Pregenerated sensors for PITPNB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050017Ensembl transcript IDs: ENSMUST00000086635.9, ENSMUST00000200298.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGCAACGCTCAGGTCTGGCTGGGCGTCAGGATGGCGACAGACCTaGGCCACACTCAAGCTGTTCCTAGCTCTTCATTTCCTCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: AATLRSGWASGWRQT*ATLKLFLALHFLLA Trigger: GGCCAGGAGGAAATGAAGAGCTAGGAACAGCTTGAGTGTGGCCCAGGTCTGTCGCCATCCTGACGCCCAGCCAGACCTGAGCGTTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 90 bp | AGCAATGAGGAGGAAGCAGAGTCGGCAGCAACGCTCAGGTCTGGCTaGGCGTCAGGATGGCGACAGACCTGGGCCACACTCAAGCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SNEEEAESAATLRSG*ASGWRQTWATLKLF Trigger: GAACAGCTTGAGTGTGGCCCAGGTCTGTCGCCATCCTGACGCCCAGCCAGACCTGAGCGTTGCTGCCGACTCTGCTTCCTCCTCATTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 90 bp | CTCGAATCGTCAGACACACACTGGAAACGTCCAACACTGAGACGCTaGTGGCTTCAGTCATCACAGGCCGCACTGGTCCCCCTCACTTGG | + |
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Preference number: 1 (lower is better) Translates to: LESSDTHWKRPTLRR*WLQSSQAALVPLTW Trigger: CCAAGTGAGGGGGACCAGTGCGGCCTGTGATGACTGAAGCCACCAGCGTCTCAGTGTTGGACGTTTCCAGTGTGTGTCTGACGATTCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
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| 3UTR CCA 90 bp | GTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTaGGGACGGTTGGGCTCTCCAGTGCCGGGGTTAGAACCCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: VPKLLRKHGCLSWFH*GRLGSPVPGLEPRV Trigger: AACCCTGGGTTCTAACCCCGGCACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 90 bp | GTTGCCTTTGTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTaGTTCCACTGGGGACGGTTGGGCTCTCCAGTGCCGGGGTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: VAFVPKLLRKHGCLS*FHWGRLGSPVPGLE Trigger: TTCTAACCCCGGCACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACAAAGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR TCA 90 bp | GGGTGCTGTGCTCTGGGTTGGGGGTTAAAAAGGCAGTGTGTAACCTaGAGGATTCAGCAGTGTGATTCTGGTCAGGGTCCCAGGGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: GCCALGWGLKRQCVT*RIQQCDSGQGPRAN Trigger: GTTAGCCCTGGGACCCTGACCAGAATCACACTGCTGAATCCTTCAGGTTACACACTGCCTTTTTAACCCCCAACCCAGAGCACAGCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 90 bp | AACACAGGAGTCCGTTGCCTTTGTGCCCAAGCTCCTAAGGAAACATaGATGTCTGAGTTGGTTCCACTGGGGACGGTTGGGCTCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: NTGVRCLCAQAPKET*MSELVPLGTVGLSS Trigger: ACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACAAAGGCAACGGACTCCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR GCA 90 bp | AAGCCATTTCAGAAACAAAACTCCACAGAAGTGCTCCACACAGCCTaGAATACCACTCAGGTTAATTGCTTGATCGCCGTTTGCTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: KPFQKQNSTEVLHTA*NTTQVNCLIAVCLA Trigger: GGCTAAGCAAACGGCGATCAAGCAATTAACCTGAGTGGTATTGCAGGCTGTGTGGAGCACTTCTGTGGAGTTTTGTTTCTGAAATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 90 bp | TTTCCGTTTCAGTTCCTTTGTTTTACTGTAATTTACACAGGAGACTaGCAAGTAAAGCAGGTGCTTTACGCTCATACACGTCCCTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: FPFQFLCFTVIYTGD*QVKQVLYAHTRPSV Trigger: GACTGAGGGACGTGTATGAGCGTAAAGCACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAACAAAGGAACTGAAACGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR TCA 90 bp | ACCACTCAGGTTAATTGCTTGATCGCCGTTTGCTTAGCCAGAGTCTaGATATTGTCTAGTGTTTATTATAAATCACAAACCGTCATCACT | + |
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Preference number: 1 (lower is better) Translates to: TTQVNCLIAVCLARV*ILSSVYYKSQTVIT Trigger: AGTGATGACGGTTTGTGATTTATAATAAACACTAGACAATATTCAGACTCTGGCTAAGCAAACGGCGATCAAGCAATTAACCTGAGTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGAGGGGACATGAAGGCCAAGTCTGCCAACAAAGGGGTCACTCGGGTGCTGGCTGGGCGTCAGGATaGCGACAGACCTGGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: GRRGHEGQVCQQRGHSGAGWASG*RQTWAT Trigger: TGTGGCCCAGGTCTGTCGCCATCCTGACGCCCAGCC...AGCACCCGAGTGACCCCTTTGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGAGGGGACATGAAGGCCAAGTCTGCCAACAAAGGGGTCACTCGGGTGCTCATCACAGGCCGCACTaGTCCCCCTCACTTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GRRGHEGQVCQQRGHSGAHHRPH*SPSLGL Trigger: AAGGCCAAGTGAGGGGGACCAGTGCGGCCTGTGATG...AGCACCCGAGTGACCCCTTTGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAACAAAGGGGTCACTCGGGTGCTCTGATGGCAGGGTGCTGTGCTCTGGGGAAGAGGAGGAGCAATaGGGAGGAAGCAGAGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LPTKGSLGCSDGRVLCSGEEEEQ*GGSRVG Trigger: GCCGACTCTGCTTCCTCCTCATTGCTCCTCCTCTTC...CCCAGAGCACAGCACCCTGCCATCAGAGCACCCGAGTGACCCCTTTGTTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGTGCGATGCAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCAAAGGATTCAGCAGTGTaGTTCTGGTCAGGGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GQCDAVGISAIAPMGHRAKDSAV*FWSGSQ Trigger: CTGGGACCCTGACCAGAATCACACTGCTGAATCCTT...TGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATCGCACTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACCGTCCGTCCGTGTGTGTaGACACGTGTGCTCGAATCG | + |
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Preference number: 2 (lower is better) Translates to: PPGLDHNRKRAGRDHSPTVRPCV*TRVLES Trigger: CGATTCGAGCACACGTGTGCACACACACGGACGGAC...GGTGGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCAGGGCGGAGGGGACGTGCTCCACACAGCCTaGAATACCACTCAGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: QWESLPLLPWDTGQGGGDVLHTA*NTTQVN Trigger: ATTAACCTGAGTGGTATTGCAGGCTGTGTGGAGCAC...GTCCCCTCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGGAGCAATGAGGAGGAAGCAGAGTCGGCAGCAACGCTCAGGTCTGGCTACACTGAGACGCTGGTaGCTTCAGTCATCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RGGAMRRKQSRQQRSGLATLRRW*LQSSQA Trigger: GGCCTGTGATGACTGAAGCCACCAGCGTCTCAGTGT...AGCCAGACCTGAGCGTTGCTGCCGACTCTGCTTCCTCCTCATTGCTCCTCCTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCAGGGCGGAGGATAGGCTGTACACACTaGTCCACACCTGGCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: DAVGISAIAPMGHRAGRRIGCTH*STPGIH Trigger: GTGAATGCCAGGTGTGGACCAGTGTGTACAGCCTAT...CCTCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTGGGGACGAGGGCGGAGGGGACATaGAGGCCAAGTCTGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: CAQAPKETWMSELVPLGTRAEGT*RPSLPT Trigger: TGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCCT...CGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGTGCGATGCAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCATGCTGTGCTCTGGGTTaGGGGTTAAAAAGGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GQCDAVGISAIAPMGHRACCALG*GLKRQC Trigger: ACACTGCCTTTTTAACCCCCAACCCAGAGCACAGCA...TGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATCGCACTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGAGGGGACATGAAGGCCAAGTCTGCCAACAAAGGGGTCACTCGGGTGCTATCCTACCCAGCTACTaGTCCTTTCTCTTACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GRRGHEGQVCQQRGHSGAILPSY*SFLLQE Trigger: TTCCTGTAAGAGAAAGGAGCAGTAGCTGGGTAGGAT...AGCACCCGAGTGACCCCTTTGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAGGAGGAGCAATGAGGAGGAAGCAGAGTCGGCAGCAACGCTCAGGTCTTCCCACCCTGTGAGCTaGGAACAATACAGACTATCC | + |
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Preference number: 2 (lower is better) Translates to: RKRRSNEEEAESAATLRSSHPVS*EQYRLS Trigger: GGATAGTCTGTATTGTTCTCAGCTCACAGGGTGGGA...AGACCTGAGCGTTGCTGCCGACTCTGCTTCCTCCTCATTGCTCCTCCTCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTACACACTGGTCCACACCTGGCATTCACGAAGCACGCCAGCCAGCACCAACACGCATAAGTGTGTaGGAATATGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GCTHWSTPGIHEARQPAPTRISV*EYVCVC Trigger: ACACACACACACATATTCTCACACACTTATGCGTGT...TGGTGCTGGCTGGCGTGCTTCGTGAATGCCAGGTGTGGACCAGTGTGTACAGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTGGGGACGAAGGATTCAGCAGTGTaGTTCTGGTCAGGGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: CAQAPKETWMSELVPLGTKDSAV*FWSGSQ Trigger: CTGGGACCCTGACCAGAATCACACTGCTGAATCCTT...CGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTGGGGACGTCCCACCCTGTGAGCTaGGAACAATACAGACTATCC | + |
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Preference number: 2 (lower is better) Translates to: CAQAPKETWMSELVPLGTSHPVS*EQYRLS Trigger: GGATAGTCTGTATTGTTCTCAGCTCACAGGGTGGGA...CGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAAAGCCATTTCAGAAACAAAACTCCACAGAAGTGCTCCACACAGCCTGCGTCCGTCCGTGTGTGTaGACACGTGTGCTCGAATCG | + |
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Preference number: 2 (lower is better) Translates to: PEKPFQKQNSTEVLHTACVRPCV*TRVLES Trigger: CGATTCGAGCACACGTGTGCACACACACGGACGGAC...GCAGGCTGTGTGGAGCACTTCTGTGGAGTTTTGTTTCTGAAATGGCTTTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTACACACTGGTCCACACCTGGCATTCACGAAGCACGCCAGCCAGCACCAACCTGTAGCCATATGTaGTTTACATACAGCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: GCTHWSTPGIHEARQPAPTCSHM*FTYSYR Trigger: TCTGTAGCTGTATGTAAAGCACATATGGCTACAGGT...TGGTGCTGGCTGGCGTGCTTCGTGAATGCCAGGTGTGGACCAGTGTGTACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGCTTTACGCTCAGTCACTCGGGTGCTCTaGTGGCAGGGTGCTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: FYCNLHRRLASKAGALRSVTRVL*WQGAVL Trigger: GAGCACAGCACCCTGCCATCAGAGCACCCGAGTGAC...TGAGCGTAAAGCACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGGCAAGTAAAGCAGGTGCTTTACGCTCATACACGTCCCTCAGTCTCCACACATTTCCTCCTGGCCTaGACCACAACAGAAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: DWQVKQVLYAHTRPSVSTHFLLA*TTTEKE Trigger: CTCTTTTTCTGTTGTGGTCCAGGCCAGGAGGAAATG...TGTGGAGACTGAGGGACGTGTATGAGCGTAAAGCACCTGCTTTACTTGCCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGGCAAGTAAAGCAGGTGCTTTACGCTCATACACGTCCCTCAGTCTCCACACTCTTCATTTCCTCCTaGCCTGGACCACAACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: DWQVKQVLYAHTRPSVSTLFISS*PGPQQK Trigger: TTTCTGTTGTGGTCCAGGCCAGGAGGAAATGAAGAG...TGTGGAGACTGAGGGACGTGTATGAGCGTAAAGCACCTGCTTTACTTGCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCCTTTGTTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGCTGCCATTGCTCCCATaGGACACAGGGCAGGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: QFLCFTVIYTGDWQVKQVLPLLP*DTGQGG Trigger: TCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAG...CACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAACAAAGGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACACGCATAAGTGTGTaGGAATATGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: FPPGLDHNRKRAGRDHSPTRISV*EYVCVC Trigger: ACACACACACACATATTCTCACACACTTATGCGTGT...GGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGGAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCCTTTGTTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGGAAGAGGAGGAGCAATaGGGAGGAAGCAGAGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: QFLCFTVIYTGDWQVKQVEEEEQ*GGSRVG Trigger: GCCGACTCTGCTTCCTCCTCATTGCTCCTCCTCTTC...CACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAACAAAGGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGCTTTACGCTCAGGGAATCTCTGCCATTaGTCCCATGGGACACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: FYCNLHRRLASKAGALRSGNLCH*SHGTQG Trigger: GCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCC...TGAGCGTAAAGCACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGTCAGGGTCCCAGGGCTAACAAGAGGAAACAGCATCAGACAGAAAGGTCATGCTTAGCCAGAGTCTaGATATTGTCTAGTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: SGQGPRANKRKQHQTERSCLARV*ILSSVY Trigger: ATAAACACTAGACAATATTCAGACTCTGGCTAAGCA...TGACCTTTCTGTCTGATGCTGTTTCCTCTTGTTAGCCCTGGGACCCTGACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 72 bp | GAGGAAGCAGAGTCGGCAGCAACGCTCAGGTCTGGCTaGGCGTCAGGATGGCGACAGACCTGGGCCACACTC | + |
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Preference number: 3 (lower is better) Translates to: EEAESAATLRSG*ASGWRQTWATL Trigger: GAGTGTGGCCCAGGTCTGTCGCCATCCTGACGCCCAGCCAGACCTGAGCGTTGCTGCCGACTCTGCTTCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR TCA 72 bp | TGCTCCCATGGGACACAGGGCAGGGCGGAGGGGACATaGAGGCCAAGTCTGCCAACAAAGGGGTCACTCGGG | + |
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Preference number: 3 (lower is better) Translates to: CSHGTQGRAEGT*RPSLPTKGSLG Trigger: CCCGAGTGACCCCTTTGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCCTGCCCTGTGTCCCATGGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR GCA 72 bp | AACCGGGCAGTGCGATGCAGTGGGAATCTCTGCCATTaGTCCCATGGGACACAGGGCAGGGCGGAGGGGACA | + |
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Preference number: 3 (lower is better) Translates to: NRAVRCSGNLCH*SHGTQGRAEGT Trigger: TGTCCCCTCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATCGCACTGCCCGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR GCA 72 bp | GAGGGTAACCGGGCAGTGCGATGCAGTGGGAATCTCTaGCATTGCTCCCATGGGACACAGGGCAGGGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: EGNRAVRCSGNL*HCSHGTQGRAE Trigger: CTCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATCGCACTGCCCGGTTACCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 72 bp | TCGGCAGCAACGCTCAGGTCTGGCTGGGCGTCAGGATaGCGACAGACCTGGGCCACACTCAAGCTGTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: SAATLRSGWASG*RQTWATLKLFL Trigger: TAGGAACAGCTTGAGTGTGGCCCAGGTCTGTCGCCATCCTGACGCCCAGCCAGACCTGAGCGTTGCTGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR GCA 72 bp | CCAGGGTTTGCTGCTGAGGGTAACCGGGCAGTGCGATaGAGTGGGAATCTCTGCCATTGCTCCCATGGGACA | + |
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Preference number: 3 (lower is better) Translates to: PGFAAEGNRAVR*SGNLCHCSHGT Trigger: TGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATCGCACTGCCCGGTTACCCTCAGCAGCAAACCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 72 bp | GACACACACTGGAAACGTCCAACACTGAGACGCTGGTaGCTTCAGTCATCACAGGCCGCACTGGTCCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: DTHWKRPTLRRW*LQSSQAALVPL Trigger: GAGGGGGACCAGTGCGGCCTGTGATGACTGAAGCCACCAGCGTCTCAGTGTTGGACGTTTCCAGTGTGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
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| 3UTR CCA 72 bp | CTCAGGTCTGGCTGGGCGTCAGGATGGCGACAGACCTaGGCCACACTCAAGCTGTTCCTAGCTCTTCATTTC | + |
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Preference number: 3 (lower is better) Translates to: LRSGWASGWRQT*ATLKLFLALHF Trigger: GAAATGAAGAGCTAGGAACAGCTTGAGTGTGGCCCAGGTCTGTCGCCATCCTGACGCCCAGCCAGACCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 72 bp | GTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTaGTTCCACTGGGGACGGTTGGGCTCTCCAGTGCCG | + |
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Preference number: 3 (lower is better) Translates to: VPKLLRKHGCLS*FHWGRLGSPVP Trigger: CGGCACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR CCA 72 bp | CTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTaGGGACGGTTGGGCTCTCCAGTGCCGGGGTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLRKHGCLSWFH*GRLGSPVPGLE Trigger: TTCTAACCCCGGCACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| 3UTR TCA 72 bp | TCATCACAGGCCGCACTGGTCCCCCTCACTTGGCCTTaGCTCCGTAGACAGTCTGATAATGTCTCTGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: SSQAALVPLTWP*LRRQSDNVSDL Trigger: TAGGTCAGAGACATTATCAGACTGTCTACGGAGTCAAGGCCAAGTGAGGGGGACCAGTGCGGCCTGTGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCAGGGCGGAGGGGACGCTTTGACTCCTTACTaGACAGATAATGTTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: QWESLPLLPWDTGQGGGDALTPY*TDNVGF Trigger: AAATCCAACATTATCTGTCAAGTAAGGAGTCAAAGC...GTCCCCTCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR TCA 72 bp | GCTCTGGGTTGGGGGTTAAAAAGGCAGTGTGTAACCTaGAGGATTCAGCAGTGTGATTCTGGTCAGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ALGWGLKRQCVT*RIQQCDSGQGP Trigger: GGGACCCTGACCAGAATCACACTGCTGAATCCTTCAGGTTACACACTGCCTTTTTAACCCCCAACCCAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTGGCAAGTAAAGCAGGTGCTTTACGCTCATACACGTCCCTCAGTCTCCACAACTCAGGTTAATTGCTaGATCGCCGTTTGCTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DWQVKQVLYAHTRPSVSTTQVNC*IAVCLA Trigger: GGCTAAGCAAACGGCGATCAAGCAATTAACCTGAGT...TGTGGAGACTGAGGGACGTGTATGAGCGTAAAGCACCTGCTTTACTTGCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR TCA 72 bp | AGAAAAAGAGCTGGACGTGATCACTCTCCCACCCTGTaGGCTGAGAACAATACAGACTATCCACAAAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RKRAGRDHSPTL*AENNTDYPQSL Trigger: GAGACTTTGTGGATAGTCTGTATTGTTCTCAGCTCACAGGGTGGGAGAGTGATCACGTCCAGCTCTTTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACCCTGTGAGCTGAGAGCTTTGACTCCTTACTaGACAGATAATGTTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: TTTEKELDVITLPPCELRALTPY*TDNVGF Trigger: AAATCCAACATTATCTGTCAAGTAAGGAGTCAAAGC...TCTCAGCTCACAGGGTGGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGCTTTACGCTCAACATGGATGTCTGAGTaGGTTCCACTGGGGACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FYCNLHRRLASKAGALRSTWMSE*VPLGTV Trigger: AACCGTCCCCAGTGGAACCAACTCAGACATCCATGT...TGAGCGTAAAGCACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR GCA 72 bp | GTTGAAGGCAGGTGCAGTACTTTGGAGAAAACGCCCTaGTCCCTTCGATCTTTACATGTACATACATATATA | + |
|
Preference number: 3 (lower is better) Translates to: VEGRCSTLEKTP*SLRSLHVHTYI Trigger: TATATATGTATGTACATGTAAAGATCGAAGGGAGCAGGGCGTTTTCTCCAAAGTACTGCACCTGCCTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR GCA 72 bp | CAGAAAAGCCATTTCAGAAACAAAACTCCACAGAAGTaGTCCACACAGCCTGCAATACCACTCAGGTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: QKSHFRNKTPQK*STQPAIPLRLI Trigger: AATTAACCTGAGTGGTATTGCAGGCTGTGTGGAGCACTTCTGTGGAGTTTTGTTTCTGAAATGGCTTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR CCA 72 bp | CAGTTCCTTTGTTTTACTGTAATTTACACAGGAGACTaGCAAGTAAAGCAGGTGCTTTACGCTCATACACGT | + |
|
Preference number: 3 (lower is better) Translates to: QFLCFTVIYTGD*QVKQVLYAHTR Trigger: ACGTGTATGAGCGTAAAGCACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAACAAAGGAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR TCA 72 bp | GTTTACATTCCAGAGTCACTGGAGTATCTAAAAATTTaGAGAAATCTTTCTGTAGGAGTTGTTGCTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: VYIPESLEYLKI*RNLSVGVVADG Trigger: TCCATCAGCAACAACTCCTACAGAAAGATTTCTTCAAATTTTTAGATACTCCAGTGACTCTGGAATGTAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | CACGCCAGCCAGCACCACGGGGCACCACAGGGCAGTCCGTTTGTCCATCAAGGGCATCAGCAGCCGACGTaGCTCGGACGGAACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HASQHHGAPQGSPFVHQGHQQPT*LGRNPS Trigger: AGAAGGGTTCCGTCCGAGGCACGTCGGCTGCTGATG...CCCTTGATGGACAAACGGACTGCCCTGTGGTGCCCCGTGGTGCTGGCTGGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCAACAAAGGGGTCACTCGGGTGCTCTGATGGCAGGGTGCTGTGCTCTGGGTTCCAGGCTTTCTCATaGAACACCAGGGAGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPTKGSLGCSDGRVLCSGFQAFS*NTREPS Trigger: CGAGGGCTCCCTGGTGTTTCATGAGAAAGCCTGGAA...CCCAGAGCACAGCACCCTGCCATCAGAGCACCCGAGTGACCCCTTTGTTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTGGGGACGGTTGGGCTCCATCACAGGCCGCACTaGTCCCCCTCACTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: APKETWMSELVPLGTVGLHHRPH*SPSLGL Trigger: AAGGCCAAGTGAGGGGGACCAGTGCGGCCTGTGATG...GAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | CACGCCAGCCAGCACCACGGGGCACCACAGGGCAGTCCGTTTGTCCATCAAGGGATTCTTACTCGCTTCTaGAACAGAGTAAAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HASQHHGAPQGSPFVHQGILTRF*NRVKLS Trigger: GGACAGCTTTACTCTGTTGCAGAAGCGAGTAAGAAT...CCCTTGATGGACAAACGGACTGCCCTGTGGTGCCCCGTGGTGCTGGCTGGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR CAA 72 bp | AAACATGGATGTCTGAGTTGGTTCCACTGGGGACGGTaGGGCTCTCCAGTGCCGGGGTTAGAACCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHGCLSWFHWGR*GSPVPGLEPRV Trigger: AACCCTGGGTTCTAACCCCGGCACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR CAA 72 bp | TGTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTaGGTTCCACTGGGGACGGTTGGGCTCTCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CAQAPKETWMSE*VPLGTVGLSSA Trigger: GGCACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | CGCCAGCCAGCACCACGGGGCACCACAGGGCAGTCCGTTTGTCCATCAAGGGCATTGGTCTTGACTGAATaGAATAATGCAGGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQPAPRGTTGQSVCPSRALVLTE*NNAGSS Trigger: TGAAGACCCTGCATTATTCCATTCAGTCAAGACCAA...TGCCCTTGATGGACAAACGGACTGCCCTGTGGTGCCCCGTGGTGCTGGCTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | GATGCAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCAGGGCGGAGGATCAGCTTTGTAGTCTaGTGGTTCAACTTGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DAVGISAIAPMGHRAGRRISFVV*WFNLTS Trigger: CGAAGTCAAGTTGAACCAGCAGACTACAAAGCTGAT...CCTCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | CACGCCAGCCAGCACCACGGGGCACCACAGGGCAGTCCGTTTGTCCATCAAGGGATCCAACAAAAGAGCTaGCGATGTAAGTTCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HASQHHGAPQGSPFVHQGIQQKS*RCKFVN Trigger: ATTTACGAACTTACATCGCCAGCTCTTTTGTTGGAT...CCCTTGATGGACAAACGGACTGCCCTGTGGTGCCCCGTGGTGCTGGCTGGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACCCTGTGAGCTGAGATTCCAGGCTTTCTCATaGAACACCAGGGAGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TTTEKELDVITLPPCELRFQAFS*NTREPS Trigger: CGAGGGCTCCCTGGTGTTTCATGAGAAAGCCTGGAA...TCTCAGCTCACAGGGTGGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | GGGCGGAGGGGACATGAAGGCCAAGTCTGCCAACAAAGGGGTCACTCGGGTGCTAATCATCCTCACAAATaGAGGAACTTTGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRRGHEGQVCQQRGHSGANHPHK*RNFALQ Trigger: CTGAAGAGCAAAGTTCCTGCATTTGTGAGGATGATT...AGCACCCGAGTGACCCCTTTGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCTGGGCGTCAGGATGGCGACAGACCTGGGCCACACTCAAGCTGTTCCTCAGTTTTCCAAGTGTTaGGATCTAAACCGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VWLGVRMATDLGHTQAVPQFSKC*DLNREH Trigger: ATGTTCACGGTTTAGATCCCAACACTTGGAAAACTG...AGGAACAGCTTGAGTGTGGCCCAGGTCTGTCGCCATCCTGACGCCCAGCCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| 3UTR CAA 72 bp | CCAGCCAGCACCACGGGGCACCACAGGGCAGTCCGTTaGTCCATCAAGGGCATCATGTTGATGATTATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PASTTGHHRAVR*SIKGIMLMIIN Trigger: ATTAATAATCATCAACATGATGCCCTTGATGGACAAACGGACTGCCCTGTGGTGCCCCGTGGTGCTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACCGTCCTCTCTTGGTCTTaGCTGAATGGAATAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPGLDHNRKRAGRDHSPTVLSWS*LNGIMQ Trigger: CTGCATTATTCCATTCAGTCAAGACCAAGAGAGGAC...GGTGGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACCATTCTTACTCGCTTCTaGAACAGAGTAAAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLDHNRKRAGRDHSPTILTRF*NRVKLS Trigger: GGACAGCTTTACTCTGTTGCAGAAGCGAGTAAGAAT...GGTGGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGGAGCAATGAGGAGGAAGCAGAGTCGGCAGCAACGCTCAGGTCTGGCTAATCATCCTCACAAATaGAGGAACTTTGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGGAMRRKQSRQQRSGLANHPHK*RNFALQ Trigger: CTGAAGAGCAAAGTTCCTGCATTTGTGAGGATGATT...AGCCAGACCTGAGCGTTGCTGCCGACTCTGCTTCCTCCTCATTGCTCCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTCTGATGGCAGGGTGCTGTGCTCTGGGTTGGGGGTTAAAAAGGCAGTGCCCAAGTCAGGTTTATaGCATGTTTCAATTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GCSDGRVLCSGLGVKKAVPKSGL*HVSILM Trigger: CATCAAAATTGAAACATGGCATAAACCTGACTTGGG...CACTGCCTTTTTAACCCCCAACCCAGAGCACAGCACCCTGCCATCAGAGCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACCCTGTTGGTCTTGACTGAATaGAATAATGCAGGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLDHNRKRAGRDHSPTLLVLTE*NNAGSS Trigger: TGAAGACCCTGCATTATTCCATTCAGTCAAGACCAA...CAGGGTGGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTCTGATGGCAGGGTGCTGTGCTCTGGGTTGGGGGTTAAAAAGGCAGTGATCCAACAAAAGAGCTaGCGATGTAAGTTCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GCSDGRVLCSGLGVKKAVIQQKS*RCKFVN Trigger: ATTTACGAACTTACATCGCCAGCTCTTTTGTTGGAT...CACTGCCTTTTTAACCCCCAACCCAGAGCACAGCACCCTGCCATCAGAGCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCAGGGTCCCAGGGCTAACAAGAGGAAACAGCATCAGACAGAAAGGTCAGTCCTCTCTTGGTCTTaGCTGAATGGAATAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGQGPRANKRKQHQTERSVLSWS*LNGIMQ Trigger: CTGCATTATTCCATTCAGTCAAGACCAAGAGAGGAC...TGACCTTTCTGTCTGATGCTGTTTCCTCTTGTTAGCCCTGGGACCCTGACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAAACATGGATGTCTGAGTTGGTTCCACTGGGGACGGTTGGGCTCTCCAGTTTGGGATCTAAACCGTaGACATTTTCTAATGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KETWMSELVPLGTVGLSSLGSKP*TFSNVP Trigger: GGGAACATTAGAAAATGTTCACGGTTTAGATCCCAA...ACTGGAGAGCCCAACCGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCCAGTTTTCCAAGTGTTaGGATCTAAACCGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPGLDHNRKRAGRDHSPQFSKC*DLNREH Trigger: ATGTTCACGGTTTAGATCCCAACACTTGGAAAACTG...GGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGGAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | GACTGGCAAGTAAAGCAGGTGCTTTACGCTCATACACGTCCCTCAGTCTCCACAAGCTTTGTAGTCTGCTaGTTCAACTTGACTTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: DWQVKQVLYAHTRPSVSTSFVVC*FNLTSI Trigger: GATCGAAGTCAAGTTGAACCAGCAGACTACAAAGCT...TGTGGAGACTGAGGGACGTGTATGAGCGTAAAGCACCTGCTTTACTTGCCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | TCACTCGGGTGCTCTGATGGCAGGGTGCTGTGCTCTGGGTTGGGGGTTAAAAAGCGTTTTTCTTGCTTCTaGATAAAGTTCTCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGCSDGRVLCSGLGVKKRFSCF*IKFSTL Trigger: CAAAGTAGAGAACTTTATCCAGAAGCAAGAAAAACG...CTTTTTAACCCCCAACCCAGAGCACAGCACCCTGCCATCAGAGCACCCGAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAAAGCCATTTCAGAAACAAAACTCCACAGAAGTGCTCCACACAGCCTGCTCTGCTGGTTCAACTTaGCTTCGATCTGCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEKPFQKQNSTEVLHTACSAGST*LRSAMS Trigger: AGACATTGCAGATCGAAGTCAAGTTGAACCAGCAGA...GCAGGCTGTGTGGAGCACTTCTGTGGAGTTTTGTTTCTGAAATGGCTTTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTGGGGACGAACTTGACTTCGATCTaGAATGTCTATGTGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CAQAPKETWMSELVPLGTNLTSI*NVYVDN Trigger: ATTGTCCACATAGACATTGCAGATCGAAGTCAAGTT...CGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCAACTTGACTTCGATCTaGAATGTCTATGTGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPGLDHNRKRAGRDHSPNLTSI*NVYVDN Trigger: ATTGTCCACATAGACATTGCAGATCGAAGTCAAGTT...GGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGGAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | TCCGTGTGTGTGCACACGTGTGCTCGAATCGTCAGACACACACTGGAAACGTCCCGTTTTTCTTGCTTCTaGATAAAGTTCTCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVCVHTCARIVRHTLETSRFSCF*IKFSTL Trigger: CAAAGTAGAGAACTTTATCCAGAAGCAAGAAAAACG...GGACGTTTCCAGTGTGTGTCTGACGATTCGAGCACACGTGTGCACACACACGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCAAGCTCCTAAGGAAACATGGATGTCTGAGTTGGTTCCACTGGGGACGTCTGCAATGTCTATGTaGACAATTTCAACAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CAQAPKETWMSELVPLGTSAMSM*TISTVF Trigger: GAAAACTGTTGAAATTGTCCACATAGACATTGCAGA...CGTCCCCAGTGGAACCAACTCAGACATCCATGTTTCCTTAGGAGCTTGGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR TCA 90 bp | TTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGCTTTACGCTCAGTTTCTAGTTCTTTCTaGGTCTCATCCTCCATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FYCNLHRRLASKAGALRSVSSSF*VSSSIR Trigger: GCGAATGGAGGATGAGACTCAGAAAGAACTAGAAAC...TGAGCGTAAAGCACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTCCTTTGTTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGATCAGCTTTGTAGTCTaGTGGTTCAACTTGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QFLCFTVIYTGDWQVKQVISFVV*WFNLTS Trigger: CGAAGTCAAGTTGAACCAGCAGACTACAAAGCTGAT...CACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAACAAAGGAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR TCA 90 bp | CGTTTGTCCATCAAGGGCATCATGTTGATGATTATTAATATCTGTTCCAGGTATTTGGGATCTAAACCGTaGACATTTTCTAATGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSIKGIMLMIINICSRYLGSKP*TFSNVP Trigger: GGGAACATTAGAAAATGTTCACGGTTTAGATCCCAA...ATACCTGGAACAGATATTAATAATCATCAACATGATGCCCTTGATGGACAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CCA 90 bp | ATATATACACTCATGTGTGTATCTAGACCTGTAGCCATATGTGCTTTACATACATCTGCAATGTCTATGTaGACAATTTCAACAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYTLMCVSRPVAICALHTSAMSM*TISTVF Trigger: GAAAACTGTTGAAATTGTCCACATAGACATTGCAGA...TGTATGTAAAGCACATATGGCTACAGGTCTAGATACACACATGAGTGTATATAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGTACACACTGGTCCACACCTGGCATTCACGAAGCACGCCAGCCAGCACCAGACAGTCAGGGGTGTTaGCCAGCTCCTTCTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GCTHWSTPGIHEARQPAPDSQGC*PAPSSS Trigger: ACTGGAAGAAGGAGCTGGCAAACACCCCTGACTGTC...TGGTGCTGGCTGGCGTGCTTCGTGAATGCCAGGTGTGGACCAGTGTGTACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | GATGCAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCAGGGCGGAGGATAAAGTTCTCTACTTaGCTCTGCAGCCCCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: DAVGISAIAPMGHRAGRRIKFST*LCSPHH Trigger: GTGGTGGGGGCTGCAGAGCAAAGTAGAGAACTTTAT...CCTCCGCCCTGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTGGCCTGGACCACAACAGAAAAAGAGCTGGACGTGATCACTCTCCCACCCCCAGGGGTCCTCTCTaGGTCTTGACTGAATGGAAT | + |
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Preference number: 5 (lower is better) Translates to: PPGLDHNRKRAGRDHSPTPRGPL*VLTEWN Trigger: ATTCCATTCAGTCAAGACCAAGAGAGGACCCCTGGG...GGTGGGAGAGTGATCACGTCCAGCTCTTTTTCTGTTGTGGTCCAGGCCAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | CCGTGTGTGTGCACACGTGTGCTCGAATCGTCAGACACACACTGGAAACGTCCAGACAGTCAGGGGTGTTaGCCAGCTCCTTCTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: PCVCTRVLESSDTHWKRPDSQGC*PAPSSS Trigger: ACTGGAAGAAGGAGCTGGCAAACACCCCTGACTGTC...TGGACGTTTCCAGTGTGTGTCTGACGATTCGAGCACACGTGTGCACACACACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGCGGAGGGGACATGAAGGCCAAGTCTGCCAACAAAGGGGTCACTCGGGTGTCAGGTCAATCCACTaGTCAATCCAACAAAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: AGRRGHEGQVCQQRGHSGVRSIH*SIQQKS Trigger: GCTCTTTTGTTGGATTGACAAGTGGATTGACCTGAC...ACCCGAGTGACCCCTTTGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | GGGCGGAGGGGACATGAAGGCCAAGTCTGCCAACAAAGGGGTCACTCGGGTGCTGTCAGGTCAATCCACTaGTCAATCCAACAAAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: GRRGHEGQVCQQRGHSGAVRSIH*SIQQKS Trigger: GCTCTTTTGTTGGATTGACAAGTGGATTGACCTGAC...AGCACCCGAGTGACCCCTTTGTTGGCAGACTTGGCCTTCATGTCCCCTCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGTGCGATGCAGTGGGAATCTCTGCCATTGCTCCCATGGGACACAGGGCAGGTCCTCTCTTGGTCTaGACTGAATGGAATAATGCA | + |
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Preference number: 5 (lower is better) Translates to: GQCDAVGISAIAPMGHRAGPLLV*TEWNNA Trigger: TGCATTATTCCATTCAGTCAAGACCAAGAGAGGACC...TGCCCTGTGTCCCATGGGAGCAATGGCAGAGATTCCCACTGCATCGCACTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGAGGAGGAGCAATGAGGAGGAAGCAGAGTCGGCAGCAACGCTCAGGTCTATAAAGTTCTCTACTTaGCTCTGCAGCCCCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: RKRRSNEEEAESAATLRSIKFST*LCSPHH Trigger: GTGGTGGGGGCTGCAGAGCAAAGTAGAGAACTTTAT...AGACCTGAGCGTTGCTGCCGACTCTGCTTCCTCCTCATTGCTCCTCCTCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAGGAGCAATGAGGAGGAAGCAGAGTCGGCAGCAACGCTCAGGTCTGGCTGGTCCTCTCTTGGTCTaGACTGAATGGAATAATGCA | + |
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Preference number: 5 (lower is better) Translates to: RGGAMRRKQSRQQRSGLAGPLLV*TEWNNA Trigger: TGCATTATTCCATTCAGTCAAGACCAAGAGAGGACC...AGCCAGACCTGAGCGTTGCTGCCGACTCTGCTTCCTCCTCATTGCTCCTCCTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | TCCGTGTGTGTGCACACGTGTGCTCGAATCGTCAGACACACACTGGAAACGTCCGTCTGCTGGTTCAACTaGACTTCGATCTGCAATGTC | + |
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Preference number: 5 (lower is better) Translates to: SVCVHTCARIVRHTLETSVCWFN*TSICNV Trigger: GACATTGCAGATCGAAGTCAAGTTGAACCAGCAGAC...GGACGTTTCCAGTGTGTGTCTGACGATTCGAGCACACGTGTGCACACACACGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS TCA 90 bp | GTGCCTCGGACGGAACCCTTCTTACGCATTGTTTCTAGTTCTTTCTaGGTCTCATCCTCCATTCGCCTAATGTCTTCCATTGTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VPRTEPFLRIVSSSF*VSSSIRLMSSIVRS Trigger: TGACCTGACAATGGAAGACATTAGGCGAATGGAGGATGAGACTCAGAAAGAACTAGAAACAATGCGTAAGAAGGGTTCCGTCCGAGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
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| CDS-3UTR CAA 90 bp | TCTGGTCAGGGTCCCAGGGCTAACAAGAGGAAACAGCATCAGACAGAAAGGTCAAACCCTTCTTACGCATaGTTTCTAGTTCTTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SGQGPRANKRKQHQTERSNPSYA*FLVLSE Trigger: CTCAGAAAGAACTAGAAACAATGCGTAAGAAGGGTT...TGACCTTTCTGTCTGATGCTGTTTCCTCTTGTTAGCCCTGGGACCCTGACCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
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| CDS GCA 90 bp | GACTTCGATTCCTTCTCCACCACCAGTTTCATTCTTACTCGCTTCTaGAACAGAGTAAAGCTGTCCAACCTGATACTCTTGAACAGAACA | + |
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Preference number: 5 (lower is better) Translates to: DFDSFSTTSFILTRF*NRVKLSNLILLNRT Trigger: TGTTCTGTTCAAGAGTATCAGGTTGGACAGCTTTACTCTGTTGCAGAAGCGAGTAAGAATGAAACTGGTGGTGGAGAAGGAATCGAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS-3UTR CAA 90 bp | TTTTACTGTAATTTACACAGGAGACTGGCAAGTAAAGCAGGTGCTTTACGCTCAGTCTGCTGGTTCAACTaGACTTCGATCTGCAATGTC | + |
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Preference number: 5 (lower is better) Translates to: FYCNLHRRLASKAGALRSVCWFN*TSICNV Trigger: GACATTGCAGATCGAAGTCAAGTTGAACCAGCAGAC...TGAGCGTAAAGCACCTGCTTTACTTGCCAGTCTCCTGTGTAAATTACAGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS GCA 72 bp | CACCAGGGAGCCCTCGGGAGCAATCATCCTCACAAATaGAGGAACTTTGCTCTTCAGGTGGTAGATTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: HQGALGSNHPHK*RNFALQVVDFV Trigger: CACAAAATCTACCACCTGAAGAGCAAAGTTCCTGCATTTGTGAGGATGATTGCTCCCGAGGGCTCCCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS GCA 72 bp | TCCTTCTCCACCACCAGTTTCATTCTTACTCGCTTCTaGAACAGAGTAAAGCTGTCCAACCTGATACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFSTTSFILTRF*NRVKLSNLILL Trigger: CAAGAGTATCAGGTTGGACAGCTTTACTCTGTTGCAGAAGCGAGTAAGAATGAAACTGGTGGTGGAGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS TCA 72 bp | ACGGAACCCTTCTTACGCATTGTTTCTAGTTCTTTCTaGGTCTCATCCTCCATTCGCCTAATGTCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: TEPFLRIVSSSF*VSSSIRLMSSI Trigger: AATGGAAGACATTAGGCGAATGGAGGATGAGACTCAGAAAGAACTAGAAACAATGCGTAAGAAGGGTTCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086635.9 |
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| CDS CAA 72 bp | AGGGTCTTCATCAGCTTTGTAGTCTGCTGGTTCAACTaGACTTCGATCTGCAATGTCTATGTGGACAATTTC | + |
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Preference number: 6 (lower is better) Translates to: RVFISFVVCWFN*TSICNVYVDNF Trigger: GAAATTGTCCACATAGACATTGCAGATCGAAGTCAAGTTGAACCAGCAGACTACAAAGCTGATGAAGACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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| CDS CAA 90 bp | TCATCCTCCATTCGCCTAATGTCTTCCATTGTCAGGTCAATCCACTaGTCAATCCAACAAAAGAGCTGGCGATGTAAGTTCGTAAATATC | + |
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Preference number: 6 (lower is better) Translates to: SSSIRLMSSIVRSIH*SIQQKSWRCKFVNI Trigger: GATATTTACGAACTTACATCGCCAGCTCTTTTGTTGGATTGACAAGTGGATTGACCTGACAATGGAAGACATTAGGCGAATGGAGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086635.9 ENSMUST00000200298.2 |
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