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: QVTMQQVSAWAREQEEACPMRHT*PLKPIP
Trigger: TGGGATTGGCTTCAATGGGCAGGTGTGTCTCATCGG...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCCCCTTCCGGCTGCTaGTGCCAGGGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPSPSGC*CQGCPL
Trigger: CAGGGGACAGCCCTGGCAGCAGCAGCCGGAAGGGGA...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTGCTCCCCTTCCGGCTaGTGCTGCCAGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPCSPSG*CCQGCP
Trigger: GGGACAGCCCTGGCAGCAGCAGCCGGAAGGGGAGCA...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCGCACACTGGAGTGGATaGTTGAGAGGAAGGCATGAT +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACAAHWSG*LRGRHD
Trigger: ATCATGCCTTCCTCTCAAGCATCCACTCCAGTGTGC...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGCCAAAGATCATGCCCTGTaGGAAGTTGTGCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: VTMQQVSAWAREQEEACAKDHAL*EVVLGQ
Trigger: CTGTCCCAGCACAACTTCCCACAGGGCATGATCTTT...GGCACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCGGGGTTGGCGGCCGGTaGGTCCGGCTGCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRAGVGGR*VRLLHR
Trigger: TCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCC...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGGGAAGTGGGCGCGCATaGCCTTCTCCAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALGSGRA*PSPAQS
Trigger: GCTCTGTGCTGGAGAAGGTCATGCGCGCCCACTTCC...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGCCGAGAAAAAGATCATaGCCTGTGGGAAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPPRKRS*PVGSCA
Trigger: AGCACAACTTCCCACAGGGCATGATCTTTTTCTCGG...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATGCCCAAAGCTGCCCTTaGGCAGGATCATGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: KAISLCHKTASPKVVPGYAQSCP*AGSCAS
Trigger: ACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGC...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGCATCCAGCTTCCCTATaGTCTCGATCTGCTCTACCA +
Preference number: 4 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQHPASL*SRSALP
Trigger: TGGTAGAGCAGATCGAGACCATAGGGAAGCTGGATG...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTCATCCAGCTTCCCTATaGTCTCGATCTGCTCTACCA +
Preference number: 4 (lower is better)
Translates to: QVTMQQVSAWAREQEEACHPASL*SRSALP
Trigger: TGGTAGAGCAGATCGAGACCATAGGGAAGCTGGATG...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACATTCAGCACACTGGAGTaGATGCTTGAGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTFSTLE*MLERKA
Trigger: TGCCTTCCTCTCAAGCATCCACTCCAGTGTGCTGAA...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GAACAAACATGCCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCCGCACTGTCCTCCGCATaGCCAGGACCAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EQTCHSDTGTLVKQERVSALSSA*PGPGPV
Trigger: CACTGGGCCTGGTCCTGGCCATGCGGAGGACAGTGC...GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGAGGAATAGGGGGCTGTaGGTGTGCAGGGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRRNRGL*VCRASA
Trigger: CGCTGATGCCCTGCACACCCACAGCCCCCTATTCCT...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACAAAAGATCATGCCCTGTaGGAAGTTGTGCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTKDHAL*EVVLGQ
Trigger: CTGTCCCAGCACAACTTCCCACAGGGCATGATCTTT...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp GAGCTCTGGGAAGGGCAGCCATGCTGTCACCTTTTGTaGGTGGAGGGAAACGGTTTCTGTTTCCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ELWEGQPCCHLL*VEGNGFCFPLW
Trigger: CCACAGAGGGAAACAGAAACCGTTTCCCTCCACCAACAAAAGGTGACAGCATGGCTGCCCTTCCCAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCCTTGCAGGAGCGCTGTaGGCAGCCTTCCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPLAGAL*AAFLAI
Trigger: GATGGCGAGGAAGGCTGCTCACAGCGCTCCTGCAAG...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGTGTCCGGCCGCCCCGTaGTGTAAAGGATCATGTAGC +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRCPAAP*CKGSCS
Trigger: GCTACATGATCCTTTACATCACGGGGCGGCCGGACA...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTGGGCTGGGAACCTCTaGCTTCTGAGGGACACCCGG +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPWAGNL*LLRDTR
Trigger: CCGGGTGTCCCTCAGAAGGCAGAGGTTCCCAGCCCA...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATAGGAAGATGGCCTTCTaGCTCAGTGGGTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: KAISLCHKTASPKVVPGYRKMAF*LSGSCT
Trigger: GGTGCACGACCCACTGAGGCAGAAGGCCATCTTCCT...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGGCAGGTGGTTGCGCTTaGGCAGAAATTCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRAGGCA*AEILAA
Trigger: CGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGC...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCAGGGCAGCAGGGAAGTaGGCGCGCATGACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPRAAGK*ARMTFS
Trigger: GGAGAAGGTCATGCGCGCCCACTTCCCTGCTGCCCT...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGACCACAGGGGTGTCCTaGGTACTGCTGATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALTTGVS*VLLMLP
Trigger: GGGGAGCATCAGCAGTACCCAGGACACCCCTGTGGT...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCCATAGTCAATCCTCTTaGTTCCCCACCACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGHSQSS*FPTTWL
Trigger: CAGCCAAGTGGTGGGGAACCAAGAGGATTGACTATG...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGCACATCCACTGCACCTaGCCGGACCTTGGGGTCACT +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALHIHCT*PDLGVT
Trigger: AGTGACCCCAAGGTCCGGCCAGGTGCAGTGGATGTG...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCCTCAGGAACTGGCACTaGGTTTGGTACTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGLRNWH*VWYFLV
Trigger: CACCAAGAAGTACCAAACCCAGTGCCAGTTCCTGAG...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGCCTTCGCTCAGGAACTaGCACTGGGTTTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: GKDGMKVPVPYELVPKERPSLRN*HWVWYF
Trigger: GAAGTACCAAACCCAGTGCCAGTTCCTGAGCGAAGG...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGGCGAGTTGTTCTTCTTaGGGCGAGAGCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALASCSS*GESGGW
Trigger: CCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGC...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp ACAGAGCTCTGGGAAGGGCAGCCATGCTGTCACCTTTaGTTGGTGGAGGGAAACGGTTTCTGTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TELWEGQPCCHL*LVEGNGFCFPL
Trigger: CAGAGGGAAACAGAAACCGTTTCCCTCCACCAACAAAAGGTGACAGCATGGCTGCCCTTCCCAGAGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGTCTCCACCGAATCACTaGGGACATTCCGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRSPPNH*GHSEGA
Trigger: GGCACCTTCGGAATGTCCTCAGTGATTCGGTGGAGA...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGTGGACCGGCCTACAATaGAGATCTGGGAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALWTGLQ*RSGRQG
Trigger: TCCCTGCCTCCCAGATCTTCATTGTAGGCCGGTCCA...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGGCTTCTCCTGCAGGATaGTGGATGTGCACGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALASPAG*WMCTLW
Trigger: CCACAGCGTGCACATCCAGCATCCTGCAGGAGAAGC...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075258.13
CDS-3UTR CCA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGATCTCGATACTTCCTTaGGCTGGGAACCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GKDGMKVPVPYELVPKERISILP*AGNLCL
Trigger: AAGGCAGAGGTTCCCAGCCCAAGGAAGTATCGAGAT...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCACCACAGGGGTGTCCTaGGTACTGCTGATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPTTGVS*VLLMLP
Trigger: GGGGAGCATCAGCAGTACCCAGGACACCCCTGTGGT...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCCACATCCACTGCACCTaGCCGGACCTTGGGGTCACT +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPHIHCT*PDLGVT
Trigger: AGTGACCCCAAGGTCCGGCCAGGTGCAGTGGATGTG...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAAGCTCGGGCTTGGGGTTaGCGGCCGGTGGGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKARAWG*RPVGPA
Trigger: AGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGC...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGGACACACCTGCCCATTaGAGCCAATCCCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALDTPAH*SQSHQR
Trigger: CCTCTGATGGGATTGGCTTCAATGGGCAGGTGTGTC...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCTGGGCTGGGAACCTCTaGCTTCTGAGGGACACCCGG +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRAWAGNL*LLRDTR
Trigger: CCGGGTGTCCCTCAGAAGGCAGAGGTTCCCAGCCCA...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp ATGAACCTCCACAACCCAAAATCTCAGCTCTGTGCAATCCAGAAACATAAAGGGCCGAACCACATCCACTaGACCTGGCCGGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: MNLHNPKSQLCAIQKHKGPNHIH*TWPDLG
Trigger: CCCAAGGTCCGGCCAGGTGCAGTGGATGTGGTTCGG...CCCTTTATGTTTCTGGATTGCACAGAGCTGAGATTTTGGGTTGTGGAGGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCGCACCGACATGGTCCTaGGCAGGTGGTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRAAPTWS*AGGCAC
Trigger: GCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGC...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATGCTCTACCAGGTCATTaGAGCTCCACTGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: KAISLCHKTASPKVVPGYALPGH*SSTGSF
Trigger: GAATGAGCCAGTGGAGCTCCAATGACCTGGTAGAGC...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGGCTCTACCAGGTCATTaGAGCTCCACTGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRALPGH*SSTGSF
Trigger: GAATGAGCCAGTGGAGCTCCAATGACCTGGTAGAGC...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTGTGGCAACAGCGTCCTaGTACTGTGGGGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: ARFREEDCLQGPQENKDTVATAS*YCGEEM
Trigger: CATCTCCTCCCCACAGTACCAGGACGCTGTTGCCAC...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCGCACCAGGTGGAACTTaGGCTCCAGCAGTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPAPGGT*APAVAQ
Trigger: TTGAGCCACTGCTGGAGCCCAAGTTCCACCTGGTGC...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GAACAAACATGCCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCCCTTGAGAGGAAGGCATaGTGCTGGGTGATCGCCTCA +
Preference number: 4 (lower is better)
Translates to: EQTCHSDTGTLVKQERVSLERKA*CWVIAS
Trigger: TGAGGCGATCACCCAGCATCATGCCTTCCTCTCAAG...GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCCCCTGTGGGAAGTTGTaGTGGGACAGCCACGACACC +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRAPCGKL*WDSHDT
Trigger: GGTGTCGTGGCTGTCCCAGCACAACTTCCCACAGGG...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCTGCCGCCAGGTGTGCTaGGTAGCCTTCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRACRQVC*VAFAQE
Trigger: TTCCTGAGCGAAGGCTACGCAGCACACCTGGCGGCA...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAAGCAGCCAGGGGCACGTaGTCCTGGCTGGTACCGAGG +
Preference number: 4 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKAARGT*SWLVPR
Trigger: CCTCGGTACCAGCCAGGACCACGTGCCCCTGGCTGC...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp ATGAACCTCCACAACCCAAAATCTCAGCTCTGTGCAATCCAGAAACATAAAGGGGAGGCAACGGCCTCTTaGGGTCCTCATCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: MNLHNPKSQLCAIQKHKGEATAS*GPHPPL
Trigger: GAGTGGAGGATGAGGACCCCAAGAGGCCGTTGCCTC...CCCTTTATGTTTCTGGATTGCACAGAGCTGAGATTTTGGGTTGTGGAGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGCATCCTTCAGCACACTaGAGTGGATGCTTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRHPSAH*SGCLRG
Trigger: TCCTCTCAAGCATCCACTCCAGTGTGCTGAAGGATG...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp GAACAAACATGCCACTCAGATACGGGAACTTTGGTCAAGCAGGAACGTGTTTCCCTTGCGCAGAAATTCTaGCTGCGCGTGCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: EQTCHSDTGTLVKQERVSLAQKF*LRVQPK
Trigger: TTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAG...GGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp AAGACAAACAGTCAGCACCAGGCCCAGTCCCCAGGATaGTGGACAAACTCCACATACATAGATTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: KTNSQHQAQSPG*WTNSTYIDWTQ
Trigger: CTGGGTCCAATCTATGTATGTGGAGTTTGTCCACAATCCTGGGGACTGGGCCTGGTGCTGACTGTTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp CGGGAAGAACAAACATGCCACTCAGATACGGGAACTTaGGTCAAGCAGGAACGTGTTTCCAGCAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: REEQTCHSDTGT*VKQERVSSSWR
Trigger: TCTCCAGCTGCTGGAAACACGTTCCTGCTTGACCAAAGTTCCCGTATCTGAGTGGCATGTTTGTTCTTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp TGGAATGGAACCCTGGGAATTCCACTGGAAAGTTGGTaGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAG +
Preference number: 4 (lower is better)
Translates to: WNGTLGIPLESW*FKAGSTATLLQ
Trigger: CTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAACCAACTTTCCAGTGGAATTCCCAGGGTTCCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCAAAGAATTCATCATCTaGACTCTCCACCGAATCACT +
Preference number: 4 (lower is better)
Translates to: RILGLRYICGSPAPRQEGKEFII*TLHRIT
Trigger: AGTGATTCGGTGGAGAGTTCAGATGATGAATTCTTT...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTACTGGAGTGGATGCTTaGGAGGAAGGCATGATGCTG +
Preference number: 4 (lower is better)
Translates to: ARFREEDCLQGPQENKDTTGVDA*EEGMML
Trigger: CAGCATCATGCCTTCCTCTCAAGCATCCACTCCAGT...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTAGGACCCGTCAATGCTaGACACAACACACTCCATGC +
Preference number: 4 (lower is better)
Translates to: ARFREEDCLQGPQENKDTRTRQC*TQHTPC
Trigger: GCATGGAGTGTGTTGTGTTCAGCATTGACGGGTCCT...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTCCGATGAGACACACCTaGCCATTGAAGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: ARFREEDCLQGPQENKDTPMRHT*PLKPIP
Trigger: TGGGATTGGCTTCAATGGGCAGGTGTGTCTCATCGG...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp ATGAACCTCCACAACCCAAAATCTCAGCTCTGTGCAATCCAGAAACATAAAGGGAATTCTGGCTGCGCGTaGAGCCCAAAGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: MNLHNPKSQLCAIQKHKGNSGCA*SPKLPL
Trigger: CAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAATT...CCCTTTATGTTTCTGGATTGCACAGAGCTGAGATTTTGGGTTGTGGAGGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCCGCAGAAATTCTGGCTaGGCGTGCAGCCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRARRNSG*ACSPKL
Trigger: CAGCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCG...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCACAGGAGGCACCAGGTaGAACTTGGGCTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRATGGTR*NLGSSS
Trigger: ACTGCTGGAGCCCAAGTTCCACCTGGTGCCTCCTGT...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCACAGAGCTGAAAGTGTaGATGTCGGCCGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRATELKV*MSAALQ
Trigger: CTGCAAGGCGGCCGACATTCACACTTTCAGCTCTGT...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAATGTCCTGGGTACTGCTaGTGCTCCCCTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKCPGYC*CSPSGC
Trigger: GCAGCCGGAAGGGGAGCATCAGCAGTACCCAGGACA...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCGCACACTGGAGTGGATaGTTGAGAGGAAGGCATGAT +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPAHWSG*LRGRHD
Trigger: ATCATGCCTTCCTCTCAAGCATCCACTCCAGTGTGC...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTGCTCTCCTTCACACTTaGACTCTCGTAACGCATCAC +
Preference number: 4 (lower is better)
Translates to: ARFREEDCLQGPQENKDTALLHT*TLVTHH
Trigger: GTGATGCGTTACGAGAGTGCAAGTGTGAAGGAGAGC...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp ATGAACCTCCACAACCCAAAATCTCAGCTCTGTGCAATCCAGAAACATAAAGGGGGTTGCGAAGGAAGATaGCCTTCTGCCTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MNLHNPKSQLCAIQKHKGGCEGR*PSASVG
Trigger: ACCCACTGAGGCAGAAGGCCATCTTCCTTCGCAACC...CCCTTTATGTTTCTGGATTGCACAGAGCTGAGATTTTGGGTTGTGGAGGTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp GTCCCCAGGATTGTGGACAAACTCCACATACATAGATaGGACCCAGGGGATATCTTCTCCCATAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: VPRIVDKLHIHR*DPGDIFSHKAI
Trigger: GATCGCTTTATGGGAGAAGATATCCCCTGGGTCCAATCTATGTATGTGGAGTTTGTCCACAATCCTGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCGATACTTCCTTGGGCTaGGAACCTCTGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRADTSLG*EPLPSE
Trigger: CTCAGAAGGCAGAGGTTCCCAGCCCAAGGAAGTATC...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAAGCGAGTTGTTCTTCTTaGGGCGAGAGCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKASCSS*GESGGW
Trigger: CCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGC...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp ATGAACCTCCACAACCCAAAATCTCAGCTCTGTGCAATCCAGAAACATAAAGGGTCCCATCAGAGGACTTaGGGAACTCGCCATAGATGT +
Preference number: 4 (lower is better)
Translates to: MNLHNPKSQLCAIQKHKGSHQRT*GTRHRC
Trigger: ACATCTATGGCGAGTTCCTCAAGTCCTCTGATGGGA...CCCTTTATGTTTCTGGATTGCACAGAGCTGAGATTTTGGGTTGTGGAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAAGCTGTCCGAGGACTCTaGACTGTCGCTATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKAVRGL*TVAMGA
Trigger: AGCTCCCATAGCGACAGTTCAGAGTCCTCGGACAGC...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR GCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAAGCAGGTGGTTGCGCTTaGGCAGAAATTCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKAGGCA*AEILAA
Trigger: CGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGC...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCTTCAGCACACTGGAGTaGATGCTTGAGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FLPNLPISFPTRSELNRAFSTLE*MLERKA
Trigger: TGCCTTCCTCTCAAGCATCCACTCCAGTGTGCTGAA...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
3UTR CAA 72 bp ACTGAGTGGCCAGGGAGAGGAAGAGAATACAATGGTTaGAGCCAATATTCCATGAACCTCCACAACCCAAAA +
Preference number: 4 (lower is better)
Translates to: TEWPGRGREYNG*SQYSMNLHNPK
Trigger: TTTTGGGTTGTGGAGGTTCATGGAATATTGGCTCAAACCATTGTATTCTCTTCCTCTCCCTGGCCACTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR TCA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCAAAGAATTCATCATCTaGACTCTCCACCGAATCACT +
Preference number: 4 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPKEFII*TLHRIT
Trigger: AGTGATTCGGTGGAGAGTTCAGATGATGAATTCTTT...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CCA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAACTCAGGAACTGGCACTaGGTTTGGTACTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKLRNWH*VWYFLV
Trigger: CACCAAGAAGTACCAAACCCAGTGCCAGTTCCTGAG...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp GCGGGCAGCGGCCGCTCGTGGTCCTTGTCGGACTCGGGCTGGCTCTaGGCCCGCTCGGGCTTGGGGTTGGCGGCCGGTGGGTCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: AGSGRSWSLSDSGWL*ARSGLGLAAGGSGC
Trigger: GCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp CTGAGAGCGGGCAGCGGCCGCTCGTGGTCCTTGTCGGACTCGGGCTaGCTCTGCGCCCGCTCGGGCTTGGGGTTGGCGGCCGGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LRAGSGRSWSLSDSG*LCARSGLGLAAGGS
Trigger: GGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCCCGCTCTCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp CTCGGGCTGGCTCTGCGCCCGCTCGGGCTTGGGGTTGGCGGCCGGTaGGTCCGGCTGCTGCACCGACATGGTCCTGCGCAGGTGGTTGCG +
Preference number: 5 (lower is better)
Translates to: LGLALRPLGLGVGGR*VRLLHRHGPAQVVA
Trigger: CGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp TTAGGGGGCCCACGCGCCCAGCTGAGAGCGGGCAGCGGCCGCTCGTaGTCCTTGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LGGPRAQLRAGSGRS*SLSDSGWLCARSGL
Trigger: CAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCCCGCTCTCAGCTGGGCGCGTGGGCCCCCTAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp CCTTGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTTGGGGTTaGCGGCCGGTGGGTCCGGCTGCTGCACCGACATGGTCCTGCGCA +
Preference number: 5 (lower is better)
Translates to: PCRTRAGSAPARAWG*RPVGPAAAPTWSCA
Trigger: TGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp CGTGGTCCTTGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTTaGGGTTGGCGGCCGGTGGGTCCGGCTGCTGCACCGACATGGTCC +
Preference number: 5 (lower is better)
Translates to: RGPCRTRAGSAPARA*GWRPVGPAAAPTWS
Trigger: GGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp TGCGCCCGCTCGGGCTTGGGGTTGGCGGCCGGTGGGTCCGGCTGCTaGACCGACATGGTCCTGCGCAGGTGGTTGCGCTTGCGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: CARSGLGLAAGGSGC*TDMVLRRWLRLRRN
Trigger: ATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp CGGGCTTGGGGTTGGCGGCCGGTGGGTCCGGCTGCTGCACCGACATaGTCCTGCGCAGGTGGTTGCGCTTGCGCAGAAATTCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: RAWGWRPVGPAAAPT*SCAGGCACAEILAA
Trigger: CGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GAGTGGGTACTGGGAGCCGGCACCCCACCCCTCCAGCCTCAGGGAGGCACCCGGCGCAGGTGGTTGCGCTaGCGCAGAAATTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: EWVLGAGTPPLQPQGGTRRRWLR*RRNSGC
Trigger: GCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCG...CCGGGTGCCTCCCTGAGGCTGGAGGGGTGGGGTGCCGGCTCCCAGTACCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp TGGGGTTGGCGGCCGGTGGGTCCGGCTGCTGCACCGACATGGTCCTaGGCAGGTGGTTGCGCTTGCGCAGAAATTCTGGCTGCGCGTGCA +
Preference number: 5 (lower is better)
Translates to: WGWRPVGPAAAPTWS*AGGCACAEILAARA
Trigger: TGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp GCGGCCGGTGGGTCCGGCTGCTGCACCGACATGGTCCTGCGCAGGTaGTTGCGCTTGCGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: AAGGSGCCTDMVLRR*LRLRRNSGCACSPK
Trigger: CTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp CCGGTGGGTCCGGCTGCTGCACCGACATGGTCCTGCGCAGGTGGTTaGGCTTGCGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PVGPAAAPTWSCAGG*ACAEILAARAAQSC
Trigger: GCAGCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCGGCCGCTCGTGGTCCTaGTCGGACTCGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GGDFTETTRVSPHLSPESGRSWS*SDSGWL
Trigger: GAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCC...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp TCATCATCTGAACTCTCCACCGAATCACTGAGGACATTCCGAAGGTaGCAGGGGGCACCGCCACCCGGGGAAGGGCCACCTGCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SSSELSTESLRTFRR*QGAPPPGEGPPALP
Trigger: GGGCAGCGCAGGTGGCCCTTCCCCGGGTGGCGGTGCCCCCTGGCACCTTCGGAATGTCCTCAGTGATTCGGTGGAGAGTTCAGATGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCCGGGGCCGGGGCACATaGTATGTGATTCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: PSSLREAPGLLGNSQHGARGRGT*YVILPL
Trigger: CAGTGGCAGAATCACATACAATGTGCCCCGGCCCCG...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTGGCCGCTCGTGGTCCTaGTCGGACTCGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QVTMQQVSAWAREQEEACGRSWS*SDSGWL
Trigger: GAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCC...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp GCCCAAAGCTGCCCTTGCGCAGGATCATGCGCGAGTTGTTCTTCTTaGGGCGAGAGCGGTGGCTGGCTTCTAGTGCCGCCAGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AQSCPCAGSCASCSS*GESGGWLLVPPGVL
Trigger: CAGCACACCTGGCGGCACTAGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GTGCCTGCAGTGTACACAGGTACTTGGCCCTGGCCTCAGTGGCAGCCCAGAGGGCTCTTACTGAGCCGCTaGCTGCTGGCCAGACTGCAG +
Preference number: 5 (lower is better)
Translates to: VPAVYTGTWPWPQWQPRGLLLSR*LLARLQ
Trigger: CTGCAGTCTGGCCAGCAGCAAGCGGCTCAGTAAGAG...CCCTCTGGGCTGCCACTGAGGCCAGGGCCAAGTACCTGTGTACACTGCAGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp CACCCCATCTCAGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCTTGGTTCCCCACCACTaGGCTGTGATGCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: HPISAQRAPQCQGKVPPCLVPHH*AVMREA
Trigger: TGCCTCCCGCATCACAGCCAAGTGGTGGGGAACCAA...GCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCTGAGATGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 90 bp GGGAAGTGGGCGCGCATGACCTTCTCCAGCACAGAGCTGAAAGTGTaGATGTCGGCCGCCTTGCAGGAAGGGTCACCAGAGCCGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GKWARMTFSSTELKV*MSAALQEGSPEPVS
Trigger: GGACACCGGCTCTGGTGACCCTTCCTGCAAGGCGGCCGACATTCACACTTTCAGCTCTGTGCTGGAGAAGGTCATGCGCGCCCACTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp TTGCAGGAAGGGTCACCAGAGCCGGTGTCCAGGACGTTGCCCCCATaGAGCACCAGCAGAAGGACGTGTGTCTTGCAGGAGCGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LQEGSPEPVSRTLPP*STSRRTCVLQERCE
Trigger: CTCACAGCGCTCCTGCAAGACACACGTCCTTCTGCTGGTGCTGCATGGGGGCAACGTCCTGGACACCGGCTCTGGTGACCCTTCCTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp GCAGGATCATGCGCGAGTTGTTCTTCTTGGGGCGAGAGCGGTGGCTaGCTTCTAGTGCCGCCAGGTGTGCTGCGTAGCCTTCGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AGSCASCSSWGESGG*LLVPPGVLRSLRSG
Trigger: TCCTGAGCGAAGGCTACGCAGCACACCTGGCGGCACTAGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCCGGGGCCGGGGCACATaGTATGTGATTCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: GGDFTETTRVSPHLSPESRGRGT*YVILPL
Trigger: CAGTGGCAGAATCACATACAATGTGCCCCGGCCCCG...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGAGCCCAAAGCTGCCCTaGCGCAGGATCATGCGCGAG +
Preference number: 5 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPSPKLP*RRIMRE
Trigger: CTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCT...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCCGCAGGTGGTTGCGCTaGCGCAGAAATTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GGDFTETTRVSPHLSPESRRWLR*RRNSGC
Trigger: GCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCG...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp ATTCTGGCTGCGCGTGCAGCCCAAAGCTGCCCTTGCGCAGGATCATaGGCGAGTTGTTCTTCTTGGGGCGAGAGCGGTGGCTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: ILAARAAQSCPCAGS*ASCSSWGESGGWLL
Trigger: TAGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp GGTTGCGCTTGCGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAGCTaGCCTTGCGCAGGATCATGCGCGAGTTGTTCTTCTTGGGGCGAG +
Preference number: 5 (lower is better)
Translates to: GCACAEILAARAAQS*PCAGSCASCSSWGE
Trigger: CTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp CCCTCCAGCCTCAGGGAGGCACCCGGGTTGCTGGGCAACTCACAACATGGTGCCTGCTCTACCAGGTCATaGGAGCTCCACTGGCTCATT +
Preference number: 5 (lower is better)
Translates to: PSSLREAPGLLGNSQHGACSTRS*ELHWLI
Trigger: AATGAGCCAGTGGAGCTCCAATGACCTGGTAGAGCA...GGCACCATGTTGTGAGTTGCCCAGCAACCCGGGTGCCTCCCTGAGGCTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGAAAACGCCTGTGTCAGGGAGAAGGCAACCCTTCCCATCCCTTCAGGCCGCCTCTCTTACTGAGCCGCTaGCTGCTGGCCAGACTGCAG +
Preference number: 5 (lower is better)
Translates to: GKRLCQGEGNPSHPFRPPLLLSR*LLARLQ
Trigger: CTGCAGTCTGGCCAGCAGCAAGCGGCTCAGTAAGAG...AGGCGGCCTGAAGGGATGGGAAGGGTTGCCTTCTCCCTGACACAGGCGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp ACAGTTCTCGCTGCTTCTCCTGCAGGATGCTGGATGTGCACGCTGTaGCCCCGTCTCCCTGACGCTCATCCAGCTTCCCTATGGTCTCGA +
Preference number: 5 (lower is better)
Translates to: TVLAASPAGCWMCTL*PRLPDAHPASLWSR
Trigger: TCGAGACCATAGGGAAGCTGGATGAGCGTCAGGGAGACGGGGCCACAGCGTGCACATCCAGCATCCTGCAGGAGAAGCAGCGAGAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075258.13
CDS-3UTR CAA 90 bp CACCCCATCTCAGCCCAGAGAGCTCCCCAATGTCAGGGCAAGGTCCCTCCCTGCAGACACACCTGCCCATaGAAGCCAATCCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: HPISAQRAPQCQGKVPPCRHTCP*KPIPSE
Trigger: CTCTGATGGGATTGGCTTCAATGGGCAGGTGTGTCT...GCAGGGAGGGACCTTGCCCTGACATTGGGGAGCTCTCTGGGCTGAGATGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGGCACCTGGCCGGACCTaGGGGTCACTTCCCATGATA +
Preference number: 5 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQAPGRT*GSLPMI
Trigger: TATCATGGGAAGTGACCCCAAGGTCCGGCCAGGTGC...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp TTGTTTAAGGCGGGGTCAACTGCAACGCTCCTACAGTCAGGGTGCCCCTCCCAGATGCCCTGTGGGAAGTaGTGCTGGGACAGCCACGAC +
Preference number: 5 (lower is better)
Translates to: LFKAGSTATLLQSGCPSQMPCGK*CWDSHD
Trigger: GTCGTGGCTGTCCCAGCACAACTTCCCACAGGGCAT...CTGGGAGGGGCACCCTGACTGTAGGAGCGTTGCAGTTGACCCCGCCTTAAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGCGGCGACTTCACTGAGACAACCCGGGTTTCACCCCATCTCAGCCCAGAGAGCGAACTGGCACTGGGTTaGGTACTTCTTGGTGGACCG +
Preference number: 5 (lower is better)
Translates to: GGDFTETTRVSPHLSPESELALG*VLLGGP
Trigger: CGGTCCACCAAGAAGTACCAAACCCAGTGCCAGTTC...GCTCTCTGGGCTGAGATGGGGTGAAACCCGGGTTGTCTCAGTGAAGTCGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp AGAATCCTGGGGCTCAGATACATATGTGGTAGCCCAGCACCCAGGCAGGAAGGCCGCGAGTTGTTCTTCTaGGGGCGAGAGCGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RILGLRYICGSPAPRQEGRELFF*GRERWL
Trigger: CAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCG...GCCTTCCTGCCTGGGTGCTGGGCTACCACATATGTATCTGAGCCCCAGGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGGTCCTGCGCAGGTGGTaGCGCTTGCGCAGAAATTCT +
Preference number: 5 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPVLRRW*RLRRNS
Trigger: AGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGAC...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 90 bp AGGAGGCACCAGGTGGAACTTGGGCTCCAGCAGTGGCTCAAGCCGTaGAGCAGAGGGATCTGCACAGTGGAAGAAGCTGTAGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: RRHQVELGLQQWLKP*SRGICTVEEAVDLA
Trigger: AGCCAGGTCTACAGCTTCTTCCACTGTGCAGATCCCTCTGCTTCACGGCTTGAGCCACTGCTGGAGCCCAAGTTCCACCTGGTGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp TCAGACACATCAAAGTCAAAGCGACCCAGGCTGACCTCAGAGAGCTaGGGGGTGCCAGCTGCAGGAGCCTCAGCCTCATCCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: SDTSKSKRPRLTSES*GVPAAGASASSFST
Trigger: TGTGCTGAAGGATGAGGCTGAGGCTCCTGCAGCTGGCACCCCCCAGCTCTCTGAGGTCAGCCTGGGTCGCTTTGACTTTGATGTGTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGAGCCCAAAGCTGCCCTaGCGCAGGATCATGCGCGAG +
Preference number: 5 (lower is better)
Translates to: GKDGMKVPVPYELVPKERSPKLP*RRIMRE
Trigger: CTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCT...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 90 bp GGTCCTCATCCTCCACTCCACTGGAGACATCGACATTGCTCTTACTaGGCCGCTTGCTGCTGGCCAGACTGCAGTCCTCTTCCACCACCA +
Preference number: 5 (lower is better)
Translates to: GPHPPLHWRHRHCSY*AACCWPDCSPLPPP
Trigger: TGGTGGTGGAAGAGGACTGCAGTCTGGCCAGCAGCAAGCGGCTCAGTAAGAGCAATGTCGATGTCTCCAGTGGAGTGGAGGATGAGGACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 90 bp GCCACTGTTGTTGGTGATTTCTGTGTCCAGGTGGACCCAGCGGCCTaGCGACGGCTCTGTCATCACCAGGATGTCCACCTTCTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: ATVVGDFCVQVDPAA*RRLCHHQDVHLLSS
Trigger: ACTGGAGAGAAGGTGGACATCCTGGTGATGACAGAGCCGTCGTCAGGCCGCTGGGTCCACCTGGACACAGAAATCACCAACAACAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp GCACCCATAGGCGCCAGGCTGTCCGAGGACTCTGAACTGTCGCTATaGGAGCTGCCTTTACTTAGCCTCCGTTCTGTGCGCTGGAATCTT +
Preference number: 5 (lower is better)
Translates to: APIGARLSEDSELSL*ELPLLSLRSVRWNL
Trigger: AAGATTCCAGCGCACAGAACGGAGGCTAAGTAAAGGCAGCTCCCATAGCGACAGTTCAGAGTCCTCGGACAGCCTGGCGCCTATGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp ACATCATTGGCACGGTGGTTCGCAGTAACGTTCCGCAACTTGACCTaGGTTCGCTTACGCAGCCACTTCTCACGGGGGTTAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: TSLARWFAVTFRNLT*VRLRSHFSRGLAGL
Trigger: GAGCCCTGCTAACCCCCGTGAGAAGTGGCTGCGTAAGCGAACCCAGGTCAAGTTGCGGAACGTTACTGCGAACCACCGTGCCAATGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGAGGGTCACAGGAATACTGGAGGAGGCACCAGCACACCTCCTGGAGAACACCGGGACAAGGGACAAACTaGATGAGGATGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GGSQEYWRRHQHTSWRTPGQGTN*MRMCPR
Trigger: CCTGGGACACATCCTCATCAAGTTTGTCCCTTGTCC...CGGTGTTCTCCAGGAGGTGTGCTGGTGCCTCCTCCAGTATTCCTGTGACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACACACTCCTGCATGAGGTaGCGAAGGAAGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTHSCMR*RRKMAF
Trigger: GAAGGCCATCTTCCTTCGCAACCTCATGCAGGAGTG...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACAAGGATCATGCGCGAGTaGTTCTTCTTGGGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTRIMRE*FFLGRE
Trigger: CTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCT...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp GCAGCCTTCCTCGCCATCTTCATGAATCTCGATACTTCCTTGGGCTaGGAACCTCTGCCTTCTGAGGGACACCCGGTACAGTTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: AAFLAIFMNLDTSLG*EPLPSEGHPVQFSL
Trigger: CAGCGAGAACTGTACCGGGTGTCCCTCAGAAGGCAGAGGTTCCCAGCCCAAGGAAGTATCGAGATTCATGAAGATGGCGAGGAAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075258.13
CDS CCA 90 bp ACACTCCTGCATGAGGTTGCGAAGGAAGATGGCCTTCTGCCTCAGTaGGTCGTGCACCAGTCCGTCCGAGAAAAAGATCATGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: TLLHEVAKEDGLLPQ*VVHQSVREKDHALW
Trigger: CCACAGGGCATGATCTTTTTCTCGGACGGACTGGTGCACGACCCACTGAGGCAGAAGGCCATCTTCCTTCGCAACCTCATGCAGGAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp GCAGCCTTCCTCGCCATCTTCATGAATCTCGATACTTCCTTGGGCTaGGAACCTCTGCCTTCTGAGGGACACCCGGTACAGTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: AAFLAIFMNLDTSLG*EPLPSEGHPVQFSL
Trigger: CAGGGAGAACTGTACCGGGTGTCCCTCAGAAGGCAGAGGTTCCCAGCCCAAGGAAGTATCGAGATTCATGAAGATGGCGAGGAAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp TACAGACTCCAGGGCACACAGCCAGACCAAGTGGGAGGAGTCCACAGCTGCACAGGACAAGGGACAAACTaGATGAGGATGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: YRLQGTQPDQVGGVHSCTGQGTN*MRMCPR
Trigger: CCTGGGACACATCCTCATCAAGTTTGTCCCTTGTCC...TGTGCAGCTGTGGACTCCTCCCACTTGGTCTGGCTGTGTGCCCTGGAGTCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp CACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCTCAGCCAGGGCAGGCGAGGCAACGGCCTCTaGGGGTCCTCATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: HNRTRDKGNYQASLSQGRRGNGL*GSSSST
Trigger: AGTGGAGGATGAGGACCCCAAGAGGCCGTTGCCTCG...CCTGCCCTGGCTGAGGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp CAGGTGACCATGCAACAGGTATCAGCCTGGGCCAGAGAGCAAGAGGAGGCCTGTTGGGTTTGGTACTTCTaGGTGGACCGGCCTACAATG +
Preference number: 5 (lower is better)
Translates to: QVTMQQVSAWAREQEEACWVWYF*VDRPTM
Trigger: CATTGTAGGCCGGTCCACCAAGAAGTACCAAACCCA...ACAGGCCTCCTCTTGCTCTCTGGCCCAGGCTGATACCTGTTGCATGGTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 90 bp TGCATGAGGTTGCGAAGGAAGATGGCCTTCTGCCTCAGTGGGTCGTaGACCAGTCCGTCCGAGAAAAAGATCATGCCCTGTGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: CMRLRRKMAFCLSGS*TSPSEKKIMPCGKL
Trigger: CAACTTCCCACAGGGCATGATCTTTTTCTCGGACGGACTGGTGCACGACCCACTGAGGCAGAAGGCCATCTTCCTTCGCAACCTCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATATGCCCTGTGGGAAGTaGTGCTGGGACAGCCACGAC +
Preference number: 5 (lower is better)
Translates to: KAISLCHKTASPKVVPGYMPCGK*CWDSHD
Trigger: GTCGTGGCTGTCCCAGCACAACTTCCCACAGGGCAT...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GGAAAGGACGGGATGAAGGTGCCTGTGCCATATGAGCTGGTGCCAAAAGAGAGGCACTCCTGCATGAGGTaGCGAAGGAAGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GKDGMKVPVPYELVPKERHSCMR*RRKMAF
Trigger: GAAGGCCATCTTCCTTCGCAACCTCATGCAGGAGTG...CCTCTCTTTTGGCACCAGCTCATATGGCACAGGCACCTTCATCCCGTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 90 bp AGTCATATGTGGAGGAGTCACTCTGTTTCCGAGGCAACGGCCTCTTaGGGTCCTCATCCTCCACTCCACTGGAGACATCGACATTGCTCT +
Preference number: 5 (lower is better)
Translates to: SHMWRSHSVSEATAS*GPHPPLHWRHRHCS
Trigger: AGAGCAATGTCGATGTCTCCAGTGGAGTGGAGGATGAGGACCCCAAGAGGCCGTTGCCTCGGAAACAGAGTGACTCCTCCACATATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GTCTTCTATAGGTGCCATGTTTTGTCTGCAGGACACTTCTGGGGCATAGCTCTGTTGGTTCCCCACCACTaGGCTGTGATGCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: VFYRCHVLSAGHFWGIALLVPHH*AVMREA
Trigger: TGCCTCCCGCATCACAGCCAAGTGGTGGGGAACCAA...CAGAGCTATGCCCCAGAAGTGTCCTGCAGACAAAACATGGCACCTATAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTCGCGAGTTGTTCTTCTaGGGGCGAGAGCGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ARFREEDCLQGPQENKDTRELFF*GRERWL
Trigger: CAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCG...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 90 bp TCAGCACACTGGAGTGGATGCTTGAGAGGAAGGCATGATGCTGGGTaGTCGCCTCACAGTCATATGTGGAGGAGTCACTCTGTTTCCGAG +
Preference number: 5 (lower is better)
Translates to: SAHWSGCLRGRHDAG*SPHSHMWRSHSVSE
Trigger: CTCGGAAACAGAGTGACTCCTCCACATATGACTGTGAGGCGATCACCCAGCATCATGCCTTCCTCTCAAGCATCCACTCCAGTGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp GCAAGATTCAGGGAAGAGGACTGTCTTCAAGGGCCACAGGAGAATAAGGATACTGCACCTGGCCGGACCTaGGGGTCACTTCCCATGATA +
Preference number: 5 (lower is better)
Translates to: ARFREEDCLQGPQENKDTAPGRT*GSLPMI
Trigger: TATCATGGGAAGTGACCCCAAGGTCCGGCCAGGTGC...AGTATCCTTATTCTCCTGTGGCCCTTGAAGACAGTCCTCTTCCCTGAATCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATGAACTGGCACTGGGTTaGGTACTTCTTGGTGGACCG +
Preference number: 5 (lower is better)
Translates to: KAISLCHKTASPKVVPGYELALG*VLLGGP
Trigger: CGGTCCACCAAGAAGTACCAAACCCAGTGCCAGTTC...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp AAAGCGATCTCTCTGTGTCATAAGACAGCCAGCCCCAAAGTGGTGCCCGGATATTGCTCTACCAGGTCATaGGAGCTCCACTGGCTCATT +
Preference number: 5 (lower is better)
Translates to: KAISLCHKTASPKVVPGYCSTRS*ELHWLI
Trigger: AATGAGCCAGTGGAGCTCCAATGACCTGGTAGAGCA...ATATCCGGGCACCACTTTGGGGCTGGCTGTCTTATGACACAGAGAGATCGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp AGACTCCAGCAACCCACAACAGGACAAGGGATAAAGGAAATTATCAGGCATCCCGTCCTGCGCAGGTGGTaGCGCTTGCGCAGAAATTCT +
Preference number: 5 (lower is better)
Translates to: RLQQPTTGQGIKEIIRHPVLRRW*RLRRNS
Trigger: AGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGAC...GGGATGCCTGATAATTTCCTTTATCCCTTGTCCTGTTGTGGGTTGCTGGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp TTTCTTCCTAACCTTCCTATTAGTTTCCCAACAAGATCAGAACTCAACCGGGCCAGGATCATGCGCGAGTaGTTCTTCTTGGGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: FLPNLPISFPTRSELNRARIMRE*FFLGRE
Trigger: CTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCT...GGCCCGGTTGAGTTCTGATCTTGTTGGGAAACTAATAGGAAGGTTAGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS-3UTR CAA 90 bp AAACGTTTAACTTGGGTGTATAAGAAATTCCTCCCAAGCCCAGAAGGAAAGAAATGGGTTTGGTACTTCTaGGTGGACCGGCCTACAATG +
Preference number: 5 (lower is better)
Translates to: KRLTWVYKKFLPSPEGKKWVWYF*VDRPTM
Trigger: CATTGTAGGCCGGTCCACCAAGAAGTACCAAACCCA...TTTCTTTCCTTCTGGGCTTGGGAGGAATTTCTTATACACCCAAGTTAAACGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp GGCCCACGCGCCCAGCTGAGAGCGGGCAGCGGCCGCTCGTGGTCCTaGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: GPRAQLRAGSGRSWS*SDSGWLCARSGLGL
Trigger: CAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCCCGCTCTCAGCTGGGCGCGTGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp GGCCGCTCGTGGTCCTTGTCGGACTCGGGCTGGCTCTaGGCCCGCTCGGGCTTGGGGTTGGCGGCCGGTGGG +
Preference number: 6 (lower is better)
Translates to: GRSWSLSDSGWL*ARSGLGLAAGG
Trigger: CCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp TGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTTaGGGTTGGCGGCCGGTGGGTCCGGCTGCTGCACCG +
Preference number: 6 (lower is better)
Translates to: CRTRAGSAPARA*GWRPVGPAAAP
Trigger: CGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GGCAGCGGCCGCTCGTGGTCCTTGTCGGACTCGGGCTaGCTCTGCGCCCGCTCGGGCTTGGGGTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: GSGRSWSLSDSG*LCARSGLGLAA
Trigger: GGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp CCACGCGCCCAGCTGAGAGCGGGCAGCGGCCGCTCGTaGTCCTTGTCGGACTCGGGCTGGCTCTGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: PRAQLRAGSGRS*SLSDSGWLCAR
Trigger: GCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCCCGCTCTCAGCTGGGCGCGTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp GCCCAGCTGAGAGCGGGCAGCGGCCGCTCGTGGTCCTaGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: AQLRAGSGRSWS*SDSGWLCARSG
Trigger: GCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGAGCGGCCGCTGCCCGCTCTCAGCTGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GCTCTGCGCCCGCTCGGGCTTGGGGTTGGCGGCCGGTaGGTCCGGCTGCTGCACCGACATGGTCCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: ALRPLGLGVGGR*VRLLHRHGPAQ
Trigger: CTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp ACTCGGGCTGGCTCTGCGCCCGCTCGGGCTTGGGGTTaGCGGCCGGTGGGTCCGGCTGCTGCACCGACATGG +
Preference number: 6 (lower is better)
Translates to: TRAGSAPARAWG*RPVGPAAAPTW
Trigger: CCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp TTGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTaGGGGTTGGCGGCCGGTGGGTCCGGCTGCTGCACC +
Preference number: 6 (lower is better)
Translates to: LSDSGWLCARSG*GLAAGGSGCCT
Trigger: GGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp CGCTCGGGCTTGGGGTTGGCGGCCGGTGGGTCCGGCTaGTGCACCGACATGGTCCTGCGCAGGTGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: RSGLGLAAGGSG*CTDMVLRRWLR
Trigger: GCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp TCCTTGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTTGGGGTaGGCGGCCGGTGGGTCCGGCTGCTGCACCGACATGGTCCTGCGC +
Preference number: 6 (lower is better)
Translates to: SLSDSGWLCARSGLG*AAGGSGCCTDMVLR
Trigger: GCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp TCGTGGTCCTTGTCGGACTCGGGCTGGCTCTGCGCCCGCTCGGGCTaGGGGTTGGCGGCCGGTGGGTCCGGCTGCTGCACCGACATGGTC +
Preference number: 6 (lower is better)
Translates to: SWSLSDSGWLCARSG*GLAAGGSGCCTDMV
Trigger: GACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGAGCGGGCGCAGAGCCAGCCCGAGTCCGACAAGGACCACGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp TCGGGCTTGGGGTTGGCGGCCGGTGGGTCCGGCTGCTaGACCGACATGGTCCTGCGCAGGTGGTTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: SGLGLAAGGSGC*TDMVLRRWLRL
Trigger: CAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACCCCAAGCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp GCCGGTGGGTCCGGCTGCTGCACCGACATGGTCCTGCGCAGGTGGTaGCGCTTGCGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: AGGSGCCTDMVLRRW*RLRRNSGCACSPKL
Trigger: CAGCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp CGGCCGGTGGGTCCGGCTGCTGCACCGACATGGTCCTaGGCAGGTGGTTGCGCTTGCGCAGAAATTCTGGCT +
Preference number: 6 (lower is better)
Translates to: RPVGPAAAPTWS*AGGCACAEILA
Trigger: AGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GGGTCCGGCTGCTGCACCGACATGGTCCTGCGCAGGTaGTTGCGCTTGCGCAGAAATTCTGGCTGCGCGTGC +
Preference number: 6 (lower is better)
Translates to: GSGCCTDMVLRR*LRLRRNSGCAC
Trigger: GCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GGTTGGCGGCCGGTGGGTCCGGCTGCTGCACCGACATaGTCCTGCGCAGGTGGTTGCGCTTGCGCAGAAATT +
Preference number: 6 (lower is better)
Translates to: GWRPVGPAAAPT*SCAGGCACAEI
Trigger: AATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGACCCACCGGCCGCCAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp TCCGGCTGCTGCACCGACATGGTCCTGCGCAGGTGGTaGCGCTTGCGCAGAAATTCTGGCTGCGCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SGCCTDMVLRRW*RLRRNSGCACS
Trigger: GCTGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCAGCCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp GGGTCACCAGAGCCGGTGTCCAGGACGTTGCCCCCATaGAGCACCAGCAGAAGGACGTGTGTCTTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GSPEPVSRTLPP*STSRRTCVLQE
Trigger: CTCCTGCAAGACACACGTCCTTCTGCTGGTGCTGCATGGGGGCAACGTCCTGGACACCGGCTCTGGTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp GCTGCACCGACATGGTCCTGCGCAGGTGGTTGCGCTTaGGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAGC +
Preference number: 6 (lower is better)
Translates to: AAPTWSCAGGCA*AEILAARAAQS
Trigger: GCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp CCCGGTACAGTTCTCGCTGCTTCTCCTGCAGGATGCTaGATGTGCACGCTGTGGCCCCGTCTCCCTGACGCT +
Preference number: 6 (lower is better)
Translates to: PGTVLAASPAGC*MCTLWPRLPDA
Trigger: AGCGTCAGGGAGACGGGGCCACAGCGTGCACATCCAGCATCCTGCAGGAGAAGCAGCGAGAACTGTACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075258.13
CDS CAA 90 bp AGCCCAAAGCTGCCCTTGCGCAGGATCATGCGCGAGTTGTTCTTCTaGGGGCGAGAGCGGTGGCTGGCTTCTAGTGCCGCCAGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: SPKLPLRRIMRELFF*GRERWLASSAARCA
Trigger: AGCACACCTGGCGGCACTAGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp CGCTTGCGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAGCTGCCCTaGCGCAGGATCATGCGCGAGTTGTTCTTCTTGGGGCGAGAGCGG +
Preference number: 6 (lower is better)
Translates to: RLRRNSGCACSPKLP*RRIMRELFFLGRER
Trigger: CCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp ACACCCGGTACAGTTCTCGCTGCTTCTCCTGCAGGATaGTGGATGTGCACGCTGTGGCCCCGTCTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: TPGTVLAASPAG*WMCTLWPRLPD
Trigger: GTCAGGGAGACGGGGCCACAGCGTGCACATCCAGCATCCTGCAGGAGAAGCAGCGAGAACTGTACCGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075258.13
CDS GCA 72 bp TGCAGGAAGGGTCACCAGAGCCGGTGTCCAGGACGTTaGCCCCATGCAGCACCAGCAGAAGGACGTGTGTCT +
Preference number: 6 (lower is better)
Translates to: CRKGHQSRCPGR*PHAAPAEGRVS
Trigger: AGACACACGTCCTTCTGCTGGTGCTGCATGGGGGCAACGTCCTGGACACCGGCTCTGGTGACCCTTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp CGCTATGGGAGCTGCCTTTACTTAGCCTCCGTTCTGTaGGCTGGAATCTTGGGGCCTGAGGGGGCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: RYGSCLYLASVL*AGILGPEGARQ
Trigger: CTGCCTCGCCCCCTCAGGCCCCAAGATTCCAGCGCACAGAACGGAGGCTAAGTAAAGGCAGCTCCCATAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GCTGCTTCTCCTGCAGGATGCTGGATGTGCACGCTGTaGCCCCGTCTCCCTGACGCTCATCCAGCTTCCCTA +
Preference number: 6 (lower is better)
Translates to: AASPAGCWMCTL*PRLPDAHPASL
Trigger: TAGGGAAGCTGGATGAGCGTCAGGGAGACGGGGCCACAGCGTGCACATCCAGCATCCTGCAGGAGAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075258.13
CDS CCA 72 bp AGACTGCAGTCCTCTTCCACCACCACAGGGGTGTCCTaGGTACTGCTGATGCTCCCCTTCCGGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RLQSSSTTTGVS*VLLMLPFRLLL
Trigger: CAGCAGCAGCCGGAAGGGGAGCATCAGCAGTACCCAGGACACCCCTGTGGTGGTGGAAGAGGACTGCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp TGCGCGAGTTGTTCTTCTTGGGGCGAGAGCGGTGGCTaGCTTCTAGTGCCGCCAGGTGTGCTGCGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: CASCSSWGESGG*LLVPPGVLRSL
Trigger: AAGGCTACGCAGCACACCTGGCGGCACTAGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp TGCCCTTGCGCAGGATCATGCGCGAGTTGTTCTTCTTaGGGCGAGAGCGGTGGCTGGCTTCTAGTGCCGCCA +
Preference number: 6 (lower is better)
Translates to: CPCAGSCASCSS*GESGGWLLVPP
Trigger: TGGCGGCACTAGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp TGCTGCACCGACATGGTCCTGCGCAGGTGGTTGCGCTaGCGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAG +
Preference number: 6 (lower is better)
Translates to: CCTDMVLRRWLR*RRNSGCACSPK
Trigger: CTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCAAGCGCAACCACCTGCGCAGGACCATGTCGGTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GGCGCCAGGCTGTCCGAGGACTCTGAACTGTCGCTATaGGAGCTGCCTTTACTTAGCCTCCGTTCTGTGCGC +
Preference number: 6 (lower is better)
Translates to: GARLSEDSELSL*ELPLLSLRSVR
Trigger: GCGCACAGAACGGAGGCTAAGTAAAGGCAGCTCCCATAGCGACAGTTCAGAGTCCTCGGACAGCCTGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp CAGTGCCGAACCACATCCACTGCACCTGGCCGGACCTaGGGGTCACTTCCCATGATAGACACACTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: QCRTTSTAPGRT*GSLPMIDTLAA
Trigger: TGCCGCCAGTGTGTCTATCATGGGAAGTGACCCCAAGGTCCGGCCAGGTGCAGTGGATGTGGTTCGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp AGCCCAAAGCTGCCCTTGCGCAGGATCATGCGCGAGTaGTTCTTCTTGGGGCGAGAGCGGTGGCTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SPKLPLRRIMRE*FFLGRERWLAS
Trigger: AGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp ACGAGCGAGAAAGCCTCCGAGCAGATGGCAGGACAAGGGACAAACTaGATGAGGATGTGTCCCAGGGCAGCAGGGAAGTGGGCGCGCATG +
Preference number: 6 (lower is better)
Translates to: TSEKASEQMAGQGTN*MRMCPRAAGKWARM
Trigger: CATGCGCGCCCACTTCCCTGCTGCCCTGGGACACATCCTCATCAAGTTTGTCCCTTGTCCTGCCATCTGCTCGGAGGCTTTCTCGCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp AGACGTCGGGGCCGGGGCACATTGTATGTGATTCTGCCACTGTTGTaGGTGATTTCTGTGTCCAGGTGGACCCAGCGGCCTGACGACGGC +
Preference number: 6 (lower is better)
Translates to: RRRGRGTLYVILPLL*VISVSRWTQRPDDG
Trigger: GCCGTCGTCAGGCCGCTGGGTCCACCTGGACACAGAAATCACCAACAACAGTGGCAGAATCACATACAATGTGCCCCGGCCCCGACGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp CCCAGACGTCGGGGCCGGGGCACATTGTATGTGATTCTGCCACTGTaGTTGGTGATTTCTGTGTCCAGGTGGACCCAGCGGCCTGACGAC +
Preference number: 6 (lower is better)
Translates to: PRRRGRGTLYVILPL*LVISVSRWTQRPDD
Trigger: GTCGTCAGGCCGCTGGGTCCACCTGGACACAGAAATCACCAACAACAGTGGCAGAATCACATACAATGTGCCCCGGCCCCGACGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 72 bp GCGCGCATGACCTTCTCCAGCACAGAGCTGAAAGTGTaGATGTCGGCCGCCTTGCAGGAAGGGTCACCAGAG +
Preference number: 6 (lower is better)
Translates to: ARMTFSSTELKV*MSAALQEGSPE
Trigger: CTCTGGTGACCCTTCCTGCAAGGCGGCCGACATTCACACTTTCAGCTCTGTGCTGGAGAAGGTCATGCGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp GAAATTCTGGCTGCGCGTGCAGCCCAAAGCTGCCCTTaGGCAGGATCATGCGCGAGTTGTTCTTCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: EILAARAAQSCP*AGSCASCSSWG
Trigger: GCCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp TCCTCCACTCCACTGGAGACATCGACATTGCTCTTACTGAGCCGCTaGCTGCTGGCCAGACTGCAGTCCTCTTCCACCACCACAGGGGTG +
Preference number: 6 (lower is better)
Translates to: SSTPLETSTLLLLSR*LLARLQSSSTTTGV
Trigger: CACCCCTGTGGTGGTGGAAGAGGACTGCAGTCTGGCCAGCAGCAAGCGGCTCAGTAAGAGCAATGTCGATGTCTCCAGTGGAGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp GGCCTCTTGGGGTCCTCATCCTCCACTCCACTGGAGACATCGACATaGCTCTTACTGAGCCGCTTGCTGCTGGCCAGACTGCAGTCCTCT +
Preference number: 6 (lower is better)
Translates to: GLLGSSSSTPLETST*LLLSRLLLARLQSS
Trigger: AGAGGACTGCAGTCTGGCCAGCAGCAAGCGGCTCAGTAAGAGCAATGTCGATGTCTCCAGTGGAGTGGAGGATGAGGACCCCAAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp TGCGCAGAAATTCTGGCTGCGCGTGCAGCCCAAAGCTaGCCTTGCGCAGGATCATGCGCGAGTTGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: CAEILAARAAQS*PCAGSCASCSS
Trigger: AGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAATTTCTGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp TGGAGGAGTCACTCTGTTTCCGAGGCAACGGCCTCTTaGGGTCCTCATCCTCCACTCCACTGGAGACATCGA +
Preference number: 6 (lower is better)
Translates to: WRSHSVSEATAS*GPHPPLHWRHR
Trigger: TCGATGTCTCCAGTGGAGTGGAGGATGAGGACCCCAAGAGGCCGTTGCCTCGGAAACAGAGTGACTCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GCACGGTGGTTCGCAGTAACGTTCCGCAACTTGACCTaGGTTCGCTTACGCAGCCACTTCTCACGGGGGTTA +
Preference number: 6 (lower is better)
Translates to: ARWFAVTFRNLT*VRLRSHFSRGL
Trigger: TAACCCCCGTGAGAAGTGGCTGCGTAAGCGAACCCAGGTCAAGTTGCGGAACGTTACTGCGAACCACCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp GGGTCCTCATCCTCCACTCCACTGGAGACATCGACATaGCTCTTACTGAGCCGCTTGCTGCTGGCCAGACTG +
Preference number: 6 (lower is better)
Translates to: GSSSSTPLETST*LLLSRLLLARL
Trigger: CAGTCTGGCCAGCAGCAAGCGGCTCAGTAAGAGCAATGTCGATGTCTCCAGTGGAGTGGAGGATGAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp CGGGGCCGGGGCACATTGTATGTGATTCTGCCACTGTaGTTGGTGATTTCTGTGTCCAGGTGGACCCAGCGG +
Preference number: 6 (lower is better)
Translates to: RGRGTLYVILPL*LVISVSRWTQR
Trigger: CCGCTGGGTCCACCTGGACACAGAAATCACCAACAACAGTGGCAGAATCACATACAATGTGCCCCGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp AGAAATTCTGGCTGCGCGTGCAGCCCAAAGCTGCCCTaGCGCAGGATCATGCGCGAGTTGTTCTTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: RNSGCACSPKLP*RRIMRELFFLG
Trigger: CCCCAAGAAGAACAACTCGCGCATGATCCTGCGCAAGGGCAGCTTTGGGCTGCACGCGCAGCCAGAATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 72 bp CCTCCACTCCACTGGAGACATCGACATTGCTCTTACTaGGCCGCTTGCTGCTGGCCAGACTGCAGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PPLHWRHRHCSY*AACCWPDCSPL
Trigger: AAGAGGACTGCAGTCTGGCCAGCAGCAAGCGGCTCAGTAAGAGCAATGTCGATGTCTCCAGTGGAGTGGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 72 bp CAGGTGGAACTTGGGCTCCAGCAGTGGCTCAAGCCGTaGAGCAGAGGGATCTGCACAGTGGAAGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: QVELGLQQWLKP*SRGICTVEEAV
Trigger: TACAGCTTCTTCCACTGTGCAGATCCCTCTGCTTCACGGCTTGAGCCACTGCTGGAGCCCAAGTTCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp GGCTGTCCGAGGACTCTGAACTGTCGCTATGGGAGCTaGCTTTACTTAGCCTCCGTTCTGTGCGCTGGAATC +
Preference number: 6 (lower is better)
Translates to: GCPRTLNCRYGS*LYLASVLCAGI
Trigger: GATTCCAGCGCACAGAACGGAGGCTAAGTAAAGGCAGCTCCCATAGCGACAGTTCAGAGTCCTCGGACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp TCATTGGCACGGTGGTTCGCAGTAACGTTCCGCAACTaGACCTGGGTTCGCTTACGCAGCCACTTCTCACGG +
Preference number: 6 (lower is better)
Translates to: SLARWFAVTFRN*TWVRLRSHFSR
Trigger: CCGTGAGAAGTGGCTGCGTAAGCGAACCCAGGTCAAGTTGCGGAACGTTACTGCGAACCACCGTGCCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 90 bp CAGTCATATGTGGAGGAGTCACTCTGTTTCCGAGGCAACGGCCTCTaGGGGTCCTCATCCTCCACTCCACTGGAGACATCGACATTGCTC +
Preference number: 6 (lower is better)
Translates to: QSYVEESLCFRGNGL*GSSSSTPLETSTLL
Trigger: GAGCAATGTCGATGTCTCCAGTGGAGTGGAGGATGAGGACCCCAAGAGGCCGTTGCCTCGGAAACAGAGTGACTCCTCCACATATGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 72 bp CACCAGCAGAAGGACGTGTGTCTTGCAGGAGCGCTGTaGGCAGCCTTCCTCGCCATCTTCATGAATCTCGAT +
Preference number: 6 (lower is better)
Translates to: HQQKDVCLAGAL*AAFLAIFMNLD
Trigger: ATCGAGATTCATGAAGATGGCGAGGAAGGCTGCTCACAGCGCTCCTGCAAGACACACGTCCTTCTGCTGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS GCA 72 bp TTGCGAAGGAAGATGGCCTTCTGCCTCAGTGGGTCGTaGACCAGTCCGTCCGAGAAAAAGATCATGCCCTGT +
Preference number: 6 (lower is better)
Translates to: LRRKMAFCLSGS*TSPSEKKIMPC
Trigger: ACAGGGCATGATCTTTTTCTCGGACGGACTGGTGCACGACCCACTGAGGCAGAAGGCCATCTTCCTTCGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp CTCGCCATCTTCATGAATCTCGATACTTCCTTGGGCTaGGAACCTCTGCCTTCTGAGGGACACCCGGTACAG +
Preference number: 6 (lower is better)
Translates to: LAIFMNLDTSLG*EPLPSEGHPVQ
Trigger: CTGTACCGGGTGTCCCTCAGAAGGCAGAGGTTCCCAGCCCAAGGAAGTATCGAGATTCATGAAGATGGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp CCTTCGCTCAGGAACTGGCACTGGGTTTGGTACTTCTaGGTGGACCGGCCTACAATGAAGATCTGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PSLRNWHWVWYF*VDRPTMKIWEA
Trigger: TGCCTCCCAGATCTTCATTGTAGGCCGGTCCACCAAGAAGTACCAAACCCAGTGCCAGTTCCTGAGCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp GGGCCATCCTCAGCAGCAATTACATCATTGGCACGGTaGTTCGCAGTAACGTTCCGCAACTTGACCTGGGTT +
Preference number: 6 (lower is better)
Translates to: GPSSAAITSLAR*FAVTFRNLTWV
Trigger: AACCCAGGTCAAGTTGCGGAACGTTACTGCGAACCACCGTGCCAATGATGTAATTGCTGCTGAGGATGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CCA 72 bp CATGAGGTTGCGAAGGAAGATGGCCTTCTGCCTCAGTaGGTCGTGCACCAGTCCGTCCGAGAAAAAGATCAT +
Preference number: 6 (lower is better)
Translates to: HEVAKEDGLLPQ*VVHQSVREKDH
Trigger: ATGATCTTTTTCTCGGACGGACTGGTGCACGACCCACTGAGGCAGAAGGCCATCTTCCTTCGCAACCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 72 bp TGGAGTGGATGCTTGAGAGGAAGGCATGATGCTGGGTaGTCGCCTCACAGTCATATGTGGAGGAGTCACTCT +
Preference number: 6 (lower is better)
Translates to: WSGCLRGRHDAG*SPHSHMWRSHS
Trigger: AGAGTGACTCCTCCACATATGACTGTGAGGCGATCACCCAGCATCATGCCTTCCTCTCAAGCATCCACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS TCA 72 bp TTCAGCACACTGGAGTGGATGCTTGAGAGGAAGGCATaGTGCTGGGTGATCGCCTCACAGTCATATGTGGAG +
Preference number: 6 (lower is better)
Translates to: FSTLEWMLERKA*CWVIASQSYVE
Trigger: CTCCACATATGACTGTGAGGCGATCACCCAGCATCATGCCTTCCTCTCAAGCATCCACTCCAGTGTGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3
CDS CAA 72 bp GCAGCAGTGATTTTGATGAAACACTCCTGCATGAGGTaGCGAAGGAAGATGGCCTTCTGCCTCAGTGGGTCG +
Preference number: 6 (lower is better)
Translates to: AAVILMKHSCMR*RRKMAFCLSGS
Trigger: CGACCCACTGAGGCAGAAGGCCATCTTCCTTCGCAACCTCATGCAGGAGTGTTTCATCAAAATCACTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075258.13
ENSMUST00000108508.3