Pregenerated sensors for PITPNC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040430Ensembl transcript IDs: ENSMUST00000040380.13, ENSMUST00000103064.10, ENSMUST00000134763.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGGCCATGGGAGAGGGCGTGAACCCCAGAGATGTTGCAGAATGTaGAGACTGAAGAGAGGGTGCAGGCAGGGTCCACCGGCTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LGHGRGREPQRCCRM*RLKRGCRQGPPAGR Trigger: CCTCCCAGCCGGTGGACCCTGCCTGCACCCTCTCTTCAGTCTCCACATTCTGCAACATCTCTGGGGTTCACGCCCTCTCCCATGGCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR GCA 90 bp | GGCCAGCATCTGGGCCATGGGAGAGGGCGTGAACCCCAGAGATGTTaGAGAATGTGGAGACTGAAGAGAGGGTGCAGGCAGGGTCCACCG | + |
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Preference number: 1 (lower is better) Translates to: GQHLGHGRGREPQRC*RMWRLKRGCRQGPP Trigger: CGGTGGACCCTGCCTGCACCCTCTCTTCAGTCTCCACATTCTGCAACATCTCTGGGGTTCACGCCCTCTCCCATGGCCCAGATGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR CCA 90 bp | GAGGTTGACCCTGAACTTCTGATCCTCCTGCCTGGTTACCATGGCTaGGATGGAACCCCGGGTTCCACAGTAGCTGTAGCAGCTCTACCC | + |
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Preference number: 1 (lower is better) Translates to: EVDPELLILLPGYHG*DGTPGSTVAVAALP Trigger: GGGTAGAGCTGCTACAGCTACTGTGGAACCCGGGGTTCCATCCCAGCCATGGTAACCAGGCAGGAGGATCAGAAGTTCAGGGTCAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR GCA 90 bp | CACACCTCTGTACAAATAGGAGCCTGCGATTCCACTCCTCCCGCCTaGCTGTATTTACTGGATTCCAGGGACACAGGCAATAGCTGGATT | + |
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Preference number: 1 (lower is better) Translates to: HTSVQIGACDSTPPA*LYLLDSRDTGNSWI Trigger: AATCCAGCTATTGCCTGTGTCCCTGGAATCCAGTAAATACAGGCAGGCGGGAGGAGTGGAATCGCAGGCTCCTATTTGTACAGAGGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR TCA 90 bp | ATCGACGACAGAACAGCCATAAAAGGACACAGAGGGCTGTGTGTGTaGGGGTCACTTTCGCTTGCGTTGCTTGCAACACTGTGCATTCGA | + |
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Preference number: 1 (lower is better) Translates to: IDDRTAIKGHRGLCV*GSLSLALLATLCIR Trigger: TCGAATGCACAGTGTTGCAAGCAACGCAAGCGAAAGTGACCCTCACACACACAGCCCTCTGTGTCCTTTTATGGCTGTTCTGTCGTCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR GCA 90 bp | CTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTaGAGATACAGTTTGAACTCGAAAAGCAAGAAGGTGGGGAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: LFSGTLGNRTGDLKF*RYSLNSKSKKVGRL Trigger: AAGCCTCCCCACCTTCTTGCTTTTCGAGTTCAAACTGTATCTGCAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR CCA 90 bp | TGCTTCCTAAAGCCTGGTGATGGGCAAACCATTTCCAGGAATATCTaGGTGTTCCTAAGAGTAAACCAGGAGGCGTGGCTTCTCTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: CFLKPGDGQTISRNI*VFLRVNQEAWLLFC Trigger: ACAGAAGAGAAGCCACGCCTCCTGGTTTACTCTTAGGAACACCCAGATATTCCTGGAAATGGTTTGCCCATCACCAGGCTTTAGGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR TCA 90 bp | AGAATCGTTATGGATGAAGCTCACAAGTCAAACTTTGCAGGTCCCTaGAGAGAAGATGTCTGTCTCACCTGGGGCTCTCTGTTTCCGGAA | + |
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Preference number: 1 (lower is better) Translates to: RIVMDEAHKSNFAGP*REDVCLTWGSLFPE Trigger: TTCCGGAAACAGAGAGCCCCAGGTGAGACAGACATCTTCTCTTCAGGGACCTGCAAAGTTTGACTTGTGAGCTTCATCCATAACGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR TCA 90 bp | AGTCCCGGGCTGACTACAAAGGAGAGAGAACTCACAGGAAGGGAATaGGAACGTAGCCTTTTGAAAGTGAACCAGATTGTTGACCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: SPGLTTKERELTGRE*ERSLLKVNQIVDLD Trigger: GTCAAGGTCAACAATCTGGTTCACTTTCAAAAGGCTACGTTCTCATTCCCTTCCTGTGAGTTCTCTCTCCTTTGTAGTCAGCCCGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR TCA 90 bp | CATTATCATAGGTTAGCGCTGCAGTTGGTGTCAAAAGTCCCGGGCTaGCTACAAAGGAGAGAGAACTCACAGGAAGGGAATGAGAACGTA | + |
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Preference number: 1 (lower is better) Translates to: HYHRLALQLVSKVPG*LQRRENSQEGNENV Trigger: TACGTTCTCATTCCCTTCCTGTGAGTTCTCTCTCCTTTGTAGTCAGCCCGGGACTTTTGACACCAACTGCAGCGCTAACCTATGATAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR TCA 90 bp | CTGTGGATCTTGAGCAGTAAGATATCATACTCAGACAGACCGCTTTaGAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LWILSSKISYSDRPL*RWNTEEPKVSCVCP Trigger: TGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCGGTCTGTCTGAGTATGATATCTTACTGCTCAAGATCCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR GCA 90 bp | GGCCCCCGATATTTAGATTATAAGGAAGGCCTAAGAGAATGGTGGTaGTTCCTAAAGCCTGGTGATGGGCAAACCATTTCCAGGAATATC | + |
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Preference number: 1 (lower is better) Translates to: GPRYLDYKEGLREWW*FLKPGDGQTISRNI Trigger: GATATTCCTGGAAATGGTTTGCCCATCACCAGGCTTTAGGAAGCACCACCATTCTCTTAGGCCTTCCTTATAATCTAAATATCGGGGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR TCA 90 bp | TTCCACATTGTATTAGTTGTGGTCATAAGTCATCCAGGCAAGATTTaGGAAGCCACCAGGGCACAAAAAGGGGAAGCGAAGAGACGCAAA | + |
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Preference number: 1 (lower is better) Translates to: FHIVLVVVISHPGKI*EATRAQKGEAKRRK Trigger: TTTGCGTCTCTTCGCTTCCCCTTTTTGTGCCCTGGTGGCTTCTCAAATCTTGCCTGGATGACTTATGACCACAACTAATACAATGTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR GCA 90 bp | AAAGGGTTTGAGAAAAGATTACGGTTTTCCCACAAGCAAGATTCATaGTTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGTC | + |
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Preference number: 1 (lower is better) Translates to: KGFEKRLRFSHKQDS*FHTMQRRVPYYGTV Trigger: GACAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTTTTCTCAAACCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR CCA 90 bp | GCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATaGTACTGTCACCTTAAGGAAAAGATGCGCTGTTATGGTAATCTA | + |
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Preference number: 1 (lower is better) Translates to: ARFMLPYHAKKGTLL*YCHLKEKMRCYGNL Trigger: TAGATTACCATAACAGCGCATCTTTTCCTTAAGGTGACAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR TCA 90 bp | AAGTGGGAGACTGTCAATGAATTCTACTTAGCTTGTCGAAATTTCTaGGAATCGTTATGGATGAAGCTCACAAGTCAAACTTTGCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: KWETVNEFYLACRNF*ESLWMKLTSQTLQV Trigger: GACCTGCAAAGTTTGACTTGTGAGCTTCATCCATAACGATTCTCAGAAATTTCGACAAGCTAAGTAGAATTCATTGACAGTCTCCCACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR GCA 90 bp | CATCCTCACAAGAATTACTCATGTTCTATATACATATTCCTCAAATaGTTGGATCCCGCAATAGCAGATTCACATAAGGACAAAGCGAAA | + |
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Preference number: 1 (lower is better) Translates to: HPHKNYSCSIYIFLK*LDPAIADSHKDKAK Trigger: TTTCGCTTTGTCCTTATGTGAATCTGCTATTGCGGGATCCAAGCATTTGAGGAATATGTATATAGAACATGAGTAATTCTTGTGAGGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | AACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCAAAGCAGCTCTACCCACTaGGCGGTGTCCTCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: NLYYTKTEEPTPARISLQSSSTH*AVSSAP Trigger: AGGGGCTGAGGACACCGCTCAGTGGGTAGAGCTGCT...TTGCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | AACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCAAGGGACAGCTAGGACATaGGCTCTGGAGCTCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: NLYYTKTEEPTPARISLQGTART*ALELPS Trigger: GCTGGGGAGCTCCAGAGCCCATGTCCTAGCTGTCCC...TTGCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | GGCGTGGTGTTACTGGAAAAACTAGGTGCCAGATGGGCTAGCCACCTGCGCAAACCATGGGAGAGGGCGTaGACCCCAGAGATGTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GVVLLEKLGARWASHLRKPWERA*TPEMLQ Trigger: CTGCAACATCTCTGGGGTTCACGCCCTCTCCCATGG...TTTGCGCAGGTGGCTAGCCCATCTGGCACCTAGTTTTTCCAGTAACACCACGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | GCATTTCCTTTCCTGAGGTTGAAGGTCACGAGTCAGGAAGGGACAGCTAGGACAAGCAGCTCTACCCACTaGGCGGTGTCCTCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: AFPFLRLKVTSQEGTARTSSSTH*AVSSAP Trigger: AGGGGCTGAGGACACCGCTCAGTGGGTAGAGCTGCT...TGTCCTAGCTGTCCCTTCCTGACTCGTGACCTTCAACCTCAGGAAAGGAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | TCAACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCGCCAGACATTCTCACTaGGTACAGCTGCATGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: STCTTRKPRSPPQPASACARHSH*VQLHGG Trigger: TCCCCCATGCAGCTGTACTCAGTGAGAATGTCTGGC...GCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | AAACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCACCATGGGAGAGGGCGTaGACCCCAGAGATGTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KHHKTLTQESAEREMLLPPWERA*TPEMLQ Trigger: CTGCAACATCTCTGGGGTTCACGCCCTCTCCCATGG...TGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTGTCAACCCTGGTTACCATGGCTaGGATGGAACCCCGGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: EGGIQKNPRCPVSAHGVNPGYHG*DGTPGS Trigger: GGAACCCGGGGTTCCATCCCAGCCATGGTAACCAGG...GTTGACACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTTTTGAAAGCCAGACATTCTCACTGAGTACAGCTGCATGGGGGAGGGAAGCAGGGTCCACCGGCTaGGAGGTGTCAGGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FAFESQTFSLSTAAWGREAGSTG*EVSGKE Trigger: CTCCTTCCCTGACACCTCCCAGCCGGTGGACCCTGC...TTCCCTCCCCCATGCAGCTGTACTCAGTGAGAATGTCTGGCTTTCAAAAGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | ACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATGCTGAGTACAGCTGCATaGGGGAGGGAACCACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TPQNLDPGKRRERDAAAMLSTAA*GREPLR Trigger: CCTCAGTGGTTCCCTCCCCCATGCAGCTGTACTCAG...CATGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | TCAACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCCTGCATTGCTCTATCTaGTTCCCTTCCTTGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: STCTTRKPRSPPQPASACLHCSI*FPSLWV Trigger: AACCCACAAGGAAGGGAAGCAGATAGAGCAATGCAG...GCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGACATGGACTGTGAGGTTCTCCATGAAGTCACACCCTCTTACATCGTGAAGGCGCAGAGAGAGAGATaGTGCTGCCATGCCACACCA | + |
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Preference number: 2 (lower is better) Translates to: RDMDCEVLHEVTPSYIVKAQRER*CCHATP Trigger: TGGTGTGGCATGGCAGCAGCATCTCTCTCTCTGCGC...CTTCACGATGTAAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | GCATTTCCTTTCCTGAGGTTGAAGGTCACGAGTCAGGAAGGGACAGCTAGGACAAGTCCCAGGGCCTCCTaGATGTTAGGCAAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: AFPFLRLKVTSQEGTARTSPRAS*MLGKNS Trigger: AGAGTTCTTGCCTAACATTCAGGAGGCCCTGGGACT...TGTCCTAGCTGTCCCTTCCTGACTCGTGACCTTCAACCTCAGGAAAGGAAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | GCATTTCCTTTCCTGAGGTTGAAGGTCACGAGTCAGGAAGGGACAGCTAGGACATCCGGGGCCGGTCTTTaGGAATGGACAGAAATTCTG | + |
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Preference number: 2 (lower is better) Translates to: AFPFLRLKVTSQEGTARTSGAGL*EWTEIL Trigger: CAGAATTTCTGTCCATTCCCAAAGACCGGCCCCGGA...TGTCCTAGCTGTCCCTTCCTGACTCGTGACCTTCAACCTCAGGAAAGGAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | AGGGACATGGACTGTGAGGTTCTCCATGAAGTCACACCCTCTTACATCGTGAAGTTGACCCTGAACTTCTaGTCCTCCTGCCTGGTTACC | + |
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Preference number: 2 (lower is better) Translates to: RDMDCEVLHEVTPSYIVKLTLNF*SSCLVT Trigger: GGTAACCAGGCAGGAGGATCAGAAGTTCAGGGTCAA...CTTCACGATGTAAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | ACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATGGAACCCCAGAGATGTTaGAGAATGTGGAGACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TPQNLDPGKRRERDAAAMEPQRC*RMWRLK Trigger: CTTCAGTCTCCACATTCTGCAACATCTCTGGGGTTC...CATGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | AGATGTCTGTCTCACCTGGGGCTCTCTGTTTCCGGAATATTCCACATTGTATTACCTGGTTACCATGGCTaGGATGGAACCCCGGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RCLSHLGLSVSGIFHIVLPGYHG*DGTPGS Trigger: GGAACCCGGGGTTCCATCCCAGCCATGGTAACCAGG...TAATACAATGTGGAATATTCCGGAAACAGAGAGCCCCAGGTGAGACAGACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | AAGATTACGGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGCAGGGTCCACCGGCTaGGAGGTGTCAGGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: KITVFPQARFMLPYHAKKAGSTG*EVSGKE Trigger: CTCCTTCCCTGACACCTCCCAGCCGGTGGACCCTGC...CTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTGCCGGTCTTTGGGAATaGACAGAAATTCTGGCGCAT | + |
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Preference number: 2 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGAGLWE*TEILAH Trigger: ATGCGCCAGAATTTCTGTCCATTCCCAAAGACCGGC...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACTGAGTACAGCTGCATGGGGGAGGGAACCACTGAGGAGTTCAAAGGGTATCCAAGAACACATCTaGGTGAAGGAGGCAGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: FSLSTAAWGREPLRSSKGIQEHI*VKEAVF Trigger: AAAGACTGCCTCCTTCACTCAGATGTGTTCTTGGAT...ACCCTTTGAACTCCTCAGTGGTTCCCTCCCCCATGCAGCTGTACTCAGTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACTGAGTACAGCTGCATGGGGGAGGGAACCACTGAGGAGTTCAAAGGGTACCACATGCATTGTCTaGGATCCAAGAACACATCTG | + |
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Preference number: 2 (lower is better) Translates to: FSLSTAAWGREPLRSSKGTTCIV*DPRTHL Trigger: CAGATGTGTTCTTGGATCTCAGACAATGCATGTGGT...ACCCTTTGAACTCCTCAGTGGTTCCCTCCCCCATGCAGCTGTACTCAGTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTAGCAGAATGTGGAGACTaGAGAGAGGGTGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VFPQARFMLPYHAKKGTLAECGD*REGAGR Trigger: CCTGCCTGCACCCTCTCTTCAGTCTCCACATTCTGC...TAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | GAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTGTCAACGATGGGCTAGCCACCTaGGCAAAATCAACTTGTACT | + |
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Preference number: 2 (lower is better) Translates to: EGGIQKNPRCPVSAHGVNDGLAT*AKSTCT Trigger: AGTACAAGTTGATTTTGCGCAGGTGGCTAGCCCATC...GTTGACACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGCTAGGACATGGGCTCTaGAGCTCCCCAGCCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKLGHGL*SSPATC Trigger: GCAGGTGGCTGGGGAGCTCCAGAGCCCATGTCCTAG...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTAATGGACAGAAATTCTaGCGCATCTGTGGAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGNGQKF*RICGER Trigger: CCTCTCTCCACAGATGCGCCAGAATTTCTGTCCATT...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTCTCACAGGAAGGGAATaGGAACGTAGCCTTTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGLTGRE*ERSLLK Trigger: TTTCAAAAGGCTACGTTCTCATTCCCTTCCTGTGAG...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTGAACCCCAGAGATGTTaGAGAATGTGGAGACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KPAGVLLPCCLRALKRVLEPQRC*RMWRLK Trigger: CTTCAGTCTCCACATTCTGCAACATCTCTGGGGTTC...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGCTAGGACATGGGCTCTaGAGCTCCCCAGCCACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWLGHGL*SSPATC Trigger: GCAGGTGGCTGGGGAGCTCCAGAGCCCATGTCCTAG...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTAAGAACACATCTGAGTaGAGGAGGCAGTCTTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KPAGVLLPCCLRALKRVLKNTSE*RRQSFP Trigger: AGGAAAAGACTGCCTCCTTCACTCAGATGTGTTCTT...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGTTGACCCTGAACTTCTaGTCCTCCTGCCTGGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: SKIHASIPCKEGYPTMVLLTLNF*SSCLVT Trigger: GGTAACCAGGCAGGAGGATCAGAAGTTCAGGGTCAA...CAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTGTTTGGTGCACAAAGCTaGAGGATTTCACATGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TSSLLRDTGKPNGRLEILFGAQS*RISHGR Trigger: TCTGCCATGTGAAATCCTTCAGCTTTGTGCACCAAA...CAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR GCA 90 bp | TTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGTCACCTTAAGGAAAAGCTCCCCAGCCACCTaGATTGCTCTATCTGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FHTMQRRVPYYGTVTLRKSSPAT*IALSAS Trigger: GGAAGCAGATAGAGCAATGCAGGTGGCTGGGGAGCT...TTTCCTTAAGGTGACAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTAATCGAGTTACACCCTaGCCCCCGATATTTAGATTA | + |
|
Preference number: 2 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGNRVTP*PPIFRL Trigger: TAATCTAAATATCGGGGGCCAGGGTGTAACTCGATT...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | CCGTCATGCATCCATTTTGTTTCCATCCTCACAAGAATTACTCATGTTCTATATGGGACAGCTAGGACATaGGCTCTGGAGCTCCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PSCIHFVSILTRITHVLYGTART*ALELPS Trigger: GCTGGGGAGCTCCAGAGCCCATGTCCTAGCTGTCCC...ATATAGAACATGAGTAATTCTTGTGAGGATGGAAACAAAATGGATGCATGACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTATGGTGGCTTCCTGAGTaGCTCTTTCGAACTCTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: VFPQARFMLPYHAKKGTLWWLPE*LFRTLA Trigger: TGCGAGAGTTCGAAAGAGCCACTCAGGAAGCCACCA...TAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR CAA 90 bp | GAACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTaGAAATTCTGCAGATACAGTTTGAACTCGAAAAGCAAGAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: EPLLFSGTLGNRTGD*KFCRYSLNSKSKKV Trigger: CACCTTCTTGCTTTTCGAGTTCAAACTGTATCTGCAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTGTCAACGGTTCTTGCTATCTGTaGGATTATTTAACCACATGC | + |
|
Preference number: 2 (lower is better) Translates to: EGGIQKNPRCPVSAHGVNGSCYL*DYLTTC Trigger: GCATGTGGTTAAATAATCTCACAGATAGCAAGAACC...GTTGACACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | GCATTTCCTTTCCTGAGGTTGAAGGTCACGAGTCAGGAAGGGACAGCTAGGACATCAGGCTCCAAATCCTaGGTCAGACTAAATCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: AFPFLRLKVTSQEGTARTSGSKS*VRLNQN Trigger: ATTTTGATTTAGTCTGACTCAGGATTTGGAGCCTGA...TGTCCTAGCTGTCCCTTCCTGACTCGTGACCTTCAACCTCAGGAAAGGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGGCAGAATGTGGAGACTaGAGAGAGGGTGCAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWAECGD*REGAGR Trigger: CCTGCCTGCACCCTCTCTTCAGTCTCCACATTCTGC...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTGAATTCCGCGTCCTCTaGAAGTGGAATTTTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: KPAGVLLPCCLRALKRVLEFRVL*KWNFAF Trigger: AAAAGCAAAATTCCACTTTCAGAGGACGCGGAATTC...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTATTGTTGGTGGCTTCCTaGGTGGCTCTTTCGAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: VFPQARFMLPYHAKKGTLLLVAS*VALSNS Trigger: AGAGTTCGAAAGAGCCACTCAGGAAGCCACCAACAA...TAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGCCCAGCCACCTGCATTaGTCTATCTGCTTCCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKPSHLH*SICFPS Trigger: GGAAGGGAAGCAGATAGAGCAATGCAGGTGGCTGGG...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | CTAATGAAATATATCCAGAATCCCACCCCTTCCCTATTTGTAACACAGGCAAACTCTGATCCTCCTGCCTaGTTACCATGGCTGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: LMKYIQNPTPSLFVTQANSDPPA*LPWLGW Trigger: CCATCCCAGCCATGGTAACCAGGCAGGAGGATCAGA...GTTTGCCTGTGTTACAAATAGGGAAGGGGTGGGATTCTGGATATATTTCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | ACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATGATCATTAATTGCACTTaGAGCCTCAAGAAGTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: TPQNLDPGKRRERDAAAMIINCT*SLKKLV Trigger: AACCAACTTCTTGAGGCTCCAAGTGCAATTAATGAT...CATGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGACATGGACTGTGAGGTTCTCCATGAAGTCACACCCTCTTACATCGTGAAGAATCGAGTTACACCCTaGCCCCCGATATTTAGATTA | + |
|
Preference number: 2 (lower is better) Translates to: RDMDCEVLHEVTPSYIVKNRVTP*PPIFRL Trigger: TAATCTAAATATCGGGGGCCAGGGTGTAACTCGATT...CTTCACGATGTAAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR CAA 90 bp | ATTCCACATTGTATTAGTTGTGGTCATAAGTCATCCAGGCAAGATTaGAGAAGCCACCAGGGCACAAAAAGGGGAAGCGAAGAGACGCAA | + |
|
Preference number: 2 (lower is better) Translates to: IPHCISCGHKSSRQD*RSHQGTKRGSEETQ Trigger: TTGCGTCTCTTCGCTTCCCCTTTTTGTGCCCTGGTGGCTTCTCAAATCTTGCCTGGATGACTTATGACCACAACTAATACAATGTGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR CAA 90 bp | ACACTGGGAAACCGAACGGGAGACTTGAAATTCTGCAGATACAGTTaGAACTCGAAAAGCAAGAAGGTGGGGAGGCTTAGTCTAAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: TLGNRTGDLKFCRYS*NSKSKKVGRLSLSI Trigger: AATGCTTAGACTAAGCCTCCCCACCTTCTTGCTTTTCGAGTTCAAACTGTATCTGCAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGAATATCTGGGTGTTCCTAAGAGTAAACCAGGAGGCGTGGCTTCTCTTCGGTTCTTGCTATCTGTaGGATTATTTAACCACATGC | + |
|
Preference number: 2 (lower is better) Translates to: SRNIWVFLRVNQEAWLLFGSCYL*DYLTTC Trigger: GCATGTGGTTAAATAATCTCACAGATAGCAAGAACC...GAAGAGAAGCCACGCCTCCTGGTTTACTCTTAGGAACACCCAGATATTCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | ACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTGTCAGGCTCCAAATCCTaGGTCAGACTAAATCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TSSLLRDTGKPNGRLEILSGSKS*VRLNQN Trigger: ATTTTGATTTAGTCTGACTCAGGATTTGGAGCCTGA...CAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTAAACTTTGCAGGTCCCTaGAGAGAAGATGTCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: VFPQARFMLPYHAKKGTLNFAGP*REDVCL Trigger: GAGACAGACATCTTCTCTTCAGGGACCTGCAAAGTT...TAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | CCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGCCCTTCATTCAGCAATaGGAGCAAGACAAAAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTSKIHASIPCKEGYPTMPFIQQ*EQDKKG Trigger: TCCCTTTTTGTCTTGCTCTCATTGCTGAATGAAGGG...CATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTGGAGTTCAAAGGGTTTaGGAAAAGATTACGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KPAGVLLPCCLRALKRVLGVQRV*EKITVF Trigger: GAAAACCGTAATCTTTTCTCAAACCCTTTGAACTCC...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR TCA 90 bp | AGGGACATGGACTGTGAGGTTCTCCATGAAGTCACACCCTCTTACATCGTGAAGTGTAGACAGAAAAACTaGACACATAGGCGTTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: RDMDCEVLHEVTPSYIVKCRQKN*THRRWL Trigger: TAACCAACGCCTATGTGTTCAGTTTTTCTGTCTACA...CTTCACGATGTAAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | GCATTTCCTTTCCTGAGGTTGAAGGTCACGAGTCAGGAAGGGACAGCTAGGACAGACATTATCATTAATTaGACTTGGAGCCTCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AFPFLRLKVTSQEGTARTDIIIN*TWSLKK Trigger: CTTCTTGAGGCTCCAAGTGCAATTAATGATAATGTC...TGTCCTAGCTGTCCCTTCCTGACTCGTGACCTTCAACCTCAGGAAAGGAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGATTACGGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAACCCAGCCACCTGCATTaGTCTATCTGCTTCCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KDYGFPTSKIHASIPCKEPSHLH*SICFPS Trigger: GGAAGGGAAGCAGATAGAGCAATGCAGGTGGCTGGG...TTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | ACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTGTCAAATAACTCAGGCTaGCCTCAAACTCTGTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: TSSLLRDTGKPNGRLEILSNNSG*PQTLYV Trigger: TACATACAGAGTTTGAGGCCAGCCTGAGTTATTTGA...CAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | ACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTGCTCAATTTCCTCAAGTaGGAGACTGTCAATGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: TSSLLRDTGKPNGRLEILLNFLK*ETVNEF Trigger: GAATTCATTGACAGTCTCCCACTTGAGGAAATTGAG...CAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | CCGTCATGCATCCATTTTGTTTCCATCCTCACAAGAATTACTCATGTTCTATATATTCTGGCGCATCTGTaGAGAGAGGGGTGGATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PSCIHFVSILTRITHVLYILAHL*REGWMG Trigger: CCCCATCCACCCCTCTCTCCACAGATGCGCCAGAAT...ATATAGAACATGAGTAATTCTTGTGAGGATGGAAACAAAATGGATGCATGACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
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| 3UTR-3UTR GCA 90 bp | TATTCAAAGCAGCTAATGAAATATATCCAGAATCCCACCCCTTCCCTATTTGTAAGCTCCCCAGCCACCTaGATTGCTCTATCTGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YSKQLMKYIQNPTPSLFVSSPAT*IALSAS Trigger: GGAAGCAGATAGAGCAATGCAGGTGGCTGGGGAGCT...TACAAATAGGGAAGGGGTGGGATTCTGGATATATTTCATTAGCTGCTTTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTTCTGATCCTCCTGCCTaGTTACCATGGCTGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: CCLRALKRVLIKMPLKVCSDPPA*LPWLGW Trigger: CCATCCCAGCCATGGTAACCAGGCAGGAGGATCAGA...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | CTAATGAAATATATCCAGAATCCCACCCCTTCCCTATTTGTAACACAGGCAAACGTAAACCAGGAGGCGTaGCTTCTCTTCTGTGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LMKYIQNPTPSLFVTQANVNQEA*LLFCVV Trigger: AACCACACAGAAGAGAAGCCACGCCTCCTGGTTTAC...GTTTGCCTGTGTTACAAATAGGGAAGGGGTGGGATTCTGGATATATTTCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CCA 90 bp | CCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGGGAGAATATACTCCCTaGTCTGTTTTGCTTCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PTSKIHASIPCKEGYPTMGEYTP*SVLLPL Trigger: CAAAGGAAGCAAAACAGACCAGGGAGTATATTCTCC...CATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTGAAGCGAAACGACACTTaGAAATCAAGGTTCAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TSSLLRDTGKPNGRLEILKRNDT*KSRFRK Trigger: TTTTCTGAACCTTGATTTCCAAGTGTCGTTTCGCTT...CAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGCAATCTTCTTGTTGGTaGCTTCCTGAGTGGCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SKIHASIPCKEGYPTMVLQSSCW*LPEWLF Trigger: AAAGAGCCACTCAGGAAGCCACCAACAAGAAGATTG...CAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGATTACGGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGAACTTTGCAGGTCCCTaGAGAGAAGATGTCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KITVFPQARFMLPYHAKKNFAGP*REDVCL Trigger: GAGACAGACATCTTCTCTTCAGGGACCTGCAAAGTT...CTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTAGAATTCCGCGTCCTCTaGAAGTGGAATTTTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VFPQARFMLPYHAKKGTLEFRVL*KWNFAF Trigger: AAAAGCAAAATTCCACTTTCAGAGGACGCGGAATTC...TAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGGATGGGCTAGCCACCTaGGCAAAATCAACTTGTACT | + |
|
Preference number: 2 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKDGLAT*AKSTCT Trigger: AGTACAAGTTGATTTTGCGCAGGTGGCTAGCCCATC...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCTTTTGAAAGCCAGACATTCTCACTGAGTACAGCTGCATGGGGGAGGGAAATCATTAATTGCACTTaGAGCCTCAAGAAGTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FAFESQTFSLSTAAWGREIINCT*SLKKLV Trigger: AACCAACTTCTTGAGGCTCCAAGTGCAATTAATGAT...TTCCCTCCCCCATGCAGCTGTACTCAGTGAGAATGTCTGGCTTTCAAAAGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGCGAGTTACTCTGATTTaGGCCGACATGGCTTTTCGG | + |
|
Preference number: 2 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWRVTLI*ADMAFR Trigger: CCGAAAAGCCATGTCGGCCCAAATCAGAGTAACTCG...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGAAGAACACATCTGAGTaGAGGAGGCAGTCTTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKKNTSE*RRQSFP Trigger: AGGAAAAGACTGCCTCCTTCACTCAGATGTGTTCTT...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR GCA 90 bp | CCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGGACATTATCATTAATTaGACTTGGAGCCTCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PTSKIHASIPCKEGYPTMDIIIN*TWSLKK Trigger: CTTCTTGAGGCTCCAAGTGCAATTAATGATAATGTC...CATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGCTAAGAGAATGGTGGTaGTTCCTAAAGCCTGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKLREWW*FLKPGD Trigger: ATCACCAGGCTTTAGGAAGCACCACCATTCTCTTAG...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATTACGGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAACTGCATTGCTCTATCTaGTTCCCTTCCTTGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: KDYGFPTSKIHASIPCKELHCSI*FPSLWV Trigger: AACCCACAAGGAAGGGAAGCAGATAGAGCAATGCAG...TTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCCCGATATTTAGATTATAAGGAAGGCCTAAGAGAATGGTGGTGCTTCCTAATTTCCAGGAATATCTaGGTGTTCCTAAGAGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GPRYLDYKEGLREWWCFLISRNI*VFLRVN Trigger: GTTTACTCTTAGGAACACCCAGATATTCCTGGAAAT...TAGGAAGCACCACCATTCTCTTAGGCCTTCCTTATAATCTAAATATCGGGGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATTACGGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAATCCAAGAACACATCTaGGTGAAGGAGGCAGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KDYGFPTSKIHASIPCKEIQEHI*VKEAVF Trigger: AAAGACTGCCTCCTTCACTCAGATGTGTTCTTGGAT...TTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | CTAATGAAATATATCCAGAATCCCACCCCTTCCCTATTTGTAACACAGGCAAACTTTTCACATTCACTATaGTGCTGTGTGGCACACGTA | + |
|
Preference number: 2 (lower is better) Translates to: LMKYIQNPTPSLFVTQANFSHSL*CCVAHV Trigger: TACGTGTGCCACACAGCATCATAGTGAATGTGAAAA...GTTTGCCTGTGTTACAAATAGGGAAGGGGTGGGATTCTGGATATATTTCATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTAGATGTTGCAGAATGTaGAGACTGAAGAGAGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: CCLRALKRVLIKMPLKVCRCCRM*RLKRGC Trigger: GCACCCTCTCTTCAGTCTCCACATTCTGCAACATCT...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGGGAGAATATACTCCCTaGTCTGTTTTGCTTCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWGEYTP*SVLLPL Trigger: CAAAGGAAGCAAAACAGACCAGGGAGTATATTCTCC...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CAA 90 bp | CCTCACAAGAATTACTCATGTTCTATATACATATTCCTCAAATGCTaGGATCCCGCAATAGCAGATTCACATAAGGACAAAGCGAAACGA | + |
|
Preference number: 2 (lower is better) Translates to: PHKNYSCSIYIFLKC*DPAIADSHKDKAKR Trigger: TCGTTTCGCTTTGTCCTTATGTGAATCTGCTATTGCGGGATCCAAGCATTTGAGGAATATGTATATAGAACATGAGTAATTCTTGTGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTTTTTCACATTCACTATaGTGCTGTGTGGCACACGTA | + |
|
Preference number: 2 (lower is better) Translates to: CCLRALKRVLIKMPLKVCFSHSL*CCVAHV Trigger: TACGTGTGCCACACAGCATCATAGTGAATGTGAAAA...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGGGAAGCGAAGAGACGCAAACAGATGGGTGCTTTATTAAATTTTGTGAAATCTGTGGGTTTTGTTTaGTTGTTCTTGAGACAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KGEAKRRKQMGALLNFVKSVGFV*LFLRQC Trigger: ACACTGTCTCAAGAACAATCAAACAAAACCCACAGA...TTTCACAAAATTTAATAAAGCACCCATCTGTTTGCGTCTCTTCGCTTCCCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGTCTGTGGGTTTTGTTTaGTTGTTCTTGAGACAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWSVGFV*LFLRQC Trigger: ACACTGTCTCAAGAACAATCAAACAAAACCCACAGA...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGGGAGTTCAAAGGGTTTaGGAAAAGATTACGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWGVQRV*EKITVF Trigger: GAAAACCGTAATCTTTTCTCAAACCCTTTGAACTCC...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR GCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTTTTCCCCCTCAAACATaGTTAGCAATTCAAGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CCLRALKRVLIKMPLKVCFPPQT*LAIQVL Trigger: CAGAACTTGAATTGCTAAGCATGTTTGAGGGGGAAA...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTCTCAATTTCCTCAAGTaGGAGACTGTCAATGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: CCLRALKRVLIKMPLKVCLNFLK*ETVNEF Trigger: GAATTCATTGACAGTCTCCCACTTGAGGAAATTGAG...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTGTTTGTTATGAGCCATaGAAGAAAAACCACATGACT | + |
|
Preference number: 2 (lower is better) Translates to: CCLRALKRVLIKMPLKVCVCYEP*KKNHMT Trigger: AGTCATGTGGTTTTTCTTTCATGGCTCATAACAAAC...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR GCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTATGATACAGTTTTGGTaGACAAAGCTGAAGGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: CCLRALKRVLIKMPLKVCMIQFW*TKLKDF Trigger: GAAATCCTTCAGCTTTGTGCACCAAAACTGTATCAT...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CCA 90 bp | CCGTCATGCATCCATTTTGTTTCCATCCTCACAAGAATTACTCATGTTCTATATATTTCCAGGAATATCTaGGTGTTCCTAAGAGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PSCIHFVSILTRITHVLYISRNI*VFLRVN Trigger: GTTTACTCTTAGGAACACCCAGATATTCCTGGAAAT...ATATAGAACATGAGTAATTCTTGTGAGGATGGAAACAAAATGGATGCATGACGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | GGGAGAGGGCGTGAACCCCAGAGATGTTGCAGAATGTaGAGACTGAAGAGAGGGTGCAGGCAGGGTCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: GRGREPQRCCRM*RLKRGCRQGPP Trigger: CGGTGGACCCTGCCTGCACCCTCTCTTCAGTCTCCACATTCTGCAACATCTCTGGGGTTCACGCCCTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | CTGGGCCATGGGAGAGGGCGTGAACCCCAGAGATGTTaGAGAATGTGGAGACTGAAGAGAGGGTGCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGHGRGREPQRC*RMWRLKRGCRQ Trigger: CTGCCTGCACCCTCTCTTCAGTCTCCACATTCTGCAACATCTCTGGGGTTCACGCCCTCTCCCATGGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCACTTTGGTGCTAGGCTaGAGGGGCCAGCATCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: STCTTRKPRSPPQPASACTLVLG*RGQHLG Trigger: GCCCAGATGCTGGCCCCTCAAGCCTAGCACCAAAGT...GCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCAAACTTTGGTGCTAGGCTaGAGGGGCCAGCATCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NLYYTKTEEPTPARISLQTLVLG*RGQHLG Trigger: GCCCAGATGCTGGCCCCTCAAGCCTAGCACCAAAGT...TTGCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | CTTGAGGGGCCAGCATCTGGGCCATGGGAGAGGGCGTaGACCCCAGAGATGTTGCAGAATGTGGAGACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LEGPASGPWERA*TPEMLQNVETE Trigger: TTCAGTCTCCACATTCTGCAACATCTCTGGGGTTCACGCCCTCTCCCATGGCCCAGATGCTGGCCCCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | TTGAAGGTCACGAGTCAGGAAGGGACAGCTAGGACATaGGCTCTGGAGCTCCCCAGCCACCTGCATTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LKVTSQEGTART*ALELPSHLHCS Trigger: AGAGCAATGCAGGTGGCTGGGGAGCTCCAGAGCCCATGTCCTAGCTGTCCCTTCCTGACTCGTGACCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | CAGCTAGGACATGGGCTCTGGAGCTCCCCAGCCACCTaGATTGCTCTATCTGCTTCCCTTCCTTGTGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QLGHGLWSSPAT*IALSASLPCGF Trigger: AAACCCACAAGGAAGGGAAGCAGATAGAGCAATGCAGGTGGCTGGGGAGCTCCAGAGCCCATGTCCTAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
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| 3UTR-3UTR CAA 90 bp | GGCGTGGTGTTACTGGAAAAACTAGGTGCCAGATGGGCTAGCCACCTGCGCAAACCAGCCCGCATCAGCTaGCAAATGGTAAGCAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GVVLLEKLGARWASHLRKPARIS*QMVSRY Trigger: GTACCTGCTTACCATTTGCAAGCTGATGCGGGCTGG...TTTGCGCAGGTGGCTAGCCCATCTGGCACCTAGTTTTTCCAGTAACACCACGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | ACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATaGCACACCAAGATCGCAGGGATATTTCCTATTCGG | + |
|
Preference number: 3 (lower is better) Translates to: TQESAEREMLLP*HTKIAGIFPIR Trigger: CCGAATAGGAAATATCCCTGCGATCTTGGTGTGGCATGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTCCGAGTTACTCTGATTaGGGCCGACATGGCTTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGPSYSD*GRHGFS Trigger: CGAAAAGCCATGTCGGCCCAAATCAGAGTAACTCGG...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCTTTACCCTTTTACCATaGAGGTCCACATCAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: STCTTRKPRSPPQPASACFTLLP*RSTSDS Trigger: TGAGTCTGATGTGGACCTCAATGGTAAAAGGGTAAA...GCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | ACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATGTTTCCTTTCCTGAGGTaGAAGGTCACGAGTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TPQNLDPGKRRERDAAAMFPFLR*KVTSQE Trigger: TTCCTGACTCGTGACCTTCAACCTCAGGAAAGGAAA...CATGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTAAACACCACAAAACCTaGACCCAGGAAAGCGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGKHHKT*TQESAE Trigger: CTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGTTT...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACATGGACTGTGAGGTTCTCCATGAAGTCACACCCTCTTACATCGTGAAGTTCCGGGGCCGGTCTTaGGGAATGGACAGAAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RDMDCEVLHEVTPSYIVKFRGRS*GMDRNS Trigger: AGAATTTCTGTCCATTCCCAAAGACCGGCCCCGGAA...CTTCACGATGTAAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | AGGTTAGCGCTGCAGTTGGTGTCAAAAGTCCCGGGCTaGCTACAAAGGAGAGAGAACTCACAGGAAGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RLALQLVSKVPG*LQRRENSQEGN Trigger: ATTCCCTTCCTGTGAGTTCTCTCTCCTTTGTAGTCAGCCCGGGACTTTTGACACCAACTGCAGCGCTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | AGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTaGCCATGGTGTCAACACAGTGCCACACTTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RWNTEEPKVSCV*PWCQHSATLWS Trigger: AGACCAAAGTGTGGCACTGTGTTGACACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | CCTGCGATTCCACTCCTCCCGCCTGCCTGTATTTACTaGATTCCAGGGACACAGGCAATAGCTGGATTATTT | + |
|
Preference number: 3 (lower is better) Translates to: PAIPLLPPACIY*IPGTQAIAGLF Trigger: AAATAATCCAGCTATTGCCTGTGTCCCTGGAATCCAGTAAATACAGGCAGGCGGGAGGAGTGGAATCGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | AAATGGCCGGTGGGAAAACGCCAATCTTCTTGTTGGTaGCTTCCTGAGTGGCTCTTTCGAACTCTCGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: KWPVGKRQSSCW*LPEWLFRTLAL Trigger: AAGTGCGAGAGTTCGAAAGAGCCACTCAGGAAGCCACCAACAAGAAGATTGGCGTTTTCCCACCGGCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTCTCACAAGTCAAACTTaGCAGGTCCCTGAAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGLTSQT*QVPEEK Trigger: CTTCTCTTCAGGGACCTGCAAAGTTTGACTTGTGAG...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTGTGTCCTGTTACCCTGTaGTCTCAGAGCACTGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSSLLRDTGKPNGRLEILCPVTL*SQSTEE Trigger: CTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACA...CAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | ATGGATGAAGCTCACAAGTCAAACTTTGCAGGTCCCTaGAGAGAAGATGTCTGTCTCACCTGGGGCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MDEAHKSNFAGP*REDVCLTWGSL Trigger: CAGAGAGCCCCAGGTGAGACAGACATCTTCTCTTCAGGGACCTGCAAAGTTTGACTTGTGAGCTTCATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | GGTGGGAAAACGCCAATCTTCTTGTTGGTGGCTTCCTaGGTGGCTCTTTCGAACTCTCGCACTTCATCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GGKTPIFLLVAS*VALSNSRTSSI Trigger: AATGGATGAAGTGCGAGAGTTCGAAAGAGCCACTCAGGAAGCCACCAACAAGAAGATTGGCGTTTTCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | TTTGAAAGCCAGACATTCTCACTGAGTACAGCTGCATaGGGGAGGGAACCACTGAGGAGTTCAAAGGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FESQTFSLSTAA*GREPLRSSKGL Trigger: CAAACCCTTTGAACTCCTCAGTGGTTCCCTCCCCCATGCAGCTGTACTCAGTGAGAATGTCTGGCTTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | AGTGGCGTGGTGTTACTGGAAAAACTAGGTGCCAGATaGGCTAGCCACCTGCGCAAAATCAACTTGTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: SGVVLLEKLGAR*ASHLRKINLYY Trigger: GTAGTACAAGTTGATTTTGCGCAGGTGGCTAGCCCATCTGGCACCTAGTTTTTCCAGTAACACCACGCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | AATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATaGTGTCAACACAGTGCCACACTTTGGTCTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: NTEEPKVSCVCP*CQHSATLWSHQ Trigger: TTGGTGAGACCAAAGTGTGGCACTGTGTTGACACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGTCACCTTAAGGAAACCCCAGCCACCTGCATaGCTCTATCTGCTTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FHTMQRRVPYYGTVTLRKPQPPA*LYLLPF Trigger: GAAGGGAAGCAGATAGAGCAATGCAGGTGGCTGGGG...TTTCCTTAAGGTGACAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | GACATTTATGATCACACCTCTGTACAAATAGGAGCCTaGGATTCCACTCCTCCCGCCTGCCTGTATTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: DIYDHTSVQIGA*DSTPPACLYLL Trigger: CAGTAAATACAGGCAGGCGGGAGGAGTGGAATCGCAGGCTCCTATTTGTACAGAGGTGTGATCATAAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | CAAGGTGTCCTGTGTCTGCCCATGGTGTCAACACAGTaGCACACTTTGGTCTCACCAAGAATAAAGAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGVLCLPMVSTQ*HTLVSPRIKSL Trigger: TAAGCTCTTTATTCTTGGTGAGACCAAAGTGTGGCACTGTGTTGACACCATGGGCAGACACAGGACACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | AATATCTGGGTGTTCCTAAGAGTAAACCAGGAGGCGTaGCTTCTCTTCTGTGTGGTTCAGACACTGGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: NIWVFLRVNQEA*LLFCVVQTLAS Trigger: ACTAGCCAGTGTCTGAACCACACAGAAGAGAAGCCACGCCTCCTGGTTTACTCTTAGGAACACCCAGATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | CAAGATCGCAGGGATATTTCCTATTCGGAAGCCACCTaGAGTCAAGACACATGTGGCCATTTTAGTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: QDRRDISYSEAT*SQDTCGHFSGI Trigger: GATGCCACTAAAATGGCCACATGTGTCTTGACTCCAGGTGGCTTCCGAATAGGAAATATCCCTGCGATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCCAGATGGGCTAGCCACCTGCGCAAAATCAACTTGTACTACACGAAAACCTTCTGTGGGTTTTGTTaGATTGTTCTTGAGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GARWASHLRKINLYYTKTFCGFC*IVLETV Trigger: CACTGTCTCAAGAACAATCAAACAAAACCCACAGAA...GGTTTTCGTGTAGTACAAGTTGATTTTGCGCAGGTGGCTAGCCCATCTGGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCAAGTGGAATTTTGCTTTaGAAAGCCAGACATTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KHHKTLTQESAEREMLLPSGILL*KARHSH Trigger: GTGAGAATGTCTGGCTTTCAAAAGCAAAATTCCACT...TGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | GTATTAGTTGTGGTCATAAGTCATCCAGGCAAGATTTaGGAAGCCACCAGGGCACAAAAAGGGGAAGCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLVVVISHPGKI*EATRAQKGEAK Trigger: CTTCGCTTCCCCTTTTTGTGCCCTGGTGGCTTCTCAAATCTTGCCTGGATGACTTATGACCACAACTAATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | GGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTaGAGATACAGTTTGAACTCGAAAAGCAAGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GTLGNRTGDLKF*RYSLNSKSKKV Trigger: CACCTTCTTGCTTTTCGAGTTCAAACTGTATCTGCAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | CCCCGATATTTAGATTATAAGGAAGGCCTAAGAGAATaGTGGTGCTTCCTAAAGCCTGGTGATGGGCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: PRYLDYKEGLRE*WCFLKPGDGQT Trigger: GGTTTGCCCATCACCAGGCTTTAGGAAGCACCACCATTCTCTTAGGCCTTCCTTATAATCTAAATATCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTGGATTATTTCCTTTTTaGCAGGGTTATGGATCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KPAGVLLPCCLRALKRVLGLFPF*QGYGSV Trigger: GACTGATCCATAACCCTGCAAAAAAGGAAATAATCC...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTCCCCAGCCACCTGCATaGCTCTATCTGCTTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CCLRALKRVLIKMPLKVCPQPPA*LYLLPF Trigger: GAAGGGAAGCAGATAGAGCAATGCAGGTGGCTGGGG...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTAGGAGTTCAAAGGGTTaGAGAAAAGATTACGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGRSSKG*RKDYGF Trigger: AAAACCGTAATCTTTTCTCAAACCCTTTGAACTCCT...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACATGGACTGTGAGGTTCTCCATGAAGTCACACCCTCTTACATCGTGAAGAGTGGAATTTTGCTTTaGAAAGCCAGACATTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RDMDCEVLHEVTPSYIVKSGILL*KARHSH Trigger: GTGAGAATGTCTGGCTTTCAAAAGCAAAATTCCACT...CTTCACGATGTAAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | CACATGCATTGTCTGAGATCCAAGAACACATCTGAGTaGAGGAGGCAGTCTTTTCCTCGTCCAGAGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: HMHCLRSKNTSE*RRQSFPRPENS Trigger: AGAATTCTCTGGACGAGGAAAAGACTGCCTCCTTCACTCAGATGTGTTCTTGGATCTCAGACAATGCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | GTCACACCCTCTTACATCGTGAAGTCCTGTGGATCTTaGGCAGTAAGATATCATACTCAGACAGACCGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VTPSYIVKSCGS*AVRYHTQTDRF Trigger: AAAGCGGTCTGTCTGAGTATGATATCTTACTGCTCAAGATCCACAGGACTTCACGATGTAAGAGGGTGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | GGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATaGAAAGAAGGGTACCCTACTATGGTACTGTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GFPTSKIHASIP*KEGYPTMVLSP Trigger: AGGTGACAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGTCACCTTAAGGAAATTTCCTTTCCTGAGGTaGAAGGTCACGAGTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FHTMQRRVPYYGTVTLRKFPFLR*KVTSQE Trigger: TTCCTGACTCGTGACCTTCAACCTCAGGAAAGGAAA...TTTCCTTAAGGTGACAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTATGTAATTGCTTTCCTTaGAGTACTGGGGCGCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: VFPQARFMLPYHAKKGTLCNCFP*STGAQC Trigger: ACATTGCGCCCCAGTACTCAAAGGAAAGCAATTACA...TAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCTTCTCTTCTCAGGGACACTGGGAAACCGAACGGGAGACTTGAAATTCTGTCTGAAAGTGGAATTTaGCTTTTGAAAGCCAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSLLRDTGKPNGRLEILSESGI*LLKARH Trigger: ATGTCTGGCTTTCAAAAGCAAAATTCCACTTTCAGA...CAGAATTTCAAGTCTCCCGTTCGGTTTCCCAGTGTCCCTGAGAAGAGAAGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACATGGACTGTGAGGTTCTCCATGAAGTCACACCCTCTTACATCGTGAAGGAGAGTCACTCTCCATaGGATTATTTGCTTATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RDMDCEVLHEVTPSYIVKESHSP*DYLLID Trigger: ATCTATAAGCAAATAATCCAATGGAGAGTGACTCTC...CTTCACGATGTAAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | TTGAGCAGTAAGATATCATACTCAGACAGACCGCTTTaGAGGTGGAATACAGAAGAACCCAAGGTGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSSKISYSDRPL*RWNTEEPKVSC Trigger: ACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCGGTCTGTCTGAGTATGATATCTTACTGCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | AAGCATTCATTAAAATGGGGTTACAGTGAAGGGACATaGACTGTGAGGTTCTCCATGAAGTCACACCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KHSLKWGYSEGT*TVRFSMKSHPL Trigger: AAGAGGGTGTGACTTCATGGAGAACCTCACAGTCCATGTCCCTTCACTGTAACCCCATTTTAATGAATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCCCGATATTTAGATTATAAGGAAGGCCTAAGAGAATGGTGGTGCTTCCTATTCTGTGGGTTTTGTTaGATTGTTCTTGAGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GPRYLDYKEGLREWWCFLFCGFC*IVLETV Trigger: CACTGTCTCAAGAACAATCAAACAAAACCCACAGAA...TAGGAAGCACCACCATTCTCTTAGGCCTTCCTTATAATCTAAATATCGGGGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGTTTACCCTTTTACCATaGAGGTCCACATCAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SKIHASIPCKEGYPTMVLFTLLP*RSTSDS Trigger: TGAGTCTGATGTGGACCTCAATGGTAAAAGGGTAAA...CAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | CTGACTACAAAGGAGAGAGAACTCACAGGAAGGGAATaGGAACGTAGCCTTTTGAAAGTGAACCAGATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTTKERELTGRE*ERSLLKVNQIV Trigger: AACAATCTGGTTCACTTTCAAAAGGCTACGTTCTCATTCCCTTCCTGTGAGTTCTCTCTCCTTTGTAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | TATTTAGATTATAAGGAAGGCCTAAGAGAATGGTGGTaGTTCCTAAAGCCTGGTGATGGGCAAACCATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YLDYKEGLREWW*FLKPGDGQTIS Trigger: GGAAATGGTTTGCCCATCACCAGGCTTTAGGAAGCACCACCATTCTCTTAGGCCTTCCTTATAATCTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | CGATATTTAGATTATAAGGAAGGCCTAAGAGAATGGTaGTGCTTCCTAAAGCCTGGTGATGGGCAAACCATT | + |
|
Preference number: 3 (lower is better) Translates to: RYLDYKEGLREW*CFLKPGDGQTI Trigger: AATGGTTTGCCCATCACCAGGCTTTAGGAAGCACCACCATTCTCTTAGGCCTTCCTTATAATCTAAATATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CCA 72 bp | ATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATaGTACTGTCACCTTAAGGAAAAGATGCGCTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: MLPYHAKKGTLL*YCHLKEKMRCY Trigger: ATAACAGCGCATCTTTTCCTTAAGGTGACAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR GCA 72 bp | GAGAAAAGATTACGGTTTTCCCACAAGCAAGATTCATaGTTCCATACCATGCAAAGAAGGGTACCCTACTAT | + |
|
Preference number: 3 (lower is better) Translates to: EKRLRFSHKQDS*FHTMQRRVPYY Trigger: ATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGATTACGGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGATTATTTCCTTTTTaGCAGGGTTATGGATCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KITVFPQARFMLPYHAKKGLFPF*QGYGSV Trigger: GACTGATCCATAACCCTGCAAAAAAGGAAATAATCC...CTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | GTCTATCCTCAATTTCCTCAAGTGGGAGACTGTCAATaGATTCTACTTAGCTTGTCGAAATTTCTGAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: VYPQFPQVGDCQ*ILLSLSKFLRI Trigger: GATTCTCAGAAATTTCGACAAGCTAAGTAGAATTCATTGACAGTCTCCCACTTGAGGAAATTGAGGATAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR TCA 72 bp | CAGTTTGACCACCAGAGATTTAGGACTGGTGGTGTGTaGCTTGCTATACTGCCTTTTATACATGTATATATA | + |
|
Preference number: 3 (lower is better) Translates to: QFDHQRFRTGGV*LAILPFIHVYI Trigger: TATATATACATGTATAAAAGGCAGTATAGCAAGTCACACACCACCAGTCCTAAATCTCTGGTGGTCAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTTCTGAAAGTGGAATTTaGCTTTTGAAAGCCAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: CCLRALKRVLIKMPLKVCSESGI*LLKARH Trigger: ATGTCTGGCTTTCAAAAGCAAAATTCCACTTTCAGA...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCACTGAGTACAGCTGCATGGGGGAGGGAACCACTGAGGAGTTCAAAGGGTTGCCCGTTGCCATGGTaGGGGTCCTCAAAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSTAAWGREPLRSSKGCPLPW*GSSKGS Trigger: CGAGCCCTTTGAGGACCCTCACCATGGCAACGGGCA...ACCCTTTGAACTCCTCAGTGGTTCCCTCCCCCATGCAGCTGTACTCAGTGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CAA 72 bp | ACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTaGCAAATGGTAAGCAGGTACAGACGCGAATTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TKTEEPTPARIS*QMVSRYRREFR Trigger: GCGGAATTCGCGTCTGTACCTGCTTACCATTTGCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR TCA 90 bp | TCAACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCCACAGGCGATATCGATaGAGCACACTTCTCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: STCTTRKPRSPPQPASACHRRYR*STLLSR Trigger: TCGAGAGAGAAGTGTGCTTCATCGATATCGCCTGTG...GCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CAA 72 bp | GACACAGAGGGCTGTGTGTGTGAGGGTCACTTTCGCTaGCGTTGCTTGCAACACTGTGCATTCGAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTEGCVCEGHFR*RCLQHCAFEHL Trigger: CAGGTGTTCGAATGCACAGTGTTGCAAGCAACGCAAGCGAAAGTGACCCTCACACACACAGCCCTCTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAATATCTGGGTGTTCCTAAGAGTAAACCAGGAGGCGTGGCTTCTCTTCTCTCCCCGGTCACTCTaGTCATGGCTGTGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRNIWVFLRVNQEAWLLFSPRSL*SWLCLL Trigger: CAGCAAACACAGCCATGAGCAGAGTGACCGGGGAGA...GAAGAGAAGCCACGCCTCCTGGTTTACTCTTAGGAACACCCAGATATTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTGTCAACTCAAAGGGCTCGTTCTaGACGACCTCTACCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGGIQKNPRCPVSAHGVNSKGSF*TTSTPS Trigger: AGAAGGGGTAGAGGTCGTGCAGAACGAGCCCTTTGA...GTTGACACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | TCAACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCTGGTTTCTATGTGGATaGAGAATTTCGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STCTTRKPRSPPQPASACWFLCG*RISAGR Trigger: CCTTCCTGCCGAAATTCTCCATCCACATAGAAACCA...GCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | TCCAGGAATATCTGGGTGTTCCTAAGAGTAAACCAGGAGGCGTGGCTTCTCTTCTCCGGGGCCGGTCTTTaGGAATGGACAGAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRNIWVFLRVNQEAWLLFSGAGL*EWTEIL Trigger: CAGAATTTCTGTCCATTCCCAAAGACCGGCCCCGGA...GAAGAGAAGCCACGCCTCCTGGTTTACTCTTAGGAACACCCAGATATTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR TCA 90 bp | AAGATTACGGTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGTGCCCGTTGCCATGGTaGGGGTCCTCAAAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KITVFPQARFMLPYHAKKCPLPW*GSSKGS Trigger: CGAGCCCTTTGAGGACCCTCACCATGGCAACGGGCA...CTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAACCGTAATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | ACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATGCAATCTTCTTGTTGGTaGCTTCCTGAGTGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPQNLDPGKRRERDAAAMQSSCW*LPEWLF Trigger: AAAGAGCCACTCAGGAAGCCACCAACAAGAAGATTG...CATGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR TCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGTGTACTCGTCCACGGTaGGCGGCATGCAGATTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKCTRPR*AACRFG Trigger: ACCGAATCTGCATGCCGCTCACCGTGGACGAGTACA...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS-3UTR GCA 90 bp | TTATGGATGAAGCTCACAAGTCAAACTTTGCAGGTCCCTGAAGAGAAGATGTCTTCTCCCCGGTCACTCTaGTCATGGCTGTGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWMKLTSQTLQVPEEKMSSPRSL*SWLCLL Trigger: CAGCAAACACAGCCATGAGCAGAGTGACCGGGGAGA...AGACATCTTCTCTTCAGGGACCTGCAAAGTTTGACTTGTGAGCTTCATCCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR GCA 90 bp | AGATGTCTGTCTCACCTGGGGCTCTCTGTTTCCGGAATATTCCACATTGTATTATCAAAGGGCTCGTTCTaGACGACCTCTACCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCLSHLGLSVSGIFHIVLSKGSF*TTSTPS Trigger: AGAAGGGGTAGAGGTCGTGCAGAACGAGCCCTTTGA...TAATACAATGTGGAATATTCCGGAAACAGAGAGCCCCAGGTGAGACAGACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR GCA 90 bp | TCAACTTGTACTACACGAAAACCGAGGAGCCCACCCCAGCCCGCATCAGCTTGCCAAAAATACTATCGTTaGTTCCCTTGTTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STCTTRKPRSPPQPASACQKYYR*FPCCLH Trigger: ATGAAGACAACAAGGGAAGCAACGATAGTATTTTTG...GCAAGCTGATGCGGGCTGGGGTGGGCTCCTCGGTTTTCGTGTAGTACAAGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR GCA 90 bp | CCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGTCTCGGACCACCTTGTaGACAAATTGTTCCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSKIHASIPCKEGYPTMSRTTL*TNCSTR Trigger: CCGAGTGGAACAATTTGTGCACAAGGTGGTCCGAGA...CATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGATTCTGGCGCATCTGTaGAGAGAGGGGTGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKILAHL*REGWMG Trigger: CCCCATCCACCCCTCTCTCCACAGATGCGCCAGAAT...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTTTGAAAGCCAGACATTCTCACTGAGTACAGCTGCATGGGGGAGGGAAAATGGACAGAAATTCTaGCGCATCTGTGGAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FAFESQTFSLSTAAWGRENGQKF*RICGER Trigger: CCTCTCTCCACAGATGCGCCAGAATTTCTGTCCATT...TTCCCTCCCCCATGCAGCTGTACTCAGTGAGAATGTCTGGCTTTCAAAAGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTACAGTGGAGGAGTGCTaGTTGCAAACTTTTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPAGVLLPCCLRALKRVLTVEEC*LQTFML Trigger: CAACATAAAAGTTTGCAATCAGCACTCCTCCACTGT...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTTACTTGGTTTCTATGTaGATGGAGAATTTCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPAGVLLPCCLRALKRVLYLVSM*MENFGR Trigger: CCTGCCGAAATTCTCCATCCACATAGAAACCAAGTA...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | ACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATGTGTTGTCTTCATACTTaGTTTCTATGTGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPQNLDPGKRRERDAAAMCCLHT*FLCGWR Trigger: TCTCCATCCACATAGAAACCAAGTATGAAGACAACA...CATGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | TTATGGATGAAGCTCACAAGTCAAACTTTGCAGGTCCCTGAAGAGAAGATGTCTTGGTGGCTTCCTGAGTaGCTCTTTCGAACTCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWMKLTSQTLQVPEEKMSWWLPE*LFRTLA Trigger: TGCGAGAGTTCGAAAGAGCCACTCAGGAAGCCACCA...AGACATCTTCTCTTCAGGGACCTGCAAAGTTTGACTTGTGAGCTTCATCCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR GCA 90 bp | TTATGGATGAAGCTCACAAGTCAAACTTTGCAGGTCCCTGAAGAGAAGATGTCTTCTCGGACCACCTTGTaGACAAATTGTTCCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWMKLTSQTLQVPEEKMSSRTTL*TNCSTR Trigger: CCGAGTGGAACAATTTGTGCACAAGGTGGTCCGAGA...AGACATCTTCTCTTCAGGGACCTGCAAAGTTTGACTTGTGAGCTTCATCCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR GCA 90 bp | AAACACCACAAAACCTTGACCCAGGAAAGCGCAGAGAGAGAGATGCTGCTGCCATGGAGGAGTGCTGATTaGAAACTTTTATGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHHKTLTQESAEREMLLPWRSAD*KLLCWF Trigger: AAACCAACATAAAAGTTTGCAATCAGCACTCCTCCA...TGGCAGCAGCATCTCTCTCTCTGCGCTTTCCTGGGTCAAGGTTTTGTGGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| 3UTR CAA 72 bp | AGTCACACCCTCTTACATCGTGAAGTCCTGTGGATCTaGAGCAGTAAGATATCATACTCAGACAGACCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHTLLHREVLWI*SSKISYSDRPL Trigger: AAGCGGTCTGTCTGAGTATGATATCTTACTGCTCAAGATCCACAGGACTTCACGATGTAAGAGGGTGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CAA 72 bp | AACCGAACGGGAGACTTGAAATTCTGCAGATACAGTTaGAACTCGAAAAGCAAGAAGGTGGGGAGGCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NRTGDLKFCRYS*NSKSKKVGRLS Trigger: ACTAAGCCTCCCCACCTTCTTGCTTTTCGAGTTCAAACTGTATCTGCAGAATTTCAAGTCTCCCGTTCGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR TCA 90 bp | CTAATGAAATATATCCAGAATCCCACCCCTTCCCTATTTGTAACACAGGCAAACCACAGGCGATATCGATaGAGCACACTTCTCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LMKYIQNPTPSLFVTQANHRRYR*STLLSR Trigger: TCGAGAGAGAAGTGTGCTTCATCGATATCGCCTGTG...GTTTGCCTGTGTTACAAATAGGGAAGGGGTGGGATTCTGGATATATTTCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR TCA 90 bp | TTATGGATGAAGCTCACAAGTCAAACTTTGCAGGTCCCTGAAGAGAAGATGTCTCATGGCTGTGTTTGCTaGTCATATACAGCTGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LWMKLTSQTLQVPEEKMSHGCVC*SYTAVR Trigger: TCGGACAGCTGTATATGATCAGCAAACACAGCCATG...AGACATCTTCTCTTCAGGGACCTGCAAAGTTTGACTTGTGAGCTTCATCCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | TGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGCAGGTACTGGTCTGTGCATaGCTCTCTATGTCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CTGMIQFWCTKLKDFTWQVLVCA*LSMSST Trigger: TGTGGATGACATAGAGAGCCATGCACAGACCAGTAC...CTGCCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS-3UTR TCA 90 bp | CTACTTAGCTTGTCGAAATTTCTGAGAATCGTTATGGATGAAGCTCACAAGTCATTGTTGGTGGCTTCCTaGGTGGCTCTTTCGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSLSKFLRIVMDEAHKSLLVAS*VALSNS Trigger: AGAGTTCGAAAGAGCCACTCAGGAAGCCACCAACAA...TGACTTGTGAGCTTCATCCATAACGATTCTCAGAAATTTCGACAAGCTAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR CCA 90 bp | AAAGGGGAAGCGAAGAGACGCAAACAGATGGGTGCTTTATTAAATTTTGTGAAAGCCGGTCTTTGGGAATaGACAGAAATTCTGGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGEAKRRKQMGALLNFVKAGLWE*TEILAH Trigger: ATGCGCCAGAATTTCTGTCCATTCCCAAAGACCGGC...TTTCACAAAATTTAATAAAGCACCCATCTGTTTGCGTCTCTTCGCTTCCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR TCA 90 bp | CCGTCATGCATCCATTTTGTTTCCATCCTCACAAGAATTACTCATGTTCTATATGCTTGTAGGAGCACATaGTGGGTTGATGGTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSCIHFVSILTRITHVLYACRST*WVDGCL Trigger: GAGACAACCATCAACCCATCATGTGCTCCTACAAGC...ATATAGAACATGAGTAATTCTTGTGAGGATGGAAACAAAATGGATGCATGACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGTGGTTTCTATGTGGATaGAGAATTTCGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKWFLCG*RISAGR Trigger: CCTTCCTGCCGAAATTCTCCATCCACATAGAAACCA...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | AGATGTCTGTCTCACCTGGGGCTCTCTGTTTCCGGAATATTCCACATTGTATTATGTTGTCTTCATACTTaGTTTCTATGTGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCLSHLGLSVSGIFHIVLCCLHT*FLCGWR Trigger: TCTCCATCCACATAGAAACCAAGTATGAAGACAACA...TAATACAATGTGGAATATTCCGGAAACAGAGAGCCCCAGGTGAGACAGACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGCTATGTCATCCACAGTaGAGGAGTGCTGATTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWLCHPQ*RSADCK Trigger: TTTGCAATCAGCACTCCTCCACTGTGGATGACATAG...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTTACTTGGTTTCTATGTaGATGGAGAATTTCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCLRALKRVLIKMPLKVCYLVSM*MENFGR Trigger: CCTGCCGAAATTCTCCATCCACATAGAAACCAAGTA...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | ATATGTACAGGTATGATACAGTTTTGGTGCACAAAGCTGAAGGATTTCACATGGTTTGTAGTAGCGTTCTaGAATTTCATCACAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ICTGMIQFWCTKLKDFTWFVVAF*NFITGD Trigger: ATCGCCTGTGATGAAATTCCAGAACGCTACTACAAA...CCATGTGAAATCCTTCAGCTTTGTGCACCAAAACTGTATCATACCTGTACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CAA 72 bp | TGCTTTCTCTTACTACAGCATAAAAGGAAACCCTCCTaGGGGGCGGTTTCAGACAAACTTTATACAATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLLLQHKRKPS*GAVSDKLYTIK Trigger: TTTTATTGTATAAAGTTTGTCTGAAACCGCCCCCAAGGAGGGTTTCCTTTTATGCTGTAGTAAGAGAAAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCTCAGAGCACTGAAGAGAGTTCTTATCAAAATGCCTCTTAAAGTTTGTTCACATAAAATATTTTaGGAACAACAGCTCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCLRALKRVLIKMPLKVCSHKIF*EQQLWP Trigger: GGGCCAGAGCTGTTGTTCCCAAAATATTTTATGTGA...ACAAACTTTAAGAGGCATTTTGATAAGAACTCTCTTCAGTGCTCTGAGACAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| 3UTR CAA 72 bp | ATAGCAGATTCACATAAGGACAAAGCGAAACGACACTaGGAAATCAAGGTTCAGAAAATATCGAAGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IADSHKDKAKRH*EIKVQKISKSF Trigger: AAATGACTTCGATATTTTCTGAACCTTGATTTCCAAGTGTCGTTTCGCTTTGTCCTTATGTGAATCTGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS TCA 90 bp | CTGTTGAGATACACTCGCTTCTCAGTGAACTGCCCGTTGCCATGGTaGGGGTCCTCAAAGGGCTCGTTCTGCACGACCTCTACCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLRYTRFSVNCPLPW*GSSKGSFCTTSTPS Trigger: AGAAGGGGTAGAGGTCGTGCAGAACGAGCCCTTTGAGGACCCTCACCATGGCAACGGGCAGTTCACTGAGAAGCGAGTGTATCTCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGTGTTACTGGAAAAACTAGGTGCCAGATGGGCTAGCCACCTGCGCAAACTAGGCAGCTTGCTGTaGAGATACACTCGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVVLLEKLGARWASHLRKLGSLL*RYTRFS Trigger: TGAGAAGCGAGTGTATCTCAACAGCAAGCTGCCTAG...TTTGCGCAGGTGGCTAGCCCATCTGGCACCTAGTTTTTCCAGTAACACCACGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCTGGTGTCCTGTTACCCTGTTGTCTCAGAGCACTGAAGAGAGTTCTTGGAGCACATGATGGGTaGATGGTTGTCTCGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPAGVLLPCCLRALKRVLGAHDG*MVVSPA Trigger: GGCTGGCGAGACAACCATCAACCCATCATGTGCTCC...AAGAACTCTCTTCAGTGCTCTGAGACAACAGGGTAACAGGACACCAGCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS TCA 90 bp | GAAATGGCCGGTGGGAAAACGCCAATCTTCTTGTTGGTGGCTTCCTaGGTGGCTCTTTCGAACTCTCGCACTTCATCCATTGTCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EMAGGKTPIFLLVAS*VALSNSRTSSIVMS Trigger: CGACATGACAATGGATGAAGTGCGAGAGTTCGAAAGAGCCACTCAGGAAGCCACCAACAAGAAGATTGGCGTTTTCCCACCGGCCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR CAA 90 bp | CGCTTTGAAGGTGGAATACAGAAGAACCCAAGGTGTCCTGTGTCTGCCCATGGTCCCGAACATCATCCATaGTCATATCGTACCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RFEGGIQKNPRCPVSAHGPEHHP*SYRTTH Trigger: ATGAGTGGTACGATATGACAATGGATGATGTTCGGG...ACCATGGGCAGACACAGGACACCTTGGGTTCTTCTGTATTCCACCTTCAAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | CCAAGAACACATCTGAGTGAAGGAGGCAGTCTTTTCCTCGTCCAGAGAATTCTTCTAGGCAGCTTGCTGTaGAGATACACTCGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRTHLSEGGSLFLVQRILLGSLL*RYTRFS Trigger: TGAGAAGCGAGTGTATCTCAACAGCAAGCTGCCTAG...AAGAATTCTCTGGACGAGGAAAAGACTGCCTCCTTCACTCAGATGTGTTCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGGGAGCACATGATGGGTaGATGGTTGTCTCGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKGAHDG*MVVSPA Trigger: GGCTGGCGAGACAACCATCAACCCATCATGTGCTCC...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTTGAAAGCCAGACATTCTCACTGAGTACAGCTGCATGGGGGAGGGAAATGTCTCGGACCACCTaGTGCACAAATTGTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FAFESQTFSLSTAAWGREMSRTT*CTNCST Trigger: AGTGGAACAATTTGTGCACAAGGTGGTCCGAGACAT...TTCCCTCCCCCATGCAGCTGTACTCAGTGAGAATGTCTGGCTTTCAAAAGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | AGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGTTCCGGGGCCGGTCTTaGGGAATGGACAGAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKIHASIPCKEGYPTMVLFRGRS*GMDRNS Trigger: AGAATTTCTGTCCATTCCCAAAGACCGGCCCCGGAA...CAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTTGAAAGCCAGACATTCTCACTGAGTACAGCTGCATGGGGGAGGGAATGCTCATGGCTGTGTTaGCTGATCATATACAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FAFESQTFSLSTAAWGRECSWLC*LIIYSC Trigger: ACAGCTGTATATGATCAGCAAACACAGCCATGAGCA...TTCCCTCCCCCATGCAGCTGTACTCAGTGAGAATGTCTGGCTTTCAAAAGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCCCGATATTTAGATTATAAGGAAGGCCTAAGAGAATGGTGGTGCTTCCTATTGTTGTCTTCATACTaGGTTTCTATGTGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPRYLDYKEGLREWWCFLLLSSY*VSMWME Trigger: CTCCATCCACATAGAAACCAAGTATGAAGACAACAA...TAGGAAGCACCACCATTCTCTTAGGCCTTCCTTATAATCTAAATATCGGGGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | AGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTACTATGGTACTGCTATCGTTGCTTCCCTaGTTGTCTTCATACTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKIHASIPCKEGYPTMVLLSLLP*LSSYLV Trigger: AACCAAGTATGAAGACAACAAGGGAAGCAACGATAG...CAGTACCATAGTAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAAAGTGAACCAGATTGTTGACCTTGACAATGGAAGCGGCTATAGAAAGATGTCTCGGACCACCTaGTGCACAAATTGTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLKVNQIVDLDNGSGYRKMSRTT*CTNCST Trigger: AGTGGAACAATTTGTGCACAAGGTGGTCCGAGACAT...CTTTCTATAGCCGCTTCCATTGTCAAGGTCAACAATCTGGTTCACTTTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS-3UTR CAA 90 bp | CTAATGAAATATATCCAGAATCCCACCCCTTCCCTATTTGTAACACAGGCAAACCTCGCACTTCATCCATaGTCATGTCGTACCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LMKYIQNPTPSLFVTQANLALHP*SCRTTH Trigger: ATGAGTGGTACGACATGACAATGGATGAAGTGCGAG...GTTTGCCTGTGTTACAAATAGGGAAGGGGTGGGATTCTGGATATATTTCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040380.13 |
||
| CDS CCA 90 bp | GGAGAATTTCGGCAGGAAGGAACAAGTGTATTCTGTGATGGTGTATaGGTAATAATTCCACGCCTTCTCGGTCACATAAAATATTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEFRQEGTSVFCDGV*VIIPRLLGHIKYFG Trigger: CCCAAAATATTTTATGTGACCGAGAAGGCGTGGAATTATTACCCATACACCATCACAGAATACACTTGTTCCTTCCTGCCGAAATTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTCCCACAAGCAAGATTCATGCTTCCATACCATGCAAAGAAGGGTACCCTATTGTTGTCTTCATACTaGGTTTCTATGTGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VFPQARFMLPYHAKKGTLLLSSY*VSMWME Trigger: CTCCATCCACATAGAAACCAAGTATGAAGACAACAA...TAGGGTACCCTTCTTTGCATGGTATGGAAGCATGAATCTTGCTTGTGGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 |
||
| CDS GCA 90 bp | TCTGTGCATGGCTCTCTATGTCATCCACAGTGGAGGAGTGCTGATTaGAAACTTTTATGTTGGTTTGTTCATGCATGTTTTTCTCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SVHGSLCHPQWRSAD*KLLCWFVHACFSRI Trigger: AATACGAGAAAAACATGCATGAACAAACCAACATAAAAGTTTGCAATCAGCACTCCTCCACTGTGGATGACATAGAGAGCCATGCACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS TCA 72 bp | TACACTCGCTTCTCAGTGAACTGCCCGTTGCCATGGTaGGGGTCCTCAAAGGGCTCGTTCTGCACGACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YTRFSVNCPLPW*GSSKGSFCTTS Trigger: AGAGGTCGTGCAGAACGAGCCCTTTGAGGACCCTCACCATGGCAACGGGCAGTTCACTGAGAAGCGAGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
||
| CDS GCA 72 bp | TTCTGCACGACCTCTACCCCTTCTCCCCGGTCACTCTaGTCATGGCTGTGTTTGCTGATCATATACAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCTTSTPSPRSL*SWLCLLIIYSC Trigger: ACAGCTGTATATGATCAGCAAACACAGCCATGAGCAGAGTGACCGGGGAGAAGGGGTAGAGGTCGTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
||
| CDS CCA 72 bp | ACGACCTCTACCCCTTCTCCCCGGTCACTCTGCTCATaGCTGTGTTTGCTGATCATATACAGCTGTCCGATT | + |
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Preference number: 6 (lower is better) Translates to: TTSTPSPRSLCS*LCLLIIYSCPI Trigger: AATCGGACAGCTGTATATGATCAGCAAACACAGCCATGAGCAGAGTGACCGGGGAGAAGGGGTAGAGGTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
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| CDS CAA 72 bp | AATCAGCAAGATGTCTCGGACCACCTTGTGCACAAATaGTTCCACTCGGGTCTGAAGGCCCCACACCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: NQQDVSDHLVHK*FHSGLKAPHLE Trigger: TTCGAGGTGTGGGGCCTTCAGACCCGAGTGGAACAATTTGTGCACAAGGTGGTCCGAGACATCTTGCTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS TCA 72 bp | CTTCTCCCCGGTCACTCTGCTCATGGCTGTGTTTGCTaGTCATATACAGCTGTCCGATTTTGTACTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LLPGHSAHGCVC*SYTAVRFCTRP Trigger: TGGACGAGTACAAAATCGGACAGCTGTATATGATCAGCAAACACAGCCATGAGCAGAGTGACCGGGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103064.10 |
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| CDS TCA 72 bp | TGGAGAATTTCGGCAGGAAGGAACAAGTGTATTCTGTaGTGGTGTATGGGTAATAATTCCACGCCTTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: WRISAGRNKCIL*WCMGNNSTPSR Trigger: CCGAGAAGGCGTGGAATTATTACCCATACACCATCACAGAATACACTTGTTCCTTCCTGCCGAAATTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS CAA 72 bp | GCGATATCGATGAAGCACACTTCTCTCTCGAGGTCTTaGGCTTCACTGTCAAAAATACTATCGTTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: AISMKHTSLSRS*ASLSKILSLLP Trigger: GGGAAGCAACGATAGTATTTTTGACAGTGAAGCCAAAGACCTCGAGAGAGAAGTGTGCTTCATCGATATCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS CAA 90 bp | TCATCACAGGCGATATCGATGAAGCACACTTCTCTCTCGAGGTCTTaGGCTTCACTGTCAAAAATACTATCGTTGCTTCCCTTGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSQAISMKHTSLSRS*ASLSKILSLLPLLS Trigger: AGACAACAAGGGAAGCAACGATAGTATTTTTGACAGTGAAGCCAAAGACCTCGAGAGAGAAGTGTGCTTCATCGATATCGCCTGTGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS CAA 90 bp | AGGTCTTTGGCTTCACTGTCAAAAATACTATCGTTGCTTCCCTTGTaGTCTTCATACTTGGTTTCTATGTGGATGGAGAATTTCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSLASLSKILSLLPL*SSYLVSMWMENFGR Trigger: CCTGCCGAAATTCTCCATCCACATAGAAACCAAGTATGAAGACAACAAGGGAAGCAACGATAGTATTTTTGACAGTGAAGCCAAAGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS CAA 90 bp | TCGAGGTCTTTGGCTTCACTGTCAAAAATACTATCGTTGCTTCCCTaGTTGTCTTCATACTTGGTTTCTATGTGGATGGAGAATTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: SRSLASLSKILSLLP*LSSYLVSMWMENFG Trigger: GCCGAAATTCTCCATCCACATAGAAACCAAGTATGAAGACAACAAGGGAAGCAACGATAGTATTTTTGACAGTGAAGCCAAAGACCTCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS CCA 72 bp | AAATACTATCGTTGCTTCCCTTGTTGTCTTCATACTTaGTTTCTATGTGGATGGAGAATTTCGGCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: KYYRCFPCCLHT*FLCGWRISAGR Trigger: CCTTCCTGCCGAAATTCTCCATCCACATAGAAACCAAGTATGAAGACAACAAGGGAAGCAACGATAGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS CAA 72 bp | TTGGCTTCACTGTCAAAAATACTATCGTTGCTTCCCTaGTTGTCTTCATACTTGGTTTCTATGTGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: LASLSKILSLLP*LSSYLVSMWME Trigger: CTCCATCCACATAGAAACCAAGTATGAAGACAACAAGGGAAGCAACGATAGTATTTTTGACAGTGAAGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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| CDS CAA 72 bp | TCGAGGTCTTTGGCTTCACTGTCAAAAATACTATCGTaGCTTCCCTTGTTGTCTTCATACTTGGTTTCTATG | + |
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Preference number: 6 (lower is better) Translates to: SRSLASLSKILS*LPLLSSYLVSM Trigger: CATAGAAACCAAGTATGAAGACAACAAGGGAAGCAACGATAGTATTTTTGACAGTGAAGCCAAAGACCTCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040380.13 ENSMUST00000103064.10 ENSMUST00000134763.2 |
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