Pregenerated sensors for PISD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023452Ensembl transcript IDs: ENSMUST00000061895.16, ENSMUST00000071829.12, ENSMUST00000120591.8, ENSMUST00000135248.2, ENSMUST00000142779.8, ENSMUST00000142957.6, ENSMUST00000197787.5, ENSMUST00000200390.5, ENSMUST00000202283.5
Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATACGGGCCGTGCCTGAGGCTTCAGCTTACGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCAGGTCCTCCACTGCAGCCTCAGTCA | + |
Preference number: 1 (lower is better) Translates to: IRAVPEASAYAGRTR*GCGSGAGPPLQPQS Trigger: TGACTGAGGCTGCAGTGGAGGACCTGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGCGTAAGCTGAAGCCTCAGGCACGGCCCGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR CCA 90 bp | GGTTCACTGACATCAGGGAACCTGGGAAGTGGCGCCGATGTGAGATaGTCCAGTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGG | + |
Preference number: 1 (lower is better) Translates to: GSLTSGNLGSGADVR*SSQWGSGSSGSLLG Trigger: CCCCAGGAGACTACCACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGGTTCCCTGATGTCAGTGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 ENSMUST00000202283.5 |
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3UTR GCA 90 bp | GCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTaGCTCGAAGATGAGCACGATGGTGGAGCCCAGGTTGAACTCCCC | + |
Preference number: 1 (lower is better) Translates to: ADLLPCLQPEVEVLG*LEDEHDGGAQVELP Trigger: GGGGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 90 bp | CAATCTTATAAGGTCAGCCCCGCAGTGCCCCTCACCCAGACAGCCTaGGGCTCCGCTGAAGACCCTCATGCTCCTGTGTGGAAAGATCCT | + |
Preference number: 1 (lower is better) Translates to: QSYKVSPAVPLTQTA*GSAEDPHAPVWKDP Trigger: AGGATCTTTCCACACAGGAGCATGAGGGTCTTCAGCGGAGCCTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 90 bp | CACCTCAGAGTTCTTCACCTGCCCAAAGGTGAGGATCTTGCCATCTaGTGGGCTGGTCACACAGTGCAAGCCACATACGGGCCGTGCCTG | + |
Preference number: 1 (lower is better) Translates to: HLRVLHLPKGEDLAI*WAGHTVQATYGPCL Trigger: CAGGCACGGCCCGTATGTGGCTTGCACTGTGTGACCAGCCCATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR GCA 90 bp | GGACTAGAGGGAGCCCAGTGCTTCCCCAAAGCGGATCTTCTGCCCTaGCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCTCGAAGATGAG | + |
Preference number: 1 (lower is better) Translates to: GLEGAQCFPKADLLP*LQPEVEVLGCLEDE Trigger: CTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 90 bp | GGCTGTAGACTGGCCTCCGGAGCCAGTAAGGAAGTTCTACTTGGTTaGGGCGACCACAGGCACGTGACAGCAAACGCGTTGGCACAGATT | + |
Preference number: 1 (lower is better) Translates to: GCRLASGASKEVLLG*GDHRHVTANALAQI Trigger: AATCTGTGCCAACGCGTTTGCTGTCACGTGCCTGTGGTCGCCTCAACCAAGTAGAACTTCCTTACTGGCTCCGGAGGCCAGTCTACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR GCA 90 bp | AAGATCCTTTGGCAGCCACAACCGAGAGGACTAGAGGGAGCCCAGTaGTTCCCCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTT | + |
Preference number: 1 (lower is better) Translates to: KILWQPQPRGLEGAQ*FPKADLLPCLQPEV Trigger: AACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCCTCTCGGTTGTGGCTGCCAAAGGATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR GCA 90 bp | CCGGAAGAACTCGCTGAGGTTGCGGTAGTGGTGCAGGTCCTCCACTaGAGCCTCAGTCATGTTCACCCCAAAGGTCCAGATATACAGGCT | + |
Preference number: 1 (lower is better) Translates to: PEELAEVAVVVQVLH*SLSHVHPKGPDIQA Trigger: AGCCTGTATATCTGGACCTTTGGGGTGAACATGACTGAGGCTGCAGTGGAGGACCTGCACCACTACCGCAACCTCAGCGAGTTCTTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 |
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3UTR CCA 90 bp | ACTCCCCCAGGGGCTCACCCTTGCGCATGGGAATGCCCTCCTTGTTaGCATGTGTTACAAAGCTCAGGTCATTGTAGGAGCCCTTGCTGT | + |
Preference number: 1 (lower is better) Translates to: TPPGAHPCAWECPPC*HVLQSSGHCRSPCC Trigger: ACAGCAAGGGCTCCTACAATGACCTGAGCTTTGTAACACATGCCAACAAGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR CCA 90 bp | CAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTaGATCCACAGTCTGTGCCCAGCAGGCACCTCACCCTGTGCACAT | + |
Preference number: 1 (lower is better) Translates to: QKAVMKAMWPALGRQ*IHSLCPAGTSPCAH Trigger: ATGTGCACAGGGTGAGGTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CCA 90 bp | CAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTaGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCA | + |
Preference number: 1 (lower is better) Translates to: QTGEIGEQKAVMKAM*PALGRQWIHSLCPA Trigger: TGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 90 bp | GAGCCAGTAAGGAAGTTCTACTTGGTTGAGGCGACCACAGGCACGTaGCAGCAAACGCGTTGGCACAGATTTATACAGGGACACCTCCCA | + |
Preference number: 1 (lower is better) Translates to: EPVRKFYLVEATTGT*QQTRWHRFIQGHLP Trigger: TGGGAGGTGTCCCTGTATAAATCTGTGCCAACGCGTTTGCTGTCACGTGCCTGTGGTCGCCTCAACCAAGTAGAACTTCCTTACTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR CCA 90 bp | CTCAGTCATGTTCACCCCAAAGGTCCAGATATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGGAAGTTCTACTTGGTTGAGGCGACC | + |
Preference number: 1 (lower is better) Translates to: LSHVHPKGPDIQAVD*PPEPVRKFYLVEAT Trigger: GGTCGCCTCAACCAAGTAGAACTTCCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTATATCTGGACCTTTGGGGTGAACATGACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR GCA 90 bp | CCTTGTTGGCATGTGTTACAAAGCTCAGGTCATTGTAGGAGCCCTTaGTGTACCTGGGGCTGTTTGTGTGCAGGTCTCGGTCAAAGTGGA | + |
Preference number: 1 (lower is better) Translates to: PCWHVLQSSGHCRSP*CTWGCLCAGLGQSG Trigger: TCCACTTTGACCGAGACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCTCCTACAATGACCTGAGCTTTGTAACACATGCCAACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR CCA 90 bp | TCCTGCAGGAGAAATTCATGGCATTCCCAAGATCGACATGAACTCTaGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGT | + |
Preference number: 1 (lower is better) Translates to: SCRRNSWHSQDRHEL*SCPYHWVPHGLHTC Trigger: ACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATGCCATGAATTTCTCCTGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 90 bp | AGTCTCCAGTTAGGACTACACGCTCATTGTGACAAAAGAGCTCTTTaGTCCATCGGGCCATGCCAGGGTTCACTGACATCAGGGAACCTG | + |
Preference number: 1 (lower is better) Translates to: SLQLGLHAHCDKRAL*SIGPCQGSLTSGNL Trigger: CAGGTTCCCTGATGTCAGTGAACCCTGGCATGGCCCGATGGATCAAAGAGCTCTTTTGTCACAATGAGCGTGTAGTCCTAACTGGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 ENSMUST00000202283.5 |
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3UTR CCA 90 bp | CCTGCCCTTTCACTCCAGACTCTACCAGACAAGCCAGTAATTAATTaGTTTTGCCTACCAGCAAAAGGATTCAGCCAGCTTCTTAGAGCC | + |
Preference number: 1 (lower is better) Translates to: PALSLQTLPDKPVIN*FCLPAKGFSQLLRA Trigger: GGCTCTAAGAAGCTGGCTGAATCCTTTTGCTGGTAGGCAAAACCAATTAATTACTGGCTTGTCTGGTAGAGTCTGGAGTGAAAGGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR GCA 90 bp | CTTTCACTCCAGACTCTACCAGACAAGCCAGTAATTAATTGGTTTTaGCTACCAGCAAAAGGATTCAGCCAGCTTCTTAGAGCCTACAAA | + |
Preference number: 1 (lower is better) Translates to: LSLQTLPDKPVINWF*LPAKGFSQLLRAYK Trigger: TTTGTAGGCTCTAAGAAGCTGGCTGAATCCTTTTGCTGGTAGGCAAAACCAATTAATTACTGGCTTGTCTGGTAGAGTCTGGAGTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CCA 90 bp | ATACAGTTGAAAAAGTTAAGTGATTTCTCCTGCAGGAGAAATTCATaGCATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCAC | + |
Preference number: 1 (lower is better) Translates to: IQLKKLSDFSCRRNS*HSQDRHELWSCPYH Trigger: GTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATGCCATGAATTTCTCCTGCAGGAGAAATCACTTAACTTTTTCAACTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CAA 90 bp | AGCACGATGGTGGAGCCCAGGTTGAACTCCCCCAGGGGCTCACCCTaGCGCATGGGAATGCCCTCGGATAGAGCCCACATTGGTGGCTCC | + |
Preference number: 2 (lower is better) Translates to: STMVEPRLNSPRGSP*RMGMPSDRAHIGGS Trigger: GGAGCCACCAATGTGGGCTCTATCCGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | GTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGTGGGTGCCTCGAAGATaGGCACGATGGTGGAGCCCA | + |
Preference number: 2 (lower is better) Translates to: VPSRHLTLCTLREPCDGRWVPRR*ARWWSP Trigger: TGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCA...CCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | GCAGCCACAACCGAGAGGACTAGAGGGAGCCCAGTGCTTCCCCAAAGCGGATCTCATACGGGCCGTGCCTaGGGCTTCAGCTTACGCCGG | + |
Preference number: 2 (lower is better) Translates to: AATTERTRGSPVLPQSGSHTGRA*GFSLRR Trigger: CCGGCGTAAGCTGAAGCCTCAGGCACGGCCCGTATG...AGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCCTCTCGGTTGTGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR GCA 90 bp | GCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCAGGTCAGCCCCGCAGTaGCCCTCACCCAGACAGCCT | + |
Preference number: 2 (lower is better) Translates to: AMWPALGRQWIHSLCPAGRSAPQ*PSPRQP Trigger: AGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCT...GCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CAA 90 bp | AAGTCCTTGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCACCCTTGCGCATGGGAATGCCCTCC | + |
Preference number: 2 (lower is better) Translates to: KSLGASKMSTMVEPR*NSPRGSPLRMGMPS Trigger: GGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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3UTR CAA 90 bp | AAGTCCTTGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCACCCTTGCGCATGGGAATGCCCTCG | + |
Preference number: 2 (lower is better) Translates to: KSLGASKMSTMVEPR*NSPRGSPLRMGMPS Trigger: CGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | GGAGTGGAAGCAGTGGTAGTCTCCTGGGGCCAGGTAGATGACACAGTGGTACAGAGGTCAGCCCCGCAGTaGCCCTCACCCAGACAGCCT | + |
Preference number: 2 (lower is better) Translates to: GVEAVVVSWGQVDDTVVQRSAPQ*PSPRQP Trigger: AGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCT...CTGTACCACTGTGTCATCTACCTGGCCCCAGGAGACTACCACTGCTTCCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | GTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGGCCAGGTAGATGACACAGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCA | + |
Preference number: 2 (lower is better) Translates to: VSGGVEAVVVSWGQVDDTAGRTR*GCGSGA Trigger: TGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGC...TGTGTCATCTACCTGGCCCCAGGAGACTACCACTGCTTCCACTCCCCCACTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 |
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3UTR-3UTR GCA 90 bp | ACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGACCCAGAACCAGGTCAGCCCCGCAGTaGCCCTCACCCAGACAGCCT | + |
Preference number: 2 (lower is better) Translates to: THPYSEKGSRSCPERPRTRSAPQ*PSPRQP Trigger: AGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCT...GGTTCTGGGTCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | CTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGAGGTCAGCCCCGCAGTaGCCCTCACCCAGACAGCCT | + |
Preference number: 2 (lower is better) Translates to: LVLSLPLGSPWPAYLFSRRSAPQ*PSPRQP Trigger: AGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCT...CCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CAA 90 bp | AGCACGATGGTGGAGCCCAGGTTGAACTCCCCCAGGGGCTCACCCTaGCGCATGGGAATGCCCTCCTTGTTGGCATGTGTTACAAAGCTC | + |
Preference number: 2 (lower is better) Translates to: STMVEPRLNSPRGSP*RMGMPSLLACVTKL Trigger: GAGCTTTGTAACACATGCCAACAAGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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3UTR CAA 90 bp | GGGGCTCACCCTTGCGCATGGGAATGCCCTCGGATAGAGCCCACATaGGTGGCTCCCACTGCTGTCAACGAGAAGAACCCATGTTTCCAG | + |
Preference number: 2 (lower is better) Translates to: GAHPCAWECPRIEPT*VAPTAVNEKNPCFQ Trigger: CTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGGAGCCACCAATGTGGGCTCTATCCGAGGGCATTCCCATGCGCAAGGGTGAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | ATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATATGGTGGAGCCCAGGTTaGACTCCCCCAGGGGCTCAC | + |
Preference number: 2 (lower is better) Translates to: IDMNSGLVPTTGFPMACIWWSPG*TPPGAH Trigger: GTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCA...TATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | CCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCAGGGACACCTCCCAGTaGCTAGCAAGTTTGGGCGGG | + |
Preference number: 2 (lower is better) Translates to: PKRIFCPAFSLKLKSLGARDTSQ*LASLGG Trigger: CCCGCCCAAACTTGCTAGTCACTGGGAGGTGTCCCT...GGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR TCA 90 bp | TCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCGCGACCACAGGCACGTaGCAGCAAACGCGTTGGCAC | + |
Preference number: 2 (lower is better) Translates to: SQDRHELWSCPYHWVPHGATTGT*QQTRWH Trigger: GTGCCAACGCGTTTGCTGTCACGTGCCTGTGGTCGC...GCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR GCA 90 bp | GTAGATGACACAGTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGGTTTCTCCAGGGGCTCACCCTTaGGCATGGGAATGCCCTCGG | + |
Preference number: 2 (lower is better) Translates to: VDDTVVQLIPFPGDQLVSPGAHP*AWECPR Trigger: CCGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGG...AGAAACCAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCACTGTGTCATCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
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3UTR CAA 90 bp | AGTGCTTCCCCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTaGAAGTCCTTGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCC | + |
Preference number: 2 (lower is better) Translates to: SASPKRIFCPAFSLK*KSLGASKMSTMVEP Trigger: GGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGGGGAAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | TCTTTGATCCATCGGGCCATGCCAGGGTTCACTGACATCAGGGAACCTGGGAAGTGGGTGCCTCGAAGATaGGCACGATGGTGGAGCCCA | + |
Preference number: 2 (lower is better) Translates to: SLIHRAMPGFTDIREPGKWVPRR*ARWWSP Trigger: TGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCA...CTTCCCAGGTTCCCTGATGTCAGTGAACCCTGGCATGGCCCGATGGATCAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | GAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTCACCCAGACAGCCTaGGGCTCCGCTGAAGACCCT | + |
Preference number: 2 (lower is better) Translates to: ELWSCPYHWVPHGLHTCFLTQTA*GSAEDP Trigger: AGGGTCTTCAGCGGAGCCTCAGGCTGTCTGGGTGAG...AAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | CTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTACTCACCCAGACAGCCTaGGGCTCCGCTGAAGACCCT | + |
Preference number: 2 (lower is better) Translates to: LWSCPYHWVPHGLHTCFLLTQTA*GSAEDP Trigger: AGGGTCTTCAGCGGAGCCTCAGGCTGTCTGGGTGAG...TAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | CTGTACCTGGGGCTGTTTGTGTGCAGGTCTCGGTCAAAGTGGATACGGATAGAGCTCACCCAGACAGCCTaGGGCTCCGCTGAAGACCCT | + |
Preference number: 2 (lower is better) Translates to: LYLGLFVCRSRSKWIRIELTQTA*GSAEDP Trigger: AGGGTCTTCAGCGGAGCCTCAGGCTGTCTGGGTGAG...CTCTATCCGTATCCACTTTGACCGAGACCTGCACACAAACAGCCCCAGGTACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR GCA 90 bp | CTAGAGGGTGTGGTAGTACACAGCCAGGAGTTAGGGGTGGGAGGCTCTGGCTTGCTAGAGGGAGCCCAGTaGTTCCCCAAAGCGGATCTT | + |
Preference number: 2 (lower is better) Translates to: LEGVVVHSQELGVGGSGLLEGAQ*FPKADL Trigger: AAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAG...CAAGCCAGAGCCTCCCACCCCTAACTCCTGGCTGTGTACTACCACACCCTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | GTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGGCCAGGTAGATGACACAGTGCAGGTCCTCCACTaGAGCCTCAGTCATGTTCAC | + |
Preference number: 2 (lower is better) Translates to: VSGGVEAVVVSWGQVDDTVQVLH*SLSHVH Trigger: GTGAACATGACTGAGGCTGCAGTGGAGGACCTGCAC...TGTGTCATCTACCTGGCCCCAGGAGACTACCACTGCTTCCACTCCCCCACTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 |
||
3UTR-3UTR CCA 90 bp | CAGTCTGTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGCTCTAGGAAGACAGTaGATCCACAGTCTGTGCCCA | + |
Preference number: 2 (lower is better) Translates to: QSVPSRHLTLCTLREPCDALGRQ*IHSLCP Trigger: TGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGC...GTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCACAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR CAA 90 bp | CCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTaGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTTGAAC | + |
Preference number: 2 (lower is better) Translates to: PKRIFCPAFSLKLKS*GASKMSTMVEPRLN Trigger: GTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR CAA 90 bp | ACCTGCTCCACCTCAGAGTTCTTCACCTGCCCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTCACACAGTGCAAGCCACATACGGGC | + |
Preference number: 2 (lower is better) Translates to: TCSTSEFFTCPKVRI*PSDGLVTQCKPHTG Trigger: GCCCGTATGTGGCTTGCACTGTGTGACCAGCCCATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGAGGTGGAGCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR TCA 90 bp | GGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGACTCACCCAGACAGCCTaGGGCTCCGCTGAAGACCCT | + |
Preference number: 2 (lower is better) Translates to: GEIGEQKAVMKAMWPALGLTQTA*GSAEDP Trigger: AGGGTCTTCAGCGGAGCCTCAGGCTGTCTGGGTGAG...TCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | ATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGCCAGGGGCTCACCCTTaGGCATGGGAATGCCCTCCT | + |
Preference number: 2 (lower is better) Translates to: IGEQKAVMKAMWPALGRQPGAHP*AWECPP Trigger: AGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGG...CTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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3UTR-3UTR GCA 90 bp | AGAGGACTAGAGGGAGCCCAGTGCTTCCCCAAAGCGGATCTTCTGCCCTGCCTTGTTGAAGTCCTTGGGTaGCTCGAAGATGAGCACGAT | + |
Preference number: 2 (lower is better) Translates to: RGLEGAQCFPKADLLPCLVEVLG*LEDEHD Trigger: ATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAAC...AAGGCAGGGCAGAAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | GTACTGACCTCTATACCCTCTGCCTCCAACACAGTCCCTAGACCAATAGCAGCATGGATCCACAGTCTGTaGCCAGCAGGCACCTCACCC | + |
Preference number: 2 (lower is better) Translates to: VLTSIPSASNTVPRPIAAWIHSL*PAGTSP Trigger: GGGTGAGGTGCCTGCTGGGCACAGACTGTGGATCCA...TGCTGCTATTGGTCTAGGGACTGTGTTGGAGGCAGAGGGTATAGAGGTCAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR-3UTR GCA 90 bp | TCTTTGATCCATCGGGCCATGCCAGGGTTCACTGACATCAGGGAACCTGGGAAGGTGCAGGTCCTCCACTaGAGCCTCAGTCATGTTCAC | + |
Preference number: 2 (lower is better) Translates to: SLIHRAMPGFTDIREPGKVQVLH*SLSHVH Trigger: GTGAACATGACTGAGGCTGCAGTGGAGGACCTGCAC...CTTCCCAGGTTCCCTGATGTCAGTGAACCCTGGCATGGCCCGATGGATCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 |
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3UTR-3UTR CCA 90 bp | CTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGAGCCCTTGCTGTACCTaGGGCTGTTTGTGTGCAGGT | + |
Preference number: 2 (lower is better) Translates to: LVLSLPLGSPWPAYLFSRSPCCT*GCLCAG Trigger: ACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCT...CCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
||
3UTR-3UTR TCA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATATGGTGGAGCCCAGGTTaGACTCCCCCAGGGGCTCAC | + |
Preference number: 2 (lower is better) Translates to: KVYIISHCPQKTLAEPRIWWSPG*TPPGAH Trigger: GTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCA...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | TCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCGCGGATCTTCTGCCCTaGCTTCAGCCTGAAGTTGAA | + |
Preference number: 2 (lower is better) Translates to: SQDRHELWSCPYHWVPHGADLLP*LQPEVE Trigger: TTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGC...GCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | TCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGATCCACAGTCTGTaGCCAGCAGGCACCTCACCC | + |
Preference number: 2 (lower is better) Translates to: SRKQTGEIGEQKAVMKAMWIHSL*PAGTSP Trigger: GGGTGAGGTGCCTGCTGGGCACAGACTGTGGATCCA...CATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | CCAGGGTTCACTGACATCAGGGAACCTGGGAAGTGGCGCCGATGTGAGATGGTCTCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTG | + |
Preference number: 2 (lower is better) Translates to: PGFTDIREPGKWRRCEMVSEFFT*PKVRIL Trigger: CAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGA...GACCATCTCACATCGGCGCCACTTCCCAGGTTCCCTGATGTCAGTGAACCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 |
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3UTR-3UTR CCA 90 bp | CTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGG | + |
Preference number: 2 (lower is better) Translates to: LWSCPYHWVPHGLHTCFLIQAVD*PPEPVR Trigger: CCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTAT...TAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR TCA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCTGGGTGCCTCGAAGATaGGCACGATGGTGGAGCCCA | + |
Preference number: 2 (lower is better) Translates to: PTKVYIISHCPQKTLAEPWVPRR*ARWWSP Trigger: TGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCA...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | ATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACAGAAAGCAGACGGGTaGAATTGGGGAGCAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: IDMNSGLVPTTGFPMACIQKADG*NWGAES Trigger: GCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTG...TATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | TCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCGTTATGAAGGCCATGTaGCCTGCTCTAGGAAGACAG | + |
Preference number: 2 (lower is better) Translates to: SQDRHELWSCPYHWVPHGVMKAM*PALGRQ Trigger: CTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAAC...GCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CAA 90 bp | TTTGTGTGCAGGTCTCGGTCAAAGTGGATACGGATAGAGCCCACATaGGTGGCTCCCACTGCTGTCAACGAGAAGAACCCATGTTTCCAG | + |
Preference number: 2 (lower is better) Translates to: FVCRSRSKWIRIEPT*VAPTAVNEKNPCFQ Trigger: CTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGGAGCCACCAATGTGGGCTCTATCCGTATCCACTTTGACCGAGACCTGCACACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR TCA 90 bp | GGGCCTCCACCTGCCCTTTCACTCCAGACTCTACCAGACAAGCCAGTAATTAATAGCAGAAAGCAGTTATaGAGGCCATGTGGCCTGCTC | + |
Preference number: 2 (lower is better) Translates to: GPPPALSLQTLPDKPVINSRKQL*RPCGLL Trigger: GAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCT...ATTAATTACTGGCTTGTCTGGTAGAGTCTGGAGTGAAAGGGCAGGTGGAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | CATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATAGCAGAAAGCAGTTATaGAGGCCATGTGGCCTGCTC | + |
Preference number: 2 (lower is better) Translates to: HSQDRHELWSCPYHWVPHSRKQL*RPCGLL Trigger: GAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCT...ATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | CATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATCAGAAAGCAGACGGGTaGAATTGGGGAGCAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: HSQDRHELWSCPYHWVPHQKADG*NWGAES Trigger: GCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTG...ATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | GGGCCTCCACCTGCCCTTTCACTCCAGACTCTACCAGACAAGCCAGTAATTAATCAGAAAGCAGACGGGTaGAATTGGGGAGCAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: GPPPALSLQTLPDKPVINQKADG*NWGAES Trigger: GCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTG...ATTAATTACTGGCTTGTCTGGTAGAGTCTGGAGTGAAAGGGCAGGTGGAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | AAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCTCGGAATGCCCTCCTTGTTaGCATGTGTTACAAAGCTCA | + |
Preference number: 2 (lower is better) Translates to: KRIFCPAFSLKLKSLGASECPPC*HVLQSS Trigger: TGAGCTTTGTAACACATGCCAACAAGGAGGGCATTC...CGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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3UTR-3UTR CCA 90 bp | ATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATAGTTATGAAGGCCATGTaGCCTGCTCTAGGAAGACAG | + |
Preference number: 2 (lower is better) Translates to: IDMNSGLVPTTGFPMACIVMKAM*PALGRQ Trigger: CTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAAC...TATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | GAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGATTGAGAGAGCCCTGTaGCGGGAGGGGTCACAGCTA | + |
Preference number: 2 (lower is better) Translates to: EPTKVYIISHCPQKTLAEIERAL*REGSQL Trigger: TAGCTGTGACCCCTCCCGTCACAGGGCTCTCTCAAT...CTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGAGGTCAGCCCCGCAGTaGCCCTCACCCAGACAGCCT | + |
Preference number: 2 (lower is better) Translates to: FLEPTKVYIISHCPQKTLRSAPQ*PSPRQP Trigger: AGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCT...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | TTTTCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCAGCAGAAAGCAGTTATaGAGGCCATGTGGCCTGCTC | + |
Preference number: 2 (lower is better) Translates to: FSRKQTGEIGEQKAVMKASRKQL*RPCGLL Trigger: GAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCT...GGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | TGCAGGAGAAATTCATGGCATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCGCGGATCTTCTGCCCTaGCTTCAGCCTGAAGTTGAA | + |
Preference number: 2 (lower is better) Translates to: CRRNSWHSQDRHELWSCPADLLP*LQPEVE Trigger: TTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGC...GGGACAAGACCAGAGTTCATGTCGATCTTGGGAATGCCATGAATTTCTCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | GAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGAGATGGTCCAGTCAGTaGGGGAGTGGAAGCAGTGGT | + |
Preference number: 2 (lower is better) Translates to: EPTKVYIISHCPQKTLAERWSSQ*GSGSSG Trigger: ACCACTGCTTCCACTCCCCCACTGACTGGACCATCT...CTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGGCAGGGCCTCCACCTaGCCTTTCACTCCAGACTCT | + |
Preference number: 2 (lower is better) Translates to: FLEPTKVYIISHCPQKTLGRAST*PFTPDS Trigger: AGAGTCTGGAGTGAAAGGGCAGGTGGAGGCCCTGCC...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | CACATTGGTGGCTCCCACTGCTGTCAACGAGAAGAACCCATGTTTCCAGTCTCCAGGGGTGGGAGGCTCTaGCTTGTACAAAAATTTAAA | + |
Preference number: 2 (lower is better) Translates to: HIGGSHCCQREEPMFPVSRGGRL*LVQKFK Trigger: TTTAAATTTTTGTACAAGCCAGAGCCTCCCACCCCT...GGAGACTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGGAGCCACCAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | CTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGTTAAGTGATTTCTCCTaGAGGAGAAATTCATGGCAT | + |
Preference number: 2 (lower is better) Translates to: LVLSLPLGSPWPAYLFSRLSDFS*RRNSWH Trigger: ATGCCATGAATTTCTCCTGCAGGAGAAATCACTTAA...CCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | GAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGGTTATGAAGGCCATGTaGCCTGCTCTAGGAAGACAG | + |
Preference number: 2 (lower is better) Translates to: EPTKVYIISHCPQKTLAEVMKAM*PALGRQ Trigger: CTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAAC...CTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR GCA 90 bp | ATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATATTAAGTGATTTCTCCTaGAGGAGAAATTCATGGCAT | + |
Preference number: 2 (lower is better) Translates to: IDMNSGLVPTTGFPMACILSDFS*RRNSWH Trigger: ATGCCATGAATTTCTCCTGCAGGAGAAATCACTTAA...TATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGAAGGGGTGGGAGGCTCTaGCTTGTACAAAAATTTAAA | + |
Preference number: 2 (lower is better) Translates to: SNHTHPYSEKGSRSCPERRGGRL*LVQKFK Trigger: TTTAAATTTTTGTACAAGCCAGAGCCTCCCACCCCT...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR TCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGAGTTGAAAAAGTTAAGTaGTTTCTCCTGCAGGAGAAA | + |
Preference number: 2 (lower is better) Translates to: SNHTHPYSEKGSRSCPERVEKVK*FLLQEK Trigger: TTTCTCCTGCAGGAGAAATCACTTAACTTTTTCAAC...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | TTTTCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCAAGCCAGTAATTAATTaGTTTTGCCTACCAGCAAAA | + |
Preference number: 2 (lower is better) Translates to: FSRKQTGEIGEQKAVMKAKPVIN*FCLPAK Trigger: TTTTGCTGGTAGGCAAAACCAATTAATTACTGGCTT...GGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CCA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGAGGGGTGGGAGGCTCTaGCTTGTACAAAAATTTAAA | + |
Preference number: 2 (lower is better) Translates to: FLEPTKVYIISHCPQKTLRGGRL*LVQKFK Trigger: TTTAAATTTTTGTACAAGCCAGAGCCTCCCACCCCT...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR CCA 72 bp | CTGGGAAGTGGCGCCGATGTGAGATGGTCCAGTCAGTaGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGGCCA | + |
Preference number: 3 (lower is better) Translates to: LGSGADVRWSSQ*GSGSSGSLLGP Trigger: TGGCCCCAGGAGACTACCACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 ENSMUST00000202283.5 |
||
3UTR GCA 72 bp | TGGCAGCCACAACCGAGAGGACTAGAGGGAGCCCAGTaGTTCCCCAAAGCGGATCTTCTGCCCTGCCTTCAG | + |
Preference number: 3 (lower is better) Translates to: WQPQPRGLEGAQ*FPKADLLPCLQ Trigger: CTGAAGGCAGGGCAGAAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCCTCTCGGTTGTGGCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR GCA 72 bp | CCATGGACAGGCAATCTTATAAGGTCAGCCCCGCAGTaGCCCTCACCCAGACAGCCTGAGGCTCCGCTGAAG | + |
Preference number: 3 (lower is better) Translates to: PWTGNLIRSAPQ*PSPRQPEAPLK Trigger: CTTCAGCGGAGCCTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTGCCTGTCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR-3UTR CAA 90 bp | AAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCTCGATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCA | + |
Preference number: 3 (lower is better) Translates to: KRIFCPAFSLKLKSLGASMVEPR*NSPRGS Trigger: TGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCAT...CGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR-3UTR CAA 90 bp | TGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACCTCACTCACCCTGTGCACATaGAGAGAGCCCTGTGACGGG | + |
Preference number: 3 (lower is better) Translates to: WPALGRQWIHSLCPAGTSLTLCT*REPCDG Trigger: CCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAG...TGAGGTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR TCA 72 bp | CGCAGTGCCCCTCACCCAGACAGCCTGAGGCTCCGCTaGAGACCCTCATGCTCCTGTGTGGAAAGATCCTTT | + |
Preference number: 3 (lower is better) Translates to: RSAPHPDSLRLR*RPSCSCVERSF Trigger: AAAGGATCTTTCCACACAGGAGCATGAGGGTCTTCAGCGGAGCCTCAGGCTGTCTGGGTGAGGGGCACTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 72 bp | CAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTaGCGGGAGGGGTCACAGCTAGAGGGTGTGGTAGTA | + |
Preference number: 3 (lower is better) Translates to: QAPHPVHIERAL*REGSQLEGVVV Trigger: TACTACCACACCCTCTAGCTGTGACCCCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR GCA 72 bp | GGAGCCCAGTGCTTCCCCAAAGCGGATCTTCTGCCCTaGCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCTC | + |
Preference number: 3 (lower is better) Translates to: GAQCFPKADLLP*LQPEVEVLGCL Trigger: GAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGGGGAAGCACTGGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR GCA 72 bp | GCATGTCCCCTAGTTCTGCAGGGCAGGGCCTCCACCTaGCCTTTCACTCCAGACTCTACCAGACAAGCCAGT | + |
Preference number: 3 (lower is better) Translates to: ACPLVLQGRAST*PFTPDSTRQAS Trigger: ACTGGCTTGTCTGGTAGAGTCTGGAGTGAAAGGGCAGGTGGAGGCCCTGCCCTGCAGAACTAGGGGACATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR-3UTR CAA 90 bp | TTCCCCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCA | + |
Preference number: 3 (lower is better) Translates to: FPKADLLPCLQPEVEVLGMVEPR*NSPRGS Trigger: TGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCAT...CCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | TGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTTGAACTCCCCCAGGGGCTCGGAATGCCCTCCTTGTaGGCATGTGTTACAAAGCTC | + |
Preference number: 3 (lower is better) Translates to: CLEDEHDGGAQVELPQGLGMPSL*ACVTKL Trigger: GAGCTTTGTAACACATGCCAACAAGGAGGGCATTCC...GAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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3UTR-3UTR CAA 90 bp | GCAGCCACAACCGAGAGGACTAGAGGGAGCCCAGTGCTTCCCCAAAGCGGATCTCTGAAGTTGAAGTCCTaGGGTGCCTCGAAGATGAGC | + |
Preference number: 3 (lower is better) Translates to: AATTERTRGSPVLPQSGSLKLKS*GASKMS Trigger: GCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAG...AGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCCTCTCGGTTGTGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR GCA 72 bp | CTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTaGCTCGAAGATGAGCACGATGGTGGAGCCCAGGTT | + |
Preference number: 3 (lower is better) Translates to: LPCLQPEVEVLG*LEDEHDGGAQV Trigger: AACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 72 bp | CGCGTTGGCACAGATTTATACAGGGACACCTCCCAGTaGCTAGCAAGTTTGGGCGGGATCTCCAAGCCCAGC | + |
Preference number: 3 (lower is better) Translates to: RVGTDLYRDTSQ*LASLGGISKPS Trigger: GCTGGGCTTGGAGATCCCGCCCAAACTTGCTAGTCACTGGGAGGTGTCCCTGTATAAATCTGTGCCAACGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR CCA 72 bp | CTGAAGACCCTCATGCTCCTGTGTGGAAAGATCCTTTaGCAGCCACAACCGAGAGGACTAGAGGGAGCCCAG | + |
Preference number: 3 (lower is better) Translates to: LKTLMLLCGKIL*QPQPRGLEGAQ Trigger: CTGGGCTCCCTCTAGTCCTCTCGGTTGTGGCTGCCAAAGGATCTTTCCACACAGGAGCATGAGGGTCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | CAGTCTGTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACATGGGAATGCCCTCCTaGTTGGCATGTGTTACAAAG | + |
Preference number: 3 (lower is better) Translates to: QSVPSRHLTLCTLREPCDMGMPS*LACVTK Trigger: CTTTGTAACACATGCCAACAAGGAGGGCATTCCCAT...GTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCACAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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3UTR-3UTR CAA 90 bp | GTACTGACCTCTATACCCTCTGCCTCCAACACAGTCCCTAGACCAATAGCAGCACTCACCCTGTGCACATaGAGAGAGCCCTGTGACGGG | + |
Preference number: 3 (lower is better) Translates to: VLTSIPSASNTVPRPIAALTLCT*REPCDG Trigger: CCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAG...TGCTGCTATTGGTCTAGGGACTGTGTTGGAGGCAGAGGGTATAGAGGTCAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | GCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACTCACCCTGTGCACATaGAGAGAGCCCTGTGACGGG | + |
Preference number: 3 (lower is better) Translates to: AESSYEGHVACSRKTVDPLTLCT*REPCDG Trigger: CCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAG...TGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | TCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGTACTCTCACCCTGTGCACATaGAGAGAGCCCTGTGACGGG | + |
Preference number: 3 (lower is better) Translates to: SCPYHWVPHGLHTCFLGTLTLCT*REPCDG Trigger: CCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAG...AGTACCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | GAAGTTGAAGTCCTTGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTTTGTACCTGGGGCTGTTaGTGTGCAGGTCTCGGTCAA | + |
Preference number: 3 (lower is better) Translates to: EVEVLGCLEDEHDGGAQVCTWGC*CAGLGQ Trigger: TTGACCGAGACCTGCACACAAACAGCCCCAGGTACA...AACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR TCA 72 bp | GTTCTTCACCTGCCCAAAGGTGAGGATCTTGCCATCTaGTGGGCTGGTCACACAGTGCAAGCCACATACGGG | + |
Preference number: 3 (lower is better) Translates to: VLHLPKGEDLAI*WAGHTVQATYG Trigger: CCCGTATGTGGCTTGCACTGTGTGACCAGCCCATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR GCA 72 bp | TGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTaGTCTAGGAAGACAGTGGATCCACAGTCTGTGCCC | + |
Preference number: 3 (lower is better) Translates to: WGAESSYEGHVA*SRKTVDPQSVP Trigger: GGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR GCA 72 bp | ACGCCCTTTACCTGCTCCACCTCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTGCCATCTGATGGGCTG | + |
Preference number: 3 (lower is better) Translates to: TPFTCSTSEFFT*PKVRILPSDGL Trigger: CAGCCCATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGAGGTGGAGCAGGTAAAGGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 |
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3UTR GCA 72 bp | ATGCCCTCGGATAGAGCCCACATTGGTGGCTCCCACTaGTGTCAACGAGAAGAACCCATGTTTCCAGTCTCC | + |
Preference number: 3 (lower is better) Translates to: MPSDRAHIGGSH*CQREEPMFPVS Trigger: GGAGACTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGGAGCCACCAATGTGGGCTCTATCCGAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
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3UTR CCA 72 bp | TACCTGGGGCTGTTTGTGTGCAGGTCTCGGTCAAAGTaGATACGGATAGAGCCCACATTGGTGGCTCCCACT | + |
Preference number: 3 (lower is better) Translates to: YLGLFVCRSRSK*IRIEPTLVAPT Trigger: AGTGGGAGCCACCAATGTGGGCTCTATCCGTATCCACTTTGACCGAGACCTGCACACAAACAGCCCCAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR CCA 72 bp | GGGGCTCACCCTTGCGCATGGGAATGCCCTCCTTGTTaGCATGTGTTACAAAGCTCAGGTCATTGTAGGAGC | + |
Preference number: 3 (lower is better) Translates to: GAHPCAWECPPC*HVLQSSGHCRS Trigger: GCTCCTACAATGACCTGAGCTTTGTAACACATGCCAACAAGGAGGGCATTCCCATGCGCAAGGGTGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR GCA 72 bp | GTGGATACGGATAGAGCCCACATTGGTGGCTCCCACTaGTGTCAACGAGAAGAACCCATGTTTCCAGTCTCC | + |
Preference number: 3 (lower is better) Translates to: VDTDRAHIGGSH*CQREEPMFPVS Trigger: GGAGACTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGGAGCCACCAATGTGGGCTCTATCCGTATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 |
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3UTR CCA 72 bp | CAAAGCTCAGGTCATTGTAGGAGCCCTTGCTGTACCTaGGGCTGTTTGTGTGCAGGTCTCGGTCAAAGTGGA | + |
Preference number: 3 (lower is better) Translates to: QSSGHCRSPCCT*GCLCAGLGQSG Trigger: TCCACTTTGACCGAGACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCTCCTACAATGACCTGAGCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR TCA 72 bp | GGTTCCCCATGGCCTGCATACCTGTTTTCTAGGTACTaGCCTCTATACCCTCTGCCTCCAACACAGTCCCTA | + |
Preference number: 3 (lower is better) Translates to: GSPWPAYLFSRY*PLYPLPPTQSL Trigger: TAGGGACTGTGTTGGAGGCAGAGGGTATAGAGGTCAGTACCTAGAAAACAGGTATGCAGGCCATGGGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR GCA 72 bp | CATGTGTTACAAAGCTCAGGTCATTGTAGGAGCCCTTaGTGTACCTGGGGCTGTTTGTGTGCAGGTCTCGGT | + |
Preference number: 3 (lower is better) Translates to: HVLQSSGHCRSP*CTWGCLCAGLG Trigger: ACCGAGACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCTCCTACAATGACCTGAGCTTTGTAACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR CAA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCGCCTTCAGCCTGAAGTaGAAGTCCTTGGGTGCCTCG | + |
Preference number: 3 (lower is better) Translates to: PTKVYIISHCPQKTLAEPAFSLK*KSLGAS Trigger: CGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGC...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | CCCACTGCTGTCAACGAGAAGAACCCATGTTTCCAGTCTCCAGTTAGGACTACACCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTG | + |
Preference number: 3 (lower is better) Translates to: PTAVNEKNPCFQSPVRTTPKVRI*PSDGLV Trigger: CACCAGCCCATCAGATGGCAAGATCCTCACCTTTGG...TGTAGTCCTAACTGGAGACTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197787.5 |
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3UTR TCA 72 bp | AGGAAGTTCTACTTGGTTGAGGCGACCACAGGCACGTaGCAGCAAACGCGTTGGCACAGATTTATACAGGGA | + |
Preference number: 3 (lower is better) Translates to: RKFYLVEATTGT*QQTRWHRFIQG Trigger: TCCCTGTATAAATCTGTGCCAACGCGTTTGCTGTCACGTGCCTGTGGTCGCCTCAACCAAGTAGAACTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR CCA 72 bp | GAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTaGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTG | + |
Preference number: 3 (lower is better) Translates to: EIGEQKAVMKAM*PALGRQWIHSL Trigger: CAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CCA 72 bp | AGAAATTCATGGCATTCCCAAGATCGACATGAACTCTaGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTG | + |
Preference number: 3 (lower is better) Translates to: RNSWHSQDRHEL*SCPYHWVPHGL Trigger: CAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATGCCATGAATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CCA 72 bp | GTTCACCCCAAAGGTCCAGATATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGGAAGTTCTACTTGGTT | + |
Preference number: 3 (lower is better) Translates to: VHPKGPDIQAVD*PPEPVRKFYLV Trigger: AACCAAGTAGAACTTCCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTATATCTGGACCTTTGGGGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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3UTR-3UTR CAA 90 bp | TCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCGTGGGAGGCTCTGGCTaGTACAAAAATTTAAAACAC | + |
Preference number: 3 (lower is better) Translates to: SQDRHELWSCPYHWVPHGVGGSG*YKNLKH Trigger: GTGTTTTAAATTTTTGTACAAGCCAGAGCCTCCCAC...GCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATACTGAAGTTGAAGTCCTaGGGTGCCTCGAAGATGAGC | + |
Preference number: 3 (lower is better) Translates to: KVYIISHCPQKTLAEPRILKLKS*GASKMS Trigger: GCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAG...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGCAGACGGGTGAAATaGGGGAGCAGAAAGCAGTTA | + |
Preference number: 3 (lower is better) Translates to: PTKVYIISHCPQKTLAEPSRRVK*GSRKQL Trigger: TAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCT...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR TCA 72 bp | TTAGGACTACACGCTCATTGTGACAAAAGAGCTCTTTaGTCCATCGGGCCATGCCAGGGTTCACTGACATCA | + |
Preference number: 3 (lower is better) Translates to: LGLHAHCDKRAL*SIGPCQGSLTS Trigger: TGATGTCAGTGAACCCTGGCATGGCCCGATGGATCAAAGAGCTCTTTTGTCACAATGAGCGTGTAGTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 ENSMUST00000202283.5 |
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3UTR TCA 72 bp | TGTTTCCAGTCTCCAGTTAGGACTACACGCTCATTGTaGCAAAAGAGCTCTTTGATCCATCGGGCCATGCCA | + |
Preference number: 3 (lower is better) Translates to: CFQSPVRTTRSL*QKSSLIHRAMP Trigger: TGGCATGGCCCGATGGATCAAAGAGCTCTTTTGTCACAATGAGCGTGTAGTCCTAACTGGAGACTGGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142957.6 ENSMUST00000197787.5 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCCTTCAGCCTGAAGTaGAAGTCCTTGGGTGCCTCG | + |
Preference number: 3 (lower is better) Translates to: FLEPTKVYIISHCPQKTLAFSLK*KSLGAS Trigger: CGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGC...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | TGGTGGCTCCCACTGCTGTCAACGAGAAGAACCCATGTTTCCAGTCTCCAGTTAGTGGGAGGCTCTGGCTaGTACAAAAATTTAAAACAC | + |
Preference number: 3 (lower is better) Translates to: WWLPLLSTRRTHVSSLQLVGGSG*YKNLKH Trigger: GTGTTTTAAATTTTTGTACAAGCCAGAGCCTCCCAC...TAACTGGAGACTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGGAGCCACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | GAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGAGCAGACGGGTGAAATaGGGGAGCAGAAAGCAGTTA | + |
Preference number: 3 (lower is better) Translates to: EPTKVYIISHCPQKTLAESRRVK*GSRKQL Trigger: TAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCT...CTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
3UTR-3UTR CAA 90 bp | GAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGATGGGAATGCCCTCCTaGTTGGCATGTGTTACAAAG | + |
Preference number: 3 (lower is better) Translates to: EPTKVYIISHCPQKTLAEMGMPS*LACVTK Trigger: CTTTGTAACACATGCCAACAAGGAGGGCATTCCCAT...CTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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3UTR-3UTR CAA 90 bp | TCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGGTGGGAGGCTCTGGCTaGTACAAAAATTTAAAACAC | + |
Preference number: 3 (lower is better) Translates to: SRKQTGEIGEQKAVMKAMVGGSG*YKNLKH Trigger: GTGTTTTAAATTTTTGTACAAGCCAGAGCCTCCCAC...CATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CCA 72 bp | TCACTCCAGACTCTACCAGACAAGCCAGTAATTAATTaGTTTTGCCTACCAGCAAAAGGATTCAGCCAGCTT | + |
Preference number: 3 (lower is better) Translates to: SLQTLPDKPVIN*FCLPAKGFSQL Trigger: AAGCTGGCTGAATCCTTTTGCTGGTAGGCAAAACCAATTAATTACTGGCTTGTCTGGTAGAGTCTGGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR-3UTR CAA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGTGGGAGGCTCTGGCTaGTACAAAAATTTAAAACAC | + |
Preference number: 3 (lower is better) Translates to: FLEPTKVYIISHCPQKTLVGGSG*YKNLKH Trigger: GTGTTTTAAATTTTTGTACAAGCCAGAGCCTCCCAC...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CCA 72 bp | AAAAAGTTAAGTGATTTCTCCTGCAGGAGAAATTCATaGCATTCCCAAGATCGACATGAACTCTGGTCTTGT | + |
Preference number: 3 (lower is better) Translates to: KKLSDFSCRRNS*HSQDRHELWSC Trigger: ACAAGACCAGAGTTCATGTCGATCTTGGGAATGCCATGAATTTCTCCTGCAGGAGAAATCACTTAACTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGGGGACACCCTGCTCATaGGCCTCCATCCCACCTGGC | + |
Preference number: 4 (lower is better) Translates to: VPSRHLTLCTLREPCDGRGTPCS*ASIPPG Trigger: GCCAGGTGGGATGGAGGCCCATGAGCAGGGTGTCCC...CCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | AGAGGACTAGAGGGAGCCCAGTGCTTCCCCAAAGCGGATCTTCTGCCCTGCCTTTCCATCCCACCTGGCTaGGGGGCCCGAGCGCACGGA | + |
Preference number: 4 (lower is better) Translates to: RGLEGAQCFPKADLLPCLSIPPG*GARAHG Trigger: TCCGTGCGCTCGGGCCCCTCAGCCAGGTGGGATGGA...AAGGCAGGGCAGAAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | GGCCAGGTAGATGACACAGTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGTCCATCCCACCTGGCTaGGGGGCCCGAGCGCACGGA | + |
Preference number: 4 (lower is better) Translates to: GQVDDTVVQLIPFPGDQLSIPPG*GARAHG Trigger: TCCGTGCGCTCGGGCCCCTCAGCCAGGTGGGATGGA...CAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCACTGTGTCATCTACCTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | GTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGCCAGGGGCTCACCCTTaGGCATGGGAATGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: VPSRHLTLCTLREPCDGRPGAHP*AWECPP Trigger: AGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGG...CCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | CCTCTGTATTGGCTCGAGGGCCCAGGAAGGACTCCAAGGAGTAGGTTACGCCCTGGCCTCCATCCCACCTaGCTGAGGGGCCCGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: PLYWLEGPGRTPRSRLRPGLHPT*LRGPSA Trigger: TGCGCTCGGGCCCCTCAGCCAGGTGGGATGGAGGCC...AGGGCGTAACCTACTCCTTGGAGTCCTTCCTGGGCCCTCGAGCCAATACAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GAAGGGCAGGTCCTCTGTATTGGCTCGAGGGCCCAGGAAGGACTCCAAGGAGTAGGCCTCCATCCCACCTaGCTGAGGGGCCCGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: EGQVLCIGSRAQEGLQGVGLHPT*LRGPSA Trigger: TGCGCTCGGGCCCCTCAGCCAGGTGGGATGGAGGCC...TACTCCTTGGAGTCCTTCCTGGGCCCTCGAGCCAATACAGAGGACCTGCCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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3UTR CAA 72 bp | GGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCACCCTTGCGCATGGGA | + |
Preference number: 4 (lower is better) Translates to: GASKMSTMVEPR*NSPRGSPLRMG Trigger: TCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | GAGAGCCCTGTGACGGGAGGGGTCACAGCTAGAGGGTGTGGTAGTACACAGCCACATACGGGCCGTGCCTaGGGCTTCAGCTTACGCCGG | + |
Preference number: 4 (lower is better) Translates to: ESPVTGGVTARGCGSTQPHTGRA*GFSLRR Trigger: CCGGCGTAAGCTGAAGCCTCAGGCACGGCCCGTATG...TGGCTGTGTACTACCACACCCTCTAGCTGTGACCCCTCCCGTCACAGGGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | GGGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTTGAACTCCCCCAGGGGGAGCTGGTCTGGACATaGAGCTCAGCTGGCCTAGCC | + |
Preference number: 4 (lower is better) Translates to: GCLEDEHDGGAQVELPQGELVWT*SSAGLA Trigger: GGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTC...CCCCTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | TGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACCTCATGGTGGAGCCCAGGTTaGACTCCCCCAGGGGCTCAC | + |
Preference number: 4 (lower is better) Translates to: WPALGRQWIHSLCPAGTSWWSPG*TPPGAH Trigger: GTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCA...TGAGGTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | AGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGGCCAGGTAGATGACACAGTGGGGACACCCTGCTCATaGGCCTCCATCCCACCTGGC | + |
Preference number: 4 (lower is better) Translates to: SGGVEAVVVSWGQVDDTVGTPCS*ASIPPG Trigger: GCCAGGTGGGATGGAGGCCCATGAGCAGGGTGTCCC...CACTGTGTCATCTACCTGGCCCCAGGAGACTACCACTGCTTCCACTCCCCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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3UTR CAA 72 bp | GTGGAGCCCAGGTTGAACTCCCCCAGGGGCTCACCCTaGCGCATGGGAATGCCCTCGGATAGAGCCCACATT | + |
Preference number: 4 (lower is better) Translates to: VEPRLNSPRGSP*RMGMPSDRAHI Trigger: AATGTGGGCTCTATCCGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | CAGTCTGTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACCATTTCGCTGCTGCTTaGAGCTCCGGTCCTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: QSVPSRHLTLCTLREPCDHFAAA*SSGPGC Trigger: GCAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATG...GTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCACAGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GCCGATGTGAGATGGTCCAGTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGAGGTAGTGGAGGATaGTCAGCGGCCAGGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: ADVRWSSQWGSGSSGSLLGGSGG*SAARSA Trigger: TGCGCTCCTGGCCGCTGACCATCCTCCACTACCTCC...CAGGAGACTACCACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGGGCCTCCATCCCACCTaGCTGAGGGGCCCGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: AVMKAMWPALGRQWIHSLGLHPT*LRGPSA Trigger: TGCGCTCGGGCCCCTCAGCCAGGTGGGATGGAGGCC...CAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGAGCCCTTGCTGTACCTaGGGCTGTTTGTGTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: VPSRHLTLCTLREPCDGRSPCCT*GCLCAG Trigger: ACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCT...CCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GAGAGCCCTGTGACGGGAGGGGTCACAGCTAGAGGGTGTGGTAGTACACAGCCACTGTTGCCAACAGGATaGGCACAGGGCGCAGCAGGA | + |
Preference number: 4 (lower is better) Translates to: ESPVTGGVTARGCGSTQPLLPTG*AQGAAG Trigger: TCCTGCTGCGCCCTGTGCCCATCCTGTTGGCAACAG...TGGCTGTGTACTACCACACCCTCTAGCTGTGACCCCTCCCGTCACAGGGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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3UTR CAA 72 bp | GTGGAGCCCAGGTTGAACTCCCCCAGGGGCTCACCCTaGCGCATGGGAATGCCCTCCTTGTTGGCATGTGTT | + |
Preference number: 4 (lower is better) Translates to: VEPRLNSPRGSP*RMGMPSLLACV Trigger: AACACATGCCAACAAGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 |
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CDS-3UTR TCA 90 bp | CCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGGGTTCACCTGCCCAAAGGTaGGGATCTTGCCATCTGATG | + |
Preference number: 4 (lower is better) Translates to: PSRHLTLCTLREPCDGRGSPAQR*GSCHLM Trigger: CATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGA...ACCCCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | TGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACCTCATGGGTGCCTCGAAGATaGGCACGATGGTGGAGCCCA | + |
Preference number: 4 (lower is better) Translates to: WPALGRQWIHSLCPAGTSWVPRR*ARWWSP Trigger: TGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCA...TGAGGTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GGCCAGGTAGATGACACAGTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGCATTTCGCTGCTGCTTaGAGCTCCGGTCCTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: GQVDDTVVQLIPFPGDQLHFAAA*SSGPGC Trigger: GCAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATG...CAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCACTGTGTCATCTACCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197787.5 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | CCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCGACATGCAGCTCAGCTaGCCTAGCCTCCGCCGTAGG | + |
Preference number: 4 (lower is better) Translates to: PKRIFCPAFSLKLKSLGADMQLS*PSLRRR Trigger: CCTACGGCGGAGGCTAGGCCAGCTGAGCTGCATGTC...GGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | CCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCGGAGGTAGTGGAGGATaGTCAGCGGCCAGGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: PKRIFCPAFSLKLKSLGAGGSGG*SAARSA Trigger: TGCGCTCCTGGCCGCTGACCATCCTCCACTACCTCC...GGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | CCTCTGTATTGGCTCGAGGGCCCAGGAAGGACTCCAAGGAGTAGGTTACGCCCTCTGTTGCCAACAGGATaGGCACAGGGCGCAGCAGGA | + |
Preference number: 4 (lower is better) Translates to: PLYWLEGPGRTPRSRLRPLLPTG*AQGAAG Trigger: TCCTGCTGCGCCCTGTGCCCATCCTGTTGGCAACAG...AGGGCGTAACCTACTCCTTGGAGTCCTTCCTGGGCCCTCGAGCCAATACAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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CDS-3UTR TCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGATCCATCCCACCTGGCTaGGGGGCCCGAGCGCACGGA | + |
Preference number: 4 (lower is better) Translates to: SNHTHPYSEKGSRSCPERSIPPG*GARAHG Trigger: TCCGTGCGCTCGGGCCCCTCAGCCAGGTGGGATGGA...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | TGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGTGCCTCGAAGATGAGCACGGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: CPAFSLKLKSLGASKMSTAGRTR*GCGSGA Trigger: TGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGC...CGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | CCTGAGAGACCCAGAACCTCTCCTCTGCACCCATGGACAGGCAATCTTATAAGGCATACGGGCCGTGCCTaGGGCTTCAGCTTACGCCGG | + |
Preference number: 4 (lower is better) Translates to: PERPRTSPLHPWTGNLIRHTGRA*GFSLRR Trigger: CCGGCGTAAGCTGAAGCCTCAGGCACGGCCCGTATG...CCTTATAAGATTGCCTGTCCATGGGTGCAGAGGAGAGGTTCTGGGTCTCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | GCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGCATACGGGCCGTGCCTaGGGCTTCAGCTTACGCCGG | + |
Preference number: 4 (lower is better) Translates to: AVMKAMWPALGRQWIHSLHTGRA*GFSLRR Trigger: CCGGCGTAAGCTGAAGCCTCAGGCACGGCCCGTATG...CAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | GAGAGCCCTGTGACGGGAGGGGTCACAGCTAGAGGGTGTGGTAGTACACAGCCACTAGAGGGAGCCCAGTaGTTCCCCAAAGCGGATCTT | + |
Preference number: 4 (lower is better) Translates to: ESPVTGGVTARGCGSTQPLEGAQ*FPKADL Trigger: AAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAG...TGGCTGTGTACTACCACACCCTCTAGCTGTGACCCCTCCCGTCACAGGGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GCAGCCACAACCGAGAGGACTAGAGGGAGCCCAGTGCTTCCCCAAAGCGGATCTGTTTCAGAGCTGGTCTaGACATGCAGCTCAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: AATTERTRGSPVLPQSGSVSELV*TCSSAG Trigger: GCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAAC...AGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAGTCCTCTCGGTTGTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GGGTCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGGGGACACCCTGCTCATaGGCCTCCATCCCACCTGGC | + |
Preference number: 4 (lower is better) Translates to: GSNHTHPYSEKGSRSCPEGTPCS*ASIPPG Trigger: GCCAGGTGGGATGGAGGCCCATGAGCAGGGTGTCCC...CTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGGGGACACCCTGCTCATaGGCCTCCATCCCACCTGGC | + |
Preference number: 4 (lower is better) Translates to: AVMKAMWPALGRQWIHSLGTPCS*ASIPPG Trigger: GCCAGGTGGGATGGAGGCCCATGAGCAGGGTGTCCC...CAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGG | + |
Preference number: 4 (lower is better) Translates to: AMWPALGRQWIHSLCPAGIQAVD*PPEPVR Trigger: CCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTAT...GCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | CAGTCTGTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACAGATGGTCCAGTCAGTaGGGGAGTGGAAGCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: QSVPSRHLTLCTLREPCDRWSSQ*GSGSSG Trigger: ACCACTGCTTCCACTCCCCCACTGACTGGACCATCT...GTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCACAGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | CCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGGGTCGGACAGGAGCAGTATaGAAATTTCTGACACCTGCC | + |
Preference number: 4 (lower is better) Translates to: PSRHLTLCTLREPCDGRGRTGAV*KFLTPA Trigger: GGCAGGTGTCAGAAATTTCCATACTGCTCCTGTCCG...ACCCCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | CCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGGGTAGGTCTCGGTCAAAGTaGATACGGATAGAGCCCACA | + |
Preference number: 4 (lower is better) Translates to: PSRHLTLCTLREPCDGRGRSRSK*IRIEPT Trigger: TGTGGGCTCTATCCGTATCCACTTTGACCGAGACCT...ACCCCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | ATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: MKAMWPALGRQWIHSLCPAGRTR*GCGSGA Trigger: TGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGC...TGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | ACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGACCCAGAACCAGGGACACCTCCCAGTaGCTAGCAAGTTTGGGCGGG | + |
Preference number: 4 (lower is better) Translates to: THPYSEKGSRSCPERPRTRDTSQ*LASLGG Trigger: CCCGCCCAAACTTGCTAGTCACTGGGAGGTGTCCCT...GGTTCTGGGTCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | GGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGATGGTGGAGCCCAGGTTaGACTCCCCCAGGGGCTCAC | + |
Preference number: 4 (lower is better) Translates to: GEIGEQKAVMKAMWPALGWWSPG*TPPGAH Trigger: GTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCA...TCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | GGGCCTCCACCTGCCCTTTCACTCCAGACTCTACCAGACAAGCCAGTAATTAATTGGTGGAGCCCAGGTTaGACTCCCCCAGGGGCTCAC | + |
Preference number: 4 (lower is better) Translates to: GPPPALSLQTLPDKPVINWWSPG*TPPGAH Trigger: GTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCA...ATTAATTACTGGCTTGTCTGGTAGAGTCTGGAGTGAAAGGGCAGGTGGAGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | ATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCATGGGTGCCTCGAAGATaGGCACGATGGTGGAGCCCA | + |
Preference number: 4 (lower is better) Translates to: MKAMWPALGRQWIHSLCPWVPRR*ARWWSP Trigger: TGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCA...TGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | AGGTTGAACTCCCCCAGGGGCTCACCCTTGCGCATGGGAATGCCCTCCTTGTTGCATTGTAGGAGCCCTTaGTGTACCTGGGGCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: RLNSPRGSPLRMGMPSLLHCRSP*CTWGCL Trigger: CAAACAGCCCCAGGTACAGCAAGGGCTCCTACAATG...CAACAAGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
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CDS-3UTR GCA 90 bp | CAGTCTGTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGCGGATCTTCTGCCCTaGCTTCAGCCTGAAGTTGAA | + |
Preference number: 4 (lower is better) Translates to: QSVPSRHLTLCTLREPCDADLLP*LQPEVE Trigger: TTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGC...GTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCACAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | GAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCCTAGAGGGAGCCCAGTaGTTCCCCAAAGCGGATCTT | + |
Preference number: 4 (lower is better) Translates to: EGHVACSRKTVDPQSVPSLEGAQ*FPKADL Trigger: AAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAG...GCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | ATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCACATTTCGCTGCTGCTTaGAGCTCCGGTCCTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: MKAMWPALGRQWIHSLCPHFAAA*SSGPGC Trigger: GCAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATG...TGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GCCCACATTGGTGGCTCCCACTGCTGTCAACGAGAAGAACCCATGTTTCCAGTCCATTTCGCTGCTGCTTaGAGCTCCGGTCCTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: AHIGGSHCCQREEPMFPVHFAAA*SSGPGC Trigger: GCAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATG...GACTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGGGAGCCACCAATGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197787.5 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | CATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACGTTTCAGAGCTGGTCTaGACATGCAGCTCAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: HVACSRKTVDPQSVPSRHVSELV*TCSSAG Trigger: GCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAAC...GTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GAAGGGCAGGTCCTCTGTATTGGCTCGAGGGCCCAGGAAGGACTCCAAGGAGTAGCGCAGTTTCAGAGCTaGTCTGGACATGCAGCTCAG | + |
Preference number: 4 (lower is better) Translates to: EGQVLCIGSRAQEGLQGVAQFQS*SGHAAQ Trigger: CTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCGC...TACTCCTTGGAGTCCTTCCTGGGCCCTCGAGCCAATACAGAGGACCTGCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | ACAGGCAATCTTATAAGGTCAGCCCCGCAGTGCCCCTCACCCAGACAGCCTGAGGCGCAGTTTCAGAGCTaGTCTGGACATGCAGCTCAG | + |
Preference number: 4 (lower is better) Translates to: TGNLIRSAPQCPSPRQPEAQFQS*SGHAAQ Trigger: CTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCGC...CTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GCCGATGTGAGATGGTCCAGTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGG | + |
Preference number: 4 (lower is better) Translates to: ADVRWSSQWGSGSSGSLLIQAVD*PPEPVR Trigger: CCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTAT...CAGGAGACTACCACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | TGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACCTCAGCAGTGGTAGTCTCCTaGGGCCAGGTAGATGACACA | + |
Preference number: 4 (lower is better) Translates to: WPALGRQWIHSLCPAGTSAVVVS*GQVDDT Trigger: TGTGTCATCTACCTGGCCCCAGGAGACTACCACTGC...TGAGGTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATATCCATCCCACCTGGCTaGGGGGCCCGAGCGCACGGA | + |
Preference number: 4 (lower is better) Translates to: KVYIISHCPQKTLAEPRISIPPG*GARAHG Trigger: TCCGTGCGCTCGGGCCCCTCAGCCAGGTGGGATGGA...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | CCTGAGAGACCCAGAACCTCTCCTCTGCACCCATGGACAGGCAATCTTATAAGGGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: PERPRTSPLHPWTGNLIRAGRTR*GCGSGA Trigger: TGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGC...CCTTATAAGATTGCCTGTCCATGGGTGCAGAGGAGAGGTTCTGGGTCTCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | ATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATAGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: IDMNSGLVPTTGFPMACIAGRTR*GCGSGA Trigger: TGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGC...TATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | GTAGATGACACAGTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGGTTTCTGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: VDDTVVQLIPFPGDQLVSAGRTR*GCGSGA Trigger: TGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGC...AGAAACCAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCACTGTGTCATCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | ACAGGCAATCTTATAAGGTCAGCCCCGCAGTGCCCCTCACCCAGACAGCCTGAGTCACCTGCCCAAAGGTaGGGATCTTGCCATCTGATG | + |
Preference number: 4 (lower is better) Translates to: TGNLIRSAPQCPSPRQPESPAQR*GSCHLM Trigger: CATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGA...CTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | GAAGGGCAGGTCCTCTGTATTGGCTCGAGGGCCCAGGAAGGACTCCAAGGAGTATCACCTGCCCAAAGGTaGGGATCTTGCCATCTGATG | + |
Preference number: 4 (lower is better) Translates to: EGQVLCIGSRAQEGLQGVSPAQR*GSCHLM Trigger: CATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGA...TACTCCTTGGAGTCCTTCCTGGGCCCTCGAGCCAATACAGAGGACCTGCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | GAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCTCACCTGCCCAAAGGTaGGGATCTTGCCATCTGATG | + |
Preference number: 4 (lower is better) Translates to: EGHVACSRKTVDPQSVPSSPAQR*GSCHLM Trigger: CATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGA...GCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | CATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACGACAAAAGAGCTCTTTaGTCCATCGGGCCATGCCAG | + |
Preference number: 4 (lower is better) Translates to: HVACSRKTVDPQSVPSRHDKRAL*SIGPCQ Trigger: CTGGCATGGCCCGATGGATCAAAGAGCTCTTTTGTC...GTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 |
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CDS-3UTR GCA 90 bp | ATGACACAGTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGGTTTCTGAAGGAGCTGGTCTGGACATaGAGCTCAGCTGGCCTAGCC | + |
Preference number: 4 (lower is better) Translates to: MTQWYSSFPSRVTSWFLKELVWT*SSAGLA Trigger: GGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTC...CTTCAGAAACCAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCACTGTGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | ACAGGCAATCTTATAAGGTCAGCCCCGCAGTGCCCCTCACCCAGACAGCCTGAGCATTGTAGGAGCCCTTaGTGTACCTGGGGCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: TGNLIRSAPQCPSPRQPEHCRSP*CTWGCL Trigger: CAAACAGCCCCAGGTACAGCAAGGGCTCCTACAATG...CTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | GCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACCAGGGGCTCACCCTTaGGCATGGGAATGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: AESSYEGHVACSRKTVDPPGAHP*AWECPP Trigger: AGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGG...TGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GGAGTGGAAGCAGTGGTAGTCTCCTGGGGCCAGGTAGATGACACAGTGGTACAGGTTTCAGAGCTGGTCTaGACATGCAGCTCAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: GVEAVVVSWGQVDDTVVQVSELV*TCSSAG Trigger: GCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAAC...CTGTACCACTGTGTCATCTACCTGGCCCCAGGAGACTACCACTGCTTCCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | ACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGACCCAGAAGGCGCCGATGTGAGATaGTCCAGTCAGTGGGGGAGT | + |
Preference number: 4 (lower is better) Translates to: TPTHTLKRGLGPVLRDPEGADVR*SSQWGS Trigger: ACTCCCCCACTGACTGGACCATCTCACATCGGCGCC...TTCTGGGTCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCCGGACAGGAGCAGTATaGAAATTTCTGACACCTGCC | + |
Preference number: 4 (lower is better) Translates to: AMWPALGRQWIHSLCPAGRTGAV*KFLTPA Trigger: GGCAGGTGTCAGAAATTTCCATACTGCTCCTGTCCG...GCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTGTTGCCAACAGGATaGGCACAGGGCGCAGCAGGA | + |
Preference number: 4 (lower is better) Translates to: ELWSCPYHWVPHGLHTCFLLPTG*AQGAAG Trigger: TCCTGCTGCGCCCTGTGCCCATCCTGTTGGCAACAG...AAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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3UTR CAA 72 bp | ATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTaGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: IFCPAFSLKLKS*GASKMSTMVEP Trigger: GGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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3UTR CAA 72 bp | GCTGAAGACCCTCATGCTCCTGTGTGGAAAGATCCTTaGGCAGCCACAACCGAGAGGACTAGAGGGAGCCCA | + |
Preference number: 4 (lower is better) Translates to: AEDPHAPVWKDP*AATTERTRGSP Trigger: TGGGCTCCCTCTAGTCCTCTCGGTTGTGGCTGCCAAAGGATCTTTCCACACAGGAGCATGAGGGTCTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | TCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGTACTGAGCTGGTCTGGACATaGAGCTCAGCTGGCCTAGCC | + |
Preference number: 4 (lower is better) Translates to: SCPYHWVPHGLHTCFLGTELVWT*SSAGLA Trigger: GGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTC...AGTACCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | CTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGATACCCTCCACCTGTTaGCAACAGGATGGGCACAGG | + |
Preference number: 4 (lower is better) Translates to: LVLSLPLGSPWPAYLFSRIPSTC*QQDGHR Trigger: CCTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTAT...CCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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CDS-3UTR GCA 90 bp | ACAGGCAATCTTATAAGGTCAGCCCCGCAGTGCCCCTCACCCAGACAGCCTGAGGTTGAAGTCCTTGGGTaGCTCGAAGATGAGCACGAT | + |
Preference number: 4 (lower is better) Translates to: TGNLIRSAPQCPSPRQPEVEVLG*LEDEHD Trigger: ATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAAC...CTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | TTCCCCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTTGAAGTCCTTGGGGCGCAGTTTCAGAGCTaGTCTGGACATGCAGCTCAG | + |
Preference number: 4 (lower is better) Translates to: FPKADLLPCLQPEVEVLGAQFQS*SGHAAQ Trigger: CTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCGC...CCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGAGGAGGTAGTGGAGGATaGTCAGCGGCCAGGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: SNHTHPYSEKGSRSCPERGGSGG*SAARSA Trigger: TGCGCTCCTGGCCGCTGACCATCCTCCACTACCTCC...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | AGACAGCCTGAGGCTCCGCTGAAGACCCTCATGCTCCTGTGTGGAAAGATCCTTATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGG | + |
Preference number: 4 (lower is better) Translates to: RQPEAPLKTLMLLCGKILIQAVD*PPEPVR Trigger: CCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTAT...AAGGATCTTTCCACACAGGAGCATGAGGGTCTTCAGCGGAGCCTCAGGCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | CTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGGCAGTGGTAGTCTCCTaGGGCCAGGTAGATGACACA | + |
Preference number: 4 (lower is better) Translates to: LVLSLPLGSPWPAYLFSRAVVVS*GQVDDT Trigger: TGTGTCATCTACCTGGCCCCAGGAGACTACCACTGC...CCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GAAGTTGAAGTCCTTGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTTGCAGTGGTAGTCTCCTaGGGCCAGGTAGATGACACA | + |
Preference number: 4 (lower is better) Translates to: EVEVLGCLEDEHDGGAQVAVVVS*GQVDDT Trigger: TGTGTCATCTACCTGGCCCCAGGAGACTACCACTGC...AACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
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CDS-3UTR CCA 90 bp | CTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGAGATGGTCCAGTCAGTaGGGGAGTGGAAGCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: LVLSLPLGSPWPAYLFSRRWSSQ*GSGSSG Trigger: ACCACTGCTTCCACTCCCCCACTGACTGGACCATCT...CCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | ATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAAGATGGTCCAGTCAGTaGGGGAGTGGAAGCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: MKAMWPALGRQWIHSLCPRWSSQ*GSGSSG Trigger: ACCACTGCTTCCACTCCCCCACTGACTGGACCATCT...TGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCAGGCGCCGATGTGAGATaGTCCAGTCAGTGGGGGAGT | + |
Preference number: 4 (lower is better) Translates to: AESSYEGHVACSRKTVDPGADVR*SSQWGS Trigger: ACTCCCCCACTGACTGGACCATCTCACATCGGCGCC...TGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | ATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAAGCCCTTGCTGTACCTaGGGCTGTTTGTGTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: MKAMWPALGRQWIHSLCPSPCCT*GCLCAG Trigger: ACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCT...TGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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3UTR CAA 72 bp | CCAAAGCGGATCTTCTGCCCTGCCTTCAGCCTGAAGTaGAAGTCCTTGGGTGCCTCGAAGATGAGCACGATG | + |
Preference number: 4 (lower is better) Translates to: PKRIFCPAFSLK*KSLGASKMSTM Trigger: CATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000142957.6 ENSMUST00000202283.5 |
||
CDS-3UTR TCA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATACATACGGGCCGTGCCTaGGGCTTCAGCTTACGCCGG | + |
Preference number: 4 (lower is better) Translates to: KVYIISHCPQKTLAEPRIHTGRA*GFSLRR Trigger: CCGGCGTAAGCTGAAGCCTCAGGCACGGCCCGTATG...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | CCACTGCTGTCAACGAGAAGAACCCATGTTTCCAGTCTCCAGTTAGGACTACACGAGCTGGTCTGGACATaGAGCTCAGCTGGCCTAGCC | + |
Preference number: 4 (lower is better) Translates to: PLLSTRRTHVSSLQLGLHELVWT*SSAGLA Trigger: GGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTC...GTGTAGTCCTAACTGGAGACTGGAAACATGGGTTCTTCTCGTTGACAGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
||
CDS-3UTR GCA 90 bp | CTAGAGGGTGTGGTAGTACACAGCCAGGAGTTAGGGGTGGGAGGCTCTGGCTTGTCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: LEGVVVHSQELGVGGSGLSEFFT*PKVRIL Trigger: CAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGA...CAAGCCAGAGCCTCCCACCCCTAACTCCTGGCTGTGTACTACCACACCCTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGACTGGGGCTGTTTGTGTaGAGGTCCTGGGAAGTGGCG | + |
Preference number: 4 (lower is better) Translates to: SNHTHPYSEKGSRSCPERLGLFV*RSWEVA Trigger: CGCCACTTCCCAGGACCTGCACACAAACAGCCCCAG...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
||
CDS-3UTR GCA 90 bp | ACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGACCCAGAACCCATTGTAGGAGCCCTTaGTGTACCTGGGGCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: THPYSEKGSRSCPERPRTHCRSP*CTWGCL Trigger: CAAACAGCCCCAGGTACAGCAAGGGCTCCTACAATG...GGTTCTGGGTCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | CAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGACCAGGGGCTCACCCTTaGGCATGGGAATGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: QRSTSLVIVLRRHWQSPGPGAHP*AWECPP Trigger: AGGAGGGCATTCCCATGCGCAAGGGTGAGCCCCTGG...TCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
||
CDS-3UTR CCA 90 bp | GGGTCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGGCGCAGTTTCAGAGCTaGTCTGGACATGCAGCTCAG | + |
Preference number: 4 (lower is better) Translates to: GSNHTHPYSEKGSRSCPEAQFQS*SGHAAQ Trigger: CTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCGC...CTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
||
CDS-3UTR CCA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCGGAGGTAGTGGAGGATaGTCAGCGGCCAGGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: PTKVYIISHCPQKTLAEPGGSGG*SAARSA Trigger: TGCGCTCCTGGCCGCTGACCATCCTCCACTACCTCC...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGAGGCGCCGATGTGAGATaGTCCAGTCAGTGGGGGAGT | + |
Preference number: 4 (lower is better) Translates to: SNHTHPYSEKGSRSCPERGADVR*SSQWGS Trigger: ACTCCCCCACTGACTGGACCATCTCACATCGGCGCC...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTAGCCCTTGCTGTACCTaGGGCTGTTTGTGTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: ELWSCPYHWVPHGLHTCFSPCCT*GCLCAG Trigger: ACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCT...AAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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3UTR CAA 72 bp | ACCTCAGAGTTCTTCACCTGCCCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTCACACAGTGCAAGCCA | + |
Preference number: 4 (lower is better) Translates to: TSEFFTCPKVRI*PSDGLVTQCKP Trigger: TGGCTTGCACTGTGTGACCAGCCCATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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CDS-3UTR TCA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCGCCGGAAGAACTCGCTaGGGTTGCGGTAGTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: PTKVYIISHCPQKTLAEPAGRTR*GCGSGA Trigger: TGCACCACTACCGCAACCTCAGCGAGTTCTTCCGGC...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | ACAGGCAATCTTATAAGGTCAGCCCCGCAGTGCCCCTCACCCAGACAGCCTGAGTTTCTGACACCTGCCTaGAGAGGCAATTTCTGTAAG | + |
Preference number: 4 (lower is better) Translates to: TGNLIRSAPQCPSPRQPEFLTPA*RGNFCK Trigger: CTTACAGAAATTGCCTCTTCAGGCAGGTGTCAGAAA...CTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | GCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCAGTGCAGGTCCTCCACTaGAGCCTCAGTCATGTTCAC | + |
Preference number: 4 (lower is better) Translates to: AESSYEGHVACSRKTVDPVQVLH*SLSHVH Trigger: GTGAACATGACTGAGGCTGCAGTGGAGGACCTGCAC...TGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | CTCCACTGCAGCCTCAGTCATGTTCACCCCAAAGGTCCAGATATACAGGCTGTAATACCCTCCACCTGTTaGCAACAGGATGGGCACAGG | + |
Preference number: 4 (lower is better) Translates to: LHCSLSHVHPKGPDIQAVIPSTC*QQDGHR Trigger: CCTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTAT...TACAGCCTGTATATCTGGACCTTTGGGGTGAACATGACTGAGGCTGCAGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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CDS-3UTR GCA 90 bp | GAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTGTACTTCTCATACTaGCGGTACCCGGCATACCCT | + |
Preference number: 4 (lower is better) Translates to: ELWSCPYHWVPHGLHTCFLYFSY*RYPAYP Trigger: AGGGTATGCCGGGTACCGGCAGTATGAGAAGTACAG...AAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | AGACAGCCTGAGGCTCCGCTGAAGACCCTCATGCTCCTGTGTGGAAAGATCCTTGTTGAAGTCCTTGGGTaGCTCGAAGATGAGCACGAT | + |
Preference number: 4 (lower is better) Translates to: RQPEAPLKTLMLLCGKILVEVLG*LEDEHD Trigger: ATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAAC...AAGGATCTTTCCACACAGGAGCATGAGGGTCTTCAGCGGAGCCTCAGGCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | TTTTCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATTGGTGGCTCCCACTaGTGGGAAGTGGCGCCGATG | + |
Preference number: 4 (lower is better) Translates to: FSRKQTGEIGEQKAVMKAIGGSH*WEVAPM Trigger: CATCGGCGCCACTTCCCAGCAGTGGGAGCCACCAAT...GGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | GGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAGTTTCAGAGCTGGTCTaGACATGCAGCTCAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: GEIGEQKAVMKAMWPALGVSELV*TCSSAG Trigger: GCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAAC...TCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGGCCTCCATCCCACCTaGCTGAGGGGCCCGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: FLEPTKVYIISHCPQKTLGLHPT*LRGPSA Trigger: TGCGCTCGGGCCCCTCAGCCAGGTGGGATGGAGGCC...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GTACTGACCTCTATACCCTCTGCCTCCAACACAGTCCCTAGACCAATAGCAGCAGCAGTGGTAGTCTCCTaGGGCCAGGTAGATGACACA | + |
Preference number: 4 (lower is better) Translates to: VLTSIPSASNTVPRPIAAAVVVS*GQVDDT Trigger: TGTGTCATCTACCTGGCCCCAGGAGACTACCACTGC...TGCTGCTATTGGTCTAGGGACTGTGTTGGAGGCAGAGGGTATAGAGGTCAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | CATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATTCACCTGCCCAAAGGTaGGGATCTTGCCATCTGATG | + |
Preference number: 4 (lower is better) Translates to: HSQDRHELWSCPYHWVPHSPAQR*GSCHLM Trigger: CATCAGATGGCAAGATCCTCACCTTTGGGCAGGTGA...ATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR TCA 90 bp | GAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGAGGGACACCTCCCAGTaGCTAGCAAGTTTGGGCGGG | + |
Preference number: 4 (lower is better) Translates to: EPTKVYIISHCPQKTLAERDTSQ*LASLGG Trigger: CCCGCCCAAACTTGCTAGTCACTGGGAGGTGTCCCT...CTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | CATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGACAAAAGAGCTCTTTaGTCCATCGGGCCATGCCAG | + |
Preference number: 4 (lower is better) Translates to: HSQDRHELWSCPYHWVPHDKRAL*SIGPCQ Trigger: CTGGCATGGCCCGATGGATCAAAGAGCTCTTTTGTC...ATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 |
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CDS-3UTR GCA 90 bp | TCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCTCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: SQDRHELWSCPYHWVPHGSEFFT*PKVRIL Trigger: CAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGA...GCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | ACAGTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGGTTTCTGAAGGAGTCTCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: TVVQLIPFPGDQLVSEGVSEFFT*PKVRIL Trigger: CAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGA...GACTCCTTCAGAAACCAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | TATTGGCTCGAGGGCCCAGGAAGGACTCCAAGGAGTAGGTTACGCCCTTTACCTTCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: YWLEGPGRTPRSRLRPLPSEFFT*PKVRIL Trigger: CAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGA...AGGTAAAGGGCGTAACCTACTCCTTGGAGTCCTTCCTGGGCCCTCGAGCCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | GCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCAGCGGATCTTCTGCCCTaGCTTCAGCCTGAAGTTGAA | + |
Preference number: 4 (lower is better) Translates to: AESSYEGHVACSRKTVDPADLLP*LQPEVE Trigger: TTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGC...TGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | AGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGG | + |
Preference number: 4 (lower is better) Translates to: RKQTGEIGEQKAVMKAMWIQAVD*PPEPVR Trigger: CCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTAT...CCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | GAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGGGCGCCGATGTGAGATaGTCCAGTCAGTGGGGGAGT | + |
Preference number: 4 (lower is better) Translates to: EPTKVYIISHCPQKTLAEGADVR*SSQWGS Trigger: ACTCCCCCACTGACTGGACCATCTCACATCGGCGCC...CTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | AGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGAGCCCTTGCTGTACCTaGGGCTGTTTGTGTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: RKQTGEIGEQKAVMKAMWSPCCT*GCLCAG Trigger: ACCTGCACACAAACAGCCCCAGGTACAGCAAGGGCT...CCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | TCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCTTTCTGACACCTGCCTaGAGAGGCAATTTCTGTAAG | + |
Preference number: 4 (lower is better) Translates to: SQDRHELWSCPYHWVPHGFLTPA*RGNFCK Trigger: CTTACAGAAATTGCCTCTTCAGGCAGGTGTCAGAAA...GCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | AGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCAGTATGGAAATTTCTaGCACCTGCTCCGCCACAGC | + |
Preference number: 4 (lower is better) Translates to: RKQTGEIGEQKAVMKAMWQYGNF*HLLRHS Trigger: GCTGTGGCGGAGCAGGTGTCAGAAATTTCCATACTG...CCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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CDS-3UTR GCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGAGCGGATCTTCTGCCCTaGCTTCAGCCTGAAGTTGAA | + |
Preference number: 4 (lower is better) Translates to: SNHTHPYSEKGSRSCPERADLLP*LQPEVE Trigger: TTCAACTTCAGGCTGAAGGCAGGGCAGAAGATCCGC...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | TTTTCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCCTAGAGGGAGCCCAGTaGTTCCCCAAAGCGGATCTT | + |
Preference number: 4 (lower is better) Translates to: FSRKQTGEIGEQKAVMKALEGAQ*FPKADL Trigger: AAGATCCGCTTTGGGGAAGCACTGGGCTCCCTCTAG...GGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGG | + |
Preference number: 4 (lower is better) Translates to: PTKVYIISHCPQKTLAEPIQAVD*PPEPVR Trigger: CCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTAT...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | TGCAGGAGAAATTCATGGCATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCAGATGGTCCAGTCAGTaGGGGAGTGGAAGCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: CRRNSWHSQDRHELWSCPRWSSQ*GSGSSG Trigger: ACCACTGCTTCCACTCCCCCACTGACTGGACCATCT...GGGACAAGACCAGAGTTCATGTCGATCTTGGGAATGCCATGAATTTCTCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR TCA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCGACCACAGGCACGTaGCAGCAAACGCGTTGGCAC | + |
Preference number: 4 (lower is better) Translates to: FLEPTKVYIISHCPQKTLATTGT*QQTRWH Trigger: GTGCCAACGCGTTTGCTGTCACGTGCCTGTGGTCGC...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | GGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGATCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: GEIGEQKAVMKAMWPALGSEFFT*PKVRIL Trigger: CAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGA...TCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR GCA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCCATTGTAGGAGCCCTTaGTGTACCTGGGGCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: PTKVYIISHCPQKTLAEPHCRSP*CTWGCL Trigger: CAAACAGCCCCAGGTACAGCAAGGGCTCCTACAATG...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATAATACCCTCCACCTGTTaGCAACAGGATGGGCACAGG | + |
Preference number: 4 (lower is better) Translates to: KVYIISHCPQKTLAEPRIIPSTC*QQDGHR Trigger: CCTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTAT...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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CDS-3UTR GCA 90 bp | TTTTCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCCTGTACTTCTCATACTaGCGGTACCCGGCATACCCT | + |
Preference number: 4 (lower is better) Translates to: FSRKQTGEIGEQKAVMKALYFSY*RYPAYP Trigger: AGGGTATGCCGGGTACCGGCAGTATGAGAAGTACAG...GGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATAATACAGGCTGTAGACTaGCCTCCGGAGCCAGTAAGG | + |
Preference number: 4 (lower is better) Translates to: KVYIISHCPQKTLAEPRIIQAVD*PPEPVR Trigger: CCTTACTGGCTCCGGAGGCCAGTCTACAGCCTGTAT...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS-3UTR CCA 90 bp | TCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGAAGGTCTCGGTCAAAGTaGATACGGATAGAGCCCACA | + |
Preference number: 4 (lower is better) Translates to: SNHTHPYSEKGSRSCPERRSRSK*IRIEPT Trigger: TGTGGGCTCTATCCGTATCCACTTTGACCGAGACCT...TCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | AGCCTCAGTCATGTTCACCCCAAAGGTCCAGATATACAGGCTGTAGACTGGCCTCGGACAGGAGCAGTATaGAAATTTCTGACACCTGCT | + |
Preference number: 4 (lower is better) Translates to: SLSHVHPKGPDIQAVDWPRTGAV*KFLTPA Trigger: AGCAGGTGTCAGAAATTTCCATACTGCTCCTGTCCG...AGGCCAGTCTACAGCCTGTATATCTGGACCTTTGGGGTGAACATGACTGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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CDS-3UTR GCA 90 bp | ATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATAGAAATTTCTGACACCTaGCTGAAGAGGCAATTTCTG | + |
Preference number: 4 (lower is better) Translates to: IDMNSGLVPTTGFPMACIEISDT*LKRQFL Trigger: CAGAAATTGCCTCTTCAGGCAGGTGTCAGAAATTTC...TATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCGTTGAAGTCCTTGGGTaGCTCGAAGATGAGCACGAT | + |
Preference number: 4 (lower is better) Translates to: PTKVYIISHCPQKTLAEPVEVLG*LEDEHD Trigger: ATCGTGCTCATCTTCGAGGCACCCAAGGACTTCAAC...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | ATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGGAATGCCCTCCTTGTTaGCATGTGTTACAAAGCTCA | + |
Preference number: 4 (lower is better) Translates to: IGEQKAVMKAMWPALGRQECPPC*HVLQSS Trigger: TGAGCTTTGTAACACATGCCAACAAGGAGGGCATTC...CTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | TCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGTACTGAATGCCCTCCTTGTTaGCATGTGTTACAAAGCTCA | + |
Preference number: 4 (lower is better) Translates to: SCPYHWVPHGLHTCFLGTECPPC*HVLQSS Trigger: TGAGCTTTGTAACACATGCCAACAAGGAGGGCATTC...AGTACCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | CATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGAAATTTCTGACACCTaGCTGAAGAGGCAATTTCTG | + |
Preference number: 4 (lower is better) Translates to: HSQDRHELWSCPYHWVPHEISDT*LKRQFL Trigger: CAGAAATTGCCTCTTCAGGCAGGTGTCAGAAATTTC...ATGGGGAACCCAGTGGTAGGGACAAGACCAGAGTTCATGTCGATCTTGGGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR CCA 90 bp | CAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGAGAATGCCCTCCTTGTTaGCATGTGTTACAAAGCTCA | + |
Preference number: 4 (lower is better) Translates to: QRSTSLVIVLRRHWQSPGECPPC*HVLQSS Trigger: TGAGCTTTGTAACACATGCCAACAAGGAGGGCATTC...TCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR GCA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGTCAGAGTTCTTCACCTaGCCAAAGGTGAGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: FLEPTKVYIISHCPQKTLSEFFT*PKVRIL Trigger: CAAGATCCTCACCTTTGGGCAGGTGAAGAACTCTGA...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 ENSMUST00000202283.5 |
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CDS CCA 90 bp | AGTGGAGGATGGTCAGCGGCCAGGAGCGCAGTTTCAGAGCTGGTCTaGACATGCAGCTCAGCTGGCCTAGCCTCCGCCGTAGGGCCAGCT | + |
Preference number: 5 (lower is better) Translates to: SGGWSAARSAVSELV*TCSSAGLASAVGPA Trigger: AGCTGGCCCTACGGCGGAGGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCGCTCCTGGCCGCTGACCATCCTCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS TCA 90 bp | ATTTATACAGGGACACCCTGCTCATGGGCCTCCATCCCACCTGGCTaGGGGGCCCGAGCGCACGGAAGGGCAGGAGGTAGTGGAGGATGG | + |
Preference number: 5 (lower is better) Translates to: IYTGTPCSWASIPPG*GARAHGRAGGSGGW Trigger: CCATCCTCCACTACCTCCTGCCCTTCCGTGCGCTCGGGCCCCTCAGCCAGGTGGGATGGAGGCCCATGAGCAGGGTGTCCCTGTATAAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS CCA 90 bp | CTGGACATGCAGCTCAGCTGGCCTAGCCTCCGCCGTAGGGCCAGCTaGGGAAAGTACAACCATTTCGCTGCTGCTTGGAGCTCCGGTCCT | + |
Preference number: 5 (lower is better) Translates to: LDMQLSWPSLRRRAS*GKYNHFAAAWSSGP Trigger: AGGACCGGAGCTCCAAGCAGCAGCGAAATGGTTGTACTTTCCCCAGCTGGCCCTACGGCGGAGGCTAGGCCAGCTGAGCTGCATGTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS CCA 90 bp | GGCCAGGAGCGCAGTTTCAGAGCTGGTCTGGACATGCAGCTCAGCTaGCCTAGCCTCCGCCGTAGGGCCAGCTGGGGAAAGTACAACCAT | + |
Preference number: 5 (lower is better) Translates to: GQERSFRAGLDMQLS*PSLRRRASWGKYNH Trigger: ATGGTTGTACTTTCCCCAGCTGGCCCTACGGCGGAGGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCGCTCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS CCA 90 bp | GGGGCTGTTTGTGTGCAGGTCCTGGGAAGTGGCGCCGATGTGAGATaGTCCAGTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGG | + |
Preference number: 5 (lower is better) Translates to: GAVCVQVLGSGADVR*SSQWGSGSSGSLLG Trigger: CCCCAGGAGACTACCACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGGACCTGCACACAAACAGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
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CDS CCA 90 bp | CCACATTGGTGGCTCCCACTGCTGGGAAGTGGCGCCGATGTGAGATaGTCCAGTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCCTGGGG | + |
Preference number: 5 (lower is better) Translates to: PHWWLPLLGSGADVR*SSQWGSGSSGSLLG Trigger: CCCCAGGAGACTACCACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGCAGTGGGAGCCACCAATGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | CTTGGGTGCCTCGAAGATGAGCACGATGGTGGAGCCCAGGTTGAACTCCCCCAGCCATTTCGCTGCTGCTaGGAGCTCCGGTCCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: LGCLEDEHDGGAQVELPQPFRCC*ELRSWL Trigger: CAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATGG...CTGGGGGAGTTCAACCTGGGCTCCACCATCGTGCTCATCTTCGAGGCACCCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071829.12 ENSMUST00000202283.5 |
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CDS-3UTR CAA 90 bp | GTGGAGCCCAGGTTGAACTCCCCCAGGGGCTCACCCTTGCGCATGGGAATGCCCCCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: VEPRLNSPRGSPLRMGMPPKVRI*PSDGLV Trigger: GACCAGCCCATCAGATGGCAAGATCCTCACCTTTGG...GGGCATTCCCATGCGCAAGGGTGAGCCCCTGGGGGAGTTCAACCTGGGCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
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CDS-3UTR CAA 90 bp | GTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGGCCTTCAGCCTGAAGTaGAAGTCCTTGGGTGCCTCG | + |
Preference number: 5 (lower is better) Translates to: VPSRHLTLCTLREPCDGRAFSLK*KSLGAS Trigger: CGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGC...CCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS TCA 90 bp | AGAGCCCACATTGGTGGCTCCCACTGCTGGGAAGTGGCGCCGATGTaGGATGGTCCAGTCAGTGGGGGAGTGGAAGCAGTGGTAGTCTCC | + |
Preference number: 5 (lower is better) Translates to: RAHIGGSHCWEVAPM*DGPVSGGVEAVVVS Trigger: GGAGACTACCACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGCAGTGGGAGCCACCAATGTGGGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | ACAGGCAATCTTATAAGGTCAGCCCCGCAGTGCCCCTCACCCAGACAGCCTGAGCCATTTCGCTGCTGCTaGGAGCTCCGGTCCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: TGNLIRSAPQCPSPRQPEPFRCC*ELRSWL Trigger: CAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATGG...CTCAGGCTGTCTGGGTGAGGGGCACTGCGGGGCTGACCTTATAAGATTGCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CAA 90 bp | CCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGGGTTGTACCTGGGGCTGTTaGTGTGCAGGTCTCGGTCAA | + |
Preference number: 5 (lower is better) Translates to: PSRHLTLCTLREPCDGRGCTWGC*CAGLGQ Trigger: TTGACCGAGACCTGCACACAAACAGCCCCAGGTACA...ACCCCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS GCA 90 bp | CCTGTACTTCTCATACTGCCGGTACCCGGCATACCCTCCACCTGTTaGCAACAGGATGGGCACAGGGCGCAGCAGGAACAAGGATCGGAC | + |
Preference number: 5 (lower is better) Translates to: PVLLILPVPGIPSTC*QQDGHRAQQEQGSD Trigger: GTCCGATCCTTGTTCCTGCTGCGCCCTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTATGCCGGGTACCGGCAGTATGAGAAGTACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS CCA 90 bp | CATACTGCCGGTACCCGGCATACCCTCCACCTGTTGCCAACAGGATaGGCACAGGGCGCAGCAGGAACAAGGATCGGACAGGAGCAGTAT | + |
Preference number: 5 (lower is better) Translates to: HTAGTRHTLHLLPTG*AQGAAGTRIGQEQY Trigger: ATACTGCTCCTGTCCGATCCTTGTTCCTGCTGCGCCCTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTATGCCGGGTACCGGCAGTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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CDS CCA 90 bp | TGGATACGGATAGAGCCCACATTGGTGGCTCCCACTGCTGGGAAGTaGCGCCGATGTGAGATGGTCCAGTCAGTGGGGGAGTGGAAGCAG | + |
Preference number: 5 (lower is better) Translates to: WIRIEPTLVAPTAGK*RRCEMVQSVGEWKQ Trigger: CTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGCAGTGGGAGCCACCAATGTGGGCTCTATCCGTATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | GTGCCCAGCAGGCACCTCACCCTGTGCACATTGAGAGAGCCCTGTGACGGGAGGCTGAAGTTGAAGTCCTaGGGTGCCTCGAAGATGAGC | + |
Preference number: 5 (lower is better) Translates to: VPSRHLTLCTLREPCDGRLKLKS*GASKMS Trigger: GCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAG...CCTCCCGTCACAGGGCTCTCTCAATGTGCACAGGGTGAGGTGCCTGCTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | GTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGGTTTCTGAAGGAGTCACTCCATTTCGCTGCTGCTaGGAGCTCCGGTCCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: VVQLIPFPGDQLVSEGVTPFRCC*ELRSWL Trigger: CAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATGG...AGTGACTCCTTCAGAAACCAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197787.5 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CAA 90 bp | CTAGAGGGTGTGGTAGTACACAGCCAGGAGTTAGGGGTGGGAGGCTCTGGCTTGTGTACCTGGGGCTGTTaGTGTGCAGGTCCTGGGAAG | + |
Preference number: 5 (lower is better) Translates to: LEGVVVHSQELGVGGSGLCTWGC*CAGPGK Trigger: CTTCCCAGGACCTGCACACAAACAGCCCCAGGTACA...CAAGCCAGAGCCTCCCACCCCTAACTCCTGGCTGTGTACTACCACACCCTCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
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CDS-3UTR CAA 90 bp | CATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACCATACCCTCCACCTGTaGCCAACAGGATGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: HVACSRKTVDPQSVPSRHHTLHL*PTGWAQ Trigger: CTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTATG...GTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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CDS-3UTR CAA 90 bp | GCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCCCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTG | + |
Preference number: 5 (lower is better) Translates to: AMWPALGRQWIHSLCPAGPKVRI*PSDGLV Trigger: CACCAGCCCATCAGATGGCAAGATCCTCACCTTTGG...GCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202283.5 |
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CDS GCA 90 bp | TCCAAGCCCAGCTTCTCAAGCTTCCGTTCCCTGTACTTCTCATACTaGCGGTACCCGGCATACCCTCCACCTGTTGCCAACAGGATGGGC | + |
Preference number: 5 (lower is better) Translates to: SKPSFSSFRSLYFSY*RYPAYPPPVANRMG Trigger: GCCCATCCTGTTGGCAACAGGTGGAGGGTATGCCGGGTACCGGCAGTATGAGAAGTACAGGGAACGGAAGCTTGAGAAGCTGGGCTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | ATGACACAGTGGTACAGCTCATTCCCTTCCCGGGTGACCAGCTGGTTTCTGAAGCCATTTCGCTGCTGCTaGGAGCTCCGGTCCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: MTQWYSSFPSRVTSWFLKPFRCC*ELRSWL Trigger: CAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATGG...CTTCAGAAACCAGCTGGTCACCCGGGAAGGGAATGAGCTGTACCACTGTGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197787.5 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CAA 90 bp | CCTGAGAGACCCAGAACCTCTCCTCTGCACCCATGGACAGGCAATCTTATAAGGCGGATAGAGCCCACATaGGTGGCTCCCACTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: PERPRTSPLHPWTGNLIRRIEPT*VAPTAG Trigger: CCCAGCAGTGGGAGCCACCAATGTGGGCTCTATCCG...CCTTATAAGATTGCCTGTCCATGGGTGCAGAGGAGAGGTTCTGGGTCTCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | GGTCCTCTGTATTGGCTCGAGGGCCCAGGAAGGACTCCAAGGAGTAGGTTACGCCCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTG | + |
Preference number: 5 (lower is better) Translates to: GPLYWLEGPGRTPRSRLRPKVRI*PSDGLV Trigger: CACCAGCCCATCAGATGGCAAGATCCTCACCTTTGG...GCGTAACCTACTCCTTGGAGTCCTTCCTGGGCCCTCGAGCCAATACAGAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CAA 90 bp | GCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGCATACCCTCCACCTGTaGCCAACAGGATGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: AVMKAMWPALGRQWIHSLHTLHL*PTGWAQ Trigger: CTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTATG...CAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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CDS-3UTR CAA 90 bp | GAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCGGAATGCCCTCCTTGTaGGCATGTGTTACAAAGCTC | + |
Preference number: 5 (lower is better) Translates to: EGHVACSRKTVDPQSVPSGMPSL*ACVTKL Trigger: GAGCTTTGTAACACATGCCAACAAGGAGGGCATTCC...GCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | AGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCA | + |
Preference number: 5 (lower is better) Translates to: RKQTGEIGEQKAVMKAMWMVEPR*NSPRGS Trigger: TGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCAT...CCACATGGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | GGGTCAAATCACACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGGCCTTCAGCCTGAAGTaGAAGTCCTTGGGTGCCTCG | + |
Preference number: 5 (lower is better) Translates to: GSNHTHPYSEKGSRSCPEAFSLK*KSLGAS Trigger: CGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGC...CTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGTGTGATTTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | CTCTGGTCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTACCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: LWSCPYHWVPHGLHTCFLPKVRI*PSDGLV Trigger: GACCAGCCCATCAGATGGCAAGATCCTCACCTTTGG...TAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGACCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | GAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCATGGGAATGCCCTCCTaGTTGGCATGTGTTACAAAG | + |
Preference number: 5 (lower is better) Translates to: EGHVACSRKTVDPQSVPSMGMPS*LACVTK Trigger: CTTTGTAACACATGCCAACAAGGAGGGCATTCCCAT...GCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | TGGCCTGCTCTAGGAAGACAGTGGATCCACAGTCTGTGCCCAGCAGGCACCTCAATGGGAATGCCCTCCTaGTTGGCATGTGTTACAAAG | + |
Preference number: 5 (lower is better) Translates to: WPALGRQWIHSLCPAGTSMGMPS*LACVTK Trigger: CTTTGTAACACATGCCAACAAGGAGGGCATTCCCAT...TGAGGTGCCTGCTGGGCACAGACTGTGGATCCACTGTCTTCCTAGAGCAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | TGCAGGAGAAATTCATGGCATTCCCAAGATCGACATGAACTCTGGTCTTGTCCCATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCA | + |
Preference number: 5 (lower is better) Translates to: CRRNSWHSQDRHELWSCPMVEPR*NSPRGS Trigger: TGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCAT...GGGACAAGACCAGAGTTCATGTCGATCTTGGGAATGCCATGAATTTCTCCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | TCTTGTCCCTACCACTGGGTTCCCCATGGCCTGCATACCTGTTTTCTAGGTACTGCCTTCAGCCTGAAGTaGAAGTCCTTGGGTGCCTCG | + |
Preference number: 5 (lower is better) Translates to: SCPYHWVPHGLHTCFLGTAFSLK*KSLGAS Trigger: CGAGGCACCCAAGGACTTCAACTTCAGGCTGAAGGC...AGTACCTAGAAAACAGGTATGCAGGCCATGGGGAACCCAGTGGTAGGGACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS TCA 90 bp | GAGCCAGTAAGGAAGTTCTACTTGGTTGAGGCGACCACAGGCACGTaGCAGCAAACGCGTTGGCACAGATTTATACAGGGACACCCTGCT | + |
Preference number: 5 (lower is better) Translates to: EPVRKFYLVEATTGT*QQTRWHRFIQGHPA Trigger: AGCAGGGTGTCCCTGTATAAATCTGTGCCAACGCGTTTGCTGTCACGTGCCTGTGGTCGCCTCAACCAAGTAGAACTTCCTTACTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS-3UTR CAA 90 bp | GCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCATGTACCTGGGGCTGTTaGTGTGCAGGTCTCGGTCAA | + |
Preference number: 5 (lower is better) Translates to: AESSYEGHVACSRKTVDPCTWGC*CAGLGQ Trigger: TTGACCGAGACCTGCACACAAACAGCCCCAGGTACA...TGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | ACCCACCCATACTCTGAAAAGGGGTCTAGGTCCTGTCCTGAGAGACCCAGAACCGGAATGCCCTCCTTGTaGGCATGTGTTACAAAGCTC | + |
Preference number: 5 (lower is better) Translates to: THPYSEKGSRSCPERPRTGMPSL*ACVTKL Trigger: GAGCTTTGTAACACATGCCAACAAGGAGGGCATTCC...GGTTCTGGGTCTCTCAGGACAGGACCTAGACCCCTTTTCAGAGTATGGGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATAATGGTGGAGCCCAGGTaGAACTCCCCCAGGGGCTCA | + |
Preference number: 5 (lower is better) Translates to: KVYIISHCPQKTLAEPRIMVEPR*NSPRGS Trigger: TGAGCCCCTGGGGGAGTTCAACCTGGGCTCCACCAT...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | TTTTCCAGAAAGCAGACGGGTGAAATTGGGGAGCAGAAAGCAGTTATGAAGGCCCATACCCTCCACCTGTaGCCAACAGGATGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: FSRKQTGEIGEQKAVMKAHTLHL*PTGWAQ Trigger: CTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTATG...GGCCTTCATAACTGCTTTCTGCTCCCCAATTTCACCCGTCTGCTTTCTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 ENSMUST00000142957.6 |
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CDS-3UTR CAA 90 bp | GCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGTGGATCCACTGAAGTTGAAGTCCTaGGGTGCCTCGAAGATGAGC | + |
Preference number: 5 (lower is better) Translates to: AESSYEGHVACSRKTVDPLKLKS*GASKMS Trigger: GCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAG...TGGATCCACTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | CCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCTGTACCTGGGGCTGTTaGTGTGCAGGTCTCGGTCAA | + |
Preference number: 5 (lower is better) Translates to: PTKVYIISHCPQKTLAEPCTWGC*CAGLGQ Trigger: TTGACCGAGACCTGCACACAAACAGCCCCAGGTACA...GGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | ATTGGGGAGCAGAAAGCAGTTATGAAGGCCATGTGGCCTGCTCTAGGAAGACAGGGAATGCCCTCCTTGTaGGCATGTGTTACAAAGCTC | + |
Preference number: 5 (lower is better) Translates to: IGEQKAVMKAMWPALGRQGMPSL*ACVTKL Trigger: GAGCTTTGTAACACATGCCAACAAGGAGGGCATTCC...CTGTCTTCCTAGAGCAGGCCACATGGCCTTCATAACTGCTTTCTGCTCCCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS TCA 90 bp | GGCGCAGCAGGAACAAGGATCGGACAGGAGCAGTATGGAAATTTCTaGCACCTGCCTGAAGAGGCAATTTCTGTAAGGTCCCCAGAAAAT | + |
Preference number: 5 (lower is better) Translates to: GAAGTRIGQEQYGNF*HLPEEAISVRSPEN Trigger: ATTTTCTGGGGACCTTACAGAAATTGCCTCTTCAGGCAGGTGTCAGAAATTTCCATACTGCTCCTGTCCGATCCTTGTTCCTGCTGCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGCCATTTCGCTGCTGCTaGGAGCTCCGGTCCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: FLEPTKVYIISHCPQKTLPFRCC*ELRSWL Trigger: CAGCCAGGACCGGAGCTCCAAGCAGCAGCGAAATGG...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000202283.5 |
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CDS-3UTR CAA 90 bp | AAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGATACCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: KVYIISHCPQKTLAEPRIPKVRI*PSDGLV Trigger: GACCAGCCCATCAGATGGCAAGATCCTCACCTTTGG...TATCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | CAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGGCAGAGCCCAGGACTGAAGTTGAAGTCCTaGGGTGCCTCGAAGATGAGC | + |
Preference number: 5 (lower is better) Translates to: QRSTSLVIVLRRHWQSPGLKLKS*GASKMS Trigger: GCTCATCTTCGAGGCACCCAAGGACTTCAACTTCAG...TCCTGGGCTCTGCCAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061895.16 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS TCA 90 bp | AACAAGGATCGGACAGGAGCAGTATGGAAATTTCTGACACCTGCCTaGAGAGGCAATTTCTGTAAGGTCCCCAGAAAATGGCGTGTGGCA | + |
Preference number: 5 (lower is better) Translates to: NKDRTGAVWKFLTPA*RGNFCKVPRKWRVA Trigger: TGCCACACGCCATTTTCTGGGGACCTTACAGAAATTGCCTCTTCAGGCAGGTGTCAGAAATTTCCATACTGCTCCTGTCCGATCCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS-3UTR CAA 90 bp | TTCTTAGAGCCTACAAAGGTCTACATCATTAGTCATTGTCCTCAGAAGACACTGCCAAAGGTGAGGATCTaGCCATCTGATGGGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: FLEPTKVYIISHCPQKTLPKVRI*PSDGLV Trigger: GACCAGCCCATCAGATGGCAAGATCCTCACCTTTGG...CAGTGTCTTCTGAGGACAATGACTAATGATGTAGACCTTTGTAGGCTCTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061895.16 ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000142779.8 |
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CDS TCA 72 bp | GGGACACCCTGCTCATGGGCCTCCATCCCACCTGGCTaGGGGGCCCGAGCGCACGGAAGGGCAGGAGGTAGT | + |
Preference number: 6 (lower is better) Translates to: GTPCSWASIPPG*GARAHGRAGGS Trigger: ACTACCTCCTGCCCTTCCGTGCGCTCGGGCCCCTCAGCCAGGTGGGATGGAGGCCCATGAGCAGGGTGTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS CCA 72 bp | GCCCGAGCGCACGGAAGGGCAGGAGGTAGTGGAGGATaGTCAGCGGCCAGGAGCGCAGTTTCAGAGCTGGTC | + |
Preference number: 6 (lower is better) Translates to: ARAHGRAGGSGG*SAARSAVSELV Trigger: GACCAGCTCTGAAACTGCGCTCCTGGCCGCTGACCATCCTCCACTACCTCCTGCCCTTCCGTGCGCTCGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS CCA 72 bp | CGCAGTTTCAGAGCTGGTCTGGACATGCAGCTCAGCTaGCCTAGCCTCCGCCGTAGGGCCAGCTGGGGAAAG | + |
Preference number: 6 (lower is better) Translates to: RSFRAGLDMQLS*PSLRRRASWGK Trigger: CTTTCCCCAGCTGGCCCTACGGCGGAGGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS CCA 72 bp | TGGTCAGCGGCCAGGAGCGCAGTTTCAGAGCTGGTCTaGACATGCAGCTCAGCTGGCCTAGCCTCCGCCGTA | + |
Preference number: 6 (lower is better) Translates to: WSAARSAVSELV*TCSSAGLASAV Trigger: TACGGCGGAGGCTAGGCCAGCTGAGCTGCATGTCCAGACCAGCTCTGAAACTGCGCTCCTGGCCGCTGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS CCA 72 bp | CAGCTCAGCTGGCCTAGCCTCCGCCGTAGGGCCAGCTaGGGAAAGTACAACCATTTCGCTGCTGCTTGGAGC | + |
Preference number: 6 (lower is better) Translates to: QLSWPSLRRRAS*GKYNHFAAAWS Trigger: GCTCCAAGCAGCAGCGAAATGGTTGTACTTTCCCCAGCTGGCCCTACGGCGGAGGCTAGGCCAGCTGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071829.12 ENSMUST00000120591.8 ENSMUST00000135248.2 ENSMUST00000200390.5 ENSMUST00000202283.5 |
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CDS TCA 72 bp | ATTGGTGGCTCCCACTGCTGGGAAGTGGCGCCGATGTaGGATGGTCCAGTCAGTGGGGGAGTGGAAGCAGTG | + |
Preference number: 6 (lower is better) Translates to: IGGSHCWEVAPM*DGPVSGGVEAV Trigger: CACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGCAGTGGGAGCCACCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142779.8 |
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CDS GCA 72 bp | CTCATACTGCCGGTACCCGGCATACCCTCCACCTGTTaGCAACAGGATGGGCACAGGGCGCAGCAGGAACAA | + |
Preference number: 6 (lower is better) Translates to: LILPVPGIPSTC*QQDGHRAQQEQ Trigger: TTGTTCCTGCTGCGCCCTGTGCCCATCCTGTTGGCAACAGGTGGAGGGTATGCCGGGTACCGGCAGTATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |
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CDS CCA 72 bp | TGTACCTGGGGCTGTTTGTGTGCAGGTCCTGGGAAGTaGCGCCGATGTGAGATGGTCCAGTCAGTGGGGGAG | + |
Preference number: 6 (lower is better) Translates to: CTWGCLCAGPGK*RRCEMVQSVGE Trigger: CTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGGACCTGCACACAAACAGCCCCAGGTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
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CDS CCA 72 bp | ATAGAGCCCACATTGGTGGCTCCCACTGCTGGGAAGTaGCGCCGATGTGAGATGGTCCAGTCAGTGGGGGAG | + |
Preference number: 6 (lower is better) Translates to: IEPTLVAPTAGK*RRCEMVQSVGE Trigger: CTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGCAGTGGGAGCCACCAATGTGGGCTCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142779.8 |
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CDS TCA 72 bp | CTGTTTGTGTGCAGGTCCTGGGAAGTGGCGCCGATGTaGGATGGTCCAGTCAGTGGGGGAGTGGAAGCAGTG | + |
Preference number: 6 (lower is better) Translates to: LFVCRSWEVAPM*DGPVSGGVEAV Trigger: CACTGCTTCCACTCCCCCACTGACTGGACCATCTCACATCGGCGCCACTTCCCAGGACCTGCACACAAACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071829.12 |
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CDS GCA 72 bp | GGATCGGACAGGAGCAGTATGGAAATTTCTGACACCTaGTCCGCCACAGCACACCTCCACGAAGCGAGCGCA | + |
Preference number: 6 (lower is better) Translates to: GSDRSSMEISDT*SATAHLHEASA Trigger: TGCGCTCGCTTCGTGGAGGTGTGCTGTGGCGGAGCAGGTGTCAGAAATTTCCATACTGCTCCTGTCCGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142957.6 |
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CDS GCA 72 bp | AGCTTCTCAAGCTTCCGTTCCCTGTACTTCTCATACTaGCGGTACCCGGCATACCCTCCACCTGTTGCCAAC | + |
Preference number: 6 (lower is better) Translates to: SFSSFRSLYFSY*RYPAYPPPVAN Trigger: GTTGGCAACAGGTGGAGGGTATGCCGGGTACCGGCAGTATGAGAAGTACAGGGAACGGAAGCTTGAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061895.16 ENSMUST00000142779.8 |