Pregenerated sensors for PITPNA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017781Ensembl transcript IDs: ENSMUST00000102509.11, ENSMUST00000143219.8, ENSMUST00000179445.8, ENSMUST00000179521.8
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCCAGTGTCTCTCCACAAGAAGGCTGGAGCCCAGCAGGCCTTGTaGAGAGACACTGCTGCTCCCGCTGGGAGTAAAGCAGACCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SPVSLHKKAGAQQAL*RDTAAPAGSKADPG Trigger: TCCAGGGTCTGCTTTACTCCCAGCGGGAGCAGCAGTGTCTCTGCACAAGGCCTGCTGGGCTCCAGCCTTCTTGTGGAGAGACACTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CCA 90 bp | AGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTaGGCCTTCCTGTTGACCACTGTCTTGCAAAAAGTGCAGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: RLRPKMACHSGGWSC*AFLLTTVLQKVQKG Trigger: CCCTTTCTGCACTTTTTGCAAGACAGTGGTCAACAGGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR GCA 90 bp | GTGCTTTGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTaGTGTGCTAACTGTTCCAGGCTACAGTCACGGCTTGCTTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: VLCSFHSLGAWASPA*CANCSRLQSRLAFD Trigger: ATCAAAAGCAAGCCGTGACTGTAGCCTGGAACAGTTAGCACAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR GCA 90 bp | AGAAAGGCATCCTCAGTTTCTGCCCATCTAGAAAAGCCAGTGCTTTaGAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RKASSVSAHLEKPVL*SFHSLGAWASPACC Trigger: ACAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGCTTTTCTAGATGGGCAGAAACTGAGGATGCCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR GCA 90 bp | CACTGTCTTGCAAAAAGTGCAGAAAGGGCGGTGGCGCTAGTCGTCTaGTGTCATTCCTTTCACTGGGTCCTTTTGTCTCATCTCATCCAG | + |
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Preference number: 1 (lower is better) Translates to: HCLAKSAERAVALVV*CHSFHWVLLSHLIQ Trigger: CTGGATGAGATGAGACAAAAGGACCCAGTGAAAGGAATGACAGCAGACGACTAGCGCCACCGCCCTTTCTGCACTTTTTGCAAGACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR CCA 90 bp | GCCCTAAATCCAGGCTGGTCTCAGGAAATTCTAGTTCGGATCATTTaGATGCTTTCAAATGTGGGCAACAGCAGGGGCGCAAGGCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: ALNPGWSQEILVRII*MLSNVGNSRGARQV Trigger: TACCTGCCTTGCGCCCCTGCTGTTGCCCACATTTGAAAGCATCCAAATGATCCGAACTAGAATTTCCTGAGACCAGCCTGGATTTAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR TCA 90 bp | AGGGGAGGGCATACAGAAATGGGTCAGAGCACAGTGGAGAGAGGATaGGCTGTAAACACAGCAGCTACACCATGTATCTTAGAGGATCAG | + |
|
Preference number: 1 (lower is better) Translates to: RGGHTEMGQSTVERG*AVNTAATPCILEDQ Trigger: CTGATCCTCTAAGATACATGGTGTAGCTGCTGTGTTTACAGCTCATCCTCTCTCCACTGTGCTCTGACCCATTTCTGTATGCCCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR TCA 90 bp | CCTGGCAATCATGGGCTTGGATCACTACACACTGGGCTGACTGACTaGAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACT | + |
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Preference number: 1 (lower is better) Translates to: PGNHGLGSLHTGLTD*RRLGKCQVTQFYPT Trigger: AGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAGTCAGTCAGCCCAGTGTGTAGTGATCCAAGCCCATGATTGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR TCA 90 bp | GTACCCTGGCAATCATGGGCTTGGATCACTACACACTGGGCTGACTaGCTGAAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCC | + |
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Preference number: 1 (lower is better) Translates to: VPWQSWAWITTHWAD*LKKAWEMSGDTILS Trigger: GGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAGTCAGTCAGCCCAGTGTGTAGTGATCCAAGCCCATGATTGCCAGGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CCA 90 bp | TATTTGCTAAATTTTCTGAGACTGGCTGGGCCTTGGGTGCCTTCTTaGTGCTTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: YLLNFLRLAGPWVPS*CLEHANKRLLGAEV Trigger: GACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAATTTAGCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR CCA 90 bp | CAAGGAGAACGATCCATCCTACTTCTCACTCCCCTAGTAGAGATTTaGTCTCTAACAGGTACCCTGGCAATCATGGGCTTGGATCACTAC | + |
|
Preference number: 1 (lower is better) Translates to: QGERSILLLTPLVEI*SLTGTLAIMGLDHY Trigger: GTAGTGATCCAAGCCCATGATTGCCAGGGTACCTGTTAGAGACCAAATCTCTACTAGGGGAGTGAGAAGTAGGATGGATCGTTCTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CCA 90 bp | CATGGGGATGGAACAAGACAGGGACATTCCTCCTTTGTGTTTATGTaGGCAGGAGCCCTAAATCCAGGCTGGTCTCAGGAAATTCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: HGDGTRQGHSSFVFM*AGALNPGWSQEILV Trigger: AACTAGAATTTCCTGAGACCAGCCTGGATTTAGGGCTCCTGCCCACATAAACACAAAGGAGGAATGTCCCTGTCTTGTTCCATCCCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CCA 90 bp | GGGGTTATTTATTATTTGCTAAATTTTCTGAGACTGGCTGGGCCTTaGGTGCCTTCTTGGTGCTTAGAGCACGCAAACAAGAGGTTACTA | + |
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Preference number: 1 (lower is better) Translates to: GVIYYLLNFLRLAGP*VPSWCLEHANKRLL Trigger: TAGTAACCTCTTGTTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAATTTAGCAAATAATAAATAACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR CCA 90 bp | CATTCCTCCTTTGTGTTTATGTGGGCAGGAGCCCTAAATCCAGGCTaGTCTCAGGAAATTCTAGTTCGGATCATTTGGATGCTTTCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: HSSFVFMWAGALNPG*SQEILVRIIWMLSN Trigger: ATTTGAAAGCATCCAAATGATCCGAACTAGAATTTCCTGAGACCAGCCTGGATTTAGGGCTCCTGCCCACATAAACACAAAGGAGGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CAA 90 bp | CCCTCCCCAGTGTCTCTCCACAAGAAGGCTGGAGCCCAGCAGGCCTaGTGCAGAGACACTGCTGCTCCCGCTGGGAGTAAAGCAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: PSPVSLHKKAGAQQA*CRDTAAPAGSKADP Trigger: AGGGTCTGCTTTACTCCCAGCGGGAGCAGCAGTGTCTCTGCACAAGGCCTGCTGGGCTCCAGCCTTCTTGTGGAGAGACACTGGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGCTTTGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTGAGAGAGGATTATTGCTaGGTGGCAGCACCAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ASALQLPLPWSLGFPSLLREDYC*VAAPAQ Trigger: TTGGGCTGGTGCTGCCACTCAGCAATAATCCTCTCT...CAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCTTTTCCACTTTGTTCTaGAAGCCCCACCACTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: GCVRRWPATQEGGAAGPSFSTLF*KPHHLN Trigger: GTTCAAGTGGTGGGGCTTGCAGAACAAAGTGGAAAA...GGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCGCATTGCCAAAGATCTaGCCAGGAAGCAAAATAGCT | + |
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Preference number: 2 (lower is better) Translates to: GCVRRWPATQEGGAAGPSALPKI*PGSKIA Trigger: AGCTATTTTGCTTCCTGGGCAGATCTTTGGCAATGC...GGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTTCTCCAGCTGGGCAGTGGTGGGGTCTTGTAGGCTCTACAGAGAGATCGGAGGGTGGAGCTGCTaGGCCTTCCTGTTGACCACT | + |
|
Preference number: 2 (lower is better) Translates to: GQFSSWAVVGSCRLYREIGGWSC*AFLLTT Trigger: AGTGGTCAACAGGAAGGCCCAGCAGCTCCACCCTCC...GATCTCTCTGTAGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGAACTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCTTCCTCTCTCCCCAAGTaGATATTCAGCATTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AASEDGLPLRRVELLGLPSSLPK*IFSIAK Trigger: TTTGGCAATGCTGAATATTCACTTGGGGAGAGAGGA...AGGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | TCGGATCATTTGGATGCTTTCAAATGTGGGCAACAGCAGGGGCGCAAGGCAGGTCGTCCGAAGATGGCCTaGCACTCAGGAGGGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SDHLDAFKCGQQQGRKAGRPKMA*HSGGWS Trigger: GCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACG...ACCTGCCTTGCGCCCCTGCTGTTGCCCACATTTGAAAGCATCCAAATGATCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCGTGAATATTCAGCATTaGCAAAGATCTGCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GCVRRWPATQEGGAAGPSVNIQH*QRSAQE Trigger: TTCCTGGGCAGATCTTTGGCAATGCTGAATATTCAC...GGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | TCGGATCATTTGGATGCTTTCAAATGTGGGCAACAGCAGGGGCGCAAGGCAGGTGGCTGCGTCCGAAGATaGCCTGCCACTCAGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SDHLDAFKCGQQQGRKAGGCVRR*PATQEG Trigger: ACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCC...ACCTGCCTTGCGCCCCTGCTGTTGCCCACATTTGAAAGCATCCAAATGATCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CAA 90 bp | CAGAAAGGCATCCTCAGTTTCTGCCCATCTAGAAAAGCCAGTGCTTaGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QKGILSFCPSRKASA*QLPLPWSLGFPSLL Trigger: CAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGCTTTTCTAGATGGGCAGAAACTGAGGATGCCTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCAGCAGGCCTTGTGCAGAGACACTGCTGCTCCCGCTGGGAGTAAAGCAGCATCACCAGCCCTCTTaGGTGCTAGTTAATTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: EPSRPCAETLLLPLGVKQHHQPS*VLVNFG Trigger: CCCAAAATTAACTAGCACTCAAGAGGGCTGGTGATG...CTGCTTTACTCCCAGCGGGAGCAGCAGTGTCTCTGCACAAGGCCTGCTGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGTCCTCTCTCCCCAAGTaGATATTCAGCATTGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: HRKAASEDGLPLRRVELLSSLPK*IFSIAK Trigger: TTTGGCAATGCTGAATATTCACTTGGGGAGAGAGGA...CAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGTGCTTTGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTGTTGCATGCTTGTTTGTaGAGCATGAAAAGACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ASALQLPLPWSLGFPSLLLHACL*SMKRPG Trigger: TCCTGGTCTTTTCATGCTGCACAAACAAGCATGCAA...CAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTTCTCCAGCTGGGCAGTGGTGGGGTCTTGTAGGCTCTACAGAGAGATCTTTTCTGAGACTGGCTaGGCCTTGGGTGCCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GQFSSWAVVGSCRLYREIFSETG*ALGAFL Trigger: CAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAA...GATCTCTCTGTAGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGAACTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCTGAGATTTAAATTTTGCTaGGTCTTCCTCTGCCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LRPKMACHSGGWSCWAFLRFKFC*VFLCLV Trigger: TACAAGGCAGAGGAAGACCCAGCAAAATTTAAATCT...CAGGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGAAGAATGTGGAAGGATACACACATGCCCACAGCAGTGACCCTGACCTGTCTCCAGCTGGGCAGTaGTGGGGTCTTGTAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: ERKNVEGYTHAHSSDPDLSPAGQ*WGLVGS Trigger: AGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGA...CAGGTCAGGGTCACTGCTGTGGGCATGTGTGTATCCTTCCACATTCTTCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTGACCCTGACCTGTCCCTCCCCAGTGTCTCTCCACAAGAAGGCTGGAGCGCCCTAAATCCAGGCTaGTCTCAGGAAATTCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSDPDLSLPSVSPQEGWSALNPG*SQEILV Trigger: AACTAGAATTTCCTGAGACCAGCCTGGATTTAGGGC...GCTCCAGCCTTCTTGTGGAGAGACACTGGGGAGGGACAGGTCAGGGTCACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCCGCTCCTGTGGGGTCTaGATGGTGTCAACAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LKKAWEMSGDTILSHSPTRSCGV*MVSTGH Trigger: ATGGCCTGTTGACACCATTCAGACCCCACAGGAGCG...GGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGACAGATTTAAATTTTaGTGGGTCTTCCTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: HRKAASEDGLPLRRVELLDRFKF*WVFLCL Trigger: AAGGCAGAGGAAGACCCAGCAAAATTTAAATCTGTC...CAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR-3UTR CCA 90 bp | TCGGATCATTTGGATGCTTTCAAATGTGGGCAACAGCAGGGGCGCAAGGCAGGTTTTTCTGAGACTGGCTaGGCCTTGGGTGCCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SDHLDAFKCGQQQGRKAGFSETG*ALGAFL Trigger: CAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAA...ACCTGCCTTGCGCCCCTGCTGTTGCCCACATTTGAAAGCATCCAAATGATCCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCCCAGCTGGGCAGTGGTaGGGTCTTGTAGGCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: LKKAWEMSGDTILSHSPTPAGQW*GLVGST Trigger: TGTAGAGCCTACAAGACCCCACCACTGCCCAGCTGG...GGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGTTTATGTGGGCAGGAGCCCTAAATCCAGGCTGGTCTCAGGAAATTCTACACTCCCTTGGAGCCTaGGCTTCCCCAGCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FVFMWAGALNPGWSQEILHSLGA*ASPACC Trigger: ACAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTG...TAGAATTTCCTGAGACCAGCCTGGATTTAGGGCTCCTGCCCACATAAACACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGAAGAATGTGGAAGGATACACACATGCCCACAGCAGTGACCCTGACCTGGCTGGGCCTTCCTGTTaGCCACTGTCTTGCAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: ERKNVEGYTHAHSSDPDLAGPSC*PLSCKK Trigger: CTTTTTGCAAGACAGTGGTCAACAGGAAGGCCCAGC...CAGGTCAGGGTCACTGCTGTGGGCATGTGTGTATCCTTCCACATTCTTCCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGATCATTTGGATGCTTTCAAATGTGGGCAACAGCAGGGGCGCAAGGCAGGTGTCACGGCTTGCTTTTaGTTGTCCAGGACAGAACTC | + |
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Preference number: 2 (lower is better) Translates to: SDHLDAFKCGQQQGRKAGVTACF*LSRTEL Trigger: GAGTTCTGTCCTGGACAATCAAAAGCAAGCCGTGAC...ACCTGCCTTGCGCCCCTGCTGTTGCCCACATTTGAAAGCATCCAAATGATCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGAAGAATGTGGAAGGATACACACATGCCCACAGCAGTGACCCTGACCTGACACACTGGGCTGACTaGCTGAAGAAGGCTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ERKNVEGYTHAHSSDPDLTHWAD*LKKAWE Trigger: TTCCCAAGCCTTCTTCAGTCAGTCAGCCCAGTGTGT...CAGGTCAGGGTCACTGCTGTGGGCATGTGTGTATCCTTCCACATTCTTCCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCAGCAGGCCTTGTGCAGAGACACTGCTGCTCCCGCTGGGAGTAAAGCAGGCTGAGTTCTTTATCTaGAAATTCTTGTCCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: EPSRPCAETLLLPLGVKQAEFFI*KFLSSD Trigger: ATCACTGGACAAGAATTTGCAGATAAAGAACTCAGC...CTGCTTTACTCCCAGCGGGAGCAGCAGTGTCTCTGCACAAGGCCTGCTGGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCGAGATCCAGACAGAGTaGGCAACAGGAGGGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LKKAWEMSGDTILSHSPTEIQTE*ATGGLR Trigger: TCTCAGCCCTCCTGTTGCCCACTCTGTCTGGATCTC...GGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCTATCCCACTCTCCCACCAGAAAGGCATCCTCAGTTTCTGCCCATCTAGATCTCCAGCTGGGCAGTaGTGGGGTCTTGTAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NSIPLSHQKGILSFCPSRSPAGQ*WGLVGS Trigger: AGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGA...TCTAGATGGGCAGAAACTGAGGATGCCTTTCTGGTGGGAGAGTGGGATAGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CAA 90 bp | AGCCCTAAATCCAGGCTGGTCTCAGGAAATTCTAGTTCGGATCATTaGGATGCTTTCAAATGTGGGCAACAGCAGGGGCGCAAGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SPKSRLVSGNSSSDH*DAFKCGQQQGRKAG Trigger: ACCTGCCTTGCGCCCCTGCTGTTGCCCACATTTGAAAGCATCCAAATGATCCGAACTAGAATTTCCTGAGACCAGCCTGGATTTAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGATCATTTGGATGCTTTCAAATGTGGGCAACAGCAGGGGCGCAAGGCAGGTCTTGTTTGTGCAGCATaGAAAGACCAGGACTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SDHLDAFKCGQQQGRKAGLVCAA*KDQDSC Trigger: GCAAGAGTCCTGGTCTTTTCATGCTGCACAAACAAG...ACCTGCCTTGCGCCCCTGCTGTTGCCCACATTTGAAAGCATCCAAATGATCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGAAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCCAGTGTGGGGCAGGATaGGCTGAGTTCTTTATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LKKAWEMSGDTILSHSPTQCGAG*AEFFIC Trigger: GCAGATAAAGAACTCAGCTCATCCTGCCCCACACTG...GGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTGTTGACCACTGTCTTGCAAAAAGTGCAGAAAGGGCGGTGGCGCTAGTCTGCTGGGTCTTCCTCTaGCTTGTAATCCTTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPVDHCLAKSAERAVALVCWVFL*LVILAK Trigger: CTTAGCAAGGATTACAAGGCAGAGGAAGACCCAGCA...GACTAGCGCCACCGCCCTTTCTGCACTTTTTGCAAGACAGTGGTCAACAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGAACAGACGCTTCTCTTaGTTATGTATAAAGTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HRKAASEDGLPLRRVELLNRRFS*LCIKFS Trigger: GGAAAACTTTATACATAAGCAAGAGAAGCGTCTGTT...CAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR-3UTR TCA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCAGCTGGGCCTTCCTGTTaGCCACTGTCTTGCAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GSGSRTHRLYNTRRSICSAGPSC*PLSCKK Trigger: CTTTTTGCAAGACAGTGGTCAACAGGAAGGCCCAGC...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACAGTTCTCCAGCTGGGCAGTGGTGGGGTCTTGTAGGCTCTACAGAGAGATCAATATTAACCAGAGATaGAATGACTCGAGTAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GQFSSWAVVGSCRLYREININQR*NDSSRG Trigger: ACCCCTACTCGAGTCATTGCATCTCTGGTTAATATT...GATCTCTCTGTAGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGAACTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTCTATCCCACTCTCCCACCAGAAAGGCATCCTCAGTTTCTGCCCATCTAGACCTTGGGTGCCTTCTTaGTGCTTAGAGCACGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: NSIPLSHQKGILSFCPSRPWVPS*CLEHAN Trigger: GTTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGG...TCTAGATGGGCAGAAACTGAGGATGCCTTTCTGGTGGGAGAGTGGGATAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGTGAGGAGACTAATACCTTGAAAGGTGTCAGTAACCAGACATCTCCTGGTAGACTGGCTGGGCCTTaGGTGCCTTCTTGGTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QGEETNTLKGVSNQTSPGRLAGP*VPSWCL Trigger: TAAGCACCAAGAAGGCACCCAAGGCCCAGCCAGTCT...ACCAGGAGATGTCTGGTTACTGACACCTTTCAAGGTATTAGTCTCCTCACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGTCTGTAAAAGAAGTAGCACTAAGAACCAACCCAAGGACGTCAGAGGTCCAGAGATCCAGACAGAGTaGGCAACAGGAGGGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VVCKRSSTKNQPKDVRGPEIQTE*ATGGLR Trigger: TCTCAGCCCTCCTGTTGCCCACTCTGTCTGGATCTC...TGGACCTCTGACGTCCTTGGGTTGGTTCTTAGTGCTACTTCTTTTACAGACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGTGAGGAGACTAATACCTTGAAAGGTGTCAGTAACCAGACATCTCCTGGTGCTGGGCCTTCCTGTTaGCCACTGTCTTGCAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QGEETNTLKGVSNQTSPGAGPSC*PLSCKK Trigger: CTTTTTGCAAGACAGTGGTCAACAGGAAGGCCCAGC...ACCAGGAGATGTCTGGTTACTGACACCTTTCAAGGTATTAGTCTCCTCACCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR CAA 90 bp | TTATTTGCTAAATTTTCTGAGACTGGCTGGGCCTTGGGTGCCTTCTaGGTGCTTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LFAKFSETGWALGAF*VLRARKQEVTRSRG Trigger: ACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAATTTAGCAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR CAA 90 bp | ACAAGGAGAACGATCCATCCTACTTCTCACTCCCCTAGTAGAGATTaGGTCTCTAACAGGTACCCTGGCAATCATGGGCTTGGATCACTA | + |
|
Preference number: 2 (lower is better) Translates to: TRRTIHPTSHSPSRD*VSNRYPGNHGLGSL Trigger: TAGTGATCCAAGCCCATGATTGCCAGGGTACCTGTTAGAGACCAAATCTCTACTAGGGGAGTGAGAAGTAGGATGGATCGTTCTCCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTGAAGCCACATTCCTATTGTGAGGAGCTGGGGGTAGGTGTCTCTGTATTTGCATTGCCAAAGATCTaGCCAGGAAGCAAAATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLKPHSYCEELGVGVSVFALPKI*PGSKIA Trigger: AGCTATTTTGCTTCCTGGGCAGATCTTTGGCAATGC...AAATACAGAGACACCTACCCCCAGCTCCTCACAATAGGAATGTGGCTTCAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGAAGAATGTGGAAGGATACACACATGCCCACAGCAGTGACCCTGACCTGTTGCATGCTTGTTTGTaGAGCATGAAAAGACCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ERKNVEGYTHAHSSDPDLLHACL*SMKRPG Trigger: TCCTGGTCTTTTCATGCTGCACAAACAAGCATGCAA...CAGGTCAGGGTCACTGCTGTGGGCATGTGTGTATCCTTCCACATTCTTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGTGAGGAGACTAATACCTTGAAAGGTGTCAGTAACCAGACATCTCCTGGTGAGGGCATACAGAAATaGGTCAGAGCACAGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QGEETNTLKGVSNQTSPGEGIQK*VRAQWR Trigger: TCTCCACTGTGCTCTGACCCATTTCTGTATGCCCTC...ACCAGGAGATGTCTGGTTACTGACACCTTTCAAGGTATTAGTCTCCTCACCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTGTTTATGTGGGCAGGAGCCCTAAATCCAGGCTGGTCTCAGGAAATTCTAGAGGGCATACAGAAATaGGTCAGAGCACAGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FVFMWAGALNPGWSQEILEGIQK*VRAQWR Trigger: TCTCCACTGTGCTCTGACCCATTTCTGTATGCCCTC...TAGAATTTCCTGAGACCAGCCTGGATTTAGGGCTCCTGCCCACATAAACACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR TCA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCATCCTCTCTCCCCAAGTaGATATTCAGCATTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSGSRTHRLYNTRRSICSSSLPK*IFSIAK Trigger: TTTGGCAATGCTGAATATTCACTTGGGGAGAGAGGA...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCGTGAATATTCAGCATTaGCAAAGATCTGCCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LKKAWEMSGDTILSHSPTVNIQH*QRSAQE Trigger: TTCCTGGGCAGATCTTTGGCAATGCTGAATATTCAC...GGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAAGGAGAACGATCCATCCTACTTCTCACTCCCCTAGTAGAGATTTGGTCAGGATTATTGCTGAGTaGCAGCACCAGCCCAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KTRRTIHPTSHSPSRDLVRIIAE*QHQPKR Trigger: CCTTTTGGGCTGGTGCTGCCACTCAGCAATAATCCT...GACCAAATCTCTACTAGGGGAGTGAGAAGTAGGATGGATCGTTCTCCTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAAGGAGAACGATCCATCCTACTTCTCACTCCCCTAGTAGAGATTTGGTCTGGCAATCATGGGCTTaGATCACTACACACTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KTRRTIHPTSHSPSRDLVWQSWA*ITTHWA Trigger: AGCCCAGTGTGTAGTGATCCAAGCCCATGATTGCCA...GACCAAATCTCTACTAGGGGAGTGAGAAGTAGGATGGATCGTTCTCCTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CAA 90 bp | TTTGTATGCACACATATATGGGCAGTCTTTCTGATTGACAAGTTCTaGCTTCCAATTCGGGCCCAAAGGTCCGCGTCCTGTTTTGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: FVCTHIWAVFLIDKF*LPIRAQRSASCFDR Trigger: TCTGTCAAAACAGGACGCGGACCTTTGGGCCCGAATTGGAAGCAAGAACTTGTCAATCAGAAAGACTGCCCATATATGTGTGCATACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGTTTATGTGGGCAGGAGCCCTAAATCCAGGCTGGTCTCAGGAAATTCTAGCATTGCCAAAGATCTaGCCAGGAAGCAAAATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FVFMWAGALNPGWSQEILALPKI*PGSKIA Trigger: AGCTATTTTGCTTCCTGGGCAGATCTTTGGCAATGC...TAGAATTTCCTGAGACCAGCCTGGATTTAGGGCTCCTGCCCACATAAACACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CAA 90 bp | AGGGGTTATTTATTATTTGCTAAATTTTCTGAGACTGGCTGGGCCTaGGGTGCCTTCTTGGTGCTTAGAGCACGCAAACAAGAGGTTACT | + |
|
Preference number: 2 (lower is better) Translates to: RGYLLFAKFSETGWA*GAFLVLRARKQEVT Trigger: AGTAACCTCTTGTTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAATTTAGCAAATAATAAATAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR CAA 90 bp | CCAAGTGCATGCCTAAAGACTCTACAAGGTGAGGAGACTAATACCTaGAAAGGTGTCAGTAACCAGACATCTCCTGGTCTTAAAAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: PSACLKTLQGEETNT*KGVSNQTSPGLKRT Trigger: GGTTCTTTTAAGACCAGGAGATGTCTGGTTACTGACACCTTTCAAGGTATTAGTCTCCTCACCTTGTAGAGTCTTTAGGCATGCACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGTCTGTAAAAGAAGTAGCACTAAGAACCAACCCAAGGACGTCAGAGGTCCACAGTCCCTGAGACACTaGCTTATTGCACTTAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VVCKRSSTKNQPKDVRGPQSLRH*LIALRN Trigger: ATTTCTAAGTGCAATAAGGCAGTGTCTCAGGGACTG...TGGACCTCTGACGTCCTTGGGTTGGTTCTTAGTGCTACTTCTTTTACAGACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCTTCCATCCTCCGAATGTCATCCATAGTCAGATCAACCCATTTATCGAGGGCAGTCTTTCTGATTaGCAAGTTCTTGCTTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LFFHPPNVIHSQINPFIEGSLSD*QVLASN Trigger: ATTGGAAGCAAGAACTTGTCAATCAGAAAGACTGCC...CTCGATAAATGGGTTGATCTGACTATGGATGACATTCGGAGGATGGAAGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR-3UTR GCA 90 bp | GTAGTCTGTAAAAGAAGTAGCACTAAGAACCAACCCAAGGACGTCAGAGGTCCAAATATTAACCAGAGATaGAATGACTCGAGTAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: VVCKRSSTKNQPKDVRGPNINQR*NDSSRG Trigger: ACCCCTACTCGAGTCATTGCATCTCTGGTTAATATT...TGGACCTCTGACGTCCTTGGGTTGGTTCTTAGTGCTACTTCTTTTACAGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGAATATTCAGCATTGCCAAAGATCTGCCCAGGAAGCAAAATAGCTCAGTTTGCTCATTGGGAAGACTaGGACCATCACTTGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: SEYSALPKICPGSKIAQFAHWED*DHHLEI Trigger: TATTTCCAAGTGATGGTCTCAGTCTTCCCAATGAGC...AAACTGAGCTATTTTGCTTCCTGGGCAGATCTTTGGCAATGCTGAATATTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGTCTGTAAAAGAAGTAGCACTAAGAACCAACCCAAGGACGTCAGAGGTCCAAAAAAGCTTTTTGCATaGTTGTTTGTGCAGCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: VVCKRSSTKNQPKDVRGPKKLFA*LFVQHE Trigger: TTCATGCTGCACAAACAAGCATGCAAAAAGCTTTTT...TGGACCTCTGACGTCCTTGGGTTGGTTCTTAGTGCTACTTCTTTTACAGACTAC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CAA 90 bp | TCTGCAAATTCTTGTCCAGTGATTAGAAACAGGAAGGTACATGTTTaGCTAGGGATAAAAAGCTTTTTGCATGCTTGTTTGTGCAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: SANSCPVIRNRKVHV*LGIKSFLHACLCSM Trigger: CATGCTGCACAAACAAGCATGCAAAAAGCTTTTTATCCCTAGCAAAACATGTACCTTCCTGTTTCTAATCACTGGACAAGAATTTGCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CCA 72 bp | CCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTaGGCCTTCCTGTTGACCACTGTCTTGCAAAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PKMACHSGGWSC*AFLLTTVLQKV Trigger: CACTTTTTGCAAGACAGTGGTCAACAGGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR CCA 72 bp | CTCCTGTGGGGTCTGAATGGTGTCAACAGGCCATACTaGACAGTTCTCCAGCTGGGCAGTGGTGGGGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLWGLNGVNRPY*TVLQLGSGGVL Trigger: CAAGACCCCACCACTGCCCAGCTGGAGAACTGTCCAGTATGGCCTGTTGACACCATTCAGACCCCACAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGAAGAATGTGGAAGGATACACACATGCCCACAGCAGTGACCCTGACCTGGGAGCCCAGCAGGCCTaGTGCAGAGACACTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ERKNVEGYTHAHSSDPDLGAQQA*CRDTAA Trigger: AGCAGCAGTGTCTCTGCACAAGGCCTGCTGGGCTCC...CAGGTCAGGGTCACTGCTGTGGGCATGTGTGTATCCTTCCACATTCTTCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR CCA 72 bp | CAGGCCATACTGGACAGTTCTCCAGCTGGGCAGTGGTaGGGTCTTGTAGGCTCTACAGAGAGATCCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QAILDSSPAGQW*GLVGSTERSRQ Trigger: CTGTCTGGATCTCTCTGTAGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGAACTGTCCAGTATGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR CCA 72 bp | GGAGCACGGACATACAGCGCTCCTGTGGGGTCTGAATaGTGTCAACAGGCCATACTGGACAGTTCTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GARTYSAPVGSE*CQQAILDSSPA Trigger: AGCTGGAGAACTGTCCAGTATGGCCTGTTGACACCATTCAGACCCCACAGGAGCGCTGTATGTCCGTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGAGTGAATATTCAGCATaGCCAAAGATCTGCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HRKAASEDGLPLRRVELLSEYSA*PKICPG Trigger: TCCTGGGCAGATCTTTGGCAATGCTGAATATTCACT...CAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR GCA 72 bp | TCCTCAGTTTCTGCCCATCTAGAAAAGCCAGTGCTTTaGAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSVSAHLEKPVL*SFHSLGAWASP Trigger: TGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGCTTTTCTAGATGGGCAGAAACTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR CCA 72 bp | CAACAGGCCATACTGGACAGTTCTCCAGCTGGGCAGTaGTGGGGTCTTGTAGGCTCTACAGAGAGATCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QQAILDSSPAGQ*WGLVGSTERSR Trigger: TCTGGATCTCTCTGTAGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGAACTGTCCAGTATGGCCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCCAGCAGGCCTTGTGCAGAGACACTGCTGCTCCCGCTGGGAGTAAAGCAGTACCAGACGGTCTATTaGTTCACAATGTTAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: EPSRPCAETLLLPLGVKQYQTVY*FTMLKG Trigger: GCCCTTTAACATTGTGAACAAATAGACCGTCTGGTA...CTGCTTTACTCCCAGCGGGAGCAGCAGTGTCTCTGCACAAGGCCTGCTGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | AAAAGGAGCACGGACATACAGCGCTCCTGTGGGGTCTaGATGGTGTCAACAGGCCATACTGGACAGTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRSTDIQRSCGV*MVSTGHTGQFS Trigger: GGAGAACTGTCCAGTATGGCCTGTTGACACCATTCAGACCCCACAGGAGCGCTGTATGTCCGTGCTCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATGAGCACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGTGAATATTCAGCATaGCCAAAGATCTGCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RMSTERLRPKMACHSGGWSEYSA*PKICPG Trigger: TCCTGGGCAGATCTTTGGCAATGCTGAATATTCACT...CCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTGCTCATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR GCA 72 bp | GCAAAAAGTGCAGAAAGGGCGGTGGCGCTAGTCGTCTaGTGTCATTCCTTTCACTGGGTCCTTTTGTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: AKSAERAVALVV*CHSFHWVLLSH Trigger: ATGAGACAAAAGGACCCAGTGAAAGGAATGACAGCAGACGACTAGCGCCACCGCCCTTTCTGCACTTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
||
| 3UTR CCA 72 bp | GGAACAAGACAGGGACATTCCTCCTTTGTGTTTATGTaGGCAGGAGCCCTAAATCCAGGCTGGTCTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTRQGHSSFVFM*AGALNPGWSQE Trigger: TTCCTGAGACCAGCCTGGATTTAGGGCTCCTGCCCACATAAACACAAAGGAGGAATGTCCCTGTCTTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGTCAGGGGTCTGAAGCCACTGTTGACCACTGTCTaGCAAAAAGTGCAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LEHANKRLLGAEVRGLKPLLTTV*QKVQKG Trigger: CCCTTTCTGCACTTTTTGCAAGACAGTGGTCAACAG...TGGCTTCAGACCCCTGACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTCTGTAAAAGAAGTAGCACTAAGAACCAACCCAAGGACGTCAGAGGTCCAGCCTTGGGTGCCTTCTaGGTGCTTAGAGCACGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VVCKRSSTKNQPKDVRGPALGAF*VLRARK Trigger: TTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGGC...TGGACCTCTGACGTCCTTGGGTTGGTTCTTAGTGCTACTTCTTTTACAGACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | CATGGGCTTGGATCACTACACACTGGGCTGACTGACTaGAGAAGGCTTGGGAAATGTCAGGTGACACAATTC | + |
|
Preference number: 3 (lower is better) Translates to: HGLGSLHTGLTD*RRLGKCQVTQF Trigger: GAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAGTCAGTCAGCCCAGTGTGTAGTGATCCAAGCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | CAATCATGGGCTTGGATCACTACACACTGGGCTGACTaGCTGAAGAAGGCTTGGGAAATGTCAGGTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: QSWAWITTHWAD*LKKAWEMSGDT Trigger: TGTGTCACCTGACATTTCCCAAGCCTTCTTCAGTCAGTCAGCCCAGTGTGTAGTGATCCAAGCCCATGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR CCA 72 bp | AATTTTCTGAGACTGGCTGGGCCTTGGGTGCCTTCTTaGTGCTTAGAGCACGCAAACAAGAGGTTACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NFLRLAGPWVPS*CLEHANKRLLG Trigger: TCCTAGTAACCTCTTGTTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR CCA 72 bp | CCAACACTTGTCCAGCAGCAACACCACCCATGGGGATaGAACAAGACAGGGACATTCCTCCTTTGTGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PTLVQQQHHPWG*NKTGTFLLCVY Trigger: ATAAACACAAAGGAGGAATGTCCCTGTCTTGTTCCATCCCCATGGGTGGTGTTGCTGCTGGACAAGTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCCTGTTGACCACTGTCTaGCAAAAAGTGCAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKKAWEMSGDTILSHSPTLLTTV*QKVQKG Trigger: CCCTTTCTGCACTTTTTGCAAGACAGTGGTCAACAG...GGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | GGAAGCATCCAGTCAGGATGTCACAGGTGCAGTCCCTaGGACACTGCCTTATTGCACTTAGAAATGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSIQSGCHRCSP*DTALLHLEMSK Trigger: CTTACTCATTTCTAAGTGCAATAAGGCAGTGTCTCAGGGACTGCACCTGTGACATCCTGACTGGATGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | ATGCCTCTTCTCCAACTTTCCCATGCTACTAGCAGCTaGTATGCTAATCACCAAGATGCCCCAAGTGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: MPLLQLSHATSS*YANHQDAPSAC Trigger: GCATGCACTTGGGGCATCTTGGTGATTAGCATATCAGCTGCTAGTAGCATGGGAAAGTTGGAGAAGAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCAACAAAAGGCAGCTCATaGGGAAGACTGAGACCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GSGSRTHRLYNTRRSICSTKGSS*GRLRPS Trigger: TGATGGTCTCAGTCTTCCCAATGAGCTGCCTTTTGT...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTTCCATCCTCCGAATGTCATCCATAGTCAGATCAACCCATTTATCGAGTGCAAGCCCCACCACTaGAACTTGACAGTAACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LFFHPPNVIHSQINPFIECKPHH*NLTVTS Trigger: ACTGGTTACTGTCAAGTTCAAGTGGTGGGGCTTGCA...CTCGATAAATGGGTTGATCTGACTATGGATGACATTCGGAGGATGGAAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTCTGTAAAAGAAGTAGCACTAAGAACCAACCCAAGGACGTCAGAGGTCCAAGTGAATATTCAGCATaGCCAAAGATCTGCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VVCKRSSTKNQPKDVRGPSEYSA*PKICPG Trigger: TCCTGGGCAGATCTTTGGCAATGCTGAATATTCACT...TGGACCTCTGACGTCCTTGGGTTGGTTCTTAGTGCTACTTCTTTTACAGACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAAGGAGAACGATCCATCCTACTTCTCACTCCCCTAGTAGAGATTTGGTCAGTCACGGCTTGCTTTaGATTGTCCAGGACAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: KTRRTIHPTSHSPSRDLVSHGLL*IVQDRT Trigger: AGTTCTGTCCTGGACAATCAAAAGCAAGCCGTGACT...GACCAAATCTCTACTAGGGGAGTGAGAAGTAGGATGGATCGTTCTCCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | CATACAGAAATGGGTCAGAGCACAGTGGAGAGAGGATaGGCTGTAAACACAGCAGCTACACCATGTATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HTEMGQSTVERG*AVNTAATPCIL Trigger: TAAGATACATGGTGTAGCTGCTGTGTTTACAGCTCATCCTCTCTCCACTGTGCTCTGACCCATTTCTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | TTGATTGTCCAGGACAGAACTCAGTGTGGGGCAGGATaGGCTGAGTTCTTTATCTGCAAATTCTTGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LIVQDRTQCGAG*AEFFICKFLSS Trigger: ACTGGACAAGAATTTGCAGATAAAGAACTCAGCTCATCCTGCCCCACACTGAGTTCTGTCCTGGACAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR CCA 72 bp | TATTATTTGCTAAATTTTCTGAGACTGGCTGGGCCTTaGGTGCCTTCTTGGTGCTTAGAGCACGCAAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: YYLLNFLRLAGP*VPSWCLEHANK Trigger: CTTGTTTGCGTGCTCTAAGCACCAAGAAGGCACCCAAGGCCCAGCCAGTCTCAGAAAATTTAGCAAATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR CCA 72 bp | TTTGTGTTTATGTGGGCAGGAGCCCTAAATCCAGGCTaGTCTCAGGAAATTCTAGTTCGGATCATTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FVFMWAGALNPG*SQEILVRIIWM Trigger: CATCCAAATGATCCGAACTAGAATTTCCTGAGACCAGCCTGGATTTAGGGCTCCTGCCCACATAAACACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR TCA 72 bp | TCTAGAAATAGCTATAGTAAGGGATTGAAAGTTGCCTaGAGAATGAGCACAGAAAGGCTGCGTCCGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SRNSYSKGLKVA*RMSTERLRPKM Trigger: CATCTTCGGACGCAGCCTTTCTGTGCTCATTCTTCAGGCAACTTTCAATCCCTTACTATAGCTATTTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR GCA 72 bp | TGTTTTGACAGATTTAAATTTTGCTGGGTCTTCCTCTaGCTTGTAATCCTTGCTAAGTACTTGGCTTCGATC | + |
|
Preference number: 3 (lower is better) Translates to: CFDRFKFCWVFL*LVILAKYLASI Trigger: GATCGAAGCCAAGTACTTAGCAAGGATTACAAGGCAGAGGAAGACCCAGCAAAATTTAAATCTGTCAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
||
| 3UTR TCA 72 bp | AGATCTTATGAAGTGCTGAAGGAGACAAATATCTTTTaGCCCTCATATCATGTAAACTATCTGCGTAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: RSYEVLKETNIF*PSYHVNYLRRL Trigger: TAGTCTACGCAGATAGTTTACATGATATGAGGGTCAAAAGATATTTGTCTCCTTCAGCACTTCATAAGATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCTATTCAGGGCGCCTTCTaGGGCCAGCATTCGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: AASEDGLPLRRVELLGLPIQGAF*GQHSNK Trigger: TTTGTTCGAATGCTGGCCCCAGAAGGCGCCCTGAAT...AGGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGACCCTGACCTGTCCCTCCCCAGTGTCTCTCCACAAGAAGGCTGGAGCATTCAGGGCGCCTTCTaGGGCCAGCATTCGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSDPDLSLPSVSPQEGWSIQGAF*GQHSNK Trigger: TTTGTTCGAATGCTGGCCCCAGAAGGCGCCCTGAAT...GCTCCAGCCTTCTTGTGGAGAGACACTGGGGAGGGACAGGTCAGGGTCACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCAGCAGGCCTTGTGCAGAGACACTGCTGCTCCCGCTGGGAGTAAAGCAGTTATGCACATTCTCCTaGGTGCCAAGGTCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPSRPCAETLLLPLGVKQLCTFS*VPRSGL Trigger: CAAGCCAGACCTTGGCACCCAGGAGAATGTGCATAA...CTGCTTTACTCCCAGCGGGAGCAGCAGTGTCTCTGCACAAGGCCTGCTGGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGCTTTGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTGTTTTCCACTTTGTTCTaGAAGCCCCACCACTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASALQLPLPWSLGFPSLLFSTLF*KPHHLN Trigger: GTTCAAGTGGTGGGGCTTGCAGAACAAAGTGGAAAA...CAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGCTTTGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTGCCAAGGTCTGGCTTGTaGCAGGTTTCAATTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ASALQLPLPWSLGFPSLLPRSGL*QVSILI Trigger: GATTAAAATTGAAACCTGGCACAAGCCAGACCTTGG...CAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR GCA 90 bp | CACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGTTCCACATGTTTCCATaGCTCAGGCTCCAGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: HRKAASEDGLPLRRVELLFHMFP*LRLQFM Trigger: CATAAACTGGAGCCTGAGGCATGGAAACATGTGGAA...CAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR GCA 90 bp | GCACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTTTCCACATGTTTCCATaGCTCAGGCTCCAGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: AQKGCVRRWPATQEGGAAFHMFP*LRLQFM Trigger: CATAAACTGGAGCCTGAGGCATGGAAACATGTGGAA...AGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCTAGATTTAAATTTTGCTaGGTCTTCCTCTGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AASEDGLPLRRVELLGLPRFKFC*VFLCLV Trigger: TACAAGGCAGAGGAAGACCCAGCAAAATTTAAATCT...AGGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| 3UTR CAA 72 bp | GTGCTAACTGTTCCAGGCTACAGTCACGGCTTGCTTTaGATTGTCCAGGACAGAACTCAGTGTGGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTVPGYSHGLL*IVQDRTQCGAG Trigger: TCCTGCCCCACACTGAGTTCTGTCCTGGACAATCAAAAGCAAGCCGTGACTGTAGCCTGGAACAGTTAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR CAA 72 bp | CCTGCTGTGCTAACTGTTCCAGGCTACAGTCACGGCTaGCTTTTGATTGTCCAGGACAGAACTCAGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAVLTVPGYSHG*LLIVQDRTQCG Trigger: CCCACACTGAGTTCTGTCCTGGACAATCAAAAGCAAGCCGTGACTGTAGCCTGGAACAGTTAGCACAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCCTTCCTGTTGACCACTGTCTTGCAAAAAGTGCAGAAAGGGCGGTGGCAGAACAGCTGCCTGTaGAAGTTTGTAAACAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: CWAFLLTTVLQKVQKGRWQNSCL*KFVNRR Trigger: GCGTCTGTTTACAAACTTTCACAGGCAGCTGTTCTG...CCACCGCCCTTTCTGCACTTTTTGCAAGACAGTGGTCAACAGGAAGGCCCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGTTCTCCAGCTGGGCAGTGGTGGGGTCTTGTAGGCTCTACAGAGAGATCTTTTCCACTTTGTTCTaGAAGCCCCACCACTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQFSSWAVVGSCRLYREIFSTLF*KPHHLN Trigger: GTTCAAGTGGTGGGGCTTGCAGAACAAAGTGGAAAA...GATCTCTCTGTAGAGCCTACAAGACCCCACCACTGCCCAGCTGGAGAACTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGTCAGGGGTCTGAAGCCAATTCAGGGCGCCTTCTaGGGCCAGCATTCGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEHANKRLLGAEVRGLKPIQGAF*GQHSNK Trigger: TTTGTTCGAATGCTGGCCCCAGAAGGCGCCCTGAAT...TGGCTTCAGACCCCTGACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAGAATGTGGAAGGATACACACATGCCCACAGCAGTGACCCTGACCTGCTGGGTGCCAAGGTCTaGCTTGTGCCAGGTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKNVEGYTHAHSSDPDLLGAKV*LVPGFN Trigger: ATTGAAACCTGGCACAAGCCAGACCTTGGCACCCAG...CAGGTCAGGGTCACTGCTGTGGGCATGTGTGTATCCTTCCACATTCTTCCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCCTTCCTGTTGACCACTGTCTTGCAAAAAGTGCAGAAAGGGCGGTGGGGCAGTCTTTCTGATTaGCAAGTTCTTGCTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CWAFLLTTVLQKVQKGRWGSLSD*QVLASN Trigger: ATTGGAAGCAAGAACTTGTCAATCAGAAAGACTGCC...CCACCGCCCTTTCTGCACTTTTTGCAAGACAGTGGTCAACAGGAAGGCCCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGTCAGGGGTCTGAAGCCATGCTGGGTCTTCCTCTaGCTTGTAATCCTTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEHANKRLLGAEVRGLKPCWVFL*LVILAK Trigger: CTTAGCAAGGATTACAAGGCAGAGGAAGACCCAGCA...TGGCTTCAGACCCCTGACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCAATTCAGGGCGCCTTCTaGGGCCAGCATTCGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSGSRTHRLYNTRRSICSIQGAF*GQHSNK Trigger: TTTGTTCGAATGCTGGCCCCAGAAGGCGCCCTGAAT...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCACTGGGTGCCAAGGTCTaGCTTGTGCCAGGTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGSRTHRLYNTRRSICSLGAKV*LVPGFN Trigger: ATTGAAACCTGGCACAAGCCAGACCTTGGCACCCAG...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAAGCCACATTCCTATTGTGAGGAGCTGGGGGTAGGTGTCTCTGTATTTTTATGCACATTCTCCTaGGTGCCAAGGTCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKPHSYCEELGVGVSVFLCTFS*VPRSGL Trigger: CAAGCCAGACCTTGGCACCCAGGAGAATGTGCATAA...AAATACAGAGACACCTACCCCCAGCTCCTCACAATAGGAATGTGGCTTCAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTGAAGCCACATTCCTATTGTGAGGAGCTGGGGGTAGGTGTCTCTGTATTTCAGAACAGCTGCCTGTaGAAGTTTGTAAACAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKPHSYCEELGVGVSVFQNSCL*KFVNRR Trigger: GCGTCTGTTTACAAACTTTCACAGGCAGCTGTTCTG...AAATACAGAGACACCTACCCCCAGCTCCTCACAATAGGAATGTGGCTTCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCAGAAATCTTGTGTGTGTACTaGCCTTTCTCGCCATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLGKCQVTQFYPTLPPEILCVY*PFSPSS Trigger: GGACGATGGCGAGAAAGGCCAGTACACACACAAGAT...TTCTGGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| 3UTR CAA 72 bp | ACACATATATGGGCAGTCTTTCTGATTGACAAGTTCTaGCTTCCAATTCGGGCCCAAAGGTCCGCGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: THIWAVFLIDKF*LPIRAQRSASC Trigger: ACAGGACGCGGACCTTTGGGCCCGAATTGGAAGCAAGAACTTGTCAATCAGAAAGACTGCCCATATATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
||
| CDS-3UTR GCA 90 bp | AATTCTATCCCACTCTCCCACCAGAAAGGCATCCTCAGTTTCTGCCCATCTAGATGCTGGGTCTTCCTCTaGCTTGTAATCCTTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSIPLSHQKGILSFCPSRCWVFL*LVILAK Trigger: CTTAGCAAGGATTACAAGGCAGAGGAAGACCCAGCA...TCTAGATGGGCAGAAACTGAGGATGCCTTTCTGGTGGGAGAGTGGGATAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCACAATGTATCTTGTGTGTGTACTaGCCTTTCTCGCCATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRTHRLYNTRRSICSQCILCVY*PFSPSS Trigger: GGACGATGGCGAGAAAGGCCAGTACACACACAAGAT...ACATTGTGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTGAGGAGACTAATACCTTGAAAGGTGTCAGTAACCAGACATCTCCTGGTCAGAACAGCTGCCTGTaGAAGTTTGTAAACAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: QGEETNTLKGVSNQTSPGQNSCL*KFVNRR Trigger: GCGTCTGTTTACAAACTTTCACAGGCAGCTGTTCTG...ACCAGGAGATGTCTGGTTACTGACACCTTTCAAGGTATTAGTCTCCTCACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCACAATGTTGCTGGGTCTTCCTCTaGCTTGTAATCCTTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRTHRLYNTRRSICSQCCWVFL*LVILAK Trigger: CTTAGCAAGGATTACAAGGCAGAGGAAGACCCAGCA...ACATTGTGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGTCAGGGGTCTGAAGCCAGACAGATTTAAATTTTaGTGGGTCTTCCTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LEHANKRLLGAEVRGLKPDRFKF*WVFLCL Trigger: AAGGCAGAGGAAGACCCAGCAAAATTTAAATCTGTC...TGGCTTCAGACCCCTGACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCATTTTCCACTTTGTTCTaGAAGCCCCACCACTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GSGSRTHRLYNTRRSICSFSTLF*KPHHLN Trigger: GTTCAAGTGGTGGGGCTTGCAGAACAAAGTGGAAAA...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CCA 90 bp | GTCTCTTCTTCCATCCTCCGAATGTCATCCATAGTCAGATCAACCCATTTATCGATCTTGTGTGTGTACTaGCCTTTCTCGCCATCGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSSSILRMSSIVRSTHLSILCVY*PFSPSS Trigger: GGACGATGGCGAGAAAGGCCAGTACACACACAAGAT...CGATAAATGGGTTGATCTGACTATGGATGACATTCGGAGGATGGAAGAAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| CDS-3UTR TCA 90 bp | AATTCTATCCCACTCTCCCACCAGAAAGGCATCCTCAGTTTCTGCCCATCTAGAGGCAGTCTTTCTGATTaGCAAGTTCTTGCTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: NSIPLSHQKGILSFCPSRGSLSD*QVLASN Trigger: ATTGGAAGCAAGAACTTGTCAATCAGAAAGACTGCC...TCTAGATGGGCAGAAACTGAGGATGCCTTTCTGGTGGGAGAGTGGGATAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCAGAATATGGGCAGTCTTTCTaGTTGACAAGTTCTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RRLGKCQVTQFYPTLPPEYGQSF*LTSSCF Trigger: GAAGCAAGAACTTGTCAATCAGAAAGACTGCCCATA...TTCTGGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR TCA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCATATGGGCAGTCTTTCTaGTTGACAAGTTCTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSGSRTHRLYNTRRSICSYGQSF*LTSSCF Trigger: GAAGCAAGAACTTGTCAATCAGAAAGACTGCCCATA...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | GGATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCACCAAGGTCTGGCTTGTaGCAGGTTTCAATTTTAATC | + |
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Preference number: 4 (lower is better) Translates to: GSGSRTHRLYNTRRSICSPRSGL*QVSILI Trigger: GATTAAAATTGAAACCTGGCACAAGCCAGACCTTGG...TGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CCA 90 bp | AGTGAATATTCAGCATTGCCAAAGATCTGCCCAGGAAGCAAAATAGCTCAGTTTCTGGGTGCCAAGGTCTaGCTTGTGCCAGGTTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SEYSALPKICPGSKIAQFLGAKV*LVPGFN Trigger: ATTGAAACCTGGCACAAGCCAGACCTTGGCACCCAG...AAACTGAGCTATTTTGCTTCCTGGGCAGATCTTTGGCAATGCTGAATATTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR TCA 90 bp | CAAGGTGAGGAGACTAATACCTTGAAAGGTGTCAGTAACCAGACATCTCCTGGTGGCAGTCTTTCTGATTaGCAAGTTCTTGCTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: QGEETNTLKGVSNQTSPGGSLSD*QVLASN Trigger: ATTGGAAGCAAGAACTTGTCAATCAGAAAGACTGCC...ACCAGGAGATGTCTGGTTACTGACACCTTTCAAGGTATTAGTCTCCTCACCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | AGAAAGGCATCCTCAGTTTCTGCCCATCTAGAAAAGCCAGTGCTTTGCAGCTTCGACAGATTTAAATTTTaGTGGGTCTTCCTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RKASSVSAHLEKPVLCSFDRFKF*WVFLCL Trigger: AAGGCAGAGGAAGACCCAGCAAAATTTAAATCTGTC...GAAGCTGCAAAGCACTGGCTTTTCTAGATGGGCAGAAACTGAGGATGCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGTCAGGGGTCTGAAGCCAAACAGACGCTTCTCTTaGTTATGTATAAAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHANKRLLGAEVRGLKPNRRFS*LCIKFS Trigger: GGAAAACTTTATACATAAGCAAGAGAAGCGTCTGTT...TGGCTTCAGACCCCTGACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CCA 90 bp | AGTGAATATTCAGCATTGCCAAAGATCTGCCCAGGAAGCAAAATAGCTCAGTTTATCTTGTGTGTGTACTaGCCTTTCTCGCCATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEYSALPKICPGSKIAQFILCVY*PFSPSS Trigger: GGACGATGGCGAGAAAGGCCAGTACACACACAAGAT...AAACTGAGCTATTTTGCTTCCTGGGCAGATCTTTGGCAATGCTGAATATTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CCA 90 bp | TTTTGCTGGGTCTTCCTCTGCCTTGTAATCCTTGCTAAGTACTTGGCTTCGATCGCATTCGAACAAAGGTaGGTACTTTGCTCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FCWVFLCLVILAKYLASIAFEQR*VLCSVS Trigger: ACTTACAGAGCAAAGTACCCACCTTTGTTCGAATGC...GATCGAAGCCAAGTACTTAGCAAGGATTACAAGGCAGAGGAAGACCCAGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR CAA 72 bp | TGCCTAAAGACTCTACAAGGTGAGGAGACTAATACCTaGAAAGGTGTCAGTAACCAGACATCTCCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLKTLQGEETNT*KGVSNQTSPGL Trigger: AAGACCAGGAGATGTCTGGTTACTGACACCTTTCAAGGTATTAGTCTCCTCACCTTGTAGAGTCTTTAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | AAAACAAGGAGAACGATCCATCCTACTTCTCACTCCCCTAGTAGAGATTTGGTCCCAAGGTCTGGCTTGTaGCAGGTTTCAATTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KTRRTIHPTSHSPSRDLVPRSGL*QVSILI Trigger: GATTAAAATTGAAACCTGGCACAAGCCAGACCTTGG...GACCAAATCTCTACTAGGGGAGTGAGAAGTAGGATGGATCGTTCTCCTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR CCA 90 bp | GATCAGGCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCACAGATTTAAATTTTGCTaGGTCTTCCTCTGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DQAPAHTGFIIPDGLFVHRFKFC*VFLCLV Trigger: TACAAGGCAGAGGAAGACCCAGCAAAATTTAAATCT...GTGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGCCTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCAGAAAGATTTAAATTTTGCTaGGTCTTCCTCTGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRLGKCQVTQFYPTLPPERFKFC*VFLCLV Trigger: TACAAGGCAGAGGAAGACCCAGCAAAATTTAAATCT...TTCTGGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | AGAAGGCTTGGGAAATGTCAGGTGACACAATTCTATCCCACTCTCCCACCAGAAAACAGACGCTTCTCTTaGTTATGTATAAAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLGKCQVTQFYPTLPPENRRFS*LCIKFS Trigger: GGAAAACTTTATACATAAGCAAGAGAAGCGTCTGTT...TTCTGGTGGGAGAGTGGGATAGAATTGTGTCACCTGACATTTCCCAAGCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | AGTGAATATTCAGCATTGCCAAAGATCTGCCCAGGAAGCAAAATAGCTCAGTTTGACAGATTTAAATTTTaGTGGGTCTTCCTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEYSALPKICPGSKIAQFDRFKF*WVFLCL Trigger: AAGGCAGAGGAAGACCCAGCAAAATTTAAATCTGTC...AAACTGAGCTATTTTGCTTCCTGGGCAGATCTTTGGCAATGCTGAATATTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR GCA 90 bp | GCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCACAATGTTAACAGACGCTTCTCTTaGTTATGTATAAAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: APAHTGFIIPDGLFVHNVNRRFS*LCIKFS Trigger: GGAAAACTTTATACATAAGCAAGAGAAGCGTCTGTT...AACATTGTGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| 3UTR CAA 72 bp | ATAAAGTTTTCCACTTTGTTCTGCAAGCCCCACCACTaGAACTTGACAGTAACCAGTTTGTATGCACACATA | + |
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Preference number: 4 (lower is better) Translates to: IKFSTLFCKPHH*NLTVTSLYAHI Trigger: TATGTGTGCATACAAACTGGTTACTGTCAAGTTCAAGTGGTGGGGCTTGCAGAACAAAGTGGAAAACTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| 3UTR CAA 72 bp | TCTTGTCCAGTGATTAGAAACAGGAAGGTACATGTTTaGCTAGGGATAAAAAGCTTTTTGCATGCTTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCPVIRNRKVHV*LGIKSFLHACL Trigger: CAAACAAGCATGCAAAAAGCTTTTTATCCCTAGCAAAACATGTACCTTCCTGTTTCTAATCACTGGACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | GGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCCCCCACCACTTGAACTaGACAGTAACCAGTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GCVRRWPATQEGGAAGPSPHHLN*TVTSLY Trigger: ATACAAACTGGTTACTGTCAAGTTCAAGTGGTGGGG...GGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | GGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGGGCCTTCCCTTTCATGTACTCATTaGCACTCACGGTTCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GCVRRWPATQEGGAAGPSLSCTH*HSRFCS Trigger: ACTGCAGAACCGTGAGTGCAAATGAGTACATGAAAG...GGAAGGCCCAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179445.8 |
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| CDS-3UTR CAA 90 bp | GCCAGTGCTTTGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTGATACAGCTGCCCCACTaGATACTCATCTACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: ASALQLPLPWSLGFPSLLIQLPH*ILIYRH Trigger: GTGTCTGTAGATGAGTATCAAGTGGGGCAGCTGTAT...CAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | GCCAGTGCTTTGCAGCTTCCACTCCCTTGGAGCCTGGGCTTCCCCAGCCTGCTGGTGCCAAGGTCTGGCTaGTGCCAGGTTTCAATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASALQLPLPWSLGFPSLLVPRSG*CQVSIL Trigger: TAAAATTGAAACCTGGCACAAGCCAGACCTTGGCAC...CAGCAGGCTGGGGAAGCCCAGGCTCCAAGGGAGTGGAAGCTGCAAAGCACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | CACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGAGCTGCTGATACAGCTGCCCCACTaGATACTCATCTACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: HRKAASEDGLPLRRVELLIQLPH*ILIYRH Trigger: GTGTCTGTAGATGAGTATCAAGTGGGGCAGCTGTAT...CAGCAGCTCCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | AGAATGAGCACAGAAAGGCTGCGTCCGAAGATGGCCTGCCACTCAGGAGGGTGGTGCAAGCCCCACCACTaGAACTTGACAGTAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RMSTERLRPKMACHSGGWCKPHH*NLTVTS Trigger: ACTGGTTACTGTCAAGTTCAAGTGGTGGGGCTTGCA...CCACCCTCCTGAGTGGCAGGCCATCTTCGGACGCAGCCTTTCTGTGCTCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | TTAGAGCACGCAAACAAGAGGTTACTAGGAGCAGAGGTCAGGGGTCTGAAGCCATGCAAGCCCCACCACTaGAACTTGACAGTAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LEHANKRLLGAEVRGLKPCKPHH*NLTVTS Trigger: ACTGGTTACTGTCAAGTTCAAGTGGTGGGGCTTGCA...TGGCTTCAGACCCCTGACCTCTGCTCCTAGTAACCTCTTGTTTGCGTGCTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | GGTCTGAAGCCACATTCCTATTGTGAGGAGCTGGGGGTAGGTGTCTCTGTATTTATACAGCTGCCCCACTaGATACTCATCTACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GLKPHSYCEELGVGVSVFIQLPH*ILIYRH Trigger: GTGTCTGTAGATGAGTATCAAGTGGGGCAGCTGTAT...AAATACAGAGACACCTACCCCCAGCTCCTCACAATAGGAATGTGGCTTCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | AATTCTATCCCACTCTCCCACCAGAAAGGCATCCTCAGTTTCTGCCCATCTAGATGCAAGCCCCACCACTaGAACTTGACAGTAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NSIPLSHQKGILSFCPSRCKPHH*NLTVTS Trigger: ACTGGTTACTGTCAAGTTCAAGTGGTGGGGCTTGCA...TCTAGATGGGCAGAAACTGAGGATGCCTTTCTGGTGGGAGAGTGGGATAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143219.8 ENSMUST00000179521.8 |
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| CDS GCA 90 bp | GCTTCGATCAGCGATGTCTATATATATAGCTTCCACATGTTTCCATaGCTCAGGCTCCAGTTTATGCACATTCTCCTGGGTGCCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASISDVYIYSFHMFP*LRLQFMHILLGAKV Trigger: GACCTTGGCACCCAGGAGAATGTGCATAAACTGGAGCCTGAGGCATGGAAACATGTGGAAGCTATATATATAGACATCGCTGATCGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | GCTCCCGCACACACAGGCTTTATAATACCAGACGGTCTATTTGTTCACAATGTTCCCCACCACTTGAACTaGACAGTAACCAGTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: APAHTGFIIPDGLFVHNVPHHLN*TVTSLY Trigger: ATACAAACTGGTTACTGTCAAGTTCAAGTGGTGGGG...AACATTGTGAACAAATAGACCGTCTGGTATTATAAAGCCTGTGTGTGCGGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS-3UTR CAA 90 bp | TTTAAATTTTGCTGGGTCTTCCTCTGCCTTGTAATCCTTGCTAAGTACTTGGCTATACAGCTGCCCCACTaGATACTCATCTACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: FKFCWVFLCLVILAKYLAIQLPH*ILIYRH Trigger: GTGTCTGTAGATGAGTATCAAGTGGGGCAGCTGTAT...AGCCAAGTACTTAGCAAGGATTACAAGGCAGAGGAAGACCCAGCAAAATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102509.11 |
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| CDS CCA 72 bp | TCAGGGCGCCTTCTGGGGCCAGCATTCGAACAAAGGTaGGTACTTTGCTCTGTAAGTGGTAGATCTTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SGRLLGPAFEQR*VLCSVSGRSCV Trigger: CACACAAGATCTACCACTTACAGAGCAAAGTACCCACCTTTGTTCGAATGCTGGCCCCAGAAGGCGCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS CCA 72 bp | ATTCCAGGCTTTCTCGTGTATATTCAGGGCGCCTTCTaGGGCCAGCATTCGAACAAAGGTGGGTACTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IPGFLVYIQGAF*GQHSNKGGYFA Trigger: AGCAAAGTACCCACCTTTGTTCGAATGCTGGCCCCAGAAGGCGCCCTGAATATACACGAGAAAGCCTGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102509.11 ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS GCA 72 bp | AGCGATGTCTATATATATAGCTTCCACATGTTTCCATaGCTCAGGCTCCAGTTTATGCACATTCTCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SDVYIYSFHMFP*LRLQFMHILLG Trigger: ACCCAGGAGAATGTGCATAAACTGGAGCCTGAGGCATGGAAACATGTGGAAGCTATATATATAGACATCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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| CDS CCA 72 bp | CTCCAGTTTATGCACATTCTCCTGGGTGCCAAGGTCTaGCTTGTGCCAGGTTTCAATTTTAATCAGAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: LQFMHILLGAKV*LVPGFNFNQKI Trigger: GATTTTCTGATTAAAATTGAAACCTGGCACAAGCCAGACCTTGGCACCCAGGAGAATGTGCATAAACTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143219.8 ENSMUST00000179445.8 ENSMUST00000179521.8 |
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