RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PITPNM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029406

Ensembl transcript IDs: ENSMUST00000086123.11, ENSMUST00000159677.8, ENSMUST00000161273.8, ENSMUST00000161644.3, ENSMUST00000161938.8, ENSMUST00000162812.8

Found 909 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTaGCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCC +
Preference number: 1 (lower is better)
Translates to: SRRERRWRPGFSRSS*PRWATKSQLCTWLA
Trigger: GGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp TGCACTGAGCTCTGGGTGGGGCAGGTGGACGGGTGGGTAGCAGTCTaGGACTGCCACTGGGCTGCCGTGGTGTCAACAGACCGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: CTELWVGQVDGWVAV*DCHWAAVVSTDRAG
Trigger: GCCTGCCCGGTCTGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCACCTGCCCCACCCAGAGCTCAGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 90 bp GCCATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTaGATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGCCTCCC +
Preference number: 1 (lower is better)
Translates to: AMSSKGPWVALRPCL*MSPATDVCAQARPP
Trigger: GGGAGGCCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp GAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTaGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTG +
Preference number: 1 (lower is better)
Translates to: ERRWRPGFSRSSCPR*ATKSQLCTWLASHL
Trigger: CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR TCA 90 bp AGAGGTGGCAGGCAGGGCCCAGACCCACGCCTGGCACCAGGAGGCTaGGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGC +
Preference number: 1 (lower is better)
Translates to: RGGRQGPDPRLAPGG*EINTEQDAQECLPG
Trigger: GCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTCCTGGTGCCAGGCGTGGGTCTGGGCCCTGCCTGCCACCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR TCA 90 bp GTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTaGGCTCTGGGTGGGGCAGGTGGACGGGTGGGTAGCAGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: VLCSQPGVTSVPGLH*ALGGAGGRVGSSLG
Trigger: TCCCAGACTGCTACCCACCCGTCCACCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp GGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTaGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGAC +
Preference number: 1 (lower is better)
Translates to: GWEGCVGMAMSSKGP*VALRPCLCMSPATD
Trigger: GTCAGTGGCTGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR TCA 90 bp GTGTCTCCTGTACACCTGTTGGGCCCAGCCACTTGGCCCTGCATCTaGGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGAC +
Preference number: 1 (lower is better)
Translates to: VSPVHLLGPATWPCI*VWPGRLRHRAPSLD
Trigger: GTCCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCCAAGTGGCTGGGCCCAACAGGTGTACAGGAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp CCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTaGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGT +
Preference number: 1 (lower is better)
Translates to: PAAQGGLPRASCARG*PHTCAVLTARSDIS
Trigger: ACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp ACTCAGGCACAGAGCCCCATCGCTGGACCCAGGGCTGGAGCTCCATaGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGT +
Preference number: 1 (lower is better)
Translates to: TQAQSPIAGPRAGAP*AQPMQGRCRRGVVS
Trigger: ACTGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAGCCCTGGGTCCAGCGATGGGGCTCTGTGCCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp CTCCCAGGCTGGGCTAGGCGGCCGATCCTGGCTCCTCTTCCATCATaGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTA +
Preference number: 1 (lower is better)
Translates to: LPGWARRPILAPLPS*AGHPARSHNQLGSL
Trigger: TAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAGGATCGGCCGCCTAGCCCAGCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp GGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATaGGAAGGGGCGCCAGTGGACAGAGAGGTGGCAGGCAGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: GVNKKWTGPIGAATK*EGAPVDREVAGRAQ
Trigger: CTGGGCCCTGCCTGCCACCTCTCTGTCCACTGGCGCCCCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp AAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTaGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATA +
Preference number: 1 (lower is better)
Translates to: KMPRNASQAGLGGRS*LLFHHGLDILPDPI
Trigger: TATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATaGGCATTCAGAGCCACAAGGGGCTGCCCAGGGGAGAGACCAAGC +
Preference number: 1 (lower is better)
Translates to: GLLLLSLAWLTAGQA*AFRATRGCPGERPS
Trigger: GCTTGGTCTCTCCCCTGGGCAGCCCCTTGTGGCTCTGAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR GCA 90 bp GCTTCTATTCTAACAGGCCTGGGGTGGGTGGCAGCCAGCAAGATCTaGCTCACCCTTTGGTTACAAATGGCCAGGCCTGAGCCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: ASILTGLGWVAASKI*LTLWLQMARPEPCS
Trigger: GCTGCAGGGCTCAGGCCTGGCCATTTGTAACCAAAGGGTGAGGCAGATCTTGCTGGCTGCCACCCACCCCAGGCCTGTTAGAATAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CCA 90 bp GAAGGCAGGGGCTCAGACCCAGTGTGTAGGATGCCCAACCGTATTTaGGGAGCAATAAGATGGCTGTGTGCCCTTAGGCTGGAGAGTGAG +
Preference number: 1 (lower is better)
Translates to: EGRGSDPVCRMPNRI*GAIRWLCALRLESE
Trigger: CTCACTCTCCAGCCTAAGGGCACACAGCCATCTTATTGCTCCCCAAATACGGTTGGGCATCCTACACACTGGGTCTGAGCCCCTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 90 bp TGTGGTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATaGATGTCAACATGTCTGGAGCCAGGAGATGGTAACGGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: CGDRPWPGSAETGFS*MSTCLEPGDGNGSP
Trigger: TGGAGACCCGTTACCATCTCCTGGCTCCAGACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp TGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTaGAGCCGCTACCAAATGGGAAGGGGCGCCAGTGGACAGAGAGGT +
Preference number: 1 (lower is better)
Translates to: WTVENWSQQEVDWTH*SRYQMGRGASGQRG
Trigger: ACCTCTCTGTCCACTGGCGCCCCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp TACGATATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTaGACTACTCTGTGTGGTGACAGGCCCTGGCCTGGGTCAGCAGAG +
Preference number: 1 (lower is better)
Translates to: YDMAFLSCLREDFPH*TTLCGDRPWPGSAE
Trigger: CTCTGCTGACCCAGGCCAGGGCCTGTCACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCATATCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 90 bp GAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTaGGCTGACACTGAGTTAAGAAAAGGAAGCAGCCGAAGATTGCCT +
Preference number: 1 (lower is better)
Translates to: EWGPVTVLGVPNVAG*ADTELRKGSSRRLP
Trigger: AGGCAATCTTCGGCTGCTTCCTTTTCTTAACTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp AAAACCAGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTaGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGGGCGCCA +
Preference number: 1 (lower is better)
Translates to: KTSEVGQLRTGVNKK*TGPIGAATKWEGAP
Trigger: TGGCGCCCCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp CTGCCGTGGTGTCAACAGACCGGGCAGGCAGCAGAAATTACGATATaGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTA +
Preference number: 1 (lower is better)
Translates to: LPWCQQTGQAAEITI*PFSPACVKISHTGL
Trigger: TAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCATATCGTAATTTCTGCTGCCTGCCCGGTCTGTTGACACCACGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 90 bp ACAGACCGGGCAGGCAGCAGAAATTACGATATGGCCTTTCTCTCCTaGTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTGAC +
Preference number: 1 (lower is better)
Translates to: TDRAGSRNYDMAFLS*LREDFPHWTTLCGD
Trigger: GTCACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCATATCGTAATTTCTGCTGCCTGCCCGGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp CGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTGACAGGCCCTaGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGT +
Preference number: 1 (lower is better)
Translates to: REDFPHWTTLCGDRP*PGSAETGFSCMSTC
Trigger: ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 90 bp GGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCTaGAGCCAGGAGATGGTAACGGGTCTCCACTCTCAAAAACTAGTG +
Preference number: 1 (lower is better)
Translates to: GLGQQRLDFHACQHV*SQEMVTGLHSQKLV
Trigger: CACTAGTTTTTGAGAGTGGAGACCCGTTACCATCTCCTGGCTCCAGACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR TCA 90 bp TCTCCACTCTCAAAAACTAGTGCAAAACCAGTGAGGTTGGACAGTTaGGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCG +
Preference number: 1 (lower is better)
Translates to: SPLSKTSAKPVRLDS*ELESTRSGLDPLEP
Trigger: CGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACTGGTTTTGCACTAGTTTTTGAGAGTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR TCA 90 bp GAGATGGTAACGGGTCTCCACTCTCAAAAACTAGTGCAAAACCAGTaGGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGG +
Preference number: 1 (lower is better)
Translates to: EMVTGLHSQKLVQNQ*GWTVENWSQQEVDW
Trigger: CCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACTGGTTTTGCACTAGTTTTTGAGAGTGGAGACCCGTTACCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGCCTGGCCTAGCACCATaGAGACCACAGCGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWPGLAP*RPQRLL
Trigger: CAGGAGGCGCTGTGGTCTCCATGGTGCTAGGCCAGG...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGCCCCCGGTGGGGCAGTaGTTGTCGGGCCAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGPPVGQ*LSGQQL
Trigger: AAGCTGCTGGCCCGACAATCACTGCCCCACCGGGGG...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGCCTGGCCTAGCACCATaGAGACCACAGCGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: TEQDAQECLPGWARRPILPGLAP*RPQRLL
Trigger: CAGGAGGCGCTGTGGTCTCCATGGTGCTAGGCCAGG...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGGGAAGGGGCGCCAGTaGACAGAGAGGTGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLGKGRQ*TERWQA
Trigger: TGCCTGCCACCTCTCTGTCCACTGGCGCCCCTTCCC...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAGGGTGGGTAGCAGTCTaGGACTGCCACTGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: QGPQARLSGALSQCWVFLGWVAV*DCHWAA
Trigger: GGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCC...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAGGGTGGGTAGCAGTCTaGGACTGCCACTGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SSCPRWATKSQLCTWLASGWVAV*DCHWAA
Trigger: GGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCC...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGACTGCACTGAGCTCTaGGTGGGGCAGGTGGACGGG +
Preference number: 2 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLDCTEL*VGQVDG
Trigger: CCCGTCCACCTGCCCCACCCAGAGCTCAGTGCAGTC...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAGACTACTCTGTGTGGTaGCAGGCCCTGGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: SSCPRWATKSQLCTWLASDYSVW*QALAWV
Trigger: GACCCAGGCCAGGGCCTGTCACCACACAGAGTAGTC...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGTAGCAGTCTGGGACTaGCACTGGGCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAVAVWD*HWAAVV
Trigger: CACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTAC...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGGAGAGGTGTGGTCAGTaGTGTGTGGAAGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GPASESGLADSGTEPHRWERCGQ*CVEGRG
Trigger: GCCCCTGCCTTCCACACAGCACTGACCACACCTCTC...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACACCTGGCCTAGCACCATaGAGACCACAGCGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTPGLAP*RPQRLL
Trigger: CAGGAGGCGCTGTGGTCTCCATGGTGCTAGGCCAGG...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGGGCATCAGGCAAGGCTaGGAGGGCTGTGTTGGCATG +
Preference number: 2 (lower is better)
Translates to: TEQDAQECLPGWARRPILGIRQG*EGCVGM
Trigger: CATGCCAACACAGCCCTCCCAGCCTTGCCTGATGCC...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCCAGTGGACAGAGAGGTaGCAGGCAGGGCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: RGWPHTCAVLTARSDISSQWTER*QAGPRP
Trigger: GGGTCTGGGCCCTGCCTGCCACCTCTCTGTCCACTG...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGACTGCACTGAGCTCTaGGTGGGGCAGGTGGACGGG +
Preference number: 2 (lower is better)
Translates to: RGWPHTCAVLTARSDISSDCTEL*VGQVDG
Trigger: CCCGTCCACCTGCCCCACCCAGAGCTCAGTGCAGTC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGCTGGCACCAGGAGGCTaGGAGATCAACACGGAGCAA +
Preference number: 2 (lower is better)
Translates to: GPASESGLADSGTEPHRWLAPGG*EINTEQ
Trigger: TTGCTCCGTGTTGATCTCTCAGCCTCCTGGTGCCAG...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGCAAGATGCCCAGGAATaGCTCCCAGGCTGGGCTAGG +
Preference number: 2 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLQDAQE*LPGWAR
Trigger: CCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTG...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGAGAGCCACAAGGGGCTaGCCAGGGGAGAGACCAAGC +
Preference number: 2 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGRATRG*PGERPS
Trigger: GCTTGGTCTCTCCCCTGGGCAGCCCCTTGTGGCTCT...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGGGAGGGCCGGTGCCCTaGCCTAGCACCATGGAGACC +
Preference number: 2 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEGGPVP*PSTMET
Trigger: GGTCTCCATGGTGCTAGGCCAGGGCACCGGCCCTCC...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAGGCATCAGGCAAGGCTaGGAGGGCTGTGTTGGCATG +
Preference number: 2 (lower is better)
Translates to: SSCPRWATKSQLCTWLASGIRQG*EGCVGM
Trigger: CATGCCAACACAGCCCTCCCAGCCTTGCCTGATGCC...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCACAGTGGACAGAGAGGTaGCAGGCAGGGCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: LELHGLSQCREGAGEVWSQWTER*QAGPRP
Trigger: GGGTCTGGGCCCTGCCTGCCACCTCTCTGTCCACTG...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGCATGTCAACATGTCTaGAGCCAGGAGATGGTAACG +
Preference number: 2 (lower is better)
Translates to: APEQAGASVEARLLQVQLACQHV*SQEMVT
Trigger: CGTTACCATCTCCTGGCTCCAGACATGTTGACATGC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAAGCTGTGCACGTGGCTaGCCTCACACCTGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: QGPQARLSGALSQCWVFLSCARG*PHTCAV
Trigger: CACAGCACAGGTGTGAGGCCAGCCACGTGCACAGCT...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGAAGTCAGTGGAATTGTaGGCCAGGTGCAGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: GPASESGLADSGTEPHRWKSVEL*ARCRAH
Trigger: GTGGGCCCTGCACCTGGCCCACAATTCCACTGACTT...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTCTGGCACCAGGAGGCTaGGAGATCAACACGGAGCAA +
Preference number: 2 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVALAPGG*EINTEQ
Trigger: TTGCTCCGTGTTGATCTCTCAGCCTCCTGGTGCCAG...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCTCAGGCCATGTCTGTaGATGTCCCCAGCCACTGAC +
Preference number: 2 (lower is better)
Translates to: TARSDISSGTALSSGWGRLRPCL*MSPATD
Trigger: GTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACACAACACGGAGCAAGATaGCCAGGAATGCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTQHGAR*PGMPPR
Trigger: CCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTG...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCTTTCTCTCCTGCTTaGGTGAAGATTTCCCACACT +
Preference number: 2 (lower is better)
Translates to: APEQAGASVEARLLQVQLPFSPA*VKISHT
Trigger: AGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGTAGCAGTCTGGGACTaGCACTGGGCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: LELHGLSQCREGAGEVWSVAVWD*HWAAVV
Trigger: CACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTAC...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCAGTGGACAGAGAGGTaGCAGGCAGGGCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEQWTER*QAGPRP
Trigger: GGGTCTGGGCCCTGCCTGCCACCTCTCTGTCCACTG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTGTGGTGACAGGCCCTaGCCTGGGTCAGCAGAGACT +
Preference number: 2 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGCGDRP*PGSAET
Trigger: AGTCTCTGCTGACCCAGGCCAGGGCCTGTCACCACA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGGACTGCACTGAGCTCTaGGTGGGGCAGGTGGACGGG +
Preference number: 2 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEDCTEL*VGQVDG
Trigger: CCCGTCCACCTGCCCCACCCAGAGCTCAGTGCAGTC...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTAGGCGGGAGCGTCGGTaGAGGCCAGGCTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGRRERR*RPGFSR
Trigger: CCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCAGGCGGGAGCGTCGGTaGAGGCCAGGCTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFRRERR*RPGFSR
Trigger: CCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CAA 90 bp CACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCCACTaGGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGC +
Preference number: 2 (lower is better)
Translates to: HSRVSVSCTPVGPSH*ALHLSLAWQTQAQS
Trigger: GCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCCAAGTGGCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGGACTACTCTGTGTGGTaGCAGGCCCTGGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEDYSVW*QALAWV
Trigger: GACCCAGGCCAGGGCCTGTCACCACACAGAGTAGTC...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACACTGGGAGGGCTGTGTTaGCATGGCCATGTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTLGGLC*HGHVFQ
Trigger: TTGGAAGACATGGCCATGCCAACACAGCCCTCCCAG...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGGCTCCTCTTCCATCATaGGCTGGACATCCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: TARSDISSGTALSSGWGRAPLPS*AGHPAR
Trigger: TCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGC...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGTGGACTGGACCCATTaGAGCCGCTACCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTVDWTH*SRYQMG
Trigger: TCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCAC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGTGGACTGGACCCATTaGAGCCGCTACCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAVDWTH*SRYQMG
Trigger: TCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCAC...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCGGGCAGGTGGACGGGTaGGTAGCAGTCTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFGQVDG*VAVWDC
Trigger: GCAGTCCCAGACTGCTACCCACCCGTCCACCTGCCC...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCATCCAGCTGCCCAAGGTaGGCTACCAAGAGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: LELHGLSQCREGAGEVWSSSCPR*ATKSQL
Trigger: CAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTCAGGCCATGTCTGTaGATGTCCCCAGCCACTGAC +
Preference number: 2 (lower is better)
Translates to: EAERSTRSKMPRNASQAGLRPCL*MSPATD
Trigger: GTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTGTAGCAGTCTGGGACTaGCACTGGGCTGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGVAVWD*HWAAVV
Trigger: CACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTAC...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTACATCAGTTCCGGGACTaGACTGAGCTCTGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVHQFRD*TELWVG
Trigger: CCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATG...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCGCCCAGACCCACGCCTaGCACCAGGAGGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSAQTHA*HQEAER
Trigger: TCTCTCAGCCTCCTGGTGCCAGGCGTGGGTCTGGGC...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCGGGAAGGGGCGCCAGTaGACAGAGAGGTGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSGKGRQ*TERWQA
Trigger: TGCCTGCCACCTCTCTGTCCACTGGCGCCCCTTCCC...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGTGGGTCAGCAGAGACTaGATTTTCATGCATGTCAAC +
Preference number: 2 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWWVSRD*IFMHVN
Trigger: GTTGACATGCATGAAAATCCAGTCTCTGCTGACCCA...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GTCCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTAGGGTGGGTAGCAGTCTaGGACTGCCACTGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VPHACAVHSYTAESVSPVGWVAV*DCHWAA
Trigger: GGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCC...TACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCGGGCAGGTGGACGGGTaGGTAGCAGTCTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSGQVDG*VAVWDC
Trigger: GCAGTCCCAGACTGCTACCCACCCGTCCACCTGCCC...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAGACTGCACTGAGCTCTaGGTGGGGCAGGTGGACGGG +
Preference number: 2 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTDCTEL*VGQVDG
Trigger: CCCGTCCACCTGCCCCACCCAGAGCTCAGTGCAGTC...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCCTGGCCTCACACCTGTaGTGTGCTCACAGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSLASHL*CAHSPE
Trigger: CTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAG...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGCCTAATGTAGCAGGCTaGGCTGACACTGAGTTAAGA +
Preference number: 2 (lower is better)
Translates to: GPASESGLADSGTEPHRWPNVAG*ADTELR
Trigger: TCTTAACTCAGTGTCAGCGCAGCCTGCTACATTAGG...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACCTGGGAGGGCTGTGTTaGCATGGCCATGTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHLGGLC*HGHVFQ
Trigger: TTGGAAGACATGGCCATGCCAACACAGCCCTCCCAG...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACCAGTGGACAGAGAGGTaGCAGGCAGGGCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDQWTER*QAGPRP
Trigger: GGGTCTGGGCCCTGCCTGCCACCTCTCTGTCCACTG...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGGCATGTCAACATGTCTaGAGCCAGGAGATGGTAACG +
Preference number: 2 (lower is better)
Translates to: TARSDISSGTALSSGWGRACQHV*SQEMVT
Trigger: CGTTACCATCTCCTGGCTCCAGACATGTTGACATGC...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCTGTGGTGACAGGCCCTaGCCTGGGTCAGCAGAGACT +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFCGDRP*PGSAET
Trigger: AGTCTCTGCTGACCCAGGCCAGGGCCTGTCACCACA...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGATGCCCAACCGTATTTaGGGAGCAATAAGATGGCTG +
Preference number: 2 (lower is better)
Translates to: GPASESGLADSGTEPHRWMPNRI*GAIRWL
Trigger: CAGCCATCTTATTGCTCCCCAAATACGGTTGGGCAT...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAAGCTGTGCACGTGGCTaGCCTCACACCTGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTSCARG*PHTCAV
Trigger: CACAGCACAGGTGTGAGGCCAGCCACGTGCACAGCT...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCAAGTCAGTGGAATTGTaGGCCAGGTGCAGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFKSVEL*ARCRAH
Trigger: GTGGGCCCTGCACCTGGCCCACAATTCCACTGACTT...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAGTGGTCAGTGCTGTGTaGAAGGCAGGGGCTCAGACC +
Preference number: 2 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTVVSAV*KAGAQT
Trigger: GGTCTGAGCCCCTGCCTTCCACACAGCACTGACCAC...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp GTCCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACTGGCACCAGGAGGCTaGGAGATCAACACGGAGCAA +
Preference number: 2 (lower is better)
Translates to: VPHACAVHSYTAESVSPVLAPGG*EINTEQ
Trigger: TTGCTCCGTGTTGATCTCTCAGCCTCCTGGTGCCAG...TACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACAACACGGAGCAAGATaGCCAGGAATGCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTQHGAR*PGMPPR
Trigger: CCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTG...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCCAACACGGAGCAAGATaGCCAGGAATGCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSQHGAR*PGMPPR
Trigger: CCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTG...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCTTCTCCAGGTCCAGCTaGCCAAGGTGGGCTACCAAG +
Preference number: 2 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSFSRSS*PRWATK
Trigger: CTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAGAA...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCCTGGCCTAGCACCATaGAGACCACAGCGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: WPFSPACVKISHTGLLCVPGLAP*RPQRLL
Trigger: CAGGAGGCGCTGTGGTCTCCATGGTGCTAGGCCAGG...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGGCATCAGGCAAGGCTaGGAGGGCTGTGTTGGCATG +
Preference number: 2 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDGIRQG*EGCVGM
Trigger: CATGCCAACACAGCCCTCCCAGCCTTGCCTGATGCC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTGGCATCAGGCAAGGCTaGGAGGGCTGTGTTGGCATG +
Preference number: 2 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCGIRQG*EGCVGM
Trigger: CATGCCAACACAGCCCTCCCAGCCTTGCCTGATGCC...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCCCAGACCCACGCCTaGCACCAGGAGGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCAQTHA*HQEAER
Trigger: TCTCTCAGCCTCCTGGTGCCAGGCGTGGGTCTGGGC...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACGCATGTCAACATGTCTaGAGCCAGGAGATGGTAACG +
Preference number: 2 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHACQHV*SQEMVT
Trigger: CGTTACCATCTCCTGGCTCCAGACATGTTGACATGC...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAGCAGAAATTACGATATaGCCTTTCTCTCCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: QGPQARLSGALSQCWVFLAEITI*PFSPAC
Trigger: GCAAGCAGGAGAGAAAGGCCATATCGTAATTTCTGC...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACATCTGAGTCTGGCCTaGCAGACTCAGGCACAGAGC +
Preference number: 2 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTHLSLA*QTQAQS
Trigger: GCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATG...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGCTCAGGCCATGTCTGTaGATGTCCCCAGCCACTGAC +
Preference number: 2 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKLRPCL*MSPATD
Trigger: GTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTGGGTCAGCAGAGACTaGATTTTCATGCATGTCAAC +
Preference number: 2 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGWVSRD*IFMHVN
Trigger: GTTGACATGCATGAAAATCCAGTCTCTGCTGACCCA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAAGGCGGGAGCGTCGGTaGAGGCCAGGCTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: ESELWLPGVDIKRTALRKRRERR*RPGFSR
Trigger: CCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGGCCCAGACCCACGCCTaGCACCAGGAGGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEAQTHA*HQEAER
Trigger: TCTCTCAGCCTCCTGGTGCCAGGCGTGGGTCTGGGC...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGCAGAAATTACGATATaGCCTTTCTCTCCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: LELHGLSQCREGAGEVWSAEITI*PFSPAC
Trigger: GCAAGCAGGAGAGAAAGGCCATATCGTAATTTCTGC...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GTCCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTATGGGGAGCAATAAGATaGCTGTGTGCCCTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: VPHACAVHSYTAESVSPVWGAIR*LCALRL
Trigger: CAGCCTAAGGGCACACAGCCATCTTATTGCTCCCCA...TACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTGGTGCAGGAGAGGTGTaGTCAGTGCTGTGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIGAGEV*SVLCGR
Trigger: CCTTCCACACAGCACTGACCACACCTCTCCTGCACC...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGTGGTTGGTGATGGGTaGCATCAAGGCTCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDVVGDG*HQGSVL
Trigger: CAGGACTGAGCCTTGATGCCACCCATCACCAACCAC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CAA 90 bp GACCGGGCAGGCAGCAGAAATTACGATATGGCCTTTCTCTCCTGCTaGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTGACAGG +
Preference number: 2 (lower is better)
Translates to: DRAGSRNYDMAFLSC*REDFPHWTTLCGDR
Trigger: CCTGTCACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCATATCGTAATTTCTGCTGCCTGCCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAGACTACTCTGTGTGGTaGCAGGCCCTGGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: ESELWLPGVDIKRTALRKDYSVW*QALAWV
Trigger: GACCCAGGCCAGGGCCTGTCACCACACAGAGTAGTC...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAGAATTGTGGGCCAGGTaGAGGGCCCACAGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: ESELWLPGVDIKRTALRKELWAR*RAHRPD
Trigger: GTCTGGCCTGTGGGCCCTGCACCTGGCCCACAATTC...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCATGCCCAACCGTATTTaGGGAGCAATAAGATGGCTG +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFMPNRI*GAIRWL
Trigger: CAGCCATCTTATTGCTCCCCAAATACGGTTGGGCAT...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCTGGGTCAGCAGAGACTaGATTTTCATGCATGTCAAC +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFWVSRD*IFMHVN
Trigger: GTTGACATGCATGAAAATCCAGTCTCTGCTGACCCA...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGTGTGGTGACAGGCCCTaGCCTGGGTCAGCAGAGACT +
Preference number: 2 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQECGDRP*PGSAET
Trigger: AGTCTCTGCTGACCCAGGCCAGGGCCTGTCACCACA...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCGCAGAAATTACGATATaGCCTTTCTCTCCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFAEITI*PFSPAC
Trigger: GCAAGCAGGAGAGAAAGGCCATATCGTAATTTCTGC...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCATGCCCAACCGTATTTaGGGAGCAATAAGATGGCTG +
Preference number: 2 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSMPNRI*GAIRWL
Trigger: CAGCCATCTTATTGCTCCCCAAATACGGTTGGGCAT...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGTGAGGTTGGACAGTTaGGAACTGGAGTCAACAAGA +
Preference number: 2 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDVRLDS*ELESTR
Trigger: TCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCAC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTGAGGTTGGACAGTTaGGAACTGGAGTCAACAAGA +
Preference number: 2 (lower is better)
Translates to: WPFSPACVKISHTGLLCVVRLDS*ELESTR
Trigger: TCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCAC...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAGCCCAGGGGACTATTaGTGTTGTCCTTGGCATGGC +
Preference number: 2 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQESPGDY*CCPWHG
Trigger: GCCATGCCAAGGACAACAGCAATAGTCCCCTGGGCT...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAGTGGACTGGACCCATTaGAGCCGCTACCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: ESELWLPGVDIKRTALRKVDWTH*SRYQMG
Trigger: TCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCAC...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCCTTTATACAGAACGCTaGAAACAACACAAAGCTACA +
Preference number: 2 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFLYTER*KQHKAT
Trigger: TGTAGCTTTGTGTTGTTTCCAGCGTTCTGTATAAAG...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAGAATTGTGGGCCAGGTaGAGGGCCCACAGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: FHGILVHKIITALYRTLEELWAR*RAHRPD
Trigger: GTCTGGCCTGTGGGCCCTGCACCTGGCCCACAATTC...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACCTTTCTCTCCTGCTTaGGTGAAGATTTCCCACACT +
Preference number: 2 (lower is better)
Translates to: ESELWLPGVDIKRTALRKPFSPA*VKISHT
Trigger: AGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAACTCAGGCCATGTCTGTaGATGTCCCCAGCCACTGAC +
Preference number: 2 (lower is better)
Translates to: FHGILVHKIITALYRTLELRPCL*MSPATD
Trigger: GTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACAACACGGAGCAAGATaGCCAGGAATGCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: GILVHKIITALYRTLETTQHGAR*PGMPPR
Trigger: CCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAACTCACACCTGTGCTGTaGTCACAGCCCGGAGTGACA +
Preference number: 2 (lower is better)
Translates to: FHGILVHKIITALYRTLELTPVL*SQPGVT
Trigger: TGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR GCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAATGGTGGGACAGATATTaGACTTTTACTGTGACAGTT +
Preference number: 2 (lower is better)
Translates to: PLLLSVEVGLPQENEPKEWWDRY*TFTVTV
Trigger: AACTGTCACAGTAAAAGTGCAATATCTGTCCCACCA...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAGCTCCTCTTCCATCATaGGCTGGACATCCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: GILVHKIITALYRTLETTAPLPS*AGHPAR
Trigger: TCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGC...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACATGGGGAGCAATAAGATaGCTGTGTGCCCTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: GILVHKIITALYRTLETTWGAIR*LCALRL
Trigger: CAGCCTAAGGGCACACAGCCATCTTATTGCTCCCCA...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAGCATGTCAACATGTCTaGAGCCAGGAGATGGTAACG +
Preference number: 2 (lower is better)
Translates to: GILVHKIITALYRTLETTACQHV*SQEMVT
Trigger: CGTTACCATCTCCTGGCTCCAGACATGTTGACATGC...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR TCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACAAAGCTACACCTTATaGGAAGACCCTGAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: GILVHKIITALYRTLETTQSYTL*EDPEGL
Trigger: GAGACCTTCAGGGTCTTCTCATAAGGTGTAGCTTTG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CCA 72 bp GGGCCCAGCCACTTGGCCCTGCATCTGAGTCTGGCCTaGCAGACTCAGGCACAGAGCCCCATCGCTGGACCC +
Preference number: 3 (lower is better)
Translates to: GPSHLALHLSLA*QTQAQSPIAGP
Trigger: GGGTCCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCCAAGTGGCTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 72 bp TCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTaGATGTCCCCAGCCACTGACGTGTGTGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: SKGPWVALRPCL*MSPATDVCAQA
Trigger: GGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 72 bp GAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTaGCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACG +
Preference number: 3 (lower is better)
Translates to: ERRWRPGFSRSS*PRWATKSQLCT
Trigger: CGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 72 bp GCTGGGCAGGCATGGGCATTCAGAGCCACAAGGGGCTaGCCAGGGGAGAGACCAAGCCCACTGACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: AGQAWAFRATRG*PGERPSPLTSG
Trigger: GCCTGAGGTCAGTGGGCTTGGTCTCTCCCCTGGGCAGCCCCTTGTGGCTCTGAATGCCCATGCCTGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CCA 72 bp CTCTGGGTGGGGCAGGTGGACGGGTGGGTAGCAGTCTaGGACTGCCACTGGGCTGCCGTGGTGTCAACAGAC +
Preference number: 3 (lower is better)
Translates to: LWVGQVDGWVAV*DCHWAAVVSTD
Trigger: GTCTGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCACCTGCCCCACCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp GACTCAGGCACAGAGCCCCATCGCTGGACCCAGGGCTaGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: DSGTEPHRWTQG*SSMGSANAGKV
Trigger: CACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAGCCCTGGGTCCAGCGATGGGGCTCTGTGCCTGAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 72 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTaGACGTGGCTGGCCTCACACCTGTGCTGTGCTCAC +
Preference number: 3 (lower is better)
Translates to: SSCPRWATKSQL*TWLASHLCCAH
Trigger: GTGAGCACAGCACAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 72 bp CTGGACCCAGGGCTGGAGCTCCATGGGCTCAGCCAATaGAGGGAAGGTGCAGGAGAGGTGTGGTCAGTGCTG +
Preference number: 3 (lower is better)
Translates to: LDPGLELHGLSQ*REGAGEVWSVL
Trigger: CAGCACTGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAGCCCTGGGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp AGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTaGCTCCTCTTCCATCATGGGCTGGACATCCTGCCA +
Preference number: 3 (lower is better)
Translates to: RNASQAGLGGRS*LLFHHGLDILP
Trigger: TGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR TCA 72 bp CTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTaGCATCAGTTCCGGGACTGCACTGAGCTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: LASHLCCAHSPE*HQFRDCTELWV
Trigger: CACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp GGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTaGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCA +
Preference number: 3 (lower is better)
Translates to: GCVGMAMSSKGP*VALRPCLCMSP
Trigger: TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp AACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTaGGCTAGGCGGCCGATCCTGGCTCCTCTTCCATCA +
Preference number: 3 (lower is better)
Translates to: NTEQDAQECLPG*ARRPILAPLPS
Trigger: TGATGGAAGAGGAGCCAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp TGGGCTAGGCGGCCGATCCTGGCTCCTCTTCCATCATaGGCTGGACATCCTGCCAGATCCCATAACCAGCTG +
Preference number: 3 (lower is better)
Translates to: WARRPILAPLPS*AGHPARSHNQL
Trigger: CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAGGATCGGCCGCCTAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp AAGGTTTTGGAGGGAGGCTGCCCGTCTCACCATCTATaGCTGAGGGCCCTGGGAGAGCCCAGGGGACTATTG +
Preference number: 3 (lower is better)
Translates to: KVLEGGCPSHHL*LRALGEPRGLL
Trigger: CAATAGTCCCCTGGGCTCTCCCAGGGCCCTCAGCCATAGATGGTGAGACGGGCAGCCTCCCTCCAAAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR GCA 72 bp CTAACAGGCCTGGGGTGGGTGGCAGCCAGCAAGATCTaGCTCACCCTTTGGTTACAAATGGCCAGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: LTGLGWVAASKI*LTLWLQMARPE
Trigger: CTCAGGCCTGGCCATTTGTAACCAAAGGGTGAGGCAGATCTTGCTGGCTGCCACCCACCCCAGGCCTGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CCA 72 bp GGGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTaGGCAGGCATGGGCATTCAGAGCCACAAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: GTIAVVLGMADS*AGMGIQSHKGL
Trigger: CAGCCCCTTGTGGCTCTGAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGAGTGAGGTTGGACAGTaGAGAACTGGAGTCAACAAG +
Preference number: 3 (lower is better)
Translates to: GPASESGLADSGTEPHRWSEVGQ*RTGVNK
Trigger: CTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCAGGAAGTCAGTGGAATaGTGGGCCAGGTGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSRKSVE*WARCRA
Trigger: GGCCCTGCACCTGGCCCACAATTCCACTGACTTCCT...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp CAGCCAGCAAGATCTGCCTCACCCTTTGGTTACAAATaGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACA +
Preference number: 3 (lower is better)
Translates to: QPARSASPFGYK*PGLSPAAQHLT
Trigger: TGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAACCAAAGGGTGAGGCAGATCTTGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGAGTGAGGTTGGACAGTaGAGAACTGGAGTCAACAAG +
Preference number: 3 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGSEVGQ*RTGVNK
Trigger: CTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CCA 72 bp GGCTCAGACCCAGTGTGTAGGATGCCCAACCGTATTTaGGGAGCAATAAGATGGCTGTGTGCCCTTAGGCTG +
Preference number: 3 (lower is better)
Translates to: GSDPVCRMPNRI*GAIRWLCALRL
Trigger: CAGCCTAAGGGCACACAGCCATCTTATTGCTCCCCAAATACGGTTGGGCATCCTACACACTGGGTCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR GCA 72 bp AGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATaGATGTCAACATGTCTGGAGCCAGGAGATGGTAAC +
Preference number: 3 (lower is better)
Translates to: RPWPGSAETGFS*MSTCLEPGDGN
Trigger: GTTACCATCTCCTGGCTCCAGACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp TGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTaGACCCATTGGAGCCGCTACCAAATGGGAAGGGGC +
Preference number: 3 (lower is better)
Translates to: WTVENWSQQEVD*THWSRYQMGRG
Trigger: GCCCCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp TGTAGGATGCCCAACCGTATTTGGGGAGCAATAAGATaGCTGTGTGCCCTTAGGCTGGAGAGTGAGCTGTGG +
Preference number: 3 (lower is better)
Translates to: CRMPNRIWGAIR*LCALRLESELW
Trigger: CCACAGCTCACTCTCCAGCCTAAGGGCACACAGCCATCTTATTGCTCCCCAAATACGGTTGGGCATCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAAAGGAAGTCAGTGGAATaGTGGGCCAGGTGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: PLLLSVEVGLPQENEPKERKSVE*WARCRA
Trigger: GGCCCTGCACCTGGCCCACAATTCCACTGACTTCCT...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR TCA 72 bp CCTTCTTTAGAAATCAAAGAGAAGGCAGGTGGTTGGTaGTGGGTGGCATCAAGGCTCAGTCCTGGGGACTGG +
Preference number: 3 (lower is better)
Translates to: PSLEIKEKAGGW*WVASRLSPGDW
Trigger: CCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTGCCTTCTCTTTGATTTCTAAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CCA 72 bp AGATGGCTGTGTGCCCTTAGGCTGGAGAGTGAGCTGTaGCTTCCTGGAGTCGACATTAAACGAACGGCATTA +
Preference number: 3 (lower is better)
Translates to: RWLCALRLESEL*LPGVDIKRTAL
Trigger: TAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTCCAGCCTAAGGGCACACAGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTTTTACTGCAGGTGGCTaGAGGCTTCCAGGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIFTAGG*RLPGAS
Trigger: AGAAGCACCTGGAAGCCTCAAGCCACCTGCAGTAAA...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTAGGGGACTATTGCTGTaGTCCTTGGCATGGCTGACA +
Preference number: 3 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIRGLLL*SLAWLT
Trigger: TGTCAGCCATGCCAAGGACAACAGCAATAGTCCCCT...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR CCA 72 bp GAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTaGACTGGACCCATTGGAGCCGCTACCAAATGGGAA +
Preference number: 3 (lower is better)
Translates to: EVGQLRTGVNKK*TGPIGAATKWE
Trigger: TTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp ACAGCATGGGGTGGGGACAGGACACAGTTTACACAATaGTCGGGAGAAACAAGACAGTACAAGGACAGATGG +
Preference number: 3 (lower is better)
Translates to: TAWGGDRTQFTQ*SGETRQYKDRW
Trigger: CCATCTGTCCTTGTACTGTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGAGTGAGGTTGGACAGTaGAGAACTGGAGTCAACAAG +
Preference number: 3 (lower is better)
Translates to: WPFSPACVKISHTGLLCVSEVGQ*RTGVNK
Trigger: CTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR CCA 72 bp CAGCAGAGACTGGATTTTCATGCATGTCAACATGTCTaGAGCCAGGAGATGGTAACGGGTCTCCACTCTCAA +
Preference number: 3 (lower is better)
Translates to: QQRLDFHACQHV*SQEMVTGLHSQ
Trigger: TTGAGAGTGGAGACCCGTTACCATCTCCTGGCTCCAGACATGTTGACATGCATGAAAATCCAGTCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
3UTR TCA 72 bp TACAGAACGCTGGAAACAACACAAAGCTACACCTTATaGGAAGACCCTGAAGGTCTCACCCCTCCAGACAGT +
Preference number: 3 (lower is better)
Translates to: YRTLETTQSYTL*EDPEGLTPPDS
Trigger: ACTGTCTGGAGGGGTGAGACCTTCAGGGTCTTCTCATAAGGTGTAGCTTTGTGTTGTTTCCAGCGTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
3UTR-3UTR CAA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAGTTGGGCCCAGCCACTaGGCCCTGCATCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: GILVHKIITALYRTLETTVGPSH*ALHLSL
Trigger: CAGACTCAGATGCAGGGCCAAGTGGCTGGGCCCAAC...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCTGGGCCCACTGGGCTaGGCCGAGATGGTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLLGPLG*AEMVRS
Trigger: GCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGATCGTGCCGATGGCTaGGCCCACTGGGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLDRADG*AHWAGP
Trigger: CGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGGGCCAGCAGGGGCTGTaGCAGGTGACGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWGQQGL*QVTRGL
Trigger: CAGCCCCCTCGTCACCTGGCACAGCCCCTGCTGGCC...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCATCCGCCAGCAGTGTaGAGCAGCCGTCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLHPPAV*SSRPPA
Trigger: CGCTGGGGGACGGCTGCTCCACACTGCTGGCGGATG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGGATCGTGCCGATGGCTaGGCCCACTGGGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWDRADG*AHWAGP
Trigger: CGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATC...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGCTCCAGGCGGGAGGCTaGGGGGTCCGCGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILLQAGG*GVRGVE
Trigger: TTCCACCCCGCGGACCCCTCAGCCTCCCGCCTGGAG...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGGCCGAAGCTGCCCTTaGGCAAAGCCATGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLGRSCP*AKPCAW
Trigger: CCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGGCCCCAGCAGCTGGCTaGCACGCTCATGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWAPAAG*HAHAAL
Trigger: CAGCGCAGCATGAGCGTGGCAGCCAGCTGCTGGGGC...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGGCTGGAGCCTCCGCTaGCGCCACCGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTGWSLR*RHRHCH
Trigger: GTGGCAGTGGCGGTGGCGGCAGCGGAGGCTCCAGCC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGGGCCAGCAGGGGCTGTaGCAGGTGACGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWGQQGL*QVTRGL
Trigger: CAGCCCCCTCGTCACCTGGCACAGCCCCTGCTGGCC...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGCCTTGCGCAAAGCCATaGGCGTGGCCGTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWPCAKP*AWPCSG
Trigger: CCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGG...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGTCTGTGTCCGATCGTaGCGATGGCTGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLVCVRS*RWLGPL
Trigger: CAGTGGGCCCAGCCATCGGCACGATCGGACACAGAC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGAGCCTTGTGGCGCAGTaGGTCGTGCACCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLSLVAQ*VVHQAI
Trigger: GATGGCCTGGTGCACGACCCACTGCGCCACAAGGCT...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCGCTTGGAGGACCTTaGGGACTTGGAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLPLGGP*GLGGGG
Trigger: TCCACCTCCTCCAAGTCCTCAAGGTCCTCCAAGCGG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGTGGGCTGTGAAGGCGTaGACACGGACACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLWAVKA*TRTPPC
Trigger: GCAAGGAGGTGTCCGTGTTCACGCCTTCACAGCCCA...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGGGGGATGTCAATGTTaGTGCGGCTCAGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLGGCQC*CGSGAD
Trigger: GTCGGCACCTGAGCCGCAGCAACATTGACATCCCCC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGGCCAGCAGGGGCTGTaGCAGGTGACGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTGQQGL*QVTRGL
Trigger: CAGCCCCCTCGTCACCTGGCACAGCCCCTGCTGGCC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGGCCCCAGCAGCTGGCTaGCACGCTCATGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWAPAAG*HAHAAL
Trigger: CAGCGCAGCATGAGCGTGGCAGCCAGCTGCTGGGGC...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGCTGCTGCAGCTTCTTaGTGGGGCGGCCCACAATGT +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLAAAAS*WGGPQC
Trigger: ACATTGTGGGCCGCCCCACCAAGAAGCTGCAGCAGC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCGGCAAGTCTTGACTaGCTGGAACAGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLPASLD*LEQLGV
Trigger: GACCCCAAGCTGTTCCAGTCAGTCAAGACTTGCCGG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGGCAGACCTGACCATTaGAGGTCACACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLGRPDH*RSHLPG
Trigger: CCCAGGAAGGTGTGACCTTCAATGGTCAGGTCTGCC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTACAGCGTCCTGCATGCTaGCCACACTGCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLQRPAC*PHCLGG
Trigger: GCCGCCGAGGCAGTGTGGTCAGCATGCAGGACGCTG...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTCCAGGCGGGAGGCTaGGGGGTCCGCGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGLQAGG*GVRGVE
Trigger: TTCCACCCCGCGGACCCCTCAGCCTCCCGCCTGGAG...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTAGGGGCTGTGCCAGGTaGCGAGGGGGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVARGCAR*RGGCML
Trigger: GAGCATGCAGCCCCCTCGTCACCTGGCACAGCCCCT...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGCTGCATTCGCCAGGGTaGCCGGGGACAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILLHSPG*PGTAGQ
Trigger: CTGACCTGCTGTCCCCGGGCACCCTGGCGAATGCAG...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGCCTTGCGCAAAGCCATaGGCGTGGCCGTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILPCAKP*AWPCSG
Trigger: CCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGG...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCCCCCTGCTTGGAGCTaGGGTCCCCCGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRPPAWS*GPPLQC
Trigger: ACACTGGAGCGGGGGACCCCAGCTCCAAGCAGGGGG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGCATCCGCCAGCAGTGTaGAGCAGCCGTCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLHPPAV*SSRPPA
Trigger: CGCTGGGGGACGGCTGCTCCACACTGCTGGCGGATG...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGTTCCGCAGCTTCACGTaGGTCCTCTTGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWFRSFT*VLLRCH
Trigger: GTGGCAGCGCAAGAGGACCCACGTGAAGCTGCGGAA...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGGCGTCATTGATCCGGTaGTTGGCTGCCACGTTCCGC +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWASLIR*LAATFR
Trigger: GCGGAACGTGGCAGCCAACCACCGGATCAATGACGC...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCGTCCGTGATGAACTaGCACTGCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLPSVMN*HCCCSF
Trigger: GAAGCTGCAGCAGCAGTGCCAGTTCATCACGGACGG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGATGGCTGGGCCCACTaGGCTGGGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTDGWAH*AGPRWC
Trigger: GCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGATGGCTGGGCCCACTaGGCTGGGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLDGWAH*AGPRWC
Trigger: GCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATC...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAGATGGCTGGGCCCACTaGGCTGGGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASDGWAH*AGPRWC
Trigger: GCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATC...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGGTCCCCGGCAAGTCTTaGCTGACTGGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWVPGKS*LTGTAW
Trigger: CCAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGAC...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGCGCTGGAGGCCACCCTaGACTCAGAGCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILRWRPP*TQSHSA
Trigger: AGCAGAGTGGCTCTGAGTTCAGGGTGGCCTCCAGCG...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCCCCGGTGATTGTACTTaGGCTGGGCCAGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVPGDCT*AGPGGP
Trigger: CGGCCCACCTGGCCCAGCTCAAGTACAATCACCGGG...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGTGCCTCGGCGGCTACTaGTTTGACTCTCAGACACTG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLCLGGY*FDSQTL
Trigger: CAGTGTCTGAGAGTCAAAGCAGTAGCCGCCGAGGCA...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCTCAGGTGCCGACTaGTCTCCAGGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAGSGAD*SPGWSL
Trigger: GAGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCC...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAGGCTCAGGTGCCGACTaGTCTCCAGGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASGSGAD*SPGWSL
Trigger: GAGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCC...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGGCTGGGCCGAGATGGTaGGGAGCAGGTGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILAGPRW*GAGDSE
Trigger: CTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGC...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACCTGCCACGCTCATGCTaGGCTGGCCCCGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHLPRSC*AGPAAR
Trigger: GCGAGCAGCGGGGCCAGCGCAGCATGAGCGTGGCAG...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGCCCCAGCAGCTGGCTaGCACGCTCATGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSAPAAG*HAHAAL
Trigger: CAGCGCAGCATGAGCGTGGCAGCCAGCTGCTGGGGC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAGGGGCTCACCTGCCTTaGCCTGGCACGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPGAHLP*PGTGTL
Trigger: CAGGGTCCCCGTGCCAGGGCAAGGCAGGTGAGCCCC...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS-3UTR CCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTAGGGCACCAGGCGGATaGCTAGGTGGCCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVARAPGG*LGGLGH
Trigger: GTGCCCTAGGCCACCTAGCCATCCGCCTGGTGCCCT...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGGGGGCAGCTGCCTTCTaGAGTCCTCAGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWGAAAF*SPQCRC
Trigger: GCAACGGCACTGAGGACTCCAGAAGGCAGCTGCCCC...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGTCTGTCCCCACCACTTaGCAGCAATCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWSVPTT*QQSGRC
Trigger: GCATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGA...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCACAAGCCGGCCTGCCATaGCTCGGCCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPQAGLP*LGPSSW
Trigger: CCAGCTGCTGGGGCCGAGCCATGGCAGGCCGGCTTG...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGCCGCTTGGAGGACCTTaGGGACTTGGAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWPLGGP*GLGGGG
Trigger: TCCACCTCCTCCAAGTCCTCAAGGTCCTCCAAGCGG...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACACGCTGGAGGCCACCCTaGACTCAGAGCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTRWRPP*TQSHSA
Trigger: AGCAGAGTGGCTCTGAGTTCAGGGTGGCCTCCAGCG...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCACAGCGTCCTGCATGCTaGCCACACTGCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSQRPAC*PHCLGG
Trigger: GCCGCCGAGGCAGTGTGGTCAGCATGCAGGACGCTG...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGCTCCAGGCGGGAGGCTaGGGGGTCCGCGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLELQAGG*GVRGVE
Trigger: TTCCACCCCGCGGACCCCTCAGCCTCCCGCCTGGAG...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCGGTACCGAGGGATGCTaGAAGGCGGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVGTEGC*KAAGCG
Trigger: TCCACAGCCTGCCGCCTTTCAGCATCCCTCGGTACC...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGGCTCTCGGCCATGCCTaGCACCTGACTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILALGHA*HLTGDT
Trigger: AGTATCGCCAGTCAGGTGTCAGGCATGGCCGAGAGC...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGGCATGGGAGAGAGGCTaGTGGAGTTATAGACTGCGA +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLAWERG*WSYRLR
Trigger: TCGCAGTCTATAACTCCATCAGCCTCTCTCCCATGC...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGTCTACCCCGCTGCCTTaGCCGTGGGTCTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLSTPLP*PWVSFR
Trigger: CCGGAATGAGACCCACGGGCAAGGCAGCGGGGTAGA...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGGGATCTCTACCCCGCTaGCTTGCCCGTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWGSLPR*LARGSH
Trigger: ATGAGACCCACGGGCAAGGCAGCGGGGTAGAGATCC...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGTCCCTGGCGATACTCTaGATCCTCCACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLSLAIL*ILHSEM
Trigger: CATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGA...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGAGGATGGTGCCTCCATaGAGCACCAGCAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWRMVPP*STSSST
Trigger: CGTGCTGCTGCTGGTGCTGCATGGAGGCACCATCCT...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGGGCTGGAGCCTCCGCTaGCGCCACCGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLEGWSLR*RHRHCH
Trigger: GTGGCAGTGGCGGTGGCGGCAGCGGAGGCTCCAGCC...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCATTGCTGCGGCTCAGGTaGCGACTGCTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASLLRLR*RLLSRL
Trigger: CAGCCTGGAGAGCAGTCGGCACCTGAGCCGCAGCAA...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGTTGCTGCGGCTCAGGTaGCGACTGCTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLLLRLR*RLLSRL
Trigger: CAGCCTGGAGAGCAGTCGGCACCTGAGCCGCAGCAA...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGCAGGTAGGCCGAAGCTaGCCTTGCGCAAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILQVGRS*PCAKPC
Trigger: GCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTG...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCGCTGGGCCGAGATGGTaGGGAGCAGGTGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVAGPRW*GAGDSE
Trigger: CTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGC...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGCCCCAGCAGCTGGCTaGCACGCTCATGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSAPAAG*HAHAAL
Trigger: CAGCGCAGCATGAGCGTGGCAGCCAGCTGCTGGGGC...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCATGGCGGGGCCCATCCTaGCAGGTGAGCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPWRGPS*QVSAGT
Trigger: TGTTCCCGCGCTCACCTGGCAGGATGGGCCCCGCCA...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS-3UTR CCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACGACTGCTCTCCAGGCTaGAGCCTCCGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHDCSPG*SLRCRH
Trigger: GTGGCGGCAGCGGAGGCTCCAGCCTGGAGAGCAGTC...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAGGGGCAGCTGCCTTCTaGAGTCCTCAGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLGAAAF*SPQCRC
Trigger: GCAACGGCACTGAGGACTCCAGAAGGCAGCTGCCCC...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGCGCTGGCGTGGAGGCTaGATAGGAAGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLRWRGG*IGRPGA
Trigger: AGCACCAGGCCTTCCTATCCAGCCTCCACGCCAGCG...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCCGCTGGCGTGGAGGCTaGATAGGAAGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVRWRGG*IGRPGA
Trigger: AGCACCAGGCCTTCCTATCCAGCCTCCACGCCAGCG...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACTCAGCACGCTGGCGTaGAGGCTGGATAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASLSTLA*RLDRKA
Trigger: GGCCTTCCTATCCAGCCTCCACGCCAGCGTGCTGAG...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTACTCAGCACGCTGGCGTaGAGGCTGGATAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLLSTLA*RLDRKA
Trigger: GGCCTTCCTATCCAGCCTCCACGCCAGCGTGCTGAG...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGAAAGGCGGCAGGCTGTaGAAACGCCGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLKGGRL*KRRSSS
Trigger: GCTGCTGGAGCGGCGTTTCCACAGCCTGCCGCCTTT...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAAAAGGCGGCAGGCTGTaGAAACGCCGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTKGGRL*KRRSSS
Trigger: GCTGCTGGAGCGGCGTTTCCACAGCCTGCCGCCTTT...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAAAAGGCGGCAGGCTGTaGAAACGCCGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLKGGRL*KRRSSS
Trigger: GCTGCTGGAGCGGCGTTTCCACAGCCTGCCGCCTTT...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTAGCCTTGTGGCGCAGTaGGTCGTGCACCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVASLVAQ*VVHQAI
Trigger: GATGGCCTGGTGCACGACCCACTGCGCCACAAGGCT...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCTGGGCCCACTGGGCTaGGCCGAGATGGTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTELGPLG*AEMVRS
Trigger: GCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGATCGTGCCGATGGCTaGGCCCACTGGGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVDRADG*AHWAGP
Trigger: CGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATC...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACGGCGGCTACTGCTTTaGCTCTCAGACACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASRRLLL*LSDTGW
Trigger: CCAGCCAGTGTCTGAGAGTCAAAGCAGTAGCCGCCG...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGAGGGGCTGTGCCAGGTaGCGAGGGGGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTERGCAR*RGGCML
Trigger: GAGCATGCAGCCCCCTCGTCACCTGGCACAGCCCCT...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGCTAAGGGCCCATACATaGACCGGCCCGTCACAACCT +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILLRAHT*TGPSQP
Trigger: AGGTTGTGACGGGCCGGTTCATGTATGGGCCCTTAG...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTCCCTGGGGAGCACAGTaGTGTAGCTGTCGGCGAATG +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAPWGAQ*CSCRRM
Trigger: CATTCGCCGACAGCTACATCACTGTGCTCCCCAGGG...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAGCATGTGCGCGCAGGTaGAGCTCAGAGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASACARR*SSEMSS
Trigger: GCTGCTCATCTCTGAGCTTCACCTGCGCGCACATGC...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACCCCGGTGATTGTACTTaGGCTGGGCCAGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHPGDCT*AGPGGP
Trigger: CGGCCCACCTGGCCCAGCTCAAGTACAATCACCGGG...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTCTACCCCGCTGCCTTaGCCGTGGGTCTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGSTPLP*PWVSFR
Trigger: CCGGAATGAGACCCACGGGCAAGGCAGCGGGGTAGA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGGATCTCTACCCCGCTaGCTTGCCCGTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTGSLPR*LARGSH
Trigger: ATGAGACCCACGGGCAAGGCAGCGGGGTAGAGATCC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCACCACCCGCAAGGCTaGTTTGGGCAAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRHHPQG*FGQDGA
Trigger: CGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACACACCACCCGCAAGGCTaGTTTGGGCAAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTHHPQG*FGQDGA
Trigger: CGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTG...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGCACCACCCGCAAGGCTaGTTTGGGCAAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLHHPQG*FGQDGA
Trigger: CGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTG...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGGGGGATGTCAATGTTaGTGCGGCTCAGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLGGCQC*CGSGAD
Trigger: GTCGGCACCTGAGCCGCAGCAACATTGACATCCCCC...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAGGGGGATGTCAATGTTaGTGCGGCTCAGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASGGCQC*CGSGAD
Trigger: GTCGGCACCTGAGCCGCAGCAACATTGACATCCCCC...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGAACTGGCACTGCTGCTaGAGCTTCTTGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLNWHCC*SFLVGR
Trigger: CCGCCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTT...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCAACTGGCACTGCTGCTaGAGCTTCTTGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVNWHCC*SFLVGR
Trigger: CCGCCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTT...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGGTGATGAACTGGCACTaGTGCTGCAGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWVMNWH*CCSFLV
Trigger: CACCAAGAAGCTGCAGCAGCAGTGCCAGTTCATCAC...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGATGCCTGGTCCTTGGTaGCACTGTCCTTGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLMPGPW*HCPCLV
Trigger: AACTAAGCAAGGACAGTGCCACCAAGGACCAGGCAT...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGAGGGCACCAGGCGGATaGCTAGGTGGCCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGRAPGG*LGGLGH
Trigger: GTGCCCTAGGCCACCTAGCCATCCGCCTGGTGCCCT...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGAGGGGGATGTGGTCCTaGCTGCTAGACAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRRGMWS*LLDRQP
Trigger: GGGCTGTCTGTCTAGCAGCCAGGACCACATCCCCCT...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGACTGCTCTCCAGGCTaGAGCCTCCGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVDCSPG*SLRCRH
Trigger: GTGGCGGCAGCGGAGGCTCCAGCCTGGAGAGCAGTC...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGGAGGGGTCCGCGGGGTaGAAGAGGTTGTACACTTGC +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLEGSAG*KRLYTC
Trigger: GCAAGTGTACAACCTCTTCCACCCCGCGGACCCCTC...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCGAGGGGTCCGCGGGGTaGAAGAGGTTGTACACTTGC +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVEGSAG*KRLYTC
Trigger: GCAAGTGTACAACCTCTTCCACCCCGCGGACCCCTC...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGGCGTCATTGATCCGGTaGTTGGCTGCCACGTTCCGC +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRASLIR*LAATFR
Trigger: GCGGAACGTGGCAGCCAACCACCGGATCAATGACGC...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCGTCATTGATCCGGTaGTTGGCTGCCACGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLASLIR*LAATFR
Trigger: GCGGAACGTGGCAGCCAACCACCGGATCAATGACGC...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCGCTGCTGCAGCTTCTTaGTGGGGCGGCCCACAATGT +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVAAAAS*WGGPQC
Trigger: ACATTGTGGGCCGCCCCACCAAGAAGCTGCAGCAGC...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGCTGCTGCAGCTTCTTaGTGGGGCGGCCCACAATGT +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTAAAAS*WGGPQC
Trigger: ACATTGTGGGCCGCCCCACCAAGAAGCTGCAGCAGC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCTGGGCTGGGCCGAGATaGTGCGGAGCAGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSWAGPR*CGAGDS
Trigger: GGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCA...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGCCGGCAAGTCTTGACTaGCTGGAACAGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLPASLD*LEQLGV
Trigger: GACCCCAAGCTGTTCCAGTCAGTCAAGACTTGCCGG...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGTCCCCGGCAAGTCTTaGCTGACTGGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTVPGKS*LTGTAW
Trigger: CCAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGAC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACTGCATCCTCCACTCTaGGATGCTATGTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASLHPPL*DAMSGG
Trigger: CCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAG...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCTGCATCCTCCACTCTaGGATGCTATGTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRLHPPL*DAMSGG
Trigger: CCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGTCACCTCATCCTCGATaGTGTTCAGCTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWSPHPR*CSAAPR
Trigger: GCGTGGAGCAGCTGAACATCATCGAGGATGAGGTGA...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACACCAGCAGCAGCACGTaGATCTTGGAGGGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHTSSST*ILEGGA
Trigger: CGCGCCACCCTCCAAGATTCACGTGCTGCTGCTGGT...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTCAGCGTCCTGCATGCTaGCCACACTGCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGQRPAC*PHCLGG
Trigger: GCCGCCGAGGCAGTGTGGTCAGCATGCAGGACGCTG...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACGGTACCGAGGGATGCTaGAAGGCGGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHGTEGC*KAAGCG
Trigger: TCCACAGCCTGCCGCCTTTCAGCATCCCTCGGTACC...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTAGGGGCTGTGCCAGGTaGCGAGGGGGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGRGCAR*RGGCML
Trigger: GAGCATGCAGCCCCCTCGTCACCTGGCACAGCCCCT...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTCCTGACTGGCGATACTaGTCTCACTGGCTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAPDWRY*SHWLCG
Trigger: TCCGCAGAGCCAGTGAGATCAGTATCGCCAGTCAGG...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTACCTGACTGGCGATACTaGTCTCACTGGCTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLPDWRY*SHWLCG
Trigger: TCCGCAGAGCCAGTGAGATCAGTATCGCCAGTCAGG...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGCCTGACTGGCGATACTaGTCTCACTGGCTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLPDWRY*SHWLCG
Trigger: TCCGCAGAGCCAGTGAGATCAGTATCGCCAGTCAGG...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGCTCTCGGCCATGCCTaGCACCTGACTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSALGHA*HLTGDT
Trigger: AGTATCGCCAGTCAGGTGTCAGGCATGGCCGAGAGC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCTAAGGGCCCATACATaGACCGGCCCGTCACAACCT +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRLRAHT*TGPSQP
Trigger: AGGTTGTGACGGGCCGGTTCATGTATGGGCCCTTAG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGAAGGTGGTTGCGTCATaGTGTGCACATCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLKVVAS*CAHPPF
Trigger: AAAAGGTGGATGTGCACATCATGACGCAACCACCTT...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCCCCTGGGGAGCACAGTaGTGTAGCTGTCGGCGAATG +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSPWGAQ*CSCRRM
Trigger: CATTCGCCGACAGCTACATCACTGTGCTCCCCAGGG...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCCCGGTGATTGTACTTaGGCTGGGCCAGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEPGDCT*AGPGGP
Trigger: CGGCCCACCTGGCCCAGCTCAAGTACAATCACCGGG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCATCTACCCCGCTGCCTTaGCCGTGGGTCTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSSTPLP*PWVSFR
Trigger: CCGGAATGAGACCCACGGGCAAGGCAGCGGGGTAGA...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGCAATCTTGGACTGCATaGCCCAGTATCGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWQSWTA*PSIGTP
Trigger: TGGAGTTCCGATACTGGGGCATGCAGTCCAAGATTG...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTTCCTCCACTCTGAGATaGTATGTCGGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVASSTLR*YVGRGW
Trigger: CCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGA...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCATCGATGATGTTCAGCTaGTCCACGCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASSMMFS*STLEAT
Trigger: GGTGGCCTCCAGCGTGGAGCAGCTGAACATCATCGA...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGGCTGGAGCCTCCGCTaGCGCCACCGCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDGWSLR*RHRHCH
Trigger: GTGGCAGTGGCGGTGGCGGCAGCGGAGGCTCCAGCC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTTGCTGCGGCTCAGGTaGCGACTGCTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHLLRLR*RLLSRL
Trigger: CAGCCTGGAGAGCAGTCGGCACCTGAGCCGCAGCAA...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGGATGTCAATGTTGCTaGGGCTCAGGTGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLGCQCC*GSGADC
Trigger: GCAGTCGGCACCTGAGCCGCAGCAACATTGACATCC...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACTTTTGCGGGGCAGCTaGCTTCTGGAGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASLLRGS*LLESSV
Trigger: CACTGAGGACTCCAGAAGGCAGCTGCCCCGCAAAAG...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACATGTAGCTCTCGGCCATaGCTGACACCTGACTGGCGA +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTCSSRP*LTPDWR
Trigger: TCGCCAGTCAGGTGTCAGGCATGGCCGAGAGCTACA...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGTGTAGCTCTCGGCCATaGCTGACACCTGACTGGCGA +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLCSSRP*LTPDWR
Trigger: TCGCCAGTCAGGTGTCAGGCATGGCCGAGAGCTACA...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGCAGGTAGGCCGAAGCTaGCCTTGCGCAAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGQVGRS*PCAKPC
Trigger: GCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTG...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACCCGCTGCCTTGCCCGTaGGTCTCATTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHPLPCP*VSFRLF
Trigger: GAAGAGCCGGAATGAGACCCACGGGCAAGGCAGCGG...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCCGCTGCCTTGCCCGTaGGTCTCATTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGPLPCP*VSFRLF
Trigger: GAAGAGCCGGAATGAGACCCACGGGCAAGGCAGCGG...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCTTCGTCGGAGTCCCTaGCGATACTCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRLRRSP*RYSASS
Trigger: GGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCCCCCCTGCTTGGAGCTaGGGTCCCCCGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFPPAWS*GPPLQC
Trigger: ACACTGGAGCGGGGGACCCCAGCTCCAAGCAGGGGG...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGAAGGTCACACCTTCCTaGGACTTGATGAAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWKVTPS*DLMKSP
Trigger: CGGAGACTTCATCAAGTCCCAGGAAGGTGTGACCTT...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCGACTGCTCTCCAGGCTaGAGCCTCCGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFDCSPG*SLRCRH
Trigger: GTGGCGGCAGCGGAGGCTCCAGCCTGGAGAGCAGTC...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGTGTCCAGCTCATAGGTaGACGAGTCACTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWCPAHR*TSHSFC
Trigger: GCAAAAGGAGTGACTCGTCCACCTATGAGCTGGACA...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACACCTGGTGCTGCTGGATaGTGTCCAGCTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTPGAAG*CPAHRW
Trigger: CCACCTATGAGCTGGACACCATCCAGCAGCACCAGG...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACCTGGTGCTGCTGGATaGTGTCCAGCTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASPGAAG*CPAHRW
Trigger: CCACCTATGAGCTGGACACCATCCAGCAGCACCAGG...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCACGCTGGCGTGGAGGCTaGATAGGAAGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPRWRGG*IGRPGA
Trigger: AGCACCAGGCCTTCCTATCCAGCCTCCACGCCAGCG...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTTGAGCGGCGGGAGCTaGGCTCATTCCTCAGCACGC +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHLSGGS*AHSSAR
Trigger: GCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAA...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGAGGGGTCCGCGGGGTaGAAGAGGTTGTACACTTGC +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSEGSAG*KRLYTC
Trigger: GCAAGTGTACAACCTCTTCCACCCCGCGGACCCCTC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTCTCGGCCCCAGCAGCTaGCTGCCACGCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGLGPSS*LPRSCC
Trigger: GCAGCATGAGCGTGGCAGCCAGCTGCTGGGGCCGAG...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCACAGGAGACAGGTTaGACACATTATTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLPQETG*THYCFP
Trigger: GGGAAAACAATAATGTGTTCAACCTGTCTCCTGTGG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTTTTGCGGGACAGCATaGGCTGCACCTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGFCGTA*AAPPSP
Trigger: TGGAGAGGGAGGTGCAGCTCATGCTGTCCCGCAAAA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAGGTAGTGCACGCGCATaGCGGTGTCGAACACGTTGG +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPGSARA*RCRTRW
Trigger: CCAACGTGTTCGACACCGTCATGCGCGTGCACTACC...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGGGTAGTGCACGCGCATaGCGGTGTCGAACACGTTGG +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGGSARA*RCRTRW
Trigger: CCAACGTGTTCGACACCGTCATGCGCGTGCACTACC...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGGTAGTGCACGCGCATaGCGGTGTCGAACACGTTGG +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSGSARA*RCRTRW
Trigger: CCAACGTGTTCGACACCGTCATGCGCGTGCACTACC...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCGGCGGCTACTGCTTTaGCTCTCAGACACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGRRLLL*LSDTGW
Trigger: CCAGCCAGTGTCTGAGAGTCAAAGCAGTAGCCGCCG...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGACTGTGTTGTGGGTCTaGAGCACATCCGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRTVLWV*STSASS
Trigger: ACTGCTGGCGGATGTGCTTCAGACCCACAACACAGT...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGGCCATGCCTGACACCTaGCTGGCGATACTGATCTCA +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRAMPDT*LAILIS
Trigger: TGAGATCAGTATCGCCAGTCAGGTGTCAGGCATGGC...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGCTAAGGGCCCATACATaGACCGGCCCGTCACAACCT +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGLRAHT*TGPSQP
Trigger: AGGTTGTGACGGGCCGGTTCATGTATGGGCCCTTAG...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCTTTCCCCAGTCAGGGTaGCCATGTCTAAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVFPQSG*PCLRAH
Trigger: ATGGGCCCTTAGACATGGTCACCCTGACTGGGGAAA...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTATTTCCCCAGTCAGGGTaGCCATGTCTAAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLFPQSG*PCLRAH
Trigger: ATGGGCCCTTAGACATGGTCACCCTGACTGGGGAAA...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCATTTCCCCAGTCAGGGTaGCCATGTCTAAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASFPQSG*PCLRAH
Trigger: ATGGGCCCTTAGACATGGTCACCCTGACTGGGGAAA...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGAAGGTGGTTGCGTCATaGTGTGCACATCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWKVVAS*CAHPPF
Trigger: AAAAGGTGGATGTGCACATCATGACGCAACCACCTT...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGCATGTGCGCGCAGGTaGAGCTCAGAGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSACARR*SSEMSS
Trigger: GCTGCTCATCTCTGAGCTTCACCTGCGCGCACATGC...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGGGATCTCTACCCCGCTaGCTTGCCCGTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGGSLPR*LARGSH
Trigger: ATGAGACCCACGGGCAAGGCAGCGGGGTAGAGATCC...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTCCTCCACTCTGAGATaGTATGTCGGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGSSTLR*YVGRGW
Trigger: CCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCTCGATGATGTTCAGCTaGTCCACGCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSSMMFS*STLEAT
Trigger: GGTGGCCTCCAGCGTGGAGCAGCTGAACATCATCGA...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGAGGATGGTGCCTCCATaGAGCACCAGCAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGRMVPP*STSSST
Trigger: CGTGCTGCTGCTGGTGCTGCATGGAGGCACCATCCT...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGGGGGATGTCAATGTTaGTGCGGCTCAGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSGGCQC*CGSGAD
Trigger: GTCGGCACCTGAGCCGCAGCAACATTGACATCCCCC...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGGGCCAGCAGGGGCTGTaGCAGGTGACGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRGQQGL*QVTRGL
Trigger: CAGCCCCCTCGTCACCTGGCACAGCCCCTGCTGGCC...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCATCACGTGGGTCCTCTTaGGCTGCCACCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPSRGSS*AATFPW
Trigger: CCAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGA...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCATCACGTGGGTCCTCTTaGGCTGCCACCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSSRGSS*AATFPW
Trigger: CCAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGA...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTATGAACTGGCACTGCTaGTGCAGCTTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAMNWHC*CSFLVG
Trigger: CCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTTCAT...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGATGAACTGGCACTGCTaGTGCAGCTTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARMNWHC*CSFLVG
Trigger: CCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTTCAT...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGGTGATGAACTGGCACTaGTGCTGCAGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILVMNWH*CCSFLV
Trigger: CACCAAGAAGCTGCAGCAGCAGTGCCAGTTCATCAC...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGCCTTGCGCAAAGCCATaGGCGTGGCCGTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLPCAKP*AWPCSG
Trigger: CCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGG...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGGCTGGGCCGAGATGGTaGGGAGCAGGTGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEAGPRW*GAGDSE
Trigger: CTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGC...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGTCTGTGTCCGATCGTaGCGATGGCTGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVVCVRS*RWLGPL
Trigger: CAGTGGGCCCAGCCATCGGCACGATCGGACACAGAC...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCTGCCACGCTCATGCTaGGCTGGCCCCGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCLPRSC*AGPAAR
Trigger: GCGAGCAGCGGGGCCAGCGCAGCATGAGCGTGGCAG...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCGTTGTTCCAGATGCCTaGTCCTTGGTGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVVVPDA*SLVALS
Trigger: GGACAGTGCCACCAAGGACCAGGCATCTGGAACAAC...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGGTTGTTCCAGATGCCTaGTCCTTGGTGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLVVPDA*SLVALS
Trigger: GGACAGTGCCACCAAGGACCAGGCATCTGGAACAAC...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAAGGACCTTGAGGACTTaGAGGAGGTGGACCACTGCT +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASRTLRT*RRWTTA
Trigger: AGCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCT...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCGTAGCAACTGCCTCCTaGTACTGGGGTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVVATAS*YWGEEV
Trigger: CACTTCCTCACCCCAGTACCAGGAGGCAGTTGCTAC...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGGTAGCAACTGCCTCCTaGTACTGGGGTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRVATAS*YWGEEV
Trigger: CACTTCCTCACCCCAGTACCAGGAGGCAGTTGCTAC...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAGACTGCTCTCCAGGCTaGAGCCTCCGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTDCSPG*SLRCRH
Trigger: GTGGCGGCAGCGGAGGCTCCAGCCTGGAGAGCAGTC...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGGGGGCAGCTGCCTTCTaGAGTCCTCAGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEGAAAF*SPQCRC
Trigger: GCAACGGCACTGAGGACTCCAGAAGGCAGCTGCCCC...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTATTGAGCGGCGGGAGCTaGGCTCATTCCTCAGCACGC +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVLSGGS*AHSSAR
Trigger: GCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAA...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCACTTGCTGACACGCTaGACGCAGCTGGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRHLLTR*TQLENV
Trigger: GACGTTTTCCAGCTGCGTCCAGCGTGTCAGCAAGTG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGCACTTGCTGACACGCTaGACGCAGCTGGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLHLLTR*TQLENV
Trigger: GACGTTTTCCAGCTGCGTCCAGCGTGTCAGCAAGTG...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGGGCTGCATGCTCTTaGAAGACTGTGTTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAGAACS*KTVLWV
Trigger: GACCCACAACACAGTCTTCCAAGAGCATGCAGCCCC...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGGGGGCTGCATGCTCTTaGAAGACTGTGTTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARGAACS*KTVLWV
Trigger: GACCCACAACACAGTCTTCCAAGAGCATGCAGCCCC...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACCTGGGCCCACTGGGCTaGGCCGAGATGGTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDLGPLG*AEMVRS
Trigger: GCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAG...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGCAAGCCGGCCTGCCATaGCTCGGCCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRQAGLP*LGPSSW
Trigger: CCAGCTGCTGGGGCCGAGCCATGGCAGGCCGGCTTG...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCCTCCAGGACCAGCTCTaGGTTTCTCTGCACGGTCTC +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSLQDQL*VSLHGL
Trigger: GAGACCGTGCAGAGAAACCCAGAGCTGGTCCTGGAG...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS-3UTR CCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGGGCCCGCTCCAGGTTaGGGCTCACCTGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKGPAPG*GSPALP
Trigger: GGGCAAGGCAGGTGAGCCCCAACCTGGAGCGGGCCC...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS-3UTR CCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGTCTGTCCCCACCACTTaGCAGCAACTTCTCCGATGT +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILSVPTT*QQLLRC
Trigger: ACATCGGAGAAGTTGCTGCCAAGTGGTGGGGACAGA...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS-3UTR TCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAGTCCCCGGCAAGTCTTaGCTGACTGGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPVPGKS*LTGTAW
Trigger: CCAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGAC...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCATTTTGCGGGACAGCATaGGCTGCACCTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSFCGTA*AAPPSP
Trigger: TGGAGAGGGAGGTGCAGCTCATGCTGTCCCGCAAAA...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTCACCTCATCCTCGATaGTGTTCAGCTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGSPHPR*CSAAPR
Trigger: GCGTGGAGCAGCTGAACATCATCGAGGATGAGGTGA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGACCAGCAGCAGCACGTaGATCTTGGAGGGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLTSSST*ILEGGA
Trigger: CGCGCCACCCTCCAAGATTCACGTGCTGCTGCTGGT...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACGGCAGACCTGACCATTaGAGGTCACACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHGRPDH*RSHLPG
Trigger: CCCAGGAAGGTGTGACCTTCAATGGTCAGGTCTGCC...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCCGTCCAGGGAAGGGATaGCTGTTTTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVRPGKG*LFSSRL
Trigger: TAGCCTTGAGGAAAACAGTCATCCCTTCCCTGGACG...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTACCCTGGGGAGCACAGTaGTGTAGCTGTCGGCGAATG +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVPWGAQ*CSCRRM
Trigger: CATTCGCCGACAGCTACATCACTGTGCTCCCCAGGG...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGATCGGAACTCCACCTTaGAGAGCTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLIGTPP*RACRRT
Trigger: TGTGCGCCTACAAGCTCTGCAAGGTGGAGTTCCGAT...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCACCGGGACAGCATGAGCTaGACCTCCCTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TALLVTLSSAWQDAALGHRDSMS*TSLSSS
Trigger: AGAGCTGGAGAGGGAGGTGCAGCTCATGCTGTCCCG...GTGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGAGAGGTTGTTCCAGATaGCTGGTCCTTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLRGCSR*LVLGGT
Trigger: AGTGCCACCAAGGACCAGGCATCTGGAACAACCTCT...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCTTGTTTTTCCTCTGTaGAGTACAGGTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: APEQAGASVEARLLQVQLLVFPL*STGSHV
Trigger: CACATGAGAACCTGTACTGCACAGAGGAAAAACAAG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGTATTGGTGTCCCCCTaGTTGGAGCTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLVLVSP*LELGSP
Trigger: GGGGGACCCCAGCTCCAAGCAGGGGGACACCAATAC...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGAGTCCTCAGTGCCGTTaGTTCGGGGGATGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARSPQCR*FGGCQC
Trigger: ACATTGACATCCCCCGAAGCAACGGCACTGAGGACT...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTATCACGTGGGTCCTCTTaGGCTGCCACCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVSRGSS*AATFPW
Trigger: CCAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGA...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCATGAACTGGCACTGCTaGTGCAGCTTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSMNWHC*CSFLVG
Trigger: CCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTTCAT...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTCTGCCACGCTCATGCTaGGCTGGCCCCGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGLPRSC*AGPAAR
Trigger: GCGAGCAGCGGGGCCAGCGCAGCATGAGCGTGGCAG...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGCAGATGCCTGGTCCTTaGTGGCACTGTCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: CPRWATKSQLCTWLASHLQMPGP*WHCPCL
Trigger: TAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTG...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGTTGTTCCAGATGCCTaGTCCTTGGTGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSVVPDA*SLVALS
Trigger: GGACAGTGCCACCAAGGACCAGGCATCTGGAACAAC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGGTTGTTCCAGATGCCTaGTCCTTGGTGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGVVPDA*SLVALS
Trigger: GGACAGTGCCACCAAGGACCAGGCATCTGGAACAAC...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCCCCCTGCTTGGAGCTaGGGTCCCCCGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCPPAWS*GPPLQC
Trigger: ACACTGGAGCGGGGGACCCCAGCTCCAAGCAGGGGG...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGACTGCCTCCTGGTACTaGGGTGAGGAAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTETASWY*GEEVAS
Trigger: GCTGGCCACTTCCTCACCCCAGTACCAGGAGGCAGT...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGGTAGCAACTGCCTCCTaGTACTGGGGTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGVATAS*YWGEEV
Trigger: CACTTCCTCACCCCAGTACCAGGAGGCAGTTGCTAC...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTCTCAGCACGCTGGCGTaGAGGCTGGATAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGLSTLA*RLDRKA
Trigger: GGCCTTCCTATCCAGCCTCCACGCCAGCGTGCTGAG...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGTTGAGCGGCGGGAGCTaGGCTCATTCCTCAGCACGC +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLLSGGS*AHSSAR
Trigger: GCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAA...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCACCGTCCGTGATGAACTaGCACTGCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSPSVMN*HCCCSF
Trigger: GAAGCTGCAGCAGCAGTGCCAGTTCATCACGGACGG...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCTGGGCTGGGCCGAGATaGTGCGGAGCAGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFWAGPR*CGAGDS
Trigger: GGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCA...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCAAGCCGGCCTGCCATaGCTCGGCCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVQAGLP*LGPSSW
Trigger: CCAGCTGCTGGGGCCGAGCCATGGCAGGCCGGCTTG...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGTCACCTGCCTTGCCCTaGCACGGGGACCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKSPALP*HGDPGW
Trigger: CCACCCAGGGTCCCCGTGCCAGGGCAAGGCAGGTGA...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS-3UTR TCA 90 bp GACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCACCGGCAAGTCTTGACTaGCTGGAACAGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DSFIGHTEFCLAGRSPGPPASLD*LEQLGV
Trigger: GACCCCAAGCTGTTCCAGTCAGTCAAGACTTGCCGG...TGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTACCGGCAAGTCTTGACTaGCTGGAACAGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVPASLD*LEQLGV
Trigger: GACCCCAAGCTGTTCCAGTCAGTCAAGACTTGCCGG...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCAGTCCCCGGCAAGTCTTaGCTGACTGGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DSFIGHTEFCLAGRSPGPVPGKS*LTGTAW
Trigger: CCAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGAC...TGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp ACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCACTTTTGCGGGACAGCATaGGCTGCACCTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TALLVTLSSAWQDAALGHFCGTA*AAPPSP
Trigger: TGGAGAGGGAGGTGCAGCTCATGCTGTCCCGCAAAA...GTGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGTAGTGCACGCGCATaGCGGTGTCGAACACGTTGG +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLGSARA*RCRTRW
Trigger: CCAACGTGTTCGACACCGTCATGCGCGTGCACTACC...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTCAGCGTCCTGCATGCTaGCCACACTGCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGQRPAC*PHCLGG
Trigger: GCCGCCGAGGCAGTGTGGTCAGCATGCAGGACGCTG...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACACTGTGTTGTGGGTCTaGAGCACATCCGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHTVLWV*STSASS
Trigger: ACTGCTGGCGGATGTGCTTCAGACCCACAACACAGT...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTAGGGGCTGTGCCAGGTaGCGAGGGGGCTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIRGCAR*RGGCML
Trigger: GAGCATGCAGCCCCCTCGTCACCTGGCACAGCCCCT...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACGCCATGCCTGACACCTaGCTGGCGATACTGATCTCA +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHAMPDT*LAILIS
Trigger: TGAGATCAGTATCGCCAGTCAGGTGTCAGGCATGGC...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGTGGGCTGTGAAGGCGTaGACACGGACACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLEWAVKA*TRTPPC
Trigger: GCAAGGAGGTGTCCGTGTTCACGCCTTCACAGCCCA...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGGCCCATCCTGCCAGGTaGGCGCGGGAACAGGGATAC +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRAHPAR*AREQGY
Trigger: GTATCCCTGTTCCCGCGCTCACCTGGCAGGATGGGC...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS-3UTR GCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGTGTACAGCTGGGCAATaGGGTATTCATCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRCTAGQ*GIHPRS
Trigger: TGACCGTGGATGAATACCGCATTGCCCAGCTGTACA...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCGGATCTCTACCCCGCTaGCTTGCCCGTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFGSLPR*LARGSH
Trigger: ATGAGACCCACGGGCAAGGCAGCGGGGTAGAGATCC...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGCACCACCCGCAAGGCTaGTTTGGGCAAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLEHHPQG*FGQDGA
Trigger: CGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTG...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGATCGGAACTCCACCTTaGAGAGCTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGIGTPP*RACRRT
Trigger: TGTGCGCCTACAAGCTCTGCAAGGTGGAGTTCCGAT...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCCAATCTTGGACTGCATaGCCCAGTATCGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVQSWTA*PSIGTP
Trigger: TGGAGTTCCGATACTGGGGCATGCAGTCCAAGATTG...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCCGGGACAGCATGAGCTaGACCTCCCTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFRDSMS*TSLSSS
Trigger: AGAGCTGGAGAGGGAGGTGCAGCTCATGCTGTCCCG...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCTGGTGGCACTGTCCTTaGTTAGTTCTGAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSWWHCP*LVLRGL
Trigger: AAGGCCCCTCAGAACTAAGCAAGGACAGTGCCACCA...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGCTCCCCGTTTTTGCTaGCAGGATCAGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSAPRFC*QDQRLF
Trigger: GAACAACCTCTGATCCTGGCAGCAAAAACGGGGAGC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAGTATTGGTGTCCCCCTaGTTGGAGCTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTVLVSP*LELGSP
Trigger: GGGGGACCCCAGCTCCAAGCAGGGGGACACCAATAC...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCCATCAAATGCCAGGATaGCCCCAACACAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVHQMPG*PQHSLQ
Trigger: TTGGAGACTGTGTTGGGGGCATCCTGGCATTTGATG...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGCCTCGGCGGCTACTaGTTTGACTCTCAGACACTG +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHCLGGY*FDSQTL
Trigger: CAGTGTCTGAGAGTCAAAGCAGTAGCCGCCGAGGCA...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGGCTCAGGTGCCGACTaGTCTCCAGGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHGSGAD*SPGWSL
Trigger: GAGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCC...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGATCCTCATTGGCAACTaGGTCATTGATCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILILIGN*VIDPVV
Trigger: AACCACCGGATCAATGACGCAGTTGCCAATGAGGAT...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGACTAGAGTGTCTAGGTaGAGCCACTCACCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRTRVSR*SHSPEG
Trigger: ACCTTCAGGTGAGTGGCTGCACCTAGACACTCTAGT...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCACTAGAGTGTCTAGGTaGAGCCACTCACCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVTRVSR*SHSPEG
Trigger: ACCTTCAGGTGAGTGGCTGCACCTAGACACTCTAGT...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGGCCGAAGCTGCCCTTaGGCAAAGCCATGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHGRSCP*AKPCAW
Trigger: CCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCC...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTCTGCCACGCTCATGCTaGGCTGGCCCCGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCLPRSC*AGPAAR
Trigger: GCGAGCAGCGGGGCCAGCGCAGCATGAGCGTGGCAG...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTTTCATCCACGGTCATTaGCAGGGGAATCCGGTATTC +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAFIHGH*QGNPVF
Trigger: GAATACCGGATTCCCCTGCCAATGACCGTGGATGAA...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACATTCATCCACGGTCATTaGCAGGGGAATCCGGTATTC +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTFIHGH*QGNPVF
Trigger: GAATACCGGATTCCCCTGCCAATGACCGTGGATGAA...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCGCTGCCTTGCCCGTaGGTCTCATTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KDSFIGHTEFCLAGRSPGPLPCP*VSFRLF
Trigger: GAAGAGCCGGAATGAGACCCACGGGCAAGGCAGCGG...CCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAATGCCTGGTCCTTGGTaGCACTGTCCTTGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTMPGPW*HCPCLV
Trigger: AACTAAGCAAGGACAGTGCCACCAAGGACCAGGCAT...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGAGGACCTTGAGGACTTaGAGGAGGTGGACCACTGCT +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGRTLRT*RRWTTA
Trigger: AGCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCT...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCACCTTCGTCGGAGTCCCTaGCGATACTCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: TALLVTLSSAWQDAALGHLRRSP*RYSASS
Trigger: GGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAG...GTGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGAGGGGGATGTGGTCCTaGCTGCTAGACAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLRGMWS*LLDRQP
Trigger: GGGCTGTCTGTCTAGCAGCCAGGACCACATCCCCCT...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGAAGGTCACACCTTCCTaGGACTTGATGAAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARKVTPS*DLMKSP
Trigger: CGGAGACTTCATCAAGTCCCAGGAAGGTGTGACCTT...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCTTGAGCGGCGGGAGCTaGGCTCATTCCTCAGCACGC +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSLSGGS*AHSSAR
Trigger: GCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAA...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTTTCCGCAGCTTCACGTaGGTCCTCTTGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGFRSFT*VLLRCH
Trigger: GTGGCAGCGCAAGAGGACCCACGTGAAGCTGCGGAA...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTGCGTCATTGATCCGGTaGTTGGCTGCCACGTTCCGC +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGASLIR*LAATFR
Trigger: GCGGAACGTGGCAGCCAACCACCGGATCAATGACGC...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGATGGCTGGGCCCACTaGGCTGGGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVDGWAH*AGPRWC
Trigger: GCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATC...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTCTCGGCCCCAGCAGCTaGCTGCCACGCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNILGPSS*LPRSCC
Trigger: GCAGCATGAGCGTGGCAGCCAGCTGCTGGGGCCGAG...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTCTCGGCCCCAGCAGCTaGCTGCCACGCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGLGPSS*LPRSCC
Trigger: GCAGCATGAGCGTGGCAGCCAGCTGCTGGGGCCGAG...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGGTAGATTTCATCTTGTaGTTCCTCAGGCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARVDFIL*FLRLRT
Trigger: AGTCCGGAGCCTGAGGAATCACAAGATGAAATCTAC...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGCGCTGGAGGCCACCCTaGACTCAGAGCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: TKTALLVTLSSAWQDAALRWRPP*TQSHSA
Trigger: AGCAGAGTGGCTCTGAGTTCAGGGTGGCCTCCAGCG...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGACCAGCAGCAGCACGTaGATCTTGGAGGGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKTSSST*ILEGGA
Trigger: CGCGCCACCCTCCAAGATTCACGTGCTGCTGCTGGT...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACTCCAGGCGGGAGGCTaGGGGGTCCGCGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKLQAGG*GVRGVE
Trigger: TTCCACCCCGCGGACCCCTCAGCCTCCCGCCTGGAG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGGGTACCGAGGGATGCTaGAAGGCGGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRGTEGC*KAAGCG
Trigger: TCCACAGCCTGCCGCCTTTCAGCATCCCTCGGTACC...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTCCCGGTGATTGTACTTaGGCTGGGCCAGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGPGDCT*AGPGGP
Trigger: CGGCCCACCTGGCCCAGCTCAAGTACAATCACCGGG...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGTGCTGGGGGTGTGGTTaGGCGACGAGGGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKCWGCG*ATRDPS
Trigger: AGAAGGGTCCCTCGTCGCTCAACCACACCCCCAGCA...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS-3UTR GCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTGTACAGCTGGGCAATaGGGTATTCATCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGCTAGQ*GIHPRS
Trigger: TGACCGTGGATGAATACCGCATTGCCCAGCTGTACA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGAGCCAGGAATGTGCATaGCCACATGATACACCTTGT +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARSQECA*PHDTPC
Trigger: ACAAGGTGTATCATGTGGGCATGCACATTCCTGGCT...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCACCACCCGCAAGGCTaGTTTGGGCAAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: KDSFIGHTEFCLAGRSPGHHPQG*FGQDGA
Trigger: CGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTG...CCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGCTTTCAATCTTGGACTaGATGCCCCAGTATCGGAAC +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARLSILD*MPQYRN
Trigger: GTTCCGATACTGGGGCATGCAGTCCAAGATTGAAAG...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACGGGACAGCATGAGCTaGACCTCCCTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTRDSMS*TSLSSS
Trigger: AGAGCTGGAGAGGGAGGTGCAGCTCATGCTGTCCCG...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGTCCTCCACTCTGAGATaGTATGTCGGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLESSTLR*YVGRGW
Trigger: CCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGA...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTCCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTAAGGATGGTGCCTCCATaGAGCACCAGCAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: VPHACAVHSYTAESVSPVRMVPP*STSSST
Trigger: CGTGCTGCTGCTGGTGCTGCATGGAGGCACCATCCT...TACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTCTGCATTCGCCAGGGTaGCCGGGGACAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNILHSPG*PGTAGQ
Trigger: CTGACCTGCTGTCCCCGGGCACCCTGGCGAATGCAG...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAAGTCCTCAGTGCCGTTaGTTCGGGGGATGTCAATGT +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPSPQCR*FGGCQC
Trigger: ACATTGACATCCCCCGAAGCAACGGCACTGAGGACT...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTCTTTTGCGGGGCAGCTaGCTTCTGGAGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGLLRGS*LLESSV
Trigger: CACTGAGGACTCCAGAAGGCAGCTGCCCCGCAAAAG...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTTGTAGCTCTCGGCCATaGCTGACACCTGACTGGCGA +
Preference number: 4 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGCSSRP*LTPDWR
Trigger: TCGCCAGTCAGGTGTCAGGCATGGCCGAGAGCTACA...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATCCTCATTGGCAACTaGGTCATTGATCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLILIGN*VIDPVV
Trigger: AACCACCGGATCAATGACGCAGTTGCCAATGAGGAT...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAATCCTCATTGGCAACTaGGTCATTGATCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTILIGN*VIDPVV
Trigger: AACCACCGGATCAATGACGCAGTTGCCAATGAGGAT...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCAACTGGCACTGCTGCTaGAGCTTCTTGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSNWHCC*SFLVGR
Trigger: CCGCCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTT...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTGGCCGAAGCTGCCCTTaGGCAAAGCCATGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIGRSCP*AKPCAW
Trigger: CCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCC...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGATGTCTGTTATCAGCTaGCTCTTTTCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWMSVIS*LFSTGD
Trigger: GTCTCCTGTGGAAAAGAGCCAGCTGATAACAGACAT...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTCAAGTCTTGACTGACTaGAACAGCTTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVAQVLTD*NSLGSS
Trigger: AGAAGACCCCAAGCTGTTCCAGTCAGTCAAGACTTG...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCAAGTCTTGACTGACTaGAACAGCTTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRQVLTD*NSLGSS
Trigger: AGAAGACCCCAAGCTGTTCCAGTCAGTCAAGACTTG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGATGCCTGGTCCTTGGTaGCACTGTCCTTGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGMPGPW*HCPCLV
Trigger: AACTAAGCAAGGACAGTGCCACCAAGGACCAGGCAT...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCACAGATGCCTGGTCCTTaGTGGCACTGTCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSQMPGP*WHCPCL
Trigger: TAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTG...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGACTTGGTCATGTCCTTaGCTTGTTTTTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TEQDAQECLPGWARRPILTWSCP*LVFPLC
Trigger: GCACAGAGGAAAAACAAGCCAAGGACATGACCAAGT...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTAGGGCACCAGGCGGATaGCTAGGTGGCCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGRAPGG*LGGLGH
Trigger: GTGCCCTAGGCCACCTAGCCATCCGCCTGGTGCCCT...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCAGGGGGATGTGGTCCTaGCTGCTAGACAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSRGMWS*LLDRQP
Trigger: GGGCTGTCTGTCTAGCAGCCAGGACCACATCCCCCT...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGCGCTGGCGTGGAGGCTaGATAGGAAGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKRWRGG*IGRPGA
Trigger: AGCACCAGGCCTTCCTATCCAGCCTCCACGCCAGCG...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATCTCAGCACGCTGGCGTaGAGGCTGGATAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHLSTLA*RLDRKA
Trigger: GGCCTTCCTATCCAGCCTCCACGCCAGCGTGCTGAG...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATTGGGCTGGGCCGAGATaGTGCGGAGCAGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHWAGPR*CGAGDS
Trigger: GGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCA...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAACAAGCCGGCCTGCCATaGCTCGGCCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLLLSVEVGLPQENEPKEQAGLP*LGPSSW
Trigger: CCAGCTGCTGGGGCCGAGCCATGGCAGGCCGGCTTG...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAGTCCCCGGCAAGTCTTaGCTGACTGGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTVPGKS*LTGTAW
Trigger: CCAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGAC...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGCGCTTCTTGTACTCCTaGATCCAGTTTTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GPASESGLADSGTEPHRWRFLYS*IQFSER
Trigger: TCTTTCTGAAAACTGGATTCAGGAGTACAAGAAGCG...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp AAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCTGCATCCTCCACTCTaGGATGCTATGTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KDSFIGHTEFCLAGRSPGLHPPL*DAMSGG
Trigger: CCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAG...CCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGCGGCGGCTACTGCTTTaGCTCTCAGACACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRRRLLL*LSDTGW
Trigger: CCAGCCAGTGTCTGAGAGTCAAAGCAGTAGCCGCCG...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCACTGTGTTGTGGGTCTaGAGCACATCCGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFTVLWV*STSASS
Trigger: ACTGCTGGCGGATGTGCTTCAGACCCACAACACAGT...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086123.11
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGCTCTCGGCCATGCCTaGCACCTGACTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDALGHA*HLTGDT
Trigger: AGTATCGCCAGTCAGGTGTCAGGCATGGCCGAGAGC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTTGGGCTGTGAAGGCGTaGACACGGACACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCWAVKA*TRTPPC
Trigger: GCAAGGAGGTGTCCGTGTTCACGCCTTCACAGCCCA...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGGCATGTGCGCGCAGGTaGAGCTCAGAGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRACARR*SSEMSS
Trigger: GCTGCTCATCTCTGAGCTTCACCTGCGCGCACATGC...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTGCATGTGCGCGCAGGTaGAGCTCAGAGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCACARR*SSEMSS
Trigger: GCTGCTCATCTCTGAGCTTCACCTGCGCGCACATGC...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCATGGGAGAGAGGCTaGTGGAGTTATAGACTGCGA +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVAWERG*WSYRLR
Trigger: TCGCAGTCTATAACTCCATCAGCCTCTCTCCCATGC...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGGCATGGGAGAGAGGCTaGTGGAGTTATAGACTGCGA +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEAWERG*WSYRLR
Trigger: TCGCAGTCTATAACTCCATCAGCCTCTCTCCCATGC...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGTGTACAGCTGGGCAATaGGGTATTCATCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGCTAGQ*GIHPRS
Trigger: TGACCGTGGATGAATACCGCATTGCCCAGCTGTACA...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTTCTACCCCGCTGCCTTaGCCGTGGGTCTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: YKDSFIGHTEFCLAGRSPSTPLP*PWVSFR
Trigger: CCGGAATGAGACCCACGGGCAAGGCAGCGGGGTAGA...AGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCCTTTCAATCTTGGACTaGATGCCCCAGTATCGGAAC +
Preference number: 4 (lower is better)
Translates to: RGWPHTCAVLTARSDISSLSILD*MPQYRN
Trigger: GTTCCGATACTGGGGCATGCAGTCCAAGATTGAAAG...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAAGAGGTTGTTCCAGATaGCTGGTCCTTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVRGCSR*LVLGGT
Trigger: AGTGCCACCAAGGACCAGGCATCTGGAACAACCTCT...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCACGCTCCCCGTTTTTGCTaGCAGGATCAGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TALLVTLSSAWQDAALGHAPRFC*QDQRLF
Trigger: GAACAACCTCTGATCCTGGCAGCAAAAACGGGGAGC...GTGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp GACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCATCCCTGGCGATACTCTaGATCCTCCACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: DSFIGHTEFCLAGRSPGPSLAIL*ILHSEM
Trigger: CATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGA...TGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTATCCCTGGCGATACTCTaGATCCTCCACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVSLAIL*ILHSEM
Trigger: CATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGA...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAGTACAGGTTCTCATGTaGATCGAAGAACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QGPQARLSGALSQCWVFLVQVLM*IEELLF
Trigger: GAAGAGGAGTTCTTCGATGCACATGAGAACCTGTAC...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACATCGATGATGTTCAGCTaGTCCACGCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTSMMFS*STLEAT
Trigger: GGTGGCCTCCAGCGTGGAGCAGCTGAACATCATCGA...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGAGGATGGTGCCTCCATaGAGCACCAGCAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRRMVPP*STSSST
Trigger: CGTGCTGCTGCTGGTGCTGCATGGAGGCACCATCCT...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACCATCAAATGCCAGGATaGCCCCAACACAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHHQMPG*PQHSLQ
Trigger: TTGGAGACTGTGTTGGGGGCATCCTGGCATTTGATG...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACTTTTGCGGGGCAGCTaGCTTCTGGAGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTLLRGS*LLESSV
Trigger: CACTGAGGACTCCAGAAGGCAGCTGCCCCGCAAAAG...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATTCACGTGGGTCCTCTTaGGCTGCCACCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHSRGSS*AATFPW
Trigger: CCAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGA...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCAATGTCTGTTATCAGCTaGCTCTTTTCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSCPRWATKSQLCTWLASMSVIS*LFSTGD
Trigger: GTCTCCTGTGGAAAAGAGCCAGCTGATAACAGACAT...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGCTGACTGGAACAGCTTaGGGTCTTCTTCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: TARSDISSGTALSSGWGRLTGTA*GLLLSY
Trigger: ATAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAG...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGCTGACTGGAACAGCTTaGGGTCTTCTTCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLLTGTA*GLLLSY
Trigger: ATAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAG...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGCGCAGACCTGTGTCATaGATGAACCTTTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARRRPVS*MNLSIL
Trigger: CAAGATTGAAAGGTTCATCCATGACACAGGTCTGCG...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGACTGCCTCCTGGTACTaGGGTGAGGAAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRTASWY*GEEVAS
Trigger: GCTGGCCACTTCCTCACCCCAGTACCAGGAGGCAGT...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAAAGGTCACACCTTCCTaGGACTTGATGAAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPKVTPS*DLMKSP
Trigger: CGGAGACTTCATCAAGTCCCAGGAAGGTGTGACCTT...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCCCTGGTGCTGCTGGATaGTGTCCAGCTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSPGAAG*CPAHRW
Trigger: CCACCTATGAGCTGGACACCATCCAGCAGCACCAGG...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGGAGGGGTCCGCGGGGTaGAAGAGGTTGTACACTTGC +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGREGSAG*KRLYTC
Trigger: GCAAGTGTACAACCTCTTCCACCCCGCGGACCCCTC...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTAAAGGCGGCAGGCTGTaGAAACGCCGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIKGGRL*KRRSSS
Trigger: GCTGCTGGAGCGGCGTTTCCACAGCCTGCCGCCTTT...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGCTGCTGCAGCTTCTTaGTGGGGCGGCCCACAATGT +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDAAAAS*WGGPQC
Trigger: ACATTGTGGGCCGCCCCACCAAGAAGCTGCAGCAGC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTCTCGGCCCCAGCAGCTaGCTGCCACGCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPILGPSS*LPRSCC
Trigger: GCAGCATGAGCGTGGCAGCCAGCTGCTGGGGCCGAG...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCCGGCAAGTCTTGACTaGCTGGAACAGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCPASLD*LEQLGV
Trigger: GACCCCAAGCTGTTCCAGTCAGTCAAGACTTGCCGG...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGCGCTTCTTGTACTCCTaGATCCAGTTTTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LRPCLCMSPATDVCAQARRFLYS*IQFSER
Trigger: TCTTTCTGAAAACTGGATTCAGGAGTACAAGAAGCG...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCGCTTGGAGGACCTTaGGGACTTGGAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LYKDSFIGHTEFCLAGRSPLGGP*GLGGGG
Trigger: TCCACCTCCTCCAAGTCCTCAAGGTCCTCCAAGCGG...GCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTGGCAGACCTGACCATTaGAGGTCACACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCGRPDH*RSHLPG
Trigger: CCCAGGAAGGTGTGACCTTCAATGGTCAGGTCTGCC...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGGCAGACCTGACCATTaGAGGTCACACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHGRPDH*RSHLPG
Trigger: CCCAGGAAGGTGTGACCTTCAATGGTCAGGTCTGCC...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTCGGCGGCTACTGCTTTaGCTCTCAGACACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIRRLLL*LSDTGW
Trigger: CCAGCCAGTGTCTGAGAGTCAAAGCAGTAGCCGCCG...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGCCTGACTGGCGATACTaGTCTCACTGGCTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRPDWRY*SHWLCG
Trigger: TCCGCAGAGCCAGTGAGATCAGTATCGCCAGTCAGG...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTTGGGCTGTGAAGGCGTaGACACGGACACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIWAVKA*TRTPPC
Trigger: GCAAGGAGGTGTCCGTGTTCACGCCTTCACAGCCCA...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTCCCTGGGGAGCACAGTaGTGTAGCTGTCGGCGAATG +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGPWGAQ*CSCRRM
Trigger: CATTCGCCGACAGCTACATCACTGTGCTCCCCAGGG...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTATGTACAGCTGGGCAATaGGGTATTCATCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVCTAGQ*GIHPRS
Trigger: TGACCGTGGATGAATACCGCATTGCCCAGCTGTACA...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTTCTACCCCGCTGCCTTaGCCGTGGGTCTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCSTPLP*PWVSFR
Trigger: CCGGAATGAGACCCACGGGCAAGGCAGCGGGGTAGA...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCGGATCTCTACCCCGCTaGCTTGCCCGTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: RLYKDSFIGHTEFCLAGRGSLPR*LARGSH
Trigger: ATGAGACCCACGGGCAAGGCAGCGGGGTAGAGATCC...GCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAAGCCAGGAATGTGCATaGCCACATGATACACCTTGT +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPSQECA*PHDTPC
Trigger: ACAAGGTGTATCATGTGGGCATGCACATTCCTGGCT...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCATCGGAACTCCACCTTaGAGAGCTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: KTALLVTLSSAWQDAALGIGTPP*RACRRT
Trigger: TGTGCGCCTACAAGCTCTGCAAGGTGGAGTTCCGAT...GCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCAATCTTGGACTGCATaGCCCAGTATCGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEQSWTA*PSIGTP
Trigger: TGGAGTTCCGATACTGGGGCATGCAGTCCAAGATTG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGTCGATGATGTTCAGCTaGTCCACGCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: TKTALLVTLSSAWQDAALSMMFS*STLEAT
Trigger: GGTGGCCTCCAGCGTGGAGCAGCTGAACATCATCGA...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCATCAAATGCCAGGATaGCCCCAACACAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEHQMPG*PQHSLQ
Trigger: TTGGAGACTGTGTTGGGGGCATCCTGGCATTTGATG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCTGCCTCGGCGGCTACTaGTTTGACTCTCAGACACTG +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSCLGGY*FDSQTL
Trigger: CAGTGTCTGAGAGTCAAAGCAGTAGCCGCCGAGGCA...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGGATGTCAATGTTGCTaGGGCTCAGGTGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDGCQCC*GSGADC
Trigger: GCAGTCGGCACCTGAGCCGCAGCAACATTGACATCC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTAACTGGCACTGCTGCTaGAGCTTCTTGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGNWHCC*SFLVGR
Trigger: CCGCCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTT...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGGTGATGAACTGGCACTaGTGCTGCAGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLEVMNWH*CCSFLV
Trigger: CACCAAGAAGCTGCAGCAGCAGTGCCAGTTCATCAC...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAAGGCCGAAGCTGCCCTTaGGCAAAGCCATGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: PLLLSVEVGLPQENEPKEGRSCP*AKPCAW
Trigger: CCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCC...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTCCGCTGCCTTGCCCGTaGGTCTCATTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCPLPCP*VSFRLF
Trigger: GAAGAGCCGGAATGAGACCCACGGGCAAGGCAGCGG...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTCCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTAAGGACCTTGAGGACTTaGAGGAGGTGGACCACTGCT +
Preference number: 4 (lower is better)
Translates to: VPHACAVHSYTAESVSPVRTLRT*RRWTTA
Trigger: AGCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCT...TACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGACTTGGTCATGTCCTTaGCTTGTTTTTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGTWSCP*LVFPLC
Trigger: GCACAGAGGAAAAACAAGCCAAGGACATGACCAAGT...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACCCCCTGCTTGGAGCTaGGGTCCCCCGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKPPAWS*GPPLQC
Trigger: ACACTGGAGCGGGGGACCCCAGCTCCAAGCAGGGGG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAAAGGTCACACCTTCCTaGGACTTGATGAAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVKVTPS*DLMKSP
Trigger: CGGAGACTTCATCAAGTCCCAGGAAGGTGTGACCTT...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGCATCCGCCAGCAGTGTaGAGCAGCCGTCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEHPPAV*SSRPPA
Trigger: CGCTGGGGGACGGCTGCTCCACACTGCTGGCGGATG...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000086123.11
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGTCTGTCCCCACCACTTaGCAGCAATCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKSVPTT*QQSGRC
Trigger: GCATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGA...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCCGTCCGTGATGAACTaGCACTGCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCPSVMN*HCCCSF
Trigger: GAAGCTGCAGCAGCAGTGCCAGTTCATCACGGACGG...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCCACAGGAGACAGGTTaGACACATTATTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGPQETG*THYCFP
Trigger: GGGAAAACAATAATGTGTTCAACCTGTCTCCTGTGG...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCAGTAGATTTCATCTTGTaGTTCCTCAGGCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: DSFIGHTEFCLAGRSPGPVDFIL*FLRLRT
Trigger: AGTCCGGAGCCTGAGGAATCACAAGATGAAATCTAC...TGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCTAAGGGCCCATACATaGACCGGCCCGTCACAACCT +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVLRAHT*TGPSQP
Trigger: AGGTTGTGACGGGCCGGTTCATGTATGGGCCCTTAG...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGAGCCAGGAATGTGCATaGCCACATGATACACCTTGT +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTESQECA*PHDTPC
Trigger: ACAAGGTGTATCATGTGGGCATGCACATTCCTGGCT...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCAAGCCAGGAATGTGCATaGCCACATGATACACCTTGT +
Preference number: 4 (lower is better)
Translates to: DSFIGHTEFCLAGRSPGPSQECA*PHDTPC
Trigger: ACAAGGTGTATCATGTGGGCATGCACATTCCTGGCT...TGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCATCGGAACTCCACCTTaGAGAGCTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSIGTPP*RACRRT
Trigger: TGTGCGCCTACAAGCTCTGCAAGGTGGAGTTCCGAT...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCTCCTCCACTCTGAGATaGTATGTCGGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLYKDSFIGHTEFCLAGRSSTLR*YVGRGW
Trigger: CCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGA...GCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGGTACAGGTTCTCATGTaGATCGAAGAACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EAERSTRSKMPRNASQAGVQVLM*IEELLF
Trigger: GAAGAGGAGTTCTTCGATGCACATGAGAACCTGTAC...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTGTATTGGTGTCCCCCTaGTTGGAGCTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIVLVSP*LELGSP
Trigger: GGGGGACCCCAGCTCCAAGCAGGGGGACACCAATAC...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATTGCCTCGGCGGCTACTaGTTTGACTCTCAGACACTG +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHCLGGY*FDSQTL
Trigger: CAGTGTCTGAGAGTCAAAGCAGTAGCCGCCGAGGCA...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAGGCTCAGGTGCCGACTaGTCTCCAGGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKGSGAD*SPGWSL
Trigger: GAGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCC...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTGGATGTCAATGTTGCTaGGGCTCAGGTGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGGCQCC*GSGADC
Trigger: GCAGTCGGCACCTGAGCCGCAGCAACATTGACATCC...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTCCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTAAGTCCTCAGTGCCGTTaGTTCGGGGGATGTCAATGT +
Preference number: 4 (lower is better)
Translates to: VPHACAVHSYTAESVSPVSPQCR*FGGCQC
Trigger: ACATTGACATCCCCCGAAGCAACGGCACTGAGGACT...TACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAAGTCCTCAGTGCCGTTaGTTCGGGGGATGTCAATGT +
Preference number: 4 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTSPQCR*FGGCQC
Trigger: ACATTGACATCCCCCGAAGCAACGGCACTGAGGACT...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGTTCTGGAGTCCTCAGTaGCGTTGCTTCGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRFWSPQ*RCFGGC
Trigger: ACATCCCCCGAAGCAACGGCACTGAGGACTCCAGAA...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCTTTTGCGGGGCAGCTaGCTTCTGGAGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVLLRGS*LLESSV
Trigger: CACTGAGGACTCCAGAAGGCAGCTGCCCCGCAAAAG...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGACTAGAGTGTCTAGGTaGAGCCACTCACCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLETRVSR*SHSPEG
Trigger: ACCTTCAGGTGAGTGGCTGCACCTAGACACTCTAGT...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAAGTCTGTGTCCGATCGTaGCGATGGCTGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: PLLLSVEVGLPQENEPKEVCVRS*RWLGPL
Trigger: CAGTGGGCCCAGCCATCGGCACGATCGGACACAGAC...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGAGCTCTGGGTTTCTCTaGACGGTCTCGACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRSSGFL*TVSTSS
Trigger: ACTGCTGGTCGAGACCGTGCAGAGAAACCCAGAGCT...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS-3UTR CCA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCATGTATCATGTACAGCTaGGCAATGCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPCIMYS*AMRYSS
Trigger: GGATGAATACCGCATTGCCCAGCTGTACATGATACA...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAATGTCTGTTATCAGCTaGCTCTTTTCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LELHGLSQCREGAGEVWSMSVIS*LFSTGD
Trigger: GTCTCCTGTGGAAAAGAGCCAGCTGATAACAGACAT...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTAGCAACTGCCTCCTaGTACTGGGGTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHVATAS*YWGEEV
Trigger: CACTTCCTCACCCCAGTACCAGGAGGCAGTTGCTAC...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCACTTGCTGACACGCTaGACGCAGCTGGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCHLLTR*TQLENV
Trigger: GACGTTTTCCAGCTGCGTCCAGCGTGTCAGCAAGTG...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTTTCCGCAGCTTCACGTaGGTCCTCTTGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCFRSFT*VLLRCH
Trigger: GTGGCAGCGCAAGAGGACCCACGTGAAGCTGCGGAA...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTAGCCTTGTGGCGCAGTaGGTCGTGCACCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPISLVAQ*VVHQAI
Trigger: GATGGCCTGGTGCACGACCCACTGCGCCACAAGGCT...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTTGGGCTGGGCCGAGATaGTGCGGAGCAGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIWAGPR*CGAGDS
Trigger: GGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCA...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTTTTTGCGGGACAGCATaGGCTGCACCTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCFCGTA*AAPPSP
Trigger: TGGAGAGGGAGGTGCAGCTCATGCTGTCCCGCAAAA...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTCCGCTTGGAGGACCTTaGGGACTTGGAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIPLGGP*GLGGGG
Trigger: TCCACCTCCTCCAAGTCCTCAAGGTCCTCCAAGCGG...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACGCTGGAGGCCACCCTaGACTCAGAGCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKRWRPP*TQSHSA
Trigger: AGCAGAGTGGCTCTGAGTTCAGGGTGGCCTCCAGCG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTTCACCTCATCCTCGATaGTGTTCAGCTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNISPHPR*CSAAPR
Trigger: GCGTGGAGCAGCTGAACATCATCGAGGATGAGGTGA...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTGCCATGCCTGACACCTaGCTGGCGATACTGATCTCA +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGAMPDT*LAILIS
Trigger: TGAGATCAGTATCGCCAGTCAGGTGTCAGGCATGGC...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGCATGGGAGAGAGGCTaGTGGAGTTATAGACTGCGA +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKAWERG*WSYRLR
Trigger: TCGCAGTCTATAACTCCATCAGCCTCTCTCCCATGC...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGATCGGAACTCCACCTTaGAGAGCTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRIGTPP*RACRRT
Trigger: TGTGCGCCTACAAGCTCTGCAAGGTGGAGTTCCGAT...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGCTTTCAATCTTGGACTaGATGCCCCAGTATCGGAAC +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLLSILD*MPQYRN
Trigger: GTTCCGATACTGGGGCATGCAGTCCAAGATTGAAAG...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATTGGTGGCACTGTCCTTaGTTAGTTCTGAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHWWHCP*LVLRGL
Trigger: AAGGCCCCTCAGAACTAAGCAAGGACAGTGCCACCA...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATAGAGGTTGTTCCAGATaGCTGGTCCTTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHRGCSR*LVLGGT
Trigger: AGTGCCACCAAGGACCAGGCATCTGGAACAACCTCT...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGCTCCCCGTTTTTGCTaGCAGGATCAGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDAPRFC*QDQRLF
Trigger: GAACAACCTCTGATCCTGGCAGCAAAAACGGGGAGC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACTCCCTGGCGATACTCTaGATCCTCCACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDSLAIL*ILHSEM
Trigger: CATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGA...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAGTATTGGTGTCCCCCTaGTTGGAGCTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKVLVSP*LELGSP
Trigger: GGGGGACCCCAGCTCCAAGCAGGGGGACACCAATAC...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATTGCTGCGGCTCAGGTaGCGACTGCTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKLLRLR*RLLSRL
Trigger: CAGCCTGGAGAGCAGTCGGCACCTGAGCCGCAGCAA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTTTCTGGAGTCCTCAGTaGCGTTGCTTCGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGFWSPQ*RCFGGC
Trigger: ACATCCCCCGAAGCAACGGCACTGAGGACTCCAGAA...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGTTCTGGAGTCCTCAGTaGCGTTGCTTCGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVFWSPQ*RCFGGC
Trigger: ACATCCCCCGAAGCAACGGCACTGAGGACTCCAGAA...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGATGAACTGGCACTGCTaGTGCAGCTTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVMNWHC*CSFLVG
Trigger: CCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTTCAT...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGTGATGAACTGGCACTaGTGCTGCAGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDVMNWH*CCSFLV
Trigger: CACCAAGAAGCTGCAGCAGCAGTGCCAGTTCATCAC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGGTCTGTGTCCGATCGTaGCGATGGCTGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEVCVRS*RWLGPL
Trigger: CAGTGGGCCCAGCCATCGGCACGATCGGACACAGAC...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGCCGCTGCCTTGCCCGTaGGTCTCATTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEPLPCP*VSFRLF
Trigger: GAAGAGCCGGAATGAGACCCACGGGCAAGGCAGCGG...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCTGACTGGAACAGCTTaGGGTCTTCTTCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: GPVTVLGVPNVAGCADTELTGTA*GLLLSY
Trigger: ATAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCATGCCTGGTCCTTGGTaGCACTGTCCTTGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSMPGPW*HCPCLV
Trigger: AACTAAGCAAGGACAGTGCCACCAAGGACCAGGCAT...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATCAGATGCCTGGTCCTTaGTGGCACTGTCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHQMPGP*WHCPCL
Trigger: TAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTG...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGCAGATGCCTGGTCCTTaGTGGCACTGTCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TKTALLVTLSSAWQDAALQMPGP*WHCPCL
Trigger: TAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTG...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp AGGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCGTTGTTCCAGATGCCTaGTCCTTGGTGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: RLYKDSFIGHTEFCLAGRVVPDA*SLVALS
Trigger: GGACAGTGCCACCAAGGACCAGGCATCTGGAACAAC...GCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp GGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAAGGACCTTGAGGACTTaGAGGAGGTGGACCACTGCT +
Preference number: 4 (lower is better)
Translates to: GSTKTALLVTLSSAWQDARTLRT*RRWTTA
Trigger: AGCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCT...TGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGGGGGCAGCTGCCTTCTaGAGTCCTCAGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEGAAAF*SPQCRC
Trigger: GCAACGGCACTGAGGACTCCAGAAGGCAGCTGCCCC...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTTCTGTCCCCACCACTTaGCAGCAATCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCSVPTT*QQSGRC
Trigger: GCATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGA...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTTCACCTCATCCTCGATaGTGTTCAGCTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCSPHPR*CSAAPR
Trigger: GCGTGGAGCAGCTGAACATCATCGAGGATGAGGTGA...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCCATGCCTGACACCTaGCTGGCGATACTGATCTCA +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCAMPDT*LAILIS
Trigger: TGAGATCAGTATCGCCAGTCAGGTGTCAGGCATGGC...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACGGGACAGCATGAGCTaGACCTCCCTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKRDSMS*TSLSSS
Trigger: AGAGCTGGAGAGGGAGGTGCAGCTCATGCTGTCCCG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCATGGTGGCACTGTCCTTaGTTAGTTCTGAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GSTKTALLVTLSSAWQDAWWHCP*LVLRGL
Trigger: AAGGCCCCTCAGAACTAAGCAAGGACAGTGCCACCA...TGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp TCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCAGAGGTTGTTCCAGATaGCTGGTCCTTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: STKTALLVTLSSAWQDAARGCSR*LVLGGT
Trigger: AGTGCCACCAAGGACCAGGCATCTGGAACAACCTCT...GGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTTCGATGATGTTCAGCTaGTCCACGCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPISMMFS*STLEAT
Trigger: GGTGGCCTCCAGCGTGGAGCAGCTGAACATCATCGA...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACAGGTAGGCCGAAGCTaGCCTTGCGCAAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKQVGRS*PCAKPC
Trigger: GCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCTGACTGGAACAGCTTaGGGTCTTCTTCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: KTALLVTLSSAWQDAALGLTGTA*GLLLSY
Trigger: ATAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAG...GCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGCTGACTGGAACAGCTTaGGGTCTTCTTCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: PSWAGHPARSHNQLGSLELTGTA*GLLLSY
Trigger: ATAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAG...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCGCAGACCTGTGTCATaGATGAACCTTTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: KTALLVTLSSAWQDAALGRRPVS*MNLSIL
Trigger: CAAGATTGAAAGGTTCATCCATGACACAGGTCTGCG...GCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGCGCAGACCTGTGTCATaGATGAACCTTTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLRRPVS*MNLSIL
Trigger: CAAGATTGAAAGGTTCATCCATGACACAGGTCTGCG...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTCTTCGTCGGAGTCCCTaGCGATACTCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPILRRSP*RYSASS
Trigger: GGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAG...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGACTATTGCTGTTGTCCTTGGCATGGCTGACAGCTGGGCAGGCATGGGCATTCACTTGGTCATGTCCTTaGCTTGTTTTTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GLLLLSLAWLTAGQAWAFTWSCP*LVFPLC
Trigger: GCACAGAGGAAAAACAAGCCAAGGACATGACCAAGT...GAATGCCCATGCCTGCCCAGCTGTCAGCCATGCCAAGGACAACAGCAATAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAACTGCCTCCTGGTACTaGGGTGAGGAAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKTASWY*GEEVAS
Trigger: GCTGGCCACTTCCTCACCCCAGTACCAGGAGGCAGT...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATTGTCCAGCTCATAGGTaGACGAGTCACTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHCPAHR*TSHSFC
Trigger: GCAAAAGGAGTGACTCGTCCACCTATGAGCTGGACA...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATTCCGCAGCTTCACGTaGGTCCTCTTGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKFRSFT*VLLRCH
Trigger: GTGGCAGCGCAAGAGGACCCACGTGAAGCTGCGGAA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGTTTTGCGGGACAGCATaGGCTGCACCTCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEFCGTA*AAPPSP
Trigger: TGGAGAGGGAGGTGCAGCTCATGCTGTCCCGCAAAA...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGACTGTGTTGTGGGTCTaGAGCACATCCGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVTVLWV*STSDSE
Trigger: TTCTGAGTCGGATGTGCTTCAGACCCACAACACAGT...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS-3UTR GCA 90 bp AGGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCTGTACAGCTGGGCAATaGGGTATTCATCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: RLYKDSFIGHTEFCLAGRCTAGQ*GIHPRS
Trigger: TGACCGTGGATGAATACCGCATTGCCCAGCTGTACA...GCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp TCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCAATCTTGGACTGCATaGCCCAGTATCGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: STKTALLVTLSSAWQDAAQSWTA*PSIGTP
Trigger: TGGAGTTCCGATACTGGGGCATGCAGTCCAAGATTG...GGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGCTTTCAATCTTGGACTaGATGCCCCAGTATCGGAAC +
Preference number: 4 (lower is better)
Translates to: TKTALLVTLSSAWQDAALLSILD*MPQYRN
Trigger: GTTCCGATACTGGGGCATGCAGTCCAAGATTGAAAG...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGGGATGTCAATGTTGCTaGGGCTCAGGTGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEGCQCC*GSGADC
Trigger: GCAGTCGGCACCTGAGCCGCAGCAACATTGACATCC...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATGTAGCTCTCGGCCATaGCTGACACCTGACTGGCGA +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKCSSRP*LTPDWR
Trigger: TCGCCAGTCAGGTGTCAGGCATGGCCGAGAGCTACA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCATTCATCCACGGTCATTaGCAGGGGAATCCGGTATTC +
Preference number: 4 (lower is better)
Translates to: GSTKTALLVTLSSAWQDAFIHGH*QGNPVF
Trigger: GAATACCGGATTCCCCTGCCAATGACCGTGGATGAA...TGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGTTCATCCACGGTCATTaGCAGGGGAATCCGGTATTC +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVFIHGH*QGNPVF
Trigger: GAATACCGGATTCCCCTGCCAATGACCGTGGATGAA...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGTGTATCATGTACAGCTaGGCAATGCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: KDSFIGHTEFCLAGRSPGCIMYS*AMRYSS
Trigger: GGATGAATACCGCATTGCCCAGCTGTACATGATACA...CCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCAAGTCTTGACTGACTaGAACAGCTTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCQVLTD*NSLGSS
Trigger: AGAAGACCCCAAGCTGTTCCAGTCAGTCAAGACTTG...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAATGCCTGGTCCTTGGTaGCACTGTCCTTGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: GSTKTALLVTLSSAWQDAMPGPW*HCPCLV
Trigger: AACTAAGCAAGGACAGTGCCACCAAGGACCAGGCAT...TGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTAGGACCTTGAGGACTTaGAGGAGGTGGACCACTGCT +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIRTLRT*RRWTTA
Trigger: AGCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCT...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGCTTCGTCGGAGTCCCTaGCGATACTCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQELRRSP*RYSASS
Trigger: GGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAG...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACTTCGTCGGAGTCCCTaGCGATACTCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKLRRSP*RYSASS
Trigger: GGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACCGTTGGAGTTCCACTTaGTCATGTCCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDRWSST*SCPWLV
Trigger: AACAAGCCAAGGACATGACCAAGTGGAACTCCAACG...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTCACTTGCTGACACGCTaGACGCAGCTGGAAAACGTC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIHLLTR*TQLENV
Trigger: GACGTTTTCCAGCTGCGTCCAGCGTGTCAGCAAGTG...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAAGGGGCTGCATGCTCTTaGAAGACTGTGTTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PLLLSVEVGLPQENEPKEGAACS*KTVLWV
Trigger: GACCCACAACACAGTCTTCCAAGAGCATGCAGCCCC...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACTGGGCCCACTGGGCTaGGCCGAGATGGTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTLGPLG*AEMVRS
Trigger: GCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAGATCGTGCCGATGGCTaGGCCCACTGGGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTDRADG*AHWAGP
Trigger: CGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATC...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGTGCCTAGGCGGCTCTTaGTACTTTTCCTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TKTALLVTLSSAWQDAALCLGGS*YFSFFG
Trigger: ACCAAAGAAGGAAAAGTACCAAGAGCCGCCTAGGCA...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTGTAGATTTCATCTTGTaGTTCCTCAGGCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGVDFIL*FLRLRT
Trigger: AGTCCGGAGCCTGAGGAATCACAAGATGAAATCTAC...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTCGTCCAGGGAAGGGATaGCTGTTTTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIRPGKG*LFSSRL
Trigger: TAGCCTTGAGGAAAACAGTCATCCCTTCCCTGGACG...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAACGTCCAGGGAAGGGATaGCTGTTTTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: PLLLSVEVGLPQENEPKERPGKG*LFSSRL
Trigger: TAGCCTTGAGGAAAACAGTCATCCCTTCCCTGGACG...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGTTTCCCCAGTCAGGGTaGCCATGTCTAAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEFPQSG*PCLRAH
Trigger: ATGGGCCCTTAGACATGGTCACCCTGACTGGGGAAA...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGAGCCAGGAATGTGCATaGCCACATGATACACCTTGT +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVSQECA*PHDTPC
Trigger: ACAAGGTGTATCATGTGGGCATGCACATTCCTGGCT...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTCAATCTTGGACTGCATaGCCCAGTATCGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCQSWTA*PSIGTP
Trigger: TGGAGTTCCGATACTGGGGCATGCAGTCCAAGATTG...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCTTTCAATCTTGGACTaGATGCCCCAGTATCGGAAC +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVLSILD*MPQYRN
Trigger: GTTCCGATACTGGGGCATGCAGTCCAAGATTGAAAG...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTGCTCCCCGTTTTTGCTaGCAGGATCAGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIAPRFC*QDQRLF
Trigger: GAACAACCTCTGATCCTGGCAGCAAAAACGGGGAGC...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTGTACAGGTTCTCATGTaGATCGAAGAACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCVQVLM*IEELLF
Trigger: GAAGAGGAGTTCTTCGATGCACATGAGAACCTGTAC...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCCTTGTTTTTCCTCTGTaGAGTACAGGTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSLVFPL*STGSHV
Trigger: CACATGAGAACCTGTACTGCACAGAGGAAAAACAAG...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGTTCTGGAGTCCTCAGTaGCGTTGCTTCGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEFWSPQ*RCFGGC
Trigger: ACATCCCCCGAAGCAACGGCACTGAGGACTCCAGAA...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGTTTTGTCTTCTTGTaGCAGAGACAGTATGGGAAC +
Preference number: 4 (lower is better)
Translates to: TKTALLVTLSSAWQDAALGFVFL*QRQYGN
Trigger: GTTCCCATACTGTCTCTGGCACAAGAAGACAAAACC...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTTGTATCATGTACAGCTaGGCAATGCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCCIMYS*AMRYSS
Trigger: GGATGAATACCGCATTGCCCAGCTGTACATGATACA...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTCAAGTCTTGACTGACTaGAACAGCTTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: YKDSFIGHTEFCLAGRSPQVLTD*NSLGSS
Trigger: AGAAGACCCCAAGCTGTTCCAGTCAGTCAAGACTTG...AGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGCGCAGACCTGTGTCATaGATGAACCTTTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRRRPVS*MNLSIL
Trigger: CAAGATTGAAAGGTTCATCCATGACACAGGTCTGCG...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGCGCAGACCTGTGTCATaGATGAACCTTTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKRRPVS*MNLSIL
Trigger: CAAGATTGAAAGGTTCATCCATGACACAGGTCTGCG...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATACTTGGTCATGTCCTTaGCTTGTTTTTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHTWSCP*LVFPLC
Trigger: GCACAGAGGAAAAACAAGCCAAGGACATGACCAAGT...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTCGTTGGAGTTCCACTTaGTCATGTCCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: YKDSFIGHTEFCLAGRSPRWSST*SCPWLV
Trigger: AACAAGCCAAGGACATGACCAAGTGGAACTCCAACG...AGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCGTTGGAGTTCCACTTaGTCATGTCCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVRWSST*SCPWLV
Trigger: AACAAGCCAAGGACATGACCAAGTGGAACTCCAACG...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAGGGGCTGCATGCTCTTaGAAGACTGTGTTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKGAACS*KTVLWV
Trigger: GACCCACAACACAGTCTTCCAAGAGCATGCAGCCCC...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCACCACAGGAGACAGGTTaGACACATTATTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GSTKTALLVTLSSAWQDAPQETG*THYCFP
Trigger: GGGAAAACAATAATGTGTTCAACCTGTCTCCTGTGG...TGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGTGGTGGCACTGTCCTTaGTTAGTTCTGAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEWWHCP*LVLRGL
Trigger: AAGGCCCCTCAGAACTAAGCAAGGACAGTGCCACCA...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGGCTCCCCGTTTTTGCTaGCAGGATCAGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEAPRFC*QDQRLF
Trigger: GAACAACCTCTGATCCTGGCAGCAAAAACGGGGAGC...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATCCCTGGCGATACTCTaGATCCTCCACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKSLAIL*ILHSEM
Trigger: CATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCGTACAGGTTCTCATGTaGATCGAAGAACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LYKDSFIGHTEFCLAGRSVQVLM*IEELLF
Trigger: GAAGAGGAGTTCTTCGATGCACATGAGAACCTGTAC...GCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTCTTGTTTTTCCTCTGTaGAGTACAGGTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCLVFPL*STGSHV
Trigger: CACATGAGAACCTGTACTGCACAGAGGAAAAACAAG...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAACTGCATTCGCCAGGGTaGCCGGGGACAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FHGILVHKIITALYRTLELHSPG*PGTAGQ
Trigger: CTGACCTGCTGTCCCCGGGCACCCTGGCGAATGCAG...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACTGCATTCGCCAGGGTaGCCGGGGACAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTLHSPG*PGTAGQ
Trigger: CTGACCTGCTGTCCCCGGGCACCCTGGCGAATGCAG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACCTTGCGCAAAGCCATaGGCGTGGCCGTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTPCAKP*AWPCSG
Trigger: CCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCATGTCTGTTATCAGCTaGCTCTTTTCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RLYKDSFIGHTEFCLAGRMSVIS*LFSTGD
Trigger: GTCTCCTGTGGAAAAGAGCCAGCTGATAACAGACAT...GCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGATGTCTGTTATCAGCTaGCTCTTTTCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: WPFSPACVKISHTGLLCVMSVIS*LFSTGD
Trigger: GTCTCCTGTGGAAAAGAGCCAGCTGATAACAGACAT...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACAGATGCCTGGTCCTTaGTGGCACTGTCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKQMPGP*WHCPCL
Trigger: TAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTACTTGGTCATGTCCTTaGCTTGTTTTTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: YKDSFIGHTEFCLAGRSPTWSCP*LVFPLC
Trigger: GCACAGAGGAAAAACAAGCCAAGGACATGACCAAGT...AGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAAGGGCACCAGGCGGATaGCTAGGTGGCCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTRAPGG*LGGLGH
Trigger: GTGCCCTAGGCCACCTAGCCATCCGCCTGGTGCCCT...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTCGCTTCTTGTACTCCTaGATCCAGTTTTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: YKDSFIGHTEFCLAGRSPRFLYS*IQFSER
Trigger: TCTTTCTGAAAACTGGATTCAGGAGTACAAGAAGCG...AGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR TCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAAGTAGATTTCATCTTGTaGTTCCTCAGGCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: PLLLSVEVGLPQENEPKEVDFIL*FLRLRT
Trigger: AGTCCGGAGCCTGAGGAATCACAAGATGAAATCTAC...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTGTAGATTTCATCTTGTaGTTCCTCAGGCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIVDFIL*FLRLRT
Trigger: AGTCCGGAGCCTGAGGAATCACAAGATGAAATCTAC...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAACGCTGGAGGCCACCCTaGACTCAGAGCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: FHGILVHKIITALYRTLERWRPP*TQSHSA
Trigger: AGCAGAGTGGCTCTGAGTTCAGGGTGGCCTCCAGCG...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTCTTGTTTTTCCTCTGTaGAGTACAGGTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: LQMARPEPCSSAPDTVNILVFPL*STGSHV
Trigger: CACATGAGAACCTGTACTGCACAGAGGAAAAACAAG...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp CTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCTTGTTTTTCCTCTGTaGAGTACAGGTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: LYKDSFIGHTEFCLAGRSLVFPL*STGSHV
Trigger: CACATGAGAACCTGTACTGCACAGAGGAAAAACAAG...GCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR GCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAGCTGGGCCGAGATGGTaGGGAGCAGGTGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTAGPRW*GAGDSE
Trigger: CTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGC...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATTCATCCACGGTCATTaGCAGGGGAATCCGGTATTC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKFIHGH*QGNPVF
Trigger: GAATACCGGATTCCCCTGCCAATGACCGTGGATGAA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAACAAGTCTTGACTGACTaGAACAGCTTGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLLSVEVGLPQENEPKEQVLTD*NSLGSS
Trigger: AGAAGACCCCAAGCTGTTCCAGTCAGTCAAGACTTG...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATGTCCAGCTCATAGGTaGACGAGTCACTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKCPAHR*TSHSFC
Trigger: GCAAAAGGAGTGACTCGTCCACCTATGAGCTGGACA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTCCACAGGAGACAGGTTaGACACATTATTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIPQETG*THYCFP
Trigger: GGGAAAACAATAATGTGTTCAACCTGTCTCCTGTGG...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAGCTCTCGGCCATGCCTaGCACCTGACTGGCGATACT +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTALGHA*HLTGDT
Trigger: AGTATCGCCAGTCAGGTGTCAGGCATGGCCGAGAGC...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAAGGTGGTTGCGTCATaGTGTGCACATCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEKVVAS*CAHPPF
Trigger: AAAAGGTGGATGTGCACATCATGACGCAACCACCTT...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACGGGACAGCATGAGCTaGACCTCCCTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTRDSMS*TSLSSS
Trigger: AGAGCTGGAGAGGGAGGTGCAGCTCATGCTGTCCCG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGATCCTCATTGGCAACTaGGTCATTGATCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEILIGN*VIDPVV
Trigger: AACCACCGGATCAATGACGCAGTTGCCAATGAGGAT...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAACAGGTAGGCCGAAGCTaGCCTTGCGCAAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: FHGILVHKIITALYRTLEQVGRS*PCAKPC
Trigger: GCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTG...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTTGTATCATGTACAGCTaGGCAATGCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPICIMYS*AMRYSS
Trigger: GGATGAATACCGCATTGCCCAGCTGTACATGATACA...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAACGTTGGAGTTCCACTTaGTCATGTCCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKRWSST*SCPWLV
Trigger: AACAAGCCAAGGACATGACCAAGTGGAACTCCAACG...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGCGTTGGAGTTCCACTTaGTCATGTCCTTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQERWSST*SCPWLV
Trigger: AACAAGCCAAGGACATGACCAAGTGGAACTCCAACG...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAAGGGGGATGTGGTCCTaGCTGCTAGACAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: FHGILVHKIITALYRTLERGMWS*LLDRQP
Trigger: GGGCTGTCTGTCTAGCAGCCAGGACCACATCCCCCT...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACTGCCTCCTGGTACTaGGGTGAGGAAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FHGILVHKIITALYRTLETASWY*GEEVAS
Trigger: GCTGGCCACTTCCTCACCCCAGTACCAGGAGGCAGT...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACTGCATCCTCCACTCTaGGATGCTATGTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTLHPPL*DAMSGG
Trigger: CCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAACTGCATCCTCCACTCTaGGATGCTATGTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FHGILVHKIITALYRTLELHPPL*DAMSGG
Trigger: CCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAG...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAATCCTCCACTCTGAGATaGTATGTCGGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FHGILVHKIITALYRTLESSTLR*YVGRGW
Trigger: CCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGA...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATGTATCATGTACAGCTaGGCAATGCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: ESELWLPGVDIKRTALRKCIMYS*AMRYSS
Trigger: GGATGAATACCGCATTGCCCAGCTGTACATGATACA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACCTGGTGCTGCTGGATaGTGTCCAGCTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTPGAAG*CPAHRW
Trigger: CCACCTATGAGCTGGACACCATCCAGCAGCACCAGG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACCGTCCGTGATGAACTaGCACTGCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTPSVMN*HCCCSF
Trigger: GAAGCTGCAGCAGCAGTGCCAGTTCATCACGGACGG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGCGCTTCTTGTACTCCTaGATCCAGTTTTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQERFLYS*IQFSER
Trigger: TCTTTCTGAAAACTGGATTCAGGAGTACAAGAAGCG...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACGTCCAGGGAAGGGATaGCTGTTTTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTRPGKG*LFSSRL
Trigger: TAGCCTTGAGGAAAACAGTCATCCCTTCCCTGGACG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAAGAGGTTGTTCCAGATaGCTGGTCCTTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTRGCSR*LVLGGT
Trigger: AGTGCCACCAAGGACCAGGCATCTGGAACAACCTCT...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR GCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAACTAGAGTGTCTAGGTaGAGCCACTCACCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTTRVSR*SHSPEG
Trigger: ACCTTCAGGTGAGTGGCTGCACCTAGACACTCTAGT...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACATGTCCAGCTCATAGGTaGACGAGTCACTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTCPAHR*TSHSFC
Trigger: GCAAAAGGAGTGACTCGTCCACCTATGAGCTGGACA...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACCACAGGAGACAGGTTaGACACATTATTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTPQETG*THYCFP
Trigger: GGGAAAACAATAATGTGTTCAACCTGTCTCCTGTGG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR TCA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACACGCTTCTTGTACTCCTaGATCCAGTTTTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GILVHKIITALYRTLETTRFLYS*IQFSER
Trigger: TCTTTCTGAAAACTGGATTCAGGAGTACAAGAAGCG...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS GCA 90 bp CGCTGGCCCCGCTGCTCGCTGTCCATCTGGGTCTGTGTCCGATCGTaGCGATGGCTGGGCCCACTGGGCTGGGCCGAGATGGTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: RWPRCSLSIWVCVRS*RWLGPLGWAEMVRS
Trigger: GCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGACACAGACCCAGATGGACAGCGAGCAGCGGGGCCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp GAAGCTGCCCTTGCGCAAAGCCATGCGCGTGGCCGTGTTCCGGGCTaGGCGAGCCCGGTGATTGTACTTGAGCTGGGCCAGGTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: EAALAQSHARGRVPG*ASPVIVLELGQVGR
Trigger: GCGGCCCACCTGGCCCAGCTCAAGTACAATCACCGGGCTCGCCCAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp GAGAGCGAAGGAAGTCACTCTGGCCAGGTAGGCCGAAGCTGCCCTTaGGCAAAGCCATGCGCGTGGCCGTGTTCCGGGCTGGGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: ESEGSHSGQVGRSCP*AKPCAWPCSGLGEP
Trigger: GGGCTCGCCCAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCCAGAGTGACTTCCTTCGCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGTGCTGCTGCAGCTTCTaGGTGGGGCGGCCCACAATG +
Preference number: 5 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWCCCSF*VGRPTM
Trigger: CATTGTGGGCCGCCCCACCAAGAAGCTGCAGCAGCA...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp CCCCGGCACCGTCCAGCATCGTGGAACTGCTTGAGCGGCGGGAGCTaGGCTCATTCCTCAGCACGCTGGCGTGGAGGCTGGATAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PRHRPASWNCLSGGS*AHSSARWRGGWIGR
Trigger: CCTTCCTATCCAGCCTCCACGCCAGCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAAGCAGTTCCACGATGCTGGACGGTGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp GCTGCTCGCTGTCCATCTGGGTCTGTGTCCGATCGTGCCGATGGCTaGGCCCACTGGGCTGGGCCGAGATGGTGCGGAGCAGGTGATTCC +
Preference number: 5 (lower is better)
Translates to: AARCPSGSVSDRADG*AHWAGPRWCGAGDS
Trigger: GGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGACACAGACCCAGATGGACAGCGAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 90 bp CGATGGCTGGGCCCACTGGGCTGGGCCGAGATGGTGCGGAGCAGGTaGTTCCGAGAGCGAAGGAAGTCACTCTGGCCAGGTAGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: RWLGPLGWAEMVRSR*FRERRKSLWPGRPK
Trigger: CTTCGGCCTACCTGGCCAGAGTGACTTCCTTCGCTCTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp AGTCACTCTGGCCAGGTAGGCCGAAGCTGCCCTTGCGCAAAGCCATaGGCGTGGCCGTGTTCCGGGCTGGGCGAGCCCGGTGATTGTACT +
Preference number: 5 (lower is better)
Translates to: SHSGQVGRSCPCAKP*AWPCSGLGEPGDCT
Trigger: AGTACAATCACCGGGCTCGCCCAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCCAGAGTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp GATTCCGAGAGCGAAGGAAGTCACTCTGGCCAGGTAGGCCGAAGCTaGCCTTGCGCAAAGCCATGCGCGTGGCCGTGTTCCGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: DSESEGSHSGQVGRS*PCAKPCAWPCSGLG
Trigger: GCCCAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCCAGAGTGACTTCCTTCGCTCTCGGAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp TCCGATCGTGCCGATGGCTGGGCCCACTGGGCTGGGCCGAGATGGTaGGGAGCAGGTGATTCCGAGAGCGAAGGAAGTCACTCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SDRADGWAHWAGPRW*GAGDSESEGSHSGQ
Trigger: CTGGCCAGAGTGACTTCCTTCGCTCTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp GTGTCCGATCGTGCCGATGGCTGGGCCCACTGGGCTGGGCCGAGATaGTGCGGAGCAGGTGATTCCGAGAGCGAAGGAAGTCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: VSDRADGWAHWAGPR*CGAGDSESEGSHSG
Trigger: GCCAGAGTGACTTCCTTCGCTCTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp AGCACATCCGACTCAGAACAGCCCAGGCTCTGGCGGGGCCCATCCTaGCAGGTGAGCGCGGGAACAGGGATACTGGTCTCCAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: STSDSEQPRLWRGPS*QVSAGTGILVSRKL
Trigger: CAGCTTCCTGGAGACCAGTATCCCTGTTCCCGCGCTCACCTGGCAGGATGGGCCCCGCCAGAGCCTGGGCTGTTCTGAGTCGGATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS CCA 90 bp TCTCGAAGTCAAACTTGCCCAGGGCCCCGGCACCGTCCAGCATCGTaGAACTGCTTGAGCGGCGGGAGCTGGGCTCATTCCTCAGCACGC +
Preference number: 5 (lower is better)
Translates to: SRSQTCPGPRHRPAS*NCLSGGSWAHSSAR
Trigger: GCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAAGCAGTTCCACGATGCTGGACGGTGCCGGGGCCCTGGGCAAGTTTGACTTCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp TGTCCATCTGGGTCTGTGTCCGATCGTGCCGATGGCTGGGCCCACTaGGCTGGGCCGAGATGGTGCGGAGCAGGTGATTCCGAGAGCGAA +
Preference number: 5 (lower is better)
Translates to: CPSGSVSDRADGWAH*AGPRWCGAGDSESE
Trigger: TTCGCTCTCGGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGACACAGACCCAGATGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 90 bp CGAGCCTTCGTCGGAGTCCCTGGCGATACTCTGCATCCTCCACTCTaGGATGCTATGTCGGGAGGGGCTGGCTCCCCGCTTGGAGGACCT +
Preference number: 5 (lower is better)
Translates to: RAFVGVPGDTLHPPL*DAMSGGAGSPLGGP
Trigger: AGGTCCTCCAAGCGGGGAGCCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 90 bp CGTGGGTCCTCTTGCGCTGCCACCTTTCCCTGGGCTGTGAAGGCGTaGACACGGACACCTCCTTGCCGTCCAGCTCTAGGATGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: RGSSCAATFPWAVKA*TRTPPCRPALGCSS
Trigger: GCTCGAGCATCCTAGAGCTGGACGGCAAGGAGGTGTCCGTGTTCACGCCTTCACAGCCCAGGGAAAGGTGGCAGCGCAAGAGGACCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 90 bp GGCCCGTCACAACCTGCGGGCCATCCTCATTGGCAACTGCGTCATTaGTCCGGTGGTTGGCTGCCACGTTCCGCAGCTTCACGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: GPSQPAGHPHWQLRH*SGGWLPRSAASRGS
Trigger: GGACCCACGTGAAGCTGCGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCCGCAGGTTGTGACGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp GGCGCGGCTAGTGGCTGGCTCACCTCATCCTCGATGATGTTCAGCTaGTCCACGCTGGAGGCCACCCTGAACTCAGAGCCACTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GAASGWLTSSSMMFS*STLEATLNSEPLCW
Trigger: CCAGCAGAGTGGCTCTGAGTTCAGGGTGGCCTCCAGCGTGGAGCAGCTGAACATCATCGAGGATGAGGTGAGCCAGCCACTAGCCGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp TGGTTGGCTGCCACGTTCCGCAGCTTCACGTGGGTCCTCTTGCGCTaGCACCTTTCCCTGGGCTGTGAAGGCGTGAACACGGACACCTCC +
Preference number: 5 (lower is better)
Translates to: WLAATFRSFTWVLLR*HLSLGCEGVNTDTS
Trigger: GGAGGTGTCCGTGTTCACGCCTTCACAGCCCAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGAAGCTGCGGAACGTGGCAGCCAACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGGGTCCCCGGCAAGTCTaGACTGACTGGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: TEQDAQECLPGWARRPILGPRQV*TDWNSL
Trigger: CAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGACC...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCCGGGGGATGTCAATGTaGCTGCGGCTCAGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSRGMSM*LRLRCR
Trigger: TCGGCACCTGAGCCGCAGCAACATTGACATCCCCCG...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCATTCACGTGGGTCCTCTaGCGCTGCCACCTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SSCPRWATKSQLCTWLASFTWVL*RCHLSL
Trigger: CAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGAA...TGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCTGCTGCTGCAGCTTCTaGGTGGGGCGGCCCACAATG +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSCCCSF*VGRPTM
Trigger: CATTGTGGGCCGCCCCACCAAGAAGCTGCAGCAGCA...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 90 bp GGTGACGAGGGGGCTGCATGCTCTTGGAAGACTGTGTTGTGGGTCTaGAGCACATCCGACTCAGAACAGCCCAGGCTCTGGCGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: GDEGAACSWKTVLWV*STSDSEQPRLWRGP
Trigger: TGGGCCCCGCCAGAGCCTGGGCTGTTCTGAGTCGGATGTGCTTCAGACCCACAACACAGTCTTCCAAGAGCATGCAGCCCCCTCGTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS GCA 90 bp CTTCGTCGGAGTCCCTGGCGATACTCTGCATCCTCCACTCTGAGATaGTATGTCGGGAGGGGCTGGCTCCCCGCTTGGAGGACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LRRSPWRYSASSTLR*YVGRGWLPAWRTLR
Trigger: CCTCAAGGTCCTCCAAGCGGGGAGCCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGACCCGCAAGGCTGCTTaGGGCAAGATGGAGCGAAAC +
Preference number: 5 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLTRKAA*GKMERN
Trigger: GTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGT...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGACCCGCAAGGCTGCTTaGGGCAAGATGGAGCGAAAC +
Preference number: 5 (lower is better)
Translates to: CPRWATKSQLCTWLASHLTRKAA*GKMERN
Trigger: GTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGT...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGGGTCCCCGGCAAGTCTaGACTGACTGGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: TARSDISSGTALSSGWGRGPRQV*TDWNSL
Trigger: CAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGACC...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGGCCTCACACCTGCCAGATGCCTGGTCCTaGGTGGCACTGTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: CPRWATKSQLCTWLASHLPDAWS*VALSLL
Trigger: AAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGG...CAGGTGTGAGGCCAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGAGGACCTTGAGGACTaGGAGGAGGTGGACCACTGC +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSEDLED*EEVDHC
Trigger: GCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCTC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GCCCCTGAGCAGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCACTTGGTCATGTCCTaGGCTTGTTTTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: APEQAGASVEARLLQVQLHLVMS*ACFSSV
Trigger: CACAGAGGAAAAACAAGCCAAGGACATGACCAAGTG...CAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCTGCTCAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp AGGCGGGAGCGTCGGTGGAGGCCAGGCTTCTCCAGGTCCAGCTGCCCAAGGTGGTCGTTGGAGTTCCACTaGGTCATGTCCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: RRERRWRPGFSRSSCPRWSLEFH*VMSLAC
Trigger: ACAAGCCAAGGACATGACCAAGTGGAACTCCAACGA...CCACCTTGGGCAGCTGGACCTGGAGAAGCCTGGCCTCCACCGACGCTCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCTCGGCGGCTACTGCTTaGACTCTCAGACACTGGCTG +
Preference number: 5 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVSAATA*TLRHWL
Trigger: CAGCCAGTGTCTGAGAGTCAAAGCAGTAGCCGCCGA...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAGAGTCCTCAGTGCCGTaGCTTCGGGGGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: QGPQARLSGALSQCWVFLESSVP*LRGMSM
Trigger: CATTGACATCCCCCGAAGCAACGGCACTGAGGACTC...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTTTGGCAACTGCGTCATaGATCCGGTGGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVALATAS*IRWLAA
Trigger: GGCAGCCAACCACCGGATCAATGACGCAGTTGCCAA...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTATTGGCAACTGCGTCATaGATCCGGTGGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: QGPQARLSGALSQCWVFLLATAS*IRWLAA
Trigger: GGCAGCCAACCACCGGATCAATGACGCAGTTGCCAA...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTCAGGCCATGTCTGTGCATGTCCCCAGCCACTGACGTGTGTGCCCAGGCCAGGTTGGCAACTGCGTCATaGATCCGGTGGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LRPCLCMSPATDVCAQARLATAS*IRWLAA
Trigger: GGCAGCCAACCACCGGATCAATGACGCAGTTGCCAA...CCTGGCCTGGGCACACACGTCAGTGGCTGGGGACATGCACAGACATGGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGACGCGCCCACTGCTGTaGGTCACTAGAGTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLTRPLL*VTRVSR
Trigger: CCTAGACACTCTAGTGACCAACAGCAGTGGGCGCGT...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCTGGGGCTCACCTGCCTaGCCCTGGCACGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSWGSPA*PWHGDP
Trigger: AGGGTCCCCGTGCCAGGGCAAGGCAGGTGAGCCCCA...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS GCA 90 bp CATGAACCGGCCCGTCACAACCTGCGGGCCATCCTCATTGGCAACTaGGTCATTGATCCGGTGGTTGGCTGCCACGTTCCGCAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: HEPARHNLRAILIGN*VIDPVVGCHVPQLH
Trigger: GTGAAGCTGCGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCCGCAGGTTGTGACGGGCCGGTTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACAGAAAACTGGGCCATTTaGCGGGACAGCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTENWAI*RDSMSC
Trigger: GCAGCTCATGCTGTCCCGCAAAATGGCCCAGTTTTC...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CAAGGCTGGGAGGGCTGTGTTGGCATGGCCATGTCTTCCAAGGGGCCCTGGGTCTGCCAGGATCAGAGGTaGTTCCAGATGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: QGWEGCVGMAMSSKGPWVCQDQR*FQMPGP
Trigger: AGGACCAGGCATCTGGAACAACCTCTGATCCTGGCA...GACCCAGGGCCCCTTGGAAGACATGGCCATGCCAACACAGCCCTCCCAGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCTCGGCGGCTACTGCTTaGACTCTCAGACACTGGCTG +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSSAATA*TLRHWL
Trigger: CAGCCAGTGTCTGAGAGTCAAAGCAGTAGCCGCCGA...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCACGCGCCCACTGCTGTaGGTCACTAGAGTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSTRPLL*VTRVSR
Trigger: CCTAGACACTCTAGTGACCAACAGCAGTGGGCGCGT...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GTGGACGGGTGGGTAGCAGTCTGGGACTGCCACTGGGCTGCCGTGGTGTCAACATTCAGAAAGTTAGCCTaGTGGCGCAGTGGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: VDGWVAVWDCHWAAVVSTFRKLA*WRSGSC
Trigger: GCACGACCCACTGCGCCACAAGGCTAACTTTCTGAA...TGTTGACACCACGGCAGCCCAGTGGCAGTCCCAGACTGCTACCCACCCGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGTTCAGAAAGTTAGCCTaGTGGCGCAGTGGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLFRKLA*WRSGSC
Trigger: GCACGACCCACTGCGCCACAAGGCTAACTTTCTGAA...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAATGCTGGGGGTGTGGTaGAGCGACGAGGGACCCTTC +
Preference number: 5 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVMLGVW*SDEGPF
Trigger: GAAGGGTCCCTCGTCGCTCAACCACACCCCCAGCAT...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS TCA 90 bp CCTCCTTGCCGTCCAGCTCTAGGATGCTCGAGCTGTCGTGCCGCATaGCCTGTCTCAGCAGAAAGGAGACCACGTCGGTTGACTCCCAGT +
Preference number: 5 (lower is better)
Translates to: PPCRPALGCSSCRAA*PVSAERRPRRLTPS
Trigger: ACTGGGAGTCAACCGACGTGGTCTCCTTTCTGCTGAGACAGGTCATGCGGCACGACAGCTCGAGCATCCTAGAGCTGGACGGCAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp AAGAACTCCTCTTCCGAGCCTTCGTCGGAGTCCCTGGCGATACTCTaGATCCTCCACTCTGAGATGCTATGTCGGGAGGGGCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: KNSSSEPSSESLAIL*ILHSEMLCREGLAP
Trigger: GGGAGCCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAGGCTCGGAAGAGGAGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp ACGGACACCTCCTTGCCGTCCAGCTCTAGGATGCTCGAGCTGTCGTaGCGCATGACCTGTCTCAGCAGAAAGGAGACCACGTCGGTTGAC +
Preference number: 5 (lower is better)
Translates to: TDTSLPSSSRMLELS*RMTCLSRKETTSVD
Trigger: GTCAACCGACGTGGTCTCCTTTCTGCTGAGACAGGTCATGCGGCACGACAGCTCGAGCATCCTAGAGCTGGACGGCAAGGAGGTGTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCACCAGATGCCTGGTCCTaGGTGGCACTGTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LELHGLSQCREGAGEVWSPDAWS*VALSLL
Trigger: AAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGG...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGGAGGACCTTGAGGACTaGGAGGAGGTGGACCACTGC +
Preference number: 5 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEEDLED*EEVDHC
Trigger: GCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCTC...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGTCGTTGGAGTTCCACTaGGTCATGTCCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: TEQDAQECLPGWARRPILSLEFH*VMSLAC
Trigger: ACAAGCCAAGGACATGACCAAGTGGAACTCCAACGA...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGTCCGGACTCTCCATTTaGTCCATGAGGTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TARSDISSGTALSSGWGRSGLSI*SMRSLE
Trigger: CTCCAACGACCTCATGGACAAAATGGAGAGTCCGGA...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGCTAGGCGGCCGATCCTGACGGTGTCGAACACGTaGGTGATAGTATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: TEQDAQECLPGWARRPILTVSNT*VIVLVS
Trigger: GGACACCAATACTATCACCAACGTGTTCGACACCGT...CAGGATCGGCCGCCTAGCCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTGGCTCCTCTTCCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGCGGGGGATGTCAATGTaGCTGCGGCTCAGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: LAPLPSWAGHPARSHNQLRGMSM*LRLRCR
Trigger: TCGGCACCTGAGCCGCAGCAACATTGACATCCCCCG...CAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGGAAGAGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACGAGTCCTCAGTGCCGTaGCTTCGGGGGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHESSVP*LRGMSM
Trigger: CATTGACATCCCCCGAAGCAACGGCACTGAGGACTC...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGAAGAGGTTGTACACTaGCTGACACGCTGGACGCAG +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSEEVVH*LTRWTQ
Trigger: CTGCGTCCAGCGTGTCAGCAAGTGTACAACCTCTTC...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTTCTGTCCCCACCACTaGGCAGCAATCTGGGCGATG +
Preference number: 5 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHFCPHH*AAIWAM
Trigger: CATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGAA...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTATCATTGATCCGGTGGTaGGCTGCCACGTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVSLIRW*AATFRS
Trigger: GCTGCGGAACGTGGCAGCCAACCACCGGATCAATGA...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCTTCAGAAAGTTAGCCTaGTGGCGCAGTGGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSFRKLA*WRSGSC
Trigger: GCACGACCCACTGCGCCACAAGGCTAACTTTCTGAA...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp CCCCCAGGCGGTGTGTTTCTGGAATGGTGTAGGAGACGCGCCCACTaGTGTTGGTCACTAGAGTGTCTAGGTGCAGCCACTCACCTGAAG +
Preference number: 5 (lower is better)
Translates to: PPGGVFLEWCRRRAH*CWSLECLGAATHLK
Trigger: CTTCAGGTGAGTGGCTGCACCTAGACACTCTAGTGACCAACAGCAGTGGGCGCGTCTCCTACACCATTCCAGAAACACACCGCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp TGGATAGGAAGGCCTGGTGCTGCTGGATGGTGTCCAGCTCATAGGTaGACGAGTCACTCCTTTTGCGGGGCAGCTGCCTTCTGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: WIGRPGAAGWCPAHR*TSHSFCGAAAFWSP
Trigger: AGGACTCCAGAAGGCAGCTGCCCCGCAAAAGGAGTGACTCGTCCACCTATGAGCTGGACACCATCCAGCAGCACCAGGCCTTCCTATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAGAAAACTGGGCCATTTaGCGGGACAGCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LELHGLSQCREGAGEVWSENWAI*RDSMSC
Trigger: GCAGCTCATGCTGTCCCGCAAAATGGCCCAGTTTTC...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCCAGATGCCTGGTCCTaGGTGGCACTGTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEPDAWS*VALSLL
Trigger: AAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTGACGGTGTCGAACACGTaGGTGATAGTATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SRSSCPRWATKSQLCTWLTVSNT*VIVLVS
Trigger: GGACACCAATACTATCACCAACGTGTTCGACACCGT...CAGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTTCATTGATCCGGTGGTaGGCTGCCACGTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGSLIRW*AATFRS
Trigger: GCTGCGGAACGTGGCAGCCAACCACCGGATCAATGA...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGTTCTGTCCCCACCACTaGGCAGCAACTTCTCCGATG +
Preference number: 5 (lower is better)
Translates to: EAERSTRSKMPRNASQAGFCPHH*AATSPM
Trigger: CATCGGAGAAGTTGCTGCCAAGTGGTGGGGACAGAA...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS-3UTR CAA 90 bp CTCCAGGTCCAGCTGCCCAAGGTGGGCTACCAAGAGCCAGCTGTGCACGTGGCTACTGACTGGAACAGCTaGGGGTCTTCTTCTGTCTTA +
Preference number: 5 (lower is better)
Translates to: LQVQLPKVGYQEPAVHVATDWNS*GSSSVL
Trigger: TAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAGT...AGCCACGTGCACAGCTGGCTCTTGGTAGCCCACCTTGGGCAGCTGGACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GGCCCTGCATCTGAGTCTGGCCTGGCAGACTCAGGCACAGAGCCCCATCGCTGGATGAACCTTTCAATCTaGGACTGCATGCCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: GPASESGLADSGTEPHRWMNLSI*DCMPQY
Trigger: ATACTGGGGCATGCAGTCCAAGATTGAAAGGTTCAT...CCAGCGATGGGGCTCTGTGCCTGAGTCTGCCAGGCCAGACTCAGATGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCACGAAAACTGGGCCATTTaGCGGGACAGCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TALLVTLSSAWQDAALGHENWAI*RDSMSC
Trigger: GCAGCTCATGCTGTCCCGCAAAATGGCCCAGTTTTC...GTGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp AAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCCAGATGCCTGGTCCTaGGTGGCACTGTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KTALLVTLSSAWQDAALGPDAWS*VALSLL
Trigger: AAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGG...GCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp GACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCATGCCAGGATCAGAGGTaGTTCCAGATGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: DSFIGHTEFCLAGRSPGPCQDQR*FQMPGP
Trigger: AGGACCAGGCATCTGGAACAACCTCTGATCCTGGCA...TGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGTGCCAGGATCAGAGGTaGTTCCAGATGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: GPVTVLGVPNVAGCADTECQDQR*FQMPGP
Trigger: AGGACCAGGCATCTGGAACAACCTCTGATCCTGGCA...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp AAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGGAGGACCTTGAGGACTaGGAGGAGGTGGACCACTGC +
Preference number: 5 (lower is better)
Translates to: KDSFIGHTEFCLAGRSPGEDLED*EEVDHC
Trigger: GCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCTC...CCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGGGTCATGTCCTTGGCTaGTTTTTCCTCTGTGCAGTA +
Preference number: 5 (lower is better)
Translates to: TARSDISSGTALSSGWGRGHVLG*FFLCAV
Trigger: TACTGCACAGAGGAAAAACAAGCCAAGGACATGACC...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CAGGTGGTTGGTGATGGGTGGCATCAAGGCTCAGTCCTGGGGACTGGGGATGGGTCGTTGGAGTTCCACTaGGTCATGTCCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: QVVGDGWHQGSVLGTGDGSLEFH*VMSLAC
Trigger: ACAAGCCAAGGACATGACCAAGTGGAACTCCAACGA...CCCATCCCCAGTCCCCAGGACTGAGCCTTGATGCCACCCATCACCAACCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CGTGGCTGGCCTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCACGGTGTCGAACACGTaGGTGATAGTATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: RGWPHTCAVLTARSDISSTVSNT*VIVLVS
Trigger: GGACACCAATACTATCACCAACGTGTTCGACACCGT...GGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAGGCCAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATCGGGGGATGTCAATGTaGCTGCGGCTCAGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHRGMSM*LRLRCR
Trigger: TCGGCACCTGAGCCGCAGCAACATTGACATCCCCCG...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTGAGTCCTCAGTGCCGTaGCTTCGGGGGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGESSVP*LRGMSM
Trigger: CATTGACATCCCCCGAAGCAACGGCACTGAGGACTC...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGTTCTGTCCCCACCACTaGGCAGCAATCTGGGCGATG +
Preference number: 5 (lower is better)
Translates to: PSWAGHPARSHNQLGSLEFCPHH*AAIWAM
Trigger: CATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGAA...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACATTCACGTGGGTCCTCTaGCGCTGCCACCTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTFTWVL*RCHLSL
Trigger: CAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGAA...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCATCATGGGCTGGACATCCTGCCAGATCCCATAACCAGCTGGGCTCCTTAGAGTTGGCAACTGCGTCATaGATCCGGTGGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PSWAGHPARSHNQLGSLELATAS*IRWLAA
Trigger: GGCAGCCAACCACCGGATCAATGACGCAGTTGCCAA...CTCTAAGGAGCCCAGCTGGTTATGGGATCTGGCAGGATGTCCAGCCCATGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp CACAATGTAGATGTGCATGGGAGAGAGGCTGATGGAGTTATAGACTaGGACATCCTTCGTGGAGCCGTAGGCCGCATGTGCGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: HNVDVHGREADGVID*DILRGAVGRMCAQV
Trigger: CACCTGCGCGCACATGCGGCCTACGGCTCCACGAAGGATGTCGCAGTCTATAACTCCATCAGCCTCTCTCCCATGCACATCTACATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp CATTCCAGGACTCCTCCACCACCCGCAAGGCTGCTTTGGGCAAGATaGAGCGAAACCAGCCAGGAATGTGCATGCCCACATGATACACCT +
Preference number: 5 (lower is better)
Translates to: HSRTPPPPARLLWAR*SETSQECACPHDTP
Trigger: AGGTGTATCATGTGGGCATGCACATTCCTGGCTGGTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTGGAGGAGTCCTGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp CATGTGCATCGAAGAACTCCTCTTCCGAGCCTTCGTCGGAGTCCCTaGCGATACTCTGCATCCTCCACTCTGAGATGCTATGTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: HVHRRTPLPSLRRSP*RYSASSTLRCYVGR
Trigger: CCTCCCGACATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAGGCTCGGAAGAGGAGTTCTTCGATGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 90 bp GGCGGTGTGTTTCTGGAATGGTGTAGGAGACGCGCCCACTGCTGTTaGTCACTAGAGTGTCTAGGTGCAGCCACTCACCTGAAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: GGVFLEWCRRRAHCC*SLECLGAATHLKVV
Trigger: AACCACCTTCAGGTGAGTGGCTGCACCTAGACACTCTAGTGACCAACAGCAGTGGGCGCGTCTCCTACACCATTCCAGAAACACACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGATTCATCCACGGTCATaGGCAGGGGAATCCGGTATT +
Preference number: 5 (lower is better)
Translates to: EAERSTRSKMPRNASQAGIHPRS*AGESGI
Trigger: AATACCGGATTCCCCTGCCAATGACCGTGGATGAAT...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTCACACCTGTGCTGTGCTCACAGCCCGGAGTGACATCAGTTCCGGGACTGCACATTCATCCACGGTCATaGGCAGGGGAATCCGGTATT +
Preference number: 5 (lower is better)
Translates to: LTPVLCSQPGVTSVPGLHIHPRS*AGESGI
Trigger: AATACCGGATTCCCCTGCCAATGACCGTGGATGAAT...GTGCAGTCCCGGAACTGATGTCACTCCGGGCTGTGAGCACAGCACAGGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ATGTCTTCCAAGGGGCCCTGGGTCGCTCTCAGGCCATGTCTGTGCATGTCCCCAATTCATCCACGGTCATaGGCAGGGGAATCCGGTATT +
Preference number: 5 (lower is better)
Translates to: MSSKGPWVALRPCLCMSPIHPRS*AGESGI
Trigger: AATACCGGATTCCCCTGCCAATGACCGTGGATGAAT...TGGGGACATGCACAGACATGGCCTGAGAGCGACCCAGGGCCCCTTGGAAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGATGAACCTTTCAATCTaGGACTGCATGCCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: TARSDISSGTALSSGWGRMNLSI*DCMPQY
Trigger: ATACTGGGGCATGCAGTCCAAGATTGAAAGGTTCAT...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGTCGTTGGAGTTCCACTaGGTCATGTCCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: EAERSTRSKMPRNASQAGSLEFH*VMSLAC
Trigger: ACAAGCCAAGGACATGACCAAGTGGAACTCCAACGA...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAGAGTCCTCAGTGCCGTaGCTTCGGGGGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTESSVP*LRGMSM
Trigger: CATTGACATCCCCCGAAGCAACGGCACTGAGGACTC...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTTTCACGTGGGTCCTCTaGCGCTGCCACCTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCFTWVL*RCHLSL
Trigger: CAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGAA...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCACCTGCCTAGGCGGCTCTaGGTACTTTTCCTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: TALLVTLSSAWQDAALGHLPRRL*VLFLLW
Trigger: CCAAAGAAGGAAAAGTACCAAGAGCCGCCTAGGCAG...GTGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS CCA 90 bp AAGCTCAGAGATGAGCAGCTTCAGAAAGTTAGCCTTGTGGCGCAGTaGGTCGTGCACCAGGCCATCACAGAAGGACACCACACCATGAGG +
Preference number: 5 (lower is better)
Translates to: KLRDEQLQKVSLVAQ*VVHQAITEGHHTMR
Trigger: CCTCATGGTGTGGTGTCCTTCTGTGATGGCCTGGTGCACGACCCACTGCGCCACAAGGCTAACTTTCTGAAGCTGCTCATCTCTGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAGCCCGGAGTGACATCAGTTCCGGGACTGCACTGAGCTCTGGGTGGGGCAGGAGGTTGAACACATTATaGTTTTCCCCAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TARSDISSGTALSSGWGRRLNTL*FSPVSV
Trigger: GACAGACACTGGGGAAAACAATAATGTGTTCAACCT...CCTGCCCCACCCAGAGCTCAGTGCAGTCCCGGAACTGATGTCACTCCGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CAGGGCCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTATCCACAGGAGACAGGTaGAACACATTATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: QGPQARLSGALSQCWVFLSTGDR*NTLLFS
Trigger: GGAAAACAATAATGTGTTCAACCTGTCTCCTGTGGA...TAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATGTGGTCCCCGGCAAGTCTaGACTGACTGGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: DRPWPGSAETGFSCMSTCGPRQV*TDWNSL
Trigger: CAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGACC...ACATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTGAGGACCTTGAGGACTaGGAGGAGGTGGACCACTGC +
Preference number: 5 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIEDLED*EEVDHC
Trigger: GCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCTC...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GAGGCTGAGAGATCAACACGGAGCAAGATGCCCAGGAATGCCTCCCAGGCTGGGGGTCATGTCCTTGGCTaGTTTTTCCTCTGTGCAGTA +
Preference number: 5 (lower is better)
Translates to: EAERSTRSKMPRNASQAGGHVLG*FFLCAV
Trigger: TACTGCACAGAGGAAAAACAAGCCAAGGACATGACC...CCCAGCCTGGGAGGCATTCCTGGGCATCTTGCTCCGTGTTGATCTCTCAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCGAAGAGGTTGTACACTaGCTGACACGCTGGACGCAG +
Preference number: 5 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSEEVVH*LTRWTQ
Trigger: CTGCGTCCAGCGTGTCAGCAAGTGTACAACCTCTTC...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAGAAGAGGTTGTACACTaGCTGACACGCTGGACGCAG +
Preference number: 5 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTEEVVH*LTRWTQ
Trigger: CTGCGTCCAGCGTGTCAGCAAGTGTACAACCTCTTC...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGACGCGCCCACTGCTGTaGGTCACTAGAGTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRTRPLL*VTRVSR
Trigger: CCTAGACACTCTAGTGACCAACAGCAGTGGGCGCGT...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCACCCGCAAGGCTGCTTaGGGCAAGATGGAGCGAAAC +
Preference number: 5 (lower is better)
Translates to: STKTALLVTLSSAWQDAATRKAA*GKMERN
Trigger: GTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGT...GGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTACCCGCAAGGCTGCTTaGGGCAAGATGGAGCGAAAC +
Preference number: 5 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGTRKAA*GKMERN
Trigger: GTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGT...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGGTCCCCGGCAAGTCTaGACTGACTGGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: GSTKTALLVTLSSAWQDAGPRQV*TDWNSL
Trigger: CAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGACC...TGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp CAGCATGGGGTGGGGACAGGACACAGTTTACACAATGGTCGGGAGAAACAAGACGAAAACTGGGCCATTTaGCGGGACAGCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QHGVGTGHSLHNGREKQDENWAI*RDSMSC
Trigger: GCAGCTCATGCTGTCCCGCAAAATGGCCCAGTTTTC...GTCTTGTTTCTCCCGACCATTGTGTAAACTGTGTCCTGTCCCCACCCCATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGCCAGATGCCTGGTCCTaGGTGGCACTGTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: WPFSPACVKISHTGLLCVPDAWS*VALSLL
Trigger: AAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGG...CACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGAGGACCTTGAGGACTaGGAGGAGGTGGACCACTGC +
Preference number: 5 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCEDLED*EEVDHC
Trigger: GCAGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCTC...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCCACAGGCCAGACTGAGTGGGGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGGTCATGTCCTTGGCTaGTTTTTCCTCTGTGCAGTA +
Preference number: 5 (lower is better)
Translates to: PTGQTEWGPVTVLGVPNVGHVLG*FFLCAV
Trigger: TACTGCACAGAGGAAAAACAAGCCAAGGACATGACC...TACATTAGGAACACCCAGCACTGTGACAGGGCCCCACTCAGTCTGGCCTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GGCCCTGTCACAGTGCTGGGTGTTCCTAATGTAGCAGGCTGCGCTGACACTGAGCACTTGGTCATGTCCTaGGCTTGTTTTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GPVTVLGVPNVAGCADTEHLVMS*ACFSSV
Trigger: CACAGAGGAAAAACAAGCCAAGGACATGACCAAGTG...CTCAGTGTCAGCGCAGCCTGCTACATTAGGAACACCCAGCACTGTGACAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCTCCGGACTCTCCATTTaGTCCATGAGGTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSSGLSI*SMRSLE
Trigger: CTCCAACGACCTCATGGACAAAATGGAGAGTCCGGA...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TTACAAATGGCCAGGCCTGAGCCCTGCAGCTCAGCACCTGACACTGTAAACATTTTCTGTCCCCACCACTaGGCAGCAATCTGGGCGATG +
Preference number: 5 (lower is better)
Translates to: LQMARPEPCSSAPDTVNIFCPHH*AAIWAM
Trigger: CATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGAA...AATGTTTACAGTGTCAGGTGCTGAGCTGCAGGGCTCAGGCCTGGCCATTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTTTCACGTGGGTCCTCTaGCGCTGCCACCTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCFTWVL*RCHLSL
Trigger: CAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGAA...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp CATGTCCTTGGCTTGTTTTTCCTCTGTGCAGTACAGGTTCTCATGTaGATCGAAGAACTCCTCTTCCGAGCCTTCGTCGGAGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: HVLGLFFLCAVQVLM*IEELLFRAFVGVPG
Trigger: GCCAGGGACTCCGACGAAGGCTCGGAAGAGGAGTTCTTCGATGCACATGAGAACCTGTACTGCACAGAGGAAAAACAAGCCAAGGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTGGAGCTCCATGGGCTCAGCCAATGCAGGGAAGGTGCAGGAGAGGTGTGGTCAAGGTTGAACACATTATaGTTTTCCCCAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LELHGLSQCREGAGEVWSRLNTL*FSPVSV
Trigger: GACAGACACTGGGGAAAACAATAATGTGTTCAACCT...TGACCACACCTCTCCTGCACCTTCCCTGCATTGGCTGAGCCCATGGAGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCTAAGAGCCCCACCCACCCCAGAATAGGAAGTCAGTGGAATTGTGGGCCAGGTCACTTGGTCATGTCCTaGGCTTGTTTTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PKSPTHPRIGSQWNCGPGHLVMS*ACFSSV
Trigger: CACAGAGGAAAAACAAGCCAAGGACATGACCAAGTG...ACCTGGCCCACAATTCCACTGACTTCCTATTCTGGGGTGGGTGGGGCTCTTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGTCCGGACTCTCCATTTaGTCCATGAGGTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TKTALLVTLSSAWQDAALSGLSI*SMRSLE
Trigger: CTCCAACGACCTCATGGACAAAATGGAGAGTCCGGA...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATTCCGGACTCTCCATTTaGTCCATGAGGTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHSGLSI*SMRSLE
Trigger: CTCCAACGACCTCATGGACAAAATGGAGAGTCCGGA...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTTCATTGATCCGGTGGTaGGCTGCCACGTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPISLIRW*AATFRS
Trigger: GCTGCGGAACGTGGCAGCCAACCACCGGATCAATGA...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGTGCTGCTGCAGCTTCTaGGTGGGGCGGCCCACAATG +
Preference number: 5 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQECCCSF*VGRPTM
Trigger: CATTGTGGGCCGCCCCACCAAGAAGCTGCAGCAGCA...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS TCA 90 bp GGCCACCCTGAACTCAGAGCCACTCTGCTGGTAGATTTCATCTTGTaGTTCCTCAGGCTCCGGACTCTCCATTTTGTCCATGAGGTCGTT +
Preference number: 5 (lower is better)
Translates to: GHPELRATLLVDFIL*FLRLRTLHFVHEVV
Trigger: AACGACCTCATGGACAAAATGGAGAGTCCGGAGCCTGAGGAATCACAAGATGAAATCTACCAGCAGAGTGGCTCTGAGTTCAGGGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 90 bp GGGTCTCATTCCGGCTCTTCTTCTGTATCATGTACAGCTGGGCAATaGGGTATTCATCCACGGTCATTGGCAGGGGAATCCGGTATTCCT +
Preference number: 5 (lower is better)
Translates to: GSHSGSSSVSCTAGQ*GIHPRSLAGESGIP
Trigger: AGGAATACCGGATTCCCCTGCCAATGACCGTGGATGAATACCGCATTGCCCAGCTGTACATGATACAGAAGAAGAGCCGGAATGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161644.3
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGATTCATCCACGGTCATaGGCAGGGGAATCCGGTATT +
Preference number: 5 (lower is better)
Translates to: TKTALLVTLSSAWQDAALIHPRS*AGESGI
Trigger: AATACCGGATTCCCCTGCCAATGACCGTGGATGAAT...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp CTGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGATTCATCCACGGTCATaGGCAGGGGAATCCGGTATT +
Preference number: 5 (lower is better)
Translates to: LESTRSGLDPLEPLPNGKIHPRS*AGESGI
Trigger: AATACCGGATTCCCCTGCCAATGACCGTGGATGAAT...CTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCCATCCACAGGAGACAGGTaGAACACATTATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: DSFIGHTEFCLAGRSPGPSTGDR*NTLLFS
Trigger: GGAAAACAATAATGTGTTCAACCTGTCTCCTGTGGA...TGGCCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAACTGACTGGAACAGCTaGGGGTCTTCTTCTGTCTTA +
Preference number: 5 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTTDWNS*GSSSVL
Trigger: TAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAGT...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCGGTCATGTCCTTGGCTaGTTTTTCCTCTGTGCAGTA +
Preference number: 5 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSGHVLG*FFLCAV
Trigger: TACTGCACAGAGGAAAAACAAGCCAAGGACATGACC...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp AAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGGGCACTTGGTCATGTCCTaGGCTTGTTTTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: KDSFIGHTEFCLAGRSPGHLVMS*ACFSSV
Trigger: CACAGAGGAAAAACAAGCCAAGGACATGACCAAGTG...CCCAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp GTCCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACTTGGTCATGTCCTaGGCTTGTTTTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VPHACAVHSYTAESVSPVHLVMS*ACFSSV
Trigger: CACAGAGGAAAAACAAGCCAAGGACATGACCAAGTG...TACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGGAGTCAACAAGAAGTGGACTGGACCCATTGGAGCCGCTACCAAATGGGAAGGACGGTGTCGAACACGTaGGTGATAGTATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: WSQQEVDWTHWSRYQMGRTVSNT*VIVLVS
Trigger: GGACACCAATACTATCACCAACGTGTTCGACACCGT...CCTTCCCATTTGGTAGCGGCTCCAATGGGTCCAGTCCACTTCTTGTTGACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTTCGGCGGCTACTGCTTaGACTCTCAGACACTGGCTG +
Preference number: 5 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPISAATA*TLRHWL
Trigger: CAGCCAGTGTCTGAGAGTCAAAGCAGTAGCCGCCGA...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGACCCGCAAGGCTGCTTaGGGCAAGATGGAGCGAAAC +
Preference number: 5 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQETRKAA*GKMERN
Trigger: GTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGT...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GTGACAGGCCCTGGCCTGGGTCAGCAGAGACTGGATTTTCATGCATGTCAACATACTGACTGGAACAGCTaGGGGTCTTCTTCTGTCTTA +
Preference number: 5 (lower is better)
Translates to: VTGPGLGQQRLDFHACQHTDWNS*GSSSVL
Trigger: TAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAGT...ATGTTGACATGCATGAAAATCCAGTCTCTGCTGACCCAGGCCAGGGCCTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGGGTCCCCGGCAAGTCTaGACTGACTGGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEGPRQV*TDWNSL
Trigger: CAAGCTGTTCCAGTCAGTCAAGACTTGCCGGGGACC...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCCACACGCCTGTGCTGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACAATGAACCTTTCAATCTaGGACTGCATGCCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: PTRLCCTQLHSRVSVSCTMNLSI*DCMPQY
Trigger: ATACTGGGGCATGCAGTCCAAGATTGAAAGGTTCAT...TGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACAGCACAGGCGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAATGCCAGGATCAGAGGTaGTTCCAGATGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: PLLLSVEVGLPQENEPKECQDQR*FQMPGP
Trigger: AGGACCAGGCATCTGGAACAACCTCTGATCCTGGCA...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTTCGTTGGAGTTCCACTaGGTCATGTCCTTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: YKDSFIGHTEFCLAGRSPSLEFH*VMSLAC
Trigger: ACAAGCCAAGGACATGACCAAGTGGAACTCCAACGA...AGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS GCA 90 bp CGTTGGAGTTCCACTTGGTCATGTCCTTGGCTTGTTTTTCCTCTGTaGAGTACAGGTTCTCATGTGCATCGAAGAACTCCTCTTCCGAGC +
Preference number: 5 (lower is better)
Translates to: RWSSTWSCPWLVFPL*STGSHVHRRTPLPS
Trigger: GCTCGGAAGAGGAGTTCTTCGATGCACATGAGAACCTGTACTGCACAGAGGAAAAACAAGCCAAGGACATGACCAAGTGGAACTCCAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TGTACACAGCTACACAGCAGAGTCAGTGTCTCCTGTACACCTGTTGGGCCCAGCTCCACAGGAGACAGGTaGAACACATTATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CTQLHSRVSVSCTPVGPSSTGDR*NTLLFS
Trigger: GGAAAACAATAATGTGTTCAACCTGTCTCCTGTGGA...GCTGGGCCCAACAGGTGTACAGGAGACACTGACTCTGCTGTGTAGCTGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTACTGACTGGAACAGCTaGGGGTCTTCTTCTGTCTTA +
Preference number: 5 (lower is better)
Translates to: YKDSFIGHTEFCLAGRSPTDWNS*GSSSVL
Trigger: TAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAGT...AGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp ACTTTGACCTTCCTTCCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGGAAAACTGGGCCATTTaGCGGGACAGCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TLTFLPLLLSVEVGLPQEENWAI*RDSMSC
Trigger: GCAGCTCATGCTGTCCCGCAAAATGGCCCAGTTTTC...CTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGGAAGGAAGGTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCGGTCATGTCCTTGGCTaGTTTTTCCTCTGTGCAGTA +
Preference number: 5 (lower is better)
Translates to: LYKDSFIGHTEFCLAGRSGHVLG*FFLCAV
Trigger: TACTGCACAGAGGAAAAACAAGCCAAGGACATGACC...GCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp CCTCTCTTACTTTCTGTAGAAGTGGGGCTTCCTCAAGAGAACGAGCCAAAGGAATCCGGACTCTCCATTTaGTCCATGAGGTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: PLLLSVEVGLPQENEPKESGLSI*SMRSLE
Trigger: CTCCAACGACCTCATGGACAAAATGGAGAGTCCGGA...TTCCTTTGGCTCGTTCTCTTGAGGAAGCCCCACTTCTACAGAAAGTAAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAAGAAGAGGTTGTACACTaGCTGACACGCTGGACGCAG +
Preference number: 5 (lower is better)
Translates to: ESELWLPGVDIKRTALRKEEVVH*LTRWTQ
Trigger: CTGCGTCCAGCGTGTCAGCAAGTGTACAACCTCTTC...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCCCTGAGGTTGAACACATTATaGTTTTCCCCAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TKTALLVTLSSAWQDAALRLNTL*FSPVSV
Trigger: GACAGACACTGGGGAAAACAATAATGTGTTCAACCT...CAGGGCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp GGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAATGAACCTTTCAATCTaGGACTGCATGCCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: GSTKTALLVTLSSAWQDAMNLSI*DCMPQY
Trigger: ATACTGGGGCATGCAGTCCAAGATTGAAAGGTTCAT...TGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp AGGCTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCTTTGGTTTTGTCTTCTaGTGCCAGAGACAGTATGGG +
Preference number: 5 (lower is better)
Translates to: RLYKDSFIGHTEFCLAGRFGFVF*CQRQYG
Trigger: CCCATACTGTCTCTGGCACAAGAAGACAAAACCAAA...GCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS-3UTR CAA 90 bp GCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTGGTTCCACAGGAGACAGGTaGAACACATTATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: AFLSCLREDFPHWTTLCGSTGDR*NTLLFS
Trigger: GGAAAACAATAATGTGTTCAACCTGTCTCCTGTGGA...ACCACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp ATGGCCTTTCTCTCCTGCTTGCGTGAAGATTTCCCACACTGGACTACTCTGTGTATGAACCTTTCAATCTaGGACTGCATGCCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: MAFLSCLREDFPHWTTLCMNLSI*DCMPQY
Trigger: ATACTGGGGCATGCAGTCCAAGATTGAAAGGTTCAT...ACACAGAGTAGTCCAGTGTGGGAAATCTTCACGCAAGCAGGAGAGAAAGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp TTCCATGGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAACGGGGGATGTCAATGTaGCTGCGGCTCAGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: FHGILVHKIITALYRTLERGMSM*LRLRCR
Trigger: TCGGCACCTGAGCCGCAGCAACATTGACATCCCCCG...TTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCCATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp CTCTACAAAGACAGCTTTATTGGTCACACTGAGTTCTGCCTGGCAGGACGCAGCTTTCCTTCTTTGGTTTaGTCTTCTTGTGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LYKDSFIGHTEFCLAGRSFPSLV*SSCARD
Trigger: GTCTCTGGCACAAGAAGACAAAACCAAAGAAGGAAA...GCTGCGTCCTGCCAGGCAGAACTCAGTGTGACCAATAAAGCTGTCTTTGTAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000159677.8
CDS TCA 90 bp TTTCATCTTGTGATTCCTCAGGCTCCGGACTCTCCATTTTGTCCATaGGGTCGTTGGAGTTCCACTTGGTCATGTCCTTGGCTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: FHLVIPQAPDSPFCP*GRWSSTWSCPWLVF
Trigger: AAAAACAAGCCAAGGACATGACCAAGTGGAACTCCAACGACCTCATGGACAAAATGGAGAGTCCGGAGCCTGAGGAATCACAAGATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp AGTGAGGTTGGACAGTTGAGAACTGGAGTCAACAAGAAGTGGACTGGACCCATTAGGTTGAACACATTATaGTTTTCCCCAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SEVGQLRTGVNKKWTGPIRLNTL*FSPVSV
Trigger: GACAGACACTGGGGAAAACAATAATGTGTTCAACCT...AATGGGTCCAGTCCACTTCTTGTTGACTCCAGTTCTCAACTGTCCAACCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GAGAGTGAGCTGTGGCTTCCTGGAGTCGACATTAAACGAACGGCATTAAGAAAATCCACAGGAGACAGGTaGAACACATTATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ESELWLPGVDIKRTALRKSTGDR*NTLLFS
Trigger: GGAAAACAATAATGTGTTCAACCTGTCTCCTGTGGA...TTTTCTTAATGCCGTTCGTTTAATGTCGACTCCAGGAAGCCACAGCTCACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAACTGACTGGAACAGCTaGGGGTCTTCTTCTGTCTTA +
Preference number: 5 (lower is better)
Translates to: GILVHKIITALYRTLETTTDWNS*GSSSVL
Trigger: TAAGACAGAAGAAGACCCCAAGCTGTTCCAGTCAGT...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS-3UTR CAA 90 bp GGAATCTTGGTCCATAAAATAATCACTGCTTTATACAGAACGCTGGAAACAACAAGGTTGAACACATTATaGTTTTCCCCAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: GILVHKIITALYRTLETTRLNTL*FSPVSV
Trigger: GACAGACACTGGGGAAAACAATAATGTGTTCAACCT...TGTTGTTTCCAGCGTTCTGTATAAAGCAGTGATTATTTTATGGACCAAGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS GCA 72 bp GGCCAGGTAGGCCGAAGCTGCCCTTGCGCAAAGCCATaGGCGTGGCCGTGTTCCGGGCTGGGCGAGCCCGGT +
Preference number: 6 (lower is better)
Translates to: GQVGRSCPCAKP*AWPCSGLGEPG
Trigger: ACCGGGCTCGCCCAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp GTTCAAGCCGGCCTGCCATGGCTCGGCCCCAGCAGCTaGCTGCCACGCTCATGCTGCGCTGGCCCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: VQAGLPWLGPSS*LPRSCCAGPAA
Trigger: AGCAGCGGGGCCAGCGCAGCATGAGCGTGGCAGCCAGCTGCTGGGGCCGAGCCATGGCAGGCCGGCTTGAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp TGGCTCGGCCCCAGCAGCTGGCTGCCACGCTCATGCTaGGCTGGCCCCGCTGCTCGCTGTCCATCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: WLGPSSWLPRSC*AGPAARCPSGS
Trigger: AGACCCAGATGGACAGCGAGCAGCGGGGCCAGCGCAGCATGAGCGTGGCAGCCAGCTGCTGGGGCCGAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp TGTCCAAGTCAGGGAGGCAGGGGGCCCGCTCCAGGTTaGGGCTCACCTGCCTTGCCCTGGCACGGGGACCCT +
Preference number: 6 (lower is better)
Translates to: CPSQGGRGPAPG*GSPALPWHGDP
Trigger: AGGGTCCCCGTGCCAGGGCAAGGCAGGTGAGCCCCAACCTGGAGCGGGCCCCCTGCCTCCCTGACTTGGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS CCA 72 bp CGCTGGTACCGAGGGATGCTGAAAGGCGGCAGGCTGTaGAAACGCCGCTCCAGCAGCGGCTCCAGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: RWYRGMLKGGRL*KRRSSSGSRRE
Trigger: CTCCCGCCTGGAGCCGCTGCTGGAGCGGCGTTTCCACAGCCTGCCGCCTTTCAGCATCCCTCGGTACCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 90 bp CGAGAGCGAAGGAAGTCACTCTGGCCAGGTAGGCCGAAGCTGCCCTaGCGCAAAGCCATGCGCGTGGCCGTGTTCCGGGCTGGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RERRKSLWPGRPKLP*RKAMRVAVFRAGRA
Trigger: GGCTCGCCCAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCCAGAGTGACTTCCTTCGCTCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp CAGGGCCCCGGCACCGTCCAGCATCGTGGAACTGCTTaGGCGGCGGGAGCTGGGCTCATTCCTCAGCACGCT +
Preference number: 6 (lower is better)
Translates to: QGPGTVQHRGTA*AAGAGLIPQHA
Trigger: AGCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAAGCAGTTCCACGATGCTGGACGGTGCCGGGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp GGGTCTGTGTCCGATCGTGCCGATGGCTGGGCCCACTaGGCTGGGCCGAGATGGTGCGGAGCAGGTGATTCC +
Preference number: 6 (lower is better)
Translates to: GSVSDRADGWAH*AGPRWCGAGDS
Trigger: GGAATCACCTGCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGACACAGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp TCGCTGTCCATCTGGGTCTGTGTCCGATCGTGCCGATaGCTGGGCCCACTGGGCTGGGCCGAGATGGTGCGG +
Preference number: 6 (lower is better)
Translates to: SLSIWVCVRSCR*LGPLGWAEMVR
Trigger: CCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGACACAGACCCAGATGGACAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp CACTGGCTCTGCGGAAGCCACGGCCAGCAGGGGCTGTaGCAGGTGACGAGGGGGCTGCATGCTCTTGGAAGA +
Preference number: 6 (lower is better)
Translates to: HWLCGSHGQQGL*QVTRGLHALGR
Trigger: TCTTCCAAGAGCATGCAGCCCCCTCGTCACCTGGCACAGCCCCTGCTGGCCGTGGCTTCCGCAGAGCCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp GGAAGTCACTCTGGCCAGGTAGGCCGAAGCTGCCCTTaGGCAAAGCCATGCGCGTGGCCGTGTTCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: GSHSGQVGRSCP*AKPCAWPCSGL
Trigger: CAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCCAGAGTGACTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CGTCCAGCATCGTGGAACTGCTTGAGCGGCGGGAGCTaGGCTCATTCCTCAGCACGCTGGCGTGGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: RPASWNCLSGGS*AHSSARWRGGW
Trigger: CCAGCCTCCACGCCAGCGTGCTGAGGAATGAGCCCAGCTCCCGCCGCTCAAGCAGTTCCACGATGCTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CAAACTTGCCCAGGGCCCCGGCACCGTCCAGCATCGTaGAACTGCTTGAGCGGCGGGAGCTGGGCTCATTCC +
Preference number: 6 (lower is better)
Translates to: QTCPGPRHRPAS*NCLSGGSWAHS
Trigger: GGAATGAGCCCAGCTCCCGCCGCTCAAGCAGTTCCACGATGCTGGACGGTGCCGGGGCCCTGGGCAAGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CTTGCGCAAAGCCATGCGCGTGGCCGTGTTCCGGGCTaGGCGAGCCCGGTGATTGTACTTGAGCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: LAQSHARGRVPG*ASPVIVLELGQ
Trigger: CTGGCCCAGCTCAAGTACAATCACCGGGCTCGCCCAGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp TGTCCATCTGGGTCTGTGTCCGATCGTGCCGATGGCTaGGCCCACTGGGCTGGGCCGAGATGGTGCGGAGCA +
Preference number: 6 (lower is better)
Translates to: CPSGSVSDRADG*AHWAGPRWCGA
Trigger: TGCTCCGCACCATCTCGGCCCAGCCCAGTGGGCCCAGCCATCGGCACGATCGGACACAGACCCAGATGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp GGGTGCCCGGGGACAGCAGGTCAGCGTCCTGCATGCTaGCCACACTGCCTCGGCGGCTACTGCTTTGACTCT +
Preference number: 6 (lower is better)
Translates to: GCPGTAGQRPAC*PHCLGGYCFDS
Trigger: AGAGTCAAAGCAGTAGCCGCCGAGGCAGTGTGGTCAGCATGCAGGACGCTGACCTGCTGTCCCCGGGCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CTGTGTTGTGGGTCTGAAGCACATCCGCCAGCAGTGTaGAGCAGCCGTCCCCCAGCGGGTAGCGCTGGTACC +
Preference number: 6 (lower is better)
Translates to: LCCGSEAHPPAV*SSRPPAGSAGT
Trigger: GGTACCAGCGCTACCCGCTGGGGGACGGCTGCTCCACACTGCTGGCGGATGTGCTTCAGACCCACAACACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 72 bp AGGAAGTCACTCTGGCCAGGTAGGCCGAAGCTGCCCTaGCGCAAAGCCATGCGCGTGGCCGTGTTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: RKSLWPGRPKLP*RKAMRVAVFRA
Trigger: AGCCCGGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCCAGAGTGACTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 72 bp GCGAGCAAGGATAGGCGCCTGATGCTGGGGGTGTGGTaGAGCGACGAGGGACCCTTCTGGGCGATGCTGGAC +
Preference number: 6 (lower is better)
Translates to: ASKDRRLMLGVW*SDEGPFWAMLD
Trigger: GTCCAGCATCGCCCAGAAGGGTCCCTCGTCGCTCAACCACACCCCCAGCATCAGGCGCCTATCCTTGCTCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161938.8
CDS TCA 72 bp GTGGGTCCTCTTGCGCTGCCACCTTTCCCTGGGCTGTaGAGGCGTGAACACGGACACCTCCTTGCCGTCCAG +
Preference number: 6 (lower is better)
Translates to: VGPLALPPFPGL*RREHGHLLAVQ
Trigger: CTGGACGGCAAGGAGGTGTCCGTGTTCACGCCTTCACAGCCCAGGGAAAGGTGGCAGCGCAAGAGGACCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp CCTCAGTGCCGTTGCTTCGGGGGATGTCAATGTTGCTaGGGCTCAGGTGCCGACTGCTCTCCAGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PQCRCFGGCQCC*GSGADCSPGWS
Trigger: GCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCCGCAGCAACATTGACATCCCCCGAAGCAACGGCACTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp GCCACGTTCCGCAGCTTCACGTGGGTCCTCTTGCGCTaGCACCTTTCCCTGGGCTGTGAAGGCGTGAACACG +
Preference number: 6 (lower is better)
Translates to: ATFRSFTWVLLR*HLSLGCEGVNT
Trigger: CGTGTTCACGCCTTCACAGCCCAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGAAGCTGCGGAACGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp AGCGAAGGAAGTCACTCTGGCCAGGTAGGCCGAAGCTaGCCTTGCGCAAAGCCATGCGCGTGGCCGTGTTCC +
Preference number: 6 (lower is better)
Translates to: SEGSHSGQVGRS*PCAKPCAWPCS
Trigger: GGAACACGGCCACGCGCATGGCTTTGCGCAAGGGCAGCTTCGGCCTACCTGGCCAGAGTGACTTCCTTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 90 bp ATCCGGTGGTTGGCTGCCACGTTCCGCAGCTTCACGTGGGTCCTCTaGCGCTGCCACCTTTCCCTGGGCTGTGAAGGCGTGAACACGGAC +
Preference number: 6 (lower is better)
Translates to: IRWLAATFRSFTWVL*RCHLSLGCEGVNTD
Trigger: GTCCGTGTTCACGCCTTCACAGCCCAGGGAAAGGTGGCAGCGCAAGAGGACCCACGTGAAGCTGCGGAACGTGGCAGCCAACCACCGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 90 bp CGGCCCGTCACAACCTGCGGGCCATCCTCATTGGCAACTGCGTCATaGATCCGGTGGTTGGCTGCCACGTTCCGCAGCTTCACGTGGGTC +
Preference number: 6 (lower is better)
Translates to: RPVTTCGPSSLATAS*IRWLAATFRSFTWV
Trigger: GACCCACGTGAAGCTGCGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCCGCAGGTTGTGACGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp GTCGGAGTCCCTGGCGATACTCTGCATCCTCCACTCTaGGATGCTATGTCGGGAGGGGCTGGCTCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: VGVPGDTLHPPL*DAMSGGAGSPL
Trigger: AAGCGGGGAGCCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACTCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp AGTCCCTGGCGATACTCTGCATCCTCCACTCTGAGATaGTATGTCGGGAGGGGCTGGCTCCCCGCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: SPWRYSASSTLR*YVGRGWLPAWR
Trigger: CCTCCAAGCGGGGAGCCAGCCCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp AGTCCTCAGTGCCGTTGCTTCGGGGGATGTCAATGTTaGTGCGGCTCAGGTGCCGACTGCTCTCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SPQCRCFGGCQC*CGSGADCSPGW
Trigger: CCAGCCTGGAGAGCAGTCGGCACCTGAGCCGCAGCAACATTGACATCCCCCGAAGCAACGGCACTGAGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp TGCGGGGCAGCTGCCTTCTGGAGTCCTCAGTGCCGTTaGTTCGGGGGATGTCAATGTTGCTGCGGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: CGAAAFWSPQCR*FGGCQCCCGSG
Trigger: ACCTGAGCCGCAGCAACATTGACATCCCCCGAAGCAACGGCACTGAGGACTCCAGAAGGCAGCTGCCCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp GCCCGTCACAACCTGCGGGCCATCCTCATTGGCAACTaGGTCATTGATCCGGTGGTTGGCTGCCACGTTCCG +
Preference number: 6 (lower is better)
Translates to: ARHNLRAILIGN*VIDPVVGCHVP
Trigger: CGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCCGCAGGTTGTGACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CTGAGATGCTATGTCGGGAGGGGCTGGCTCCCCGCTTaGAGGACCTTGAGGACTTGGAGGAGGTGGACCACT +
Preference number: 6 (lower is better)
Translates to: LRCYVGRGWLPA*RTLRTWRRWTT
Trigger: AGTGGTCCACCTCCTCCAAGTCCTCAAGGTCCTCCAAGCGGGGAGCCAGCCCCTCCCGACATAGCATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp TGCCTCCATGCAGCACCAGCAGCAGCACGTGAATCTTaGAGGGTGGCGCGGCTAGTGGCTGGCTCACCTCAT +
Preference number: 6 (lower is better)
Translates to: CLHAAPAAARES*RVARLVAGSPH
Trigger: ATGAGGTGAGCCAGCCACTAGCCGCGCCACCCTCCAAGATTCACGTGCTGCTGCTGGTGCTGCATGGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp GATGGGGTAGACGCCCACCCCCAGGCGGTGTGTTTCTaGAATGGTGTAGGAGACGCGCCCACTGCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: DGVDAHPQAVCF*NGVGDAPTAVG
Trigger: ACCAACAGCAGTGGGCGCGTCTCCTACACCATTCCAGAAACACACCGCCTGGGGGTGGGCGTCTACCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 72 bp GAGTCCTCAGTGCCGTTGCTTCGGGGGATGTCAATGTaGCTGCGGCTCAGGTGCCGACTGCTCTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ESSVPLLRGMSM*LRLRCRLLSRL
Trigger: CAGCCTGGAGAGCAGTCGGCACCTGAGCCGCAGCAACATTGACATCCCCCGAAGCAACGGCACTGAGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 72 bp TTGCGGGGCAGCTGCCTTCTGGAGTCCTCAGTGCCGTaGCTTCGGGGGATGTCAATGTTGCTGCGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LRGSCLLESSVP*LRGMSMLLRLR
Trigger: CCTGAGCCGCAGCAACATTGACATCCCCCGAAGCAACGGCACTGAGGACTCCAGAAGGCAGCTGCCCCGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp GGGGCTGCATGCTCTTGGAAGACTGTGTTGTGGGTCTaGAGCACATCCGCCAGCAGTGTGGAGCAGCCGTCC +
Preference number: 6 (lower is better)
Translates to: GAACSWKTVLWV*STSASSVEQPS
Trigger: GGACGGCTGCTCCACACTGCTGGCGGATGTGCTTCAGACCCACAACACAGTCTTCCAAGAGCATGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp TCTTGCGCTGCCACCTTTCCCTGGGCTGTGAAGGCGTaGACACGGACACCTCCTTGCCGTCCAGCTCTAGGA +
Preference number: 6 (lower is better)
Translates to: SCAATFPWAVKA*TRTPPCRPALG
Trigger: TCCTAGAGCTGGACGGCAAGGAGGTGTCCGTGTTCACGCCTTCACAGCCCAGGGAAAGGTGGCAGCGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp GCTTCTGTCCCCACCACTTGGCAGCAATCTGGGCGATaGTGGACGCTGTGTAGCTCTCGGCCATGCCTGACA +
Preference number: 6 (lower is better)
Translates to: ASVPTTWQQSGR*WTLCSSRPCLT
Trigger: TGTCAGGCATGGCCGAGAGCTACACAGCGTCCAGCATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS GCA 72 bp GACTGCGACATCCTTCGTGGAGCCGTAGGCCGCATGTaGGCGCAGGTGAAGCTCAGAGATGAGCAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: DCDILRGAVGRM*AQVKLRDEQLQ
Trigger: CTGAAGCTGCTCATCTCTGAGCTTCACCTGCGCGCACATGCGGCCTACGGCTCCACGAAGGATGTCGCAGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp AGGCCTGGTGCTGCTGGATGGTGTCCAGCTCATAGGTaGACGAGTCACTCCTTTTGCGGGGCAGCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: RPGAAGWCPAHR*TSHSFCGAAAF
Trigger: GAAGGCAGCTGCCCCGCAAAAGGAGTGACTCGTCCACCTATGAGCTGGACACCATCCAGCAGCACCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp TCTGTCCCCACCACTTGGCAGCAATCTGGGCGATGCTaGACGCTGTGTAGCTCTCGGCCATGCCTGACACCT +
Preference number: 6 (lower is better)
Translates to: SVPTTWQQSGRC*TLCSSRPCLTP
Trigger: AGGTGTCAGGCATGGCCGAGAGCTACACAGCGTCCAGCATCGCCCAGATTGCTGCCAAGTGGTGGGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000162812.8
CDS CCA 72 bp GGGCCATCCTCATTGGCAACTGCGTCATTGATCCGGTaGTTGGCTGCCACGTTCCGCAGCTTCACGTGGGTC +
Preference number: 6 (lower is better)
Translates to: GPSSLATASLIR*LAATFRSFTWV
Trigger: GACCCACGTGAAGCTGCGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 72 bp ATGAACCGGCCCGTCACAACCTGCGGGCCATCCTCATaGGCAACTGCGTCATTGATCCGGTGGTTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: MNRPVTTCGPSS*ATASLIRWLAA
Trigger: GGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCCGCAGGTTGTGACGGGCCGGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp CAACCTGCGGGCCATCCTCATTGGCAACTGCGTCATTaGTCCGGTGGTTGGCTGCCACGTTCCGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: QPAGHPHWQLRH*SGGWLPRSAAS
Trigger: TGAAGCTGCGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCCGCAGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp TCTTCCGAGCCTTCGTCGGAGTCCCTGGCGATACTCTaGATCCTCCACTCTGAGATGCTATGTCGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: SSEPSSESLAIL*ILHSEMLCREG
Trigger: CCCCTCCCGACATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAGGCTCGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp TCCTTGCCGTCCAGCTCTAGGATGCTCGAGCTGTCGTaGCGCATGACCTGTCTCAGCAGAAAGGAGACCACG +
Preference number: 6 (lower is better)
Translates to: SLPSSSRMLELS*RMTCLSRKETT
Trigger: CGTGGTCTCCTTTCTGCTGAGACAGGTCATGCGGCACGACAGCTCGAGCATCCTAGAGCTGGACGGCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 72 bp CCATCCTCATTGGCAACTGCGTCATTGATCCGGTGGTaGGCTGCCACGTTCCGCAGCTTCACGTGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: PSSLATASLIRW*AATFRSFTWVL
Trigger: GAGGACCCACGTGAAGCTGCGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CAA 72 bp ACAACCTGCGGGCCATCCTCATTGGCAACTGCGTCATaGATCCGGTGGTTGGCTGCCACGTTCCGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: TTCGPSSLATAS*IRWLAATFRSF
Trigger: GAAGCTGCGGAACGTGGCAGCCAACCACCGGATCAATGACGCAGTTGCCAATGAGGATGGCCCGCAGGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp GGGGCTGCATGCTCTTGGAAGACTGTGTTGTGGGTCTaGAGCACATCCGACTCAGAACAGCCCAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GAACSWKTVLWV*STSDSEQPRLW
Trigger: CCAGAGCCTGGGCTGTTCTGAGTCGGATGTGCTTCAGACCCACAACACAGTCTTCCAAGAGCATGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161273.8
CDS CCA 72 bp ACTCCTCCACCACCCGCAAGGCTGCTTTGGGCAAGATaGAGCGAAACCAGCCAGGAATGTGCATGCCCACAT +
Preference number: 6 (lower is better)
Translates to: TPPPPARLLWAR*SETSQECACPH
Trigger: ATGTGGGCATGCACATTCCTGGCTGGTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTGGAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CATTCCAGGACTCCTCCACCACCCGCAAGGCTGCTTTaGGCAAGATGGAGCGAAACCAGCCAGGAATGTGCA +
Preference number: 6 (lower is better)
Translates to: HSRTPPPPARLL*ARWSETSQECA
Trigger: TGCACATTCCTGGCTGGTTTCGCTCCATCTTGCCCAAAGCAGCCTTGCGGGTGGTGGAGGAGTCCTGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp ACGCGCCCACTGCTGTTGGTCACTAGAGTGTCTAGGTaGAGCCACTCACCTGAAGGTGGTTGCGTCATGATG +
Preference number: 6 (lower is better)
Translates to: TRPLLLVTRVSR*SHSPEGGCVMM
Trigger: CATCATGACGCAACCACCTTCAGGTGAGTGGCTGCACCTAGACACTCTAGTGACCAACAGCAGTGGGCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp GATGTGCATGGGAGAGAGGCTGATGGAGTTATAGACTaGGACATCCTTCGTGGAGCCGTAGGCCGCATGTGC +
Preference number: 6 (lower is better)
Translates to: DVHGREADGVID*DILRGAVGRMC
Trigger: GCACATGCGGCCTACGGCTCCACGAAGGATGTCGCAGTCTATAACTCCATCAGCCTCTCTCCCATGCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CGGTTCTCCAGGATCTCTACCCCGCTGCCTTGCCCGTaGGTCTCATTCCGGCTCTTCTTCTGTATCATGTAC +
Preference number: 6 (lower is better)
Translates to: RFSRISTPLPCP*VSFRLFFCIMY
Trigger: GTACATGATACAGAAGAAGAGCCGGAATGAGACCCACGGGCAAGGCAGCGGGGTAGAGATCCTGGAGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp ATCGGAACTCCACCTTGCAGAGCTTGTAGGCGCACATaGTGGGGAGGAGCCGCTTCTTGTACTCCTGAATCC +
Preference number: 6 (lower is better)
Translates to: IGTPPCRACRRT*WGGAASCTPES
Trigger: GGATTCAGGAGTACAAGAAGCGGCTCCTCCCCATCATGTGCGCCTACAAGCTCTGCAAGGTGGAGTTCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp GGCGGCCCACAATGTAGATGTGCATGGGAGAGAGGCTaGTGGAGTTATAGACTGCGACATCCTTCGTGGAGC +
Preference number: 6 (lower is better)
Translates to: GGPQCRCAWERG*WSYRLRHPSWS
Trigger: GCTCCACGAAGGATGTCGCAGTCTATAACTCCATCAGCCTCTCTCCCATGCACATCTACATTGTGGGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp TTGTTCCAGATGCCTGGTCCTTGGTGGCACTGTCCTTaGTTAGTTCTGAGGGGCCTTCCTCCGAAAACTGGG +
Preference number: 6 (lower is better)
Translates to: LFQMPGPWWHCP*LVLRGLPPKTG
Trigger: CCCAGTTTTCGGAGGAAGGCCCCTCAGAACTAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp GGTGTGTTTCTGGAATGGTGTAGGAGACGCGCCCACTaGTGTTGGTCACTAGAGTGTCTAGGTGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: GVFLEWCRRRAH*CWSLECLGAAT
Trigger: AGTGGCTGCACCTAGACACTCTAGTGACCAACAGCAGTGGGCGCGTCTCCTACACCATTCCAGAAACACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000086123.11
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CAGGATCAGAGGTTGTTCCAGATGCCTGGTCCTTGGTaGCACTGTCCTTGCTTAGTTCTGAGGGGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: QDQRLFQMPGPW*HCPCLVLRGLP
Trigger: AGGAAGGCCCCTCAGAACTAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGGAACAACCTCTGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp TGCCAGGATCAGAGGTTGTTCCAGATGCCTGGTCCTTaGTGGCACTGTCCTTGCTTAGTTCTGAGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: CQDQRLFQMPGP*WHCPCLVLRGL
Trigger: AAGGCCCCTCAGAACTAAGCAAGGACAGTGCCACCAAGGACCAGGCATCTGGAACAACCTCTGATCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp CGAAGAACTCCTCTTCCGAGCCTTCGTCGGAGTCCCTaGCGATACTCTGCATCCTCCACTCTGAGATGCTAT +
Preference number: 6 (lower is better)
Translates to: RRTPLPSLRRSP*RYSASSTLRCY
Trigger: ATAGCATCTCAGAGTGGAGGATGCAGAGTATCGCCAGGGACTCCGACGAAGGCTCGGAAGAGGAGTTCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp GTGATTCCTCAGGCTCCGGACTCTCCATTTTGTCCATaGGGTCGTTGGAGTTCCACTTGGTCATGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: VIPQAPDSPFCP*GRWSSTWSCPW
Trigger: CCAAGGACATGACCAAGTGGAACTCCAACGACCTCATGGACAAAATGGAGAGTCCGGAGCCTGAGGAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp TCCGGCTCTTCTTCTGTATCATGTACAGCTGGGCAATaGGGTATTCATCCACGGTCATTGGCAGGGGAATCC +
Preference number: 6 (lower is better)
Translates to: SGSSSVSCTAGQ*GIHPRSLAGES
Trigger: GGATTCCCCTGCCAATGACCGTGGATGAATACCGCATTGCCCAGCTGTACATGATACAGAAGAAGAGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161644.3
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp GGCTTGTTTTTCCTCTGTGCAGTACAGGTTCTCATGTaGATCGAAGAACTCCTCTTCCGAGCCTTCGTCGGA +
Preference number: 6 (lower is better)
Translates to: GLFFLCAVQVLM*IEELLFRAFVG
Trigger: TCCGACGAAGGCTCGGAAGAGGAGTTCTTCGATGCACATGAGAACCTGTACTGCACAGAGGAAAAACAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS CCA 72 bp GTCTCATTCCGGCTCTTCTTCTGTATCATGTACAGCTaGGCAATGCGGTATTCATCCACGGTCATTGGCAGG +
Preference number: 6 (lower is better)
Translates to: VSFRLFFCIMYS*AMRYSSTVIGR
Trigger: CCTGCCAATGACCGTGGATGAATACCGCATTGCCCAGCTGTACATGATACAGAAGAAGAGCCGGAATGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161644.3
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS TCA 72 bp GAACTCAGAGCCACTCTGCTGGTAGATTTCATCTTGTaGTTCCTCAGGCTCCGGACTCTCCATTTTGTCCAT +
Preference number: 6 (lower is better)
Translates to: ELRATLLVDFIL*FLRLRTLHFVH
Trigger: ATGGACAAAATGGAGAGTCCGGAGCCTGAGGAATCACAAGATGAAATCTACCAGCAGAGTGGCTCTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8
CDS GCA 72 bp TCCACTTGGTCATGTCCTTGGCTTGTTTTTCCTCTGTaGAGTACAGGTTCTCATGTGCATCGAAGAACTCCT +
Preference number: 6 (lower is better)
Translates to: STWSCPWLVFPL*STGSHVHRRTP
Trigger: AGGAGTTCTTCGATGCACATGAGAACCTGTACTGCACAGAGGAAAAACAAGCCAAGGACATGACCAAGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000086123.11
ENSMUST00000159677.8
ENSMUST00000161273.8
ENSMUST00000161938.8
ENSMUST00000162812.8