Pregenerated sensors for PIRT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048070Ensembl transcript IDs: ENSMUST00000123434.3
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGACTCAGTCAGCAATGCTGCTAGGTTGTATGAGGGTGAAGCCCTaGGCTCTATCCTGTCCACAGGGCCAAGAGGAGGGTTTGCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: ETQSAMLLGCMRVKP*ALSCPQGQEEGLPG Trigger: TCCAGGCAAACCCTCCTCTTGGCCCTGTGGACAGGATAGAGCTCAGGGCTTCACCCTCATACAACCTAGCAGCATTGCTGACTGAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | GCCCTGAGCTCTATCCTGTCCACAGGGCCAAGAGGAGGGTTTGCCTaGATCAACTTTGTGGTACCCGAAGAGAAGGTAGGAGGCTGCTTA | + |
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Preference number: 1 (lower is better) Translates to: ALSSILSTGPRGGFA*INFVVPEEKVGGCL Trigger: TAAGCAGCCTCCTACCTTCTCTTCGGGTACCACAAAGTTGATCCAGGCAAACCCTCCTCTTGGCCCTGTGGACAGGATAGAGCTCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR TCA 90 bp | CATGCACACATTGCCCTTGGCAGAGAGAATGGGATGGCTGATGGCTaGATGCAGGTGCCAGGGATGAGGGTAATGAAAGTATCCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: HAHIALGRENGMADG*MQVPGMRVMKVSKG Trigger: GCCCTTGGATACTTTCATTACCCTCATCCCTGGCACCTGCATTCAGCCATCAGCCATCCCATTCTCTCTGCCAAGGGCAATGTGTGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | TCCTGCAGACCTAAGGAGCTTGGTTACAGAGTGAAAGTTCTGGCTTaGGCCAGCAGAGTCTCTGAGGCTGCCTGGGACTGTCAGAATGAA | + |
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Preference number: 1 (lower is better) Translates to: SCRPKELGYRVKVLA*ASRVSEAAWDCQNE Trigger: TTCATTCTGACAGTCCCAGGCAGCCTCAGAGACTCTGCTGGCCCAAGCCAGAACTTTCACTCTGTAACCAAGCTCCTTAGGTCTGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR GCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATaGATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: PPSSQSSRKDASEEP*MKLALFLFSLAALL Trigger: CAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR TCA 90 bp | TTCCTAGCATGCACACATTGCCCTTGGCAGAGAGAATGGGATGGCTaGTGGCTGAATGCAGGTGCCAGGGATGAGGGTAATGAAAGTATC | + |
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Preference number: 1 (lower is better) Translates to: FLACTHCPWQREWDG*WLNAGARDEGNESI Trigger: GATACTTTCATTACCCTCATCCCTGGCACCTGCATTCAGCCATCAGCCATCCCATTCTCTCTGCCAAGGGCAATGTGTGCATGCTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR TCA 90 bp | TGTCCCATCCAAGGAGGGAGCCAAGGCTGTCAAACCCAATGGGACTaGAGTCAGCCTTATCTGCTTGGTCACTTTTGGTTCCAGAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: CPIQGGSQGCQTQWD*SQPYLLGHFWFQKD Trigger: ATCCTTCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGACTTCAGTCCCATTGGGTTTGACAGCCTTGGCTCCCTCCTTGGATGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | GAAGAGCGACAGAAGCCCGTAATACAGTCCGGTGGGATGGTGCTGTaGATGTTGCTCTTGTCTTCTGAGATGACTGAAATCACTACCCAG | + |
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Preference number: 1 (lower is better) Translates to: EERQKPVIQSGGMVL*MLLLSSEMTEITTQ Trigger: CTGGGTAGTGATTTCAGTCATCTCAGAAGACAAGAGCAACATCCACAGCACCATCCCACCGGACTGTATTACGGGCTTCTGTCGCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR GCA 90 bp | TTCACTTTGCTACTAGGTACCTTCCTCTGCTCTCTGGCCTGGCCTTaGCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: FTLLLGTFLCSLAWP*LEQLWKFLIGARSF Trigger: AAAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCCAGAGAGCAGAGGAAGGTACCTAGTAGCAAAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | GCTAACTTCCTTCACTGTATAAGTTCCAGACTACTCCCAGAGGAATaGTTTACTCTAGACAGTGTTTCCCTCACCCCCAGCCCCATCACT | + |
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Preference number: 1 (lower is better) Translates to: ANFLHCISSRLLPEE*FTLDSVSLTPSPIT Trigger: AGTGATGGGGCTGGGGGTGAGGGAAACACTGTCTAGAGTAAACCATTCCTCTGGGAGTAGTCTGGAACTTATACAGTGAAGGAAGTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | CCAAGGCTGTCAAACCCAATGGGACTGAAGTCAGCCTTATCTGCTTaGTCACTTTTGGTTCCAGAAGGATGTAGATGGGAATCTAAGATC | + |
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Preference number: 1 (lower is better) Translates to: PRLSNPMGLKSALSA*SLLVPEGCRWESKI Trigger: GATCTTAGATTCCCATCTACATCCTTCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGACTTCAGTCCCATTGGGTTTGACAGCCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | AGACCACAGATTCATTCTGGAATGTTCTTTCTTCAGGTTAAGTTCTaGGTCTCTGTATTGGACTTGTGGGATCCCTCTGCACCACCATCG | + |
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Preference number: 1 (lower is better) Translates to: RPQIHSGMFFLQVKF*VSVLDLWDPSAPPS Trigger: CGATGGTGGTGCAGAGGGATCCCACAAGTCCAATACAGAGACCCAGAACTTAACCTGAAGAAAGAACATTCCAGAATGAATCTGTGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR TCA 90 bp | GTGGGCAGGGGTGAAGGCAGCCTTGGAATGCCTGGTAGAGAAGAATaGATGAACATGGCAGGTACTTTTAAACAGAATACAGTTCAATAC | + |
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Preference number: 1 (lower is better) Translates to: VGRGEGSLGMPGREE*MNMAGTFKQNTVQY Trigger: GTATTGAACTGTATTCTGTTTAAAAGTACCTGCCATGTTCATTCATTCTTCTCTACCAGGCATTCCAAGGCTGCCTTCACCCCTGCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | TTTGTTAGATCCATGTGTTCCCATGGCCACCCTAAGAACTCAGTATaGAGTATTGCCAGTTGGCTTGGCCATGTTTTTCCCTCTTTCACT | + |
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Preference number: 1 (lower is better) Translates to: FVRSMCSHGHPKNSV*SIASWLGHVFPSFT Trigger: AGTGAAAGAGGGAAAAACATGGCCAAGCCAACTGGCAATACTCCATACTGAGTTCTTAGGGTGGCCATGGGAACACATGGATCTAACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR TCA 90 bp | AAAGGCATTCTGCAAGAAGCGCATTGGAGGATCAAGGGGAAGTGTTaGTACCTCTTAGCCTGCATATTGCCTCTTGTGCCAATATCATAT | + |
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Preference number: 1 (lower is better) Translates to: KGILQEAHWRIKGKC*YLLACILPLVPISY Trigger: ATATGATATTGGCACAAGAGGCAATATGCAGGCTAAGAGGTATCAACACTTCCCCTTGATCCTCCAATGCGCTTCTTGCAGAATGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR TCA 90 bp | GCAGGGGTGAAGGCAGCCTTGGAATGCCTGGTAGAGAAGAATGAATaGACATGGCAGGTACTTTTAAACAGAATACAGTTCAATACGACA | + |
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Preference number: 1 (lower is better) Translates to: AGVKAALECLVEKNE*TWQVLLNRIQFNTT Trigger: TGTCGTATTGAACTGTATTCTGTTTAAAAGTACCTGCCATGTTCATTCATTCTTCTCTACCAGGCATTCCAAGGCTGCCTTCACCCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | TCAGCCTTATCTGCTTGGTCACTTTTGGTTCCAGAAGGATGTAGATaGGAATCTAAGATCAGGCACACAACCGTAACATACAAGTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SALSAWSLLVPEGCR*ESKIRHTTVTYKFS Trigger: GGAGAACTTGTATGTTACGGTTGTGTGCCTGATCTTAGATTCCCATCTACATCCTTCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CCA 90 bp | AGAGATGTGGTGGGGAAGGAAGTTAGAACAAAGAGCATTTGTTCTTaGCTAATTGCTAATATAAAGGCATTCTGCAAGAAGCGCATTGGA | + |
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Preference number: 1 (lower is better) Translates to: RDVVGKEVRTKSICS*LIANIKAFCKKRIG Trigger: TCCAATGCGCTTCTTGCAGAATGCCTTTATATTAGCAATTAGCCAAGAACAAATGCTCTTTGTTCTAACTTCCTTCCCCACCACATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAGACAATGAGCTCTCAGGACAATGAGGTGCATGGGGTGCGGATTCCACCCCAGGGTTGGTCCTaGGCTGCCTGTATTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CAQTMSSQDNEVHGVRIPPQGWS*AACIQG Trigger: TCCCTGAATACAGGCAGCTCAGGACCAACCCTGGGG...TGGAATCCGCACCCCATGCACCTCATTGTCCTGAGAGCTCATTGTCTGGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR GCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAACTAGGTACCTTCCTCTaGTCTCTGGCCTGGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PPSSQSSRKDASEEPCMKLGTFL*SLAWPC Trigger: GCAAGGCCAGGCCAGAGAGCAGAGGAAGGTACCTAG...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR GCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAGTCTTCCCACAGCTGTaGCCAGACAATGAGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PPSSQSSRKDASEEPCMKVFPQL*PDNELS Trigger: TGAGAGCTCATTGTCTGGGCACAGCTGTGGGAAGAC...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAATACAGGTCACATCTGTaGCCTCCCGTCCTTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PPSSQSSRKDASEEPCMKYRSHL*PPVLLF Trigger: GAACAGAAGGACGGGAGGCCACAGATGTGACCTGTA...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAGATGACATCAGAGACTaGGTCTGGCTGTTCCCAACC | + |
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Preference number: 2 (lower is better) Translates to: PPSSQSSRKDASEEPCMKDDIRD*VWLFPT Trigger: GGTTGGGAACAGCCAGACCCAGTCTCTGATGTCATC...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | CCCCACCCTGTCTCTTTCCCCTTAGCTTCTCCACATGCAAGGCAGTaGCTGACTACCTTGCACATCTTGCTCATTCCAAACACTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PHPVSFPLASPHARQ*LTTLHILLIPNTSF Trigger: GAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGCCTTGCATGTGGAGAAGCTAAGGGGAAAGAGACAGGGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | AGGTACCTTCCTCTGCTCTCTGGCCTGGCCTTGCCTGGAACAGCTTaGGAAATTTCTTATAGGTGCCCGGTCTTTTGCCTAAAGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RYLPLLSGLALPGTA*EISYRCPVFCLKVS Trigger: AGACACCTTTAGGCAAAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCCAGAGAGCAGAGGAAGGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | AGGATGAAGAGTCAACCTGAACCAATGCAGCTCTTGTCATTCACTTaGCTACTAGGTACCTTCCTCTGCTCTCTGGCCTGGCCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RMKSQPEPMQLLSFT*LLGTFLCSLAWPCL Trigger: CAGGCAAGGCCAGGCCAGAGAGCAGAGGAAGGTACCTAGTAGCAAAGTGAATGACAAGAGCTGCATTGGTTCAGGTTGACTCTTCATCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAGACAATGAGCTCTCAGGACAATGAGGTGCATGGGGTGCGGATTCCACATATTCAGAAGGGGTaGACATGGTCTCCAGAAATC | + |
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Preference number: 2 (lower is better) Translates to: CAQTMSSQDNEVHGVRIPHIQKG*TWSPEI Trigger: GATTTCTGGAGACCATGTTCACCCCTTCTGAATATG...TGGAATCCGCACCCCATGCACCTCATTGTCCTGAGAGCTCATTGTCTGGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | CGACAGAAGCCCGTAATACAGTCCGGTGGGATGGTGCTGTGGATGTaGCTCTTGTCTTCTGAGATGACTGAAATCACTACCCAGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: RQKPVIQSGGMVLWM*LLSSEMTEITTQNA Trigger: AGCATTCTGGGTAGTGATTTCAGTCATCTCAGAAGACAAGAGCAACATCCACAGCACCATCCCACCGGACTGTATTACGGGCTTCTGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTCAAACCCAATGGGACTaGAGTCAGCCTTATCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: GLALPGTALEISYRCPVFQTQWD*SQPYLL Trigger: AAGCAGATAAGGCTGACTTCAGTCCCATTGGGTTTG...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTCTCAGTATGGAGTATTaGCAGTTGGCTTGGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: GLALPGTALEISYRCPVFLSMEY*QLAWPC Trigger: ACATGGCCAAGCCAACTGGCAATACTCCATACTGAG...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAGACGCAGAGATGTGGTaGGGAAGGAAGTTAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: PPSSQSSRKDASEEPCMKDAEMW*GRKLEQ Trigger: TTGTTCTAACTTCCTTCCCCACCACATCTCTGCGTC...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCAGACAATGAGCTCTCAGGACAATGAGGTGCATGGGGTGCGGATTCCATGCCTGGAACAGCTTTaGAAATTTCTTATAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: CAQTMSSQDNEVHGVRIPCLEQL*KFLIGA Trigger: GGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCA...TGGAATCCGCACCCCATGCACCTCATTGTCCTGAGAGCTCATTGTCTGGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTAGGTTAGGTCTTGATTaGCAGGAGAAGGAGATGATC | + |
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Preference number: 2 (lower is better) Translates to: GLALPGTALEISYRCPVFRLGLD*QEKEMI Trigger: GATCATCTCCTTCTCCTGTCAATCAAGACCTAACCT...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTCATACAAGTTCTCCTTaGGAATGTAGTCAACCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GLALPGTALEISYRCPVFHTSSP*ECSQPP Trigger: TGGGGGTTGACTACATTCCCAAGGAGAACTTGTATG...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | AAGCCCGTAATACAGTCCGGTGGGATGGTGCTGTGGATGTTGCTCTaGTCTTCTGAGATGACTGAAATCACTACCCAGAATGCTTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: KPVIQSGGMVLWMLL*SSEMTEITTQNALL Trigger: CAACAAAGCATTCTGGGTAGTGATTTCAGTCATCTCAGAAGACAAGAGCAACATCCACAGCACCATCCCACCGGACTGTATTACGGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTTGCCTAAAGGTGTCTTGGTGCACACATTGCCCTTaGCAGAGAGAATGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: TALEISYRCPVFCLKVSWCTHCP*QREWDG Trigger: GCCATCCCATTCTCTCTGCCAAGGGCAATGTGTGCA...CCAAGACACCTTTAGGCAAAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTTCAGCCTTATCTGCTTaGTCACTTTTGGTTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GLALPGTALEISYRCPVFSALSA*SLLVPE Trigger: TTCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGA...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | GCCATGCATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTGAGAAAGTAGACGCAGAGATGTaGTGGGGAAGGAAGTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: AMHETGSVFILPGSPLEKVDAEM*WGRKLE Trigger: TTCTAACTTCCTTCCCCACCACATCTCTGCGTCTAC...TTTCTCAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGATATCTGGAGACCTGTTGGAGGTTGTTTGCCATAGTGTTCCCAAATGCTGGCCTGGCCTTGCCTaGAACAGCTTTGGAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: VEISGDLLEVVCHSVPKCWPGLA*NSFGNF Trigger: GAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCCA...GCATTTGGGAACACTATGGCAAACAACCTCCAACAGGTCTCCAGATATCTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | GATCCATGTGTTCCCATGGCCACCCTAAGAACTCAGTATGGAGTATaGCCAGTTGGCTTGGCCATGTTTTTCCCTCTTTCACTTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: DPCVPMATLRTQYGV*PVGLAMFFPLSLLE Trigger: TTCCAAAAGTGAAAGAGGGAAAAACATGGCCAAGCCAACTGGCAATACTCCATACTGAGTTCTTAGGGTGGCCATGGGAACACATGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | TTAGCTTCTCCACATGCAAGGCAGTTGCTGACTACCTTGCACATCTaGCTCATTCCAAACACTTCCTTCCCCTTCATATTCAGAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LASPHARQLLTTLHI*LIPNTSFPFIFRRG Trigger: ACCCCTTCTGAATATGAAGGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGCCTTGCATGTGGAGAAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | TCTTTCCCCTTAGCTTCTCCACATGCAAGGCAGTTGCTGACTACCTaGCACATCTTGCTCATTCCAAACACTTCCTTCCCCTTCATATTC | + |
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Preference number: 2 (lower is better) Translates to: SFPLASPHARQLLTT*HILLIPNTSFPFIF Trigger: GAATATGAAGGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGCCTTGCATGTGGAGAAGCTAAGGGGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR GCA 90 bp | GCCATGCATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTGAGAAAAATCACTACCCAGAATaGTTTGTTGCAGAGACACGG | + |
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Preference number: 2 (lower is better) Translates to: AMHETGSVFILPGSPLEKNHYPE*FVAETR Trigger: CCGTGTCTCTGCAACAAAGCATTCTGGGTAGTGATT...TTTCTCAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | TCAAACCCAATGGGACTGAAGTCAGCCTTATCTGCTTGGTCACTTTaGGTTCCAGAAGGATGTAGATGGGAATCTAAGATCAGGCACACA | + |
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Preference number: 2 (lower is better) Translates to: SNPMGLKSALSAWSL*VPEGCRWESKIRHT Trigger: TGTGTGCCTGATCTTAGATTCCCATCTACATCCTTCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGACTTCAGTCCCATTGGGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR CAA 90 bp | CTAGACAGTGTTTCCCTCACCCCCAGCCCCATCACTGTCCAGATTTaGGAATGTGTGATACATGAGACATATCCTTTCTCTTGTAATGTT | + |
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Preference number: 2 (lower is better) Translates to: LDSVSLTPSPITVQI*ECVIHETYPFSCNV Trigger: AACATTACAAGAGAAAGGATATGTCTCATGTATCACACATTCCAAAATCTGGACAGTGATGGGGCTGGGGGTGAGGGAAACACTGTCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR GCA 90 bp | CATTTGTTAGATCCATGTGTTCCCATGGCCACCCTAAGAACTCAGTATGGAGTAGAGAAGGTAGGAGGCTaGTTATTGGTTAGCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: HLLDPCVPMATLRTQYGVEKVGG*LLVSRS Trigger: AGATCTGCTAACCAATAAGCAGCCTCCTACCTTCTC...TACTCCATACTGAGTTCTTAGGGTGGCCATGGGAACACATGGATCTAACAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTTGCCTAAAGGTGTCTTGGAAGAATTTCCTAGCATaGACACATTGCCCTTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TALEISYRCPVFCLKVSWKNFLA*THCPWQ Trigger: CTGCCAAGGGCAATGTGTGCATGCTAGGAAATTCTT...CCAAGACACCTTTAGGCAAAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATAGAGAATGGGATGGCTaGTGGCTGAATGCAGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNREWDG*WLNAGA Trigger: GGCACCTGCATTCAGCCATCAGCCATCCCATTCTCT...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR TCA 90 bp | CATTTGTTAGATCCATGTGTTCCCATGGCCACCCTAAGAACTCAGTATGGAGTACTTTTGGAAATAAGATaGCATCAGAGACTGGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLLDPCVPMATLRTQYGVLLEIR*HQRLGL Trigger: CAGACCCAGTCTCTGATGTCATCTTATTTCCAAAAG...TACTCCATACTGAGTTCTTAGGGTGGCCATGGGAACACATGGATCTAACAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGCATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTGAGAAATGTGTGTGTGTGTGTTaGTTCCACAAAACAAATACT | + |
|
Preference number: 2 (lower is better) Translates to: AMHETGSVFILPGSPLEKCVCVC*FHKTNT Trigger: AGTATTTGTTTTGTGGAATCAACACACACACACACA...TTTCTCAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATCCCGTCCTTCTGTTCTaGAGCTGTGTAGACGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNPVLLF*SCVDAE Trigger: CTCTGCGTCTACACAGCTCCAGAACAGAAGGACGGG...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 90 bp | ACTTTGATTTGCATTTGGAGCATCTCTCCTGAACCTAGTCTCTGCTaGCTTCATCCAGACCACAGATTCATTCTGGAATGTTCTTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TLICIWSISPEPSLC*LHPDHRFILECSFF Trigger: GAAGAAAGAACATTCCAGAATGAATCTGTGGTCTGGATGAAGCAAGCAGAGACTAGGTTCAGGAGAGATGCTCCAAATGCAAATCAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR GCA 90 bp | GCCATGCATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTGAGAAAAACTCAATAAATACTTaGTTGTTTGGTAGGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: AMHETGSVFILPGSPLEKNSINT*LFGREE Trigger: TTCCTCCCTACCAAACAAGCAAGTATTTATTGAGTT...TTTCTCAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATTTGACCCCAGAAGCCTaGAGTGTACCAAGGAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNLTPEA*SVPRSS Trigger: GCTACTCCTTGGTACACTGCAGGCTTCTGGGGTCAA...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGGAAGGAAGTTAGAACAAAGAGCATTTGTTCTTGGCTAATTGCTAATATAAGAGGAGGGTTTGCCTaGATCAACTTTGTGGTACCC | + |
|
Preference number: 2 (lower is better) Translates to: VGKEVRTKSICSWLIANIRGGFA*INFVVP Trigger: GGGTACCACAAAGTTGATCCAGGCAAACCCTCCTCT...TATATTAGCAATTAGCCAAGAACAAATGCTCTTTGTTCTAACTTCCTTCCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATTACAGTCCGGTGGGATaGTGCTGTGGATGTTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNYSPVG*CCGCCS Trigger: AGAGCAACATCCACAGCACCATCCCACCGGACTGTA...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATGCTATGGAAACCAGGTaGGACTCAGTCAGCAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNAMETR*DSVSNA Trigger: AGCATTGCTGACTGAGTCTCACCTGGTTTCCATAGC...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATATCAAGGGGAAGTGTTaGTACCTCTTAGCCTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNIKGKC*YLLACI Trigger: TATGCAGGCTAAGAGGTATCAACACTTCCCCTTGAT...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATACTATAATGAAGTTTTaGGGGTACTTACCTCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNTIMKF*GYLPLG Trigger: CCCAAGAGGTAAGTACCCTCAAAACTTCATTATAGT...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | TACAGGTCACATCTGTGGCCTCCCGTCCTTCTGTTCTaGAGCTGTGTAGACGCAGAGATGTGGTGGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YRSHLWPPVLLF*SCVDAEMWWGR Trigger: CCTTCCCCACCACATCTCTGCGTCTACACAGCTCCAGAACAGAAGGACGGGAGGCCACAGATGTGACCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | GAGCTGGCTGTGAGCTCATCTGTGTGTTCCCTTTCATaGAGGCACAGAAGATTGAGAGGCTCCACCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ELAVSSSVCSLS*RHRRLRGSTPG Trigger: CCCTGGGGTGGAGCCTCTCAATCTTCTGTGCCTTCATGAAAGGGAACACACAGATGAGCTCACAGCCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | AGGTGCATGGGGTGCGGATTCCAAGTGAGCTGGCTGTaGGCTCATCTGTGTGTTCCCTTTCATGAAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RCMGCGFQVSWL*AHLCVPFHEGT Trigger: TGTGCCTTCATGAAAGGGAACACACAGATGAGCTCACAGCCAGCTCACTTGGAATCCGCACCCCATGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | GTCCTTCCTGCAGACCTAAGGAGCTTGGTTACAGAGTaGAAGTTCTGGCTTGGGCCAGCAGAGTCTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VLPADLRSLVTE*KFWLGPAESLR Trigger: CCTCAGAGACTCTGCTGGCCCAAGCCAGAACTTTCACTCTGTAACCAAGCTCCTTAGGTCTGCAGGAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR GCA 72 bp | GAGCTCTATCCTGTCCACAGGGCCAAGAGGAGGGTTTaGCTGGATCAACTTTGTGGTACCCGAAGAGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ELYPVHRAKRRV*LDQLCGTRREG Trigger: ACCTTCTCTTCGGGTACCACAAAGTTGATCCAGGCAAACCCTCCTCTTGGCCCTGTGGACAGGATAGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR GCA 72 bp | GTAGGCAAGAGAGGATGGAATAGCATCCGGGAGCTATaGGGAATCCTAACCCCACCCTGTCTCTTTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VGKRGWNSIREL*GILTPPCLFPL Trigger: AAGGGGAAAGAGACAGGGTGGGGTTAGGATTCCGCATAGCTCCCGGATGCTATTCCATCCTCTCTTGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCCCGTCCTTCTGTTCTGGAGCTGTGTAGACGCAGAGATGTGGTGGGGAAGTCTGCTTGGTCACTTTaGGTTCCAGAAGGATGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASRPSVLELCRRRDVVGKSAWSL*VPEGCR Trigger: TCTACATCCTTCTGGAACCAAAAGTGACCAAGCAGA...CTTCCCCACCACATCTCTGCGTCTACACAGCTCCAGAACAGAAGGACGGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGACAATGAGCTCTCAGGACAATGAGGTGCATGGGGTGCGGATTCCAACTCAGTATGGAGTATaGCCAGTTGGCTTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: CAQTMSSQDNEVHGVRIPTQYGV*PVGLAM Trigger: CATGGCCAAGCCAACTGGCAATACTCCATACTGAGT...TGGAATCCGCACCCCATGCACCTCATTGTCCTGAGAGCTCATTGTCTGGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | AGGGCTGTCCTTCCATGTCAGGAGAAAGGAGTGGTCTaGAAGCCCTGTCATGGAGGCATTAGACATTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAVLPCQEKGVV*KPCHGGIRHSW Trigger: CCACGAATGTCTAATGCCTCCATGACAGGGCTTTCAGACCACTCCTTTCTCCTGACATGGAAGGACAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | CATCTGTGTGTTCCCTTTCATGAAGGCACAGAAGATTaGGAGGCTCCACCCCAGGGCTGTCCTTCCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLCVPFHEGTED*EAPPQGCPSMS Trigger: TGACATGGAAGGACAGCCCTGGGGTGGAGCCTCTCAATCTTCTGTGCCTTCATGAAAGGGAACACACAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTCCTAGCATGCACACATaGCCCTTGGCAGAGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: GLALPGTALEISYRCPVFPSMHT*PLAERM Trigger: CATTCTCTCTGCCAAGGGCAATGTGTGCATGCTAGG...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTGTCAGCCTTATCTGCTaGGTCACTTTTGGTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GLALPGTALEISYRCPVFVSLIC*VTFGSR Trigger: TCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGAC...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAATGGAGTATTGCCAGTaGGCTTGGCCATGTTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPSSQSSRKDASEEPCMKMEYCQ*AWPCFS Trigger: GGAAAAACATGGCCAAGCCAACTGGCAATACTCCAT...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | CTGCAAGAAGCGCATTGGAGGATCAAGGGGAAGTGTTaGTACCTCTTAGCCTGCATATTGCCTCTTGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQEAHWRIKGKC*YLLACILPLVP Trigger: TGGCACAAGAGGCAATATGCAGGCTAAGAGGTATCAACACTTCCCCTTGATCCTCCAATGCGCTTCTTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | CAGAAGCCCGTAATACAGTCCGGTGGGATGGTGCTGTaGATGTTGCTCTTGTCTTCTGAGATGACTGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: QKPVIQSGGMVL*MLLLSSEMTEI Trigger: GATTTCAGTCATCTCAGAAGACAAGAGCAACATCCACAGCACCATCCCACCGGACTGTATTACGGGCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTGCTGACTACCTTGCACATCTTGCTCATTCCAAACACTTCCTTCCCCTTTTGCCTGGATCAACTTaGTGGTACCCGAAGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AVADYLAHLAHSKHFLPLLPGST*WYPKRR Trigger: CCTTCTCTTCGGGTACCACAAAGTTGATCCAGGCAA...AAGGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAGATATCTGGAGACCTGTTGGAGGTTGTTTGCCATAGTGTTCCCAAATGCCCACATGCAAGGCAGTaGCTGACTACCTTGCACATC | + |
|
Preference number: 3 (lower is better) Translates to: VEISGDLLEVVCHSVPKCPHARQ*LTTLHI Trigger: GATGTGCAAGGTAGTCAGCAACTGCCTTGCATGTGG...GCATTTGGGAACACTATGGCAAACAACCTCCAACAGGTCTCCAGATATCTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR GCA 72 bp | TCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATaGATGAAACTGGCTCTGTTTTTATTCTCCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQSSRKDASEEP*MKLALFLFSLA Trigger: TGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | TGTTCTTTCTTCAGGTTAAGTTCTGGGTCTCTGTATTaGACTTGTGGGATCCCTCTGCACCACCATCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CSFFRLSSGSLY*TCGIPLHHHRL Trigger: GAGACGATGGTGGTGCAGAGGGATCCCACAAGTCCAATACAGAGACCCAGAACTTAACCTGAAGAAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAGAACCAATGCAGCTCTaGTCATTCACTTTGCTACTA | + |
|
Preference number: 3 (lower is better) Translates to: PPSSQSSRKDASEEPCMKEPMQL*SFTLLL Trigger: TAGTAGCAAAGTGAATGACAAGAGCTGCATTGGTTC...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGGCCTTGCCTGGAACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTATCACTGTCCAGATTTaGGAATGTGTGATACATGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLALPGTALEISYRCPVFITVQI*ECVIHE Trigger: CTCATGTATCACACATTCCAAAATCTGGACAGTGAT...AAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAGACTATAATGAAGTTTaGAGGGTACTTACCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PPSSQSSRKDASEEPCMKDYNEV*RVLTSW Trigger: CCAAGAGGTAAGTACCCTCAAAACTTCATTATAGTC...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR GCA 72 bp | ATCAACTTTGTGGTACCCGAAGAGAAGGTAGGAGGCTaGTTATTGGTTAGCAGATCTTCTGGACAACCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: INFVVPEEKVGG*LLVSRSSGQPV Trigger: GACTGGTTGTCCAGAAGATCTGCTAACCAATAAGCAGCCTCCTACCTTCTCTTCGGGTACCACAAAGTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | GTCCTTCTGTTCTGGAGCTGTGTAGACGCAGAGATGTaGTGGGGAAGGAAGTTAGAACAAAGAGCATTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLLFWSCVDAEM*WGRKLEQRAFV Trigger: AACAAATGCTCTTTGTTCTAACTTCCTTCCCCACCACATCTCTGCGTCTACACAGCTCCAGAACAGAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | GGCCACCCTAAGAACTCAGTATGGAGTATTGCCAGTTaGCTTGGCCATGTTTTTCCCTCTTTCACTTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GHPKNSVWSIAS*LGHVFPSFTFG Trigger: TCCAAAAGTGAAAGAGGGAAAAACATGGCCAAGCCAACTGGCAATACTCCATACTGAGTTCTTAGGGTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAGATATCTGGAGACCTGTTGGAGGTTGTTTGCCATAGTGTTCCCAAATGCCTCTTGTCATTCACTTaGCTACTAGGTACCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VEISGDLLEVVCHSVPKCLLSFT*LLGTFL Trigger: GAGGAAGGTACCTAGTAGCAAAGTGAATGACAAGAG...GCATTTGGGAACACTATGGCAAACAACCTCCAACAGGTCTCCAGATATCTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | TCAAACCCAATGGGACTGAAGTCAGCCTTATCTGCTTaGTCACTTTTGGTTCCAGAAGGATGTAGATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SNPMGLKSALSA*SLLVPEGCRWE Trigger: TTCCCATCTACATCCTTCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGACTTCAGTCCCATTGGGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGCATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTGAGAAATATCTTCCTGTACATTaGTTAGATCCATGTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AMHETGSVFILPGSPLEKYLPVH*LDPCVP Trigger: GGGAACACATGGATCTAACAAATGTACAGGAAGATA...TTTCTCAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGCATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTGAGAAAATGAGGCAATGGTCTTaGGCAAAATTTTCCAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: AMHETGSVFILPGSPLEKMRQWS*AKFSKM Trigger: CATCTTGGAAAATTTTGCCAAAGACCATTGCCTCAT...TTTCTCAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | TCCTGGCATCGTGATTATCCCCAAACTCCCTTCTGTTaGGACATACTTGAAAGTGAGATCTGCAAAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SWHRDYPQTPFC*DILESEICKGL Trigger: AAGACCTTTGCAGATCTCACTTTCAAGTATGTCTCAACAGAAGGGAGTTTGGGGATAATCACGATGCCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | GAGGAGAGTAAGCTCCAAATGGATCCTTTCCTACTTTaGTTTGCATTTGGAGCATCTCTCCTGAACCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EESKLQMDPFLL*FAFGASLLNLV Trigger: GACTAGGTTCAGGAGAGATGCTCCAAATGCAAATCAAAGTAGGAAAGGATCCATTTGGAGCTTACTCTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | TCTGCTTGGTCACTTTTGGTTCCAGAAGGATGTAGATaGGAATCTAAGATCAGGCACACAACCGTAACATAC | + |
|
Preference number: 3 (lower is better) Translates to: SAWSLLVPEGCR*ESKIRHTTVTY Trigger: GTATGTTACGGTTGTGTGCCTGATCTTAGATTCCCATCTACATCCTTCTGGAACCAAAAGTGACCAAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | AAGTACTGTGAATGGTTGAGATATCTGGAGACCTGTTaGAGGTTGTTTGCCATAGTGTTCCCAAATGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KYCEWLRYLETC*RLFAIVFPNAQ Trigger: TTGGGCATTTGGGAACACTATGGCAAACAACCTCCAACAGGTCTCCAGATATCTCAACCATTCACAGTACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | GAGGAATGTCCCACAATGCAACAGGAACAAAGGTGGTaGATTCTAACTGCCTATAGAAGTACTGTGAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: EECPTMQQEQRW*ILTAYRSTVNG Trigger: ACCATTCACAGTACTTCTATAGGCAGTTAGAATCCACCACCTTTGTTCCTGTTGCATTGTGGGACATTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | TCCGAGGAATGTCCCACAATGCAACAGGAACAAAGGTaGTGGATTCTAACTGCCTATAGAAGTACTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SEECPTMQQEQR*WILTAYRSTVN Trigger: ATTCACAGTACTTCTATAGGCAGTTAGAATCCACCACCTTTGTTCCTGTTGCATTGTGGGACATTCCTCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | GCTCCAAATGGATCCTTTCCTACTTTGATTTGCATTTaGAGCATCTCTCCTGAACCTAGTCTCTGCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: APNGSFPTLICI*SISPEPSLCLL Trigger: AAGCAAGCAGAGACTAGGTTCAGGAGAGATGCTCCAAATGCAAATCAAAGTAGGAAAGGATCCATTTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGGAAGGAAGTTAGAACAAAGAGCATTTGTTCTTGGCTAATTGCTAATATATCTGCAAGAAGCGCATaGGAGGATCAAGGGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VGKEVRTKSICSWLIANISARSA*EDQGEV Trigger: CACTTCCCCTTGATCCTCCAATGCGCTTCTTGCAGA...TATATTAGCAATTAGCCAAGAACAAATGCTCTTTGTTCTAACTTCCTTCCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | TCGGACATGGCATTCAATTTCAGGTTAGGTCTTGATTaGCAGGAGAAGGAGATGATCTTACAGGTCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: SDMAFNFRLGLD*QEKEMILQVTS Trigger: AGATGTGACCTGTAAGATCATCTCCTTCTCCTGTCAATCAAGACCTAACCTGAAATTGAATGCCATGTCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | GGTGAAGGCAGCCTTGGAATGCCTGGTAGAGAAGAATaGATGAACATGGCAGGTACTTTTAAACAGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: GEGSLGMPGREE*MNMAGTFKQNT Trigger: TGTATTCTGTTTAAAAGTACCTGCCATGTTCATTCATTCTTCTCTACCAGGCATTCCAAGGCTGCCTTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | ATTCATTCTGGAATGTTCTTTCTTCAGGTTAAGTTCTaGGTCTCTGTATTGGACTTGTGGGATCCCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IHSGMFFLQVKF*VSVLDLWDPSA Trigger: TGCAGAGGGATCCCACAAGTCCAATACAGAGACCCAGAACTTAACCTGAAGAAAGAACATTCCAGAATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAGATATCTGGAGACCTGTTGGAGGTTGTTTGCCATAGTGTTCCCAAATGCTTGCCTAAAGGTGTCTaGGTGACTATAATGAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VEISGDLLEVVCHSVPKCLPKGV*VTIMKF Trigger: AAACTTCATTATAGTCACCAAGACACCTTTAGGCAA...GCATTTGGGAACACTATGGCAAACAACCTCCAACAGGTCTCCAGATATCTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | GAAAGATGTCTAGAACTTGAAGATTTCCTGGCATCGTaGTTATCCCCAAACTCCCTTCTGTTGAGACATACT | + |
|
Preference number: 3 (lower is better) Translates to: ERCLELEDFLAS*LSPNSLLLRHT Trigger: AGTATGTCTCAACAGAAGGGAGTTTGGGGATAATCACGATGCCAGGAAATCTTCAAGTTCTAGACATCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR GCA 72 bp | ATTTGTTCTTGGCTAATTGCTAATATAAAGGCATTCTaGAAGAAGCGCATTGGAGGATCAAGGGGAAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ICSWLIANIKAF*KKRIGGSRGSV Trigger: AACACTTCCCCTTGATCCTCCAATGCGCTTCTTGCAGAATGCCTTTATATTAGCAATTAGCCAAGAACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR TCA 72 bp | TTGCCTAAAGGTGTCTTGGTGACTATAATGAAGTTTTaGGGGTACTTACCTCTTGGGTTATATCTACTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPKGVLVTIMKF*GYLPLGLYLLV Trigger: AACAAGTAGATATAACCCAAGAGGTAAGTACCCTCAAAACTTCATTATAGTCACCAAGACACCTTTAGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CCA 72 bp | AATACAGTTCAATACGACATTGATTCCATTAGGCGTTaGGTTAGATTAAATTCTCCAAAACAGAAGAGCGAC | + |
|
Preference number: 3 (lower is better) Translates to: NTVQYDIDSIRR*VRLNSPKQKSD Trigger: GTCGCTCTTCTGTTTTGGAGAATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CCA 90 bp | GCCTCCCGTCCTTCTGTTCTGGAGCTGTGTAGACGCAGAGATGTGGTGGGGAAGCAGGTCCTTGGACTCTaGAGACCTCTCGTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASRPSVLELCRRRDVVGKQVLGL*RPLVYL Trigger: GAGGTAGACGAGAGGTCTCCAGAGTCCAAGGACCTG...CTTCCCCACCACATCTCTGCGTCTACACAGCTCCAGAACAGAAGGACGGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | CCTCTGCTCTCTGGCCTGGCCTTGCCTGGAACAGCTTaGGAAATTTCTTATAGGTGCCCGGTCTTTTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLLSGLALPGTA*EISYRCPVFCL Trigger: TAGGCAAAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGTTCCAGGCAAGGCCAGGCCAGAGAGCAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAGACAATGAGCTCTCAGGACAATGAGGTGCATGGGGTGCGGATTCCAGCTTCTGCTTCTTTTTaGTTATGGGGACCCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: CAQTMSSQDNEVHGVRIPASASF*LWGPTP Trigger: TGGTGTGGGTCCCCATAATCAAAAAGAAGCAGAAGC...TGGAATCCGCACCCCATGCACCTCATTGTCCTGAGAGCTCATTGTCTGGGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAAGTTGCTTTTGGGTGTaGTGGTCCAGACAGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSQSSRKDASEEPCMKSCFWV*WSRQTH Trigger: GTGAGTCTGTCTGGACCACCACACCCAAAAGCAACT...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | TCTGAGATGACTGAAATCACTACCCAGAATGCTTTGTaGCAGAGACACGGCATCCAACCCGGCTGCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEMTEITTQNAL*QRHGIQPGCTH Trigger: GTGAGTGCAGCCGGGTTGGATGCCGTGTCTCTGCAACAAAGCATTCTGGGTAGTGATTTCAGTCATCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | TCTGCAAGAAGCGCATTGGAGGATCAAGGGGAAGTGTaGATACCTCTTAGCCTGCATATTGCCTCTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SARSALEDQGEV*IPLSLHIASCA Trigger: GGCACAAGAGGCAATATGCAGGCTAAGAGGTATCAACACTTCCCCTTGATCCTCCAATGCGCTTCTTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | AGTCAACCTGAACCAATGCAGCTCTTGTCATTCACTTaGCTACTAGGTACCTTCCTCTGCTCTCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQPEPMQLLSFT*LLGTFLCSLAW Trigger: CCAGGCCAGAGAGCAGAGGAAGGTACCTAGTAGCAAAGTGAATGACAAGAGCTGCATTGGTTCAGGTTGACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | TCTTCTGAGATGACTGAAATCACTACCCAGAATGCTTaGTTGCAGAGACACGGCATCCAACCCGGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSEMTEITTQNA*LQRHGIQPGCT Trigger: AGTGCAGCCGGGTTGGATGCCGTGTCTCTGCAACAAAGCATTCTGGGTAGTGATTTCAGTCATCTCAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGCTGACTACCTTGCACATCTTGCTCATTCCAAACACTTCCTTCCCCTTGGTAGATTTCCCAGTTaGTTTTGGGTGTGGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVADYLAHLAHSKHFLPLGRFPS*FWVWWS Trigger: GGACCACCACACCCAAAAGCAACTGGGAAATCTACC...AAGGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCCCAGACAATGAGCTCTCAGGACAATGAGGTGCATGGGGTGCGGATTCCAATCATCCTGAGCACTTaGACAACTTTATGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAQTMSSQDNEVHGVRIPIILST*TTLCFS Trigger: AGAGAAGCATAAAGTTGTGCAAGTGCTCAGGATGAT...TGGAATCCGCACCCCATGCACCTCATTGTCCTGAGAGCTCATTGTCTGGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTTGCTGACTACCTTGCACATCTTGCTCATTCCAAACACTTCCTTCCCCTTTGCTTTTGGGTGTGGTaGTCCAGACAGACTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVADYLAHLAHSKHFLPLCFWVW*SRQTHF Trigger: GAAGTGAGTCTGTCTGGACCACCACACCCAAAAGCA...AAGGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CCA 90 bp | GCCATGCATGAAACTGGCTCTGTTTTTATTCTCCCTGGCAGCCCTCTTGAGAAATTTCCCAGTTGCTTTTaGGTGTGGTGGTCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AMHETGSVFILPGSPLEKFPSCF*VWWSRQ Trigger: CTGTCTGGACCACCACACCCAAAAGCAACTGGGAAA...TTTCTCAAGAGGGCTGCCAGGGAGAATAAAAACAGAGCCAGTTTCATGCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | GTTCCCATGGCCACCCTAAGAACTCAGTATGGAGTATaGCCAGTTGGCTTGGCCATGTTTTTCCCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPMATLRTQYGV*PVGLAMFFPLS Trigger: TGAAAGAGGGAAAAACATGGCCAAGCCAACTGGCAATACTCCATACTGAGTTCTTAGGGTGGCCATGGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | TTAGCTTCTCCACATGCAAGGCAGTTGCTGACTACCTaGCACATCTTGCTCATTCCAAACACTTCCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LASPHARQLLTT*HILLIPNTSFP Trigger: GGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGCCTTGCATGTGGAGAAGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | GTCTCTTTCCCCTTAGCTTCTCCACATGCAAGGCAGTaGCTGACTACCTTGCACATCTTGCTCATTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFPLASPHARQ*LTTLHILLIPN Trigger: GTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGCCTTGCATGTGGAGAAGCTAAGGGGAAAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | TTTCTTCAGGTTAAGTTCTGGGTCTCTGTATTGGACTaGTGGGATCCCTCTGCACCACCATCGTCTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLQVKFWVSVLD*WDPSAPPSSQS Trigger: ACTCTGAGACGATGGTGGTGCAGAGGGATCCCACAAGTCCAATACAGAGACCCAGAACTTAACCTGAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGCTGACTACCTTGCACATCTTGCTCATTCCAAACACTTCCTTCCCCTTTCAGGAGGAAGAACTTaGGGCTTTGGAAGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVADYLAHLAHSKHFLPLSGGRT*GFGRSW Trigger: CCAACTTCTTCCAAAGCCTCAAGTTCTTCCTCCTGA...AAGGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR GCA 90 bp | CCACCATCGTCTCAGAGTAGTCGCAAGGATGCTTCTGAGGAGCCATGCATGAAAAAGAAGTTGGACTTCTaGCTTTGCTTCTGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPSSQSSRKDASEEPCMKKKLDF*LCFCFF Trigger: AAAGAAGCAGAAGCAAAGGCAGAAGTCCAACTTCTT...TTTCATGCATGGCTCCTCAGAAGCATCCTTGCGACTACTCTGAGACGATGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | CCACATGCAAGGCAGTTGCTGACTACCTTGCACATCTaGCTCATTCCAAACACTTCCTTCCCCTTCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: PHARQLLTTLHI*LIPNTSFPFIF Trigger: GAATATGAAGGGGAAGGAAGTGTTTGGAATGAGCAAGATGTGCAAGGTAGTCAGCAACTGCCTTGCATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | ATACAGTCCGGTGGGATGGTGCTGTGGATGTTGCTCTaGTCTTCTGAGATGACTGAAATCACTACCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQSGGMVLWMLL*SSEMTEITTQN Trigger: ATTCTGGGTAGTGATTTCAGTCATCTCAGAAGACAAGAGCAACATCCACAGCACCATCCCACCGGACTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | ATGTTCTTTCTTCAGGTTAAGTTCTGGGTCTCTGTATaGGACTTGTGGGATCCCTCTGCACCACCATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MFFLQVKFWVSV*DLWDPSAPPSS Trigger: AGACGATGGTGGTGCAGAGGGATCCCACAAGTCCAATACAGAGACCCAGAACTTAACCTGAAGAAAGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAAGGAAGTTAGAACAAAGAGCATTTGTTCTTGGCTAATTGCTAATATATGTAGGCCACACAGGTaGTGGCCACGCCAAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGKEVRTKSICSWLIANICRPHR*WPRQRA Trigger: TGCTCTTTGGCGTGGCCATCACCTGTGTGGCCTACA...TATATTAGCAATTAGCCAAGAACAAATGCTCTTTGTTCTAACTTCCTTCCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATAGCTGGCTGTCTGGCTaGGCAGCAGGTCCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNSWLSG*AAGPWT Trigger: AGTCCAAGGACCTGCTGCCCAGCCAGACAGCCAGCT...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CCA 90 bp | CAGAATACAGTTCAATACGACATTGATTCCATTAGGCGTTGGGTTAGATTAAATTGGGCAGCAGGTCCTTaGACTCTGGAGACCTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QNTVQYDIDSIRRWVRLNWAAGP*TLETSR Trigger: ACGAGAGGTCTCCAGAGTCCAAGGACCTGCTGCCCA...ATTTAATCTAACCCAACGCCTAATGGAATCAATGTCGTATTGAACTGTATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | ATGGGACTGAAGTCAGCCTTATCTGCTTGGTCACTTTaGGTTCCAGAAGGATGTAGATGGGAATCTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: MGLKSALSAWSL*VPEGCRWESKI Trigger: GATCTTAGATTCCCATCTACATCCTTCTGGAACCAAAAGTGACCAAGCAGATAAGGCTGACTTCAGTCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | TGTGAATGGTTGAGATATCTGGAGACCTGTTGGAGGTaGTTTGCCATAGTGTTCCCAAATGCCCAAAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CEWLRYLETCWR*FAIVFPNAQRL Trigger: TAACCTTTGGGCATTTGGGAACACTATGGCAAACAACCTCCAACAGGTCTCCAGATATCTCAACCATTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| 3UTR CAA 72 bp | TCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTaGATTCCACAAAACAAATACTTCCTCCGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCVCVCVCV*IPQNKYFLRGM Trigger: CATTCCTCGGAGGAAGTATTTGTTTTGTGGAATCAACACACACACACACACACACACACAGAGAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CCA 90 bp | CATTTGTTAGATCCATGTGTTCCCATGGCCACCCTAAGAACTCAGTATGGAGTAAAGAACTTGAGGCTTTaGAAGAAGTTGGACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLDPCVPMATLRTQYGVKNLRL*KKLDFC Trigger: GCAGAAGTCCAACTTCTTCCAAAGCCTCAAGTTCTT...TACTCCATACTGAGTTCTTAGGGTGGCCATGGGAACACATGGATCTAACAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCGTCCTTCTGTTCTGGAGCTGTGTAGACGCAGAGATGTGGTGGGGAAGTGCTTCTGCTTCTTTTaGATTATGGGGACCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: ASRPSVLELCRRRDVVGKCFCFF*IMGTHT Trigger: GGTGTGGGTCCCCATAATCAAAAAGAAGCAGAAGCA...CTTCCCCACCACATCTCTGCGTCTACACAGCTCCAGAACAGAAGGACGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS TCA 90 bp | CACACAGGTGATGGCCACGCCAAAGAGCAGAATGGCAGCTCCCACTaGCATGATGATGATGGGCTTGTGGTAGATTTCCCAGTTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HTGDGHAKEQNGSSH*HDDDGLVVDFPVAF Trigger: AAAAGCAACTGGGAAATCTACCACAAGCCCATCATCATCATGTCAGTGGGAGCTGCCATTCTGCTCTTTGGCGTGGCCATCACCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CAA 90 bp | GTTGAGATATCTGGAGACCTGTTGGAGGTTGTTTGCCATAGTGTTCCCAAATGCATTTCCCAGTTGCTTTaGGGTGTGGTGGTCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: VEISGDLLEVVCHSVPKCISQLL*GVVVQT Trigger: TGTCTGGACCACCACACCCAAAAGCAACTGGGAAAT...GCATTTGGGAACACTATGGCAAACAACCTCCAACAGGTCTCCAGATATCTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CAA 90 bp | CATTTGTTAGATCCATGTGTTCCCATGGCCACCCTAAGAACTCAGTATGGAGTAAGGCTTTGGAAGAAGTaGGACTTCTGCCTTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLLDPCVPMATLRTQYGVRLWKK*DFCLCF Trigger: GAAGCAAAGGCAGAAGTCCAACTTCTTCCAAAGCCT...TACTCCATACTGAGTTCTTAGGGTGGCCATGGGAACACATGGATCTAACAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTTGGAAATTTCTTATAGGTGCCCGGTCTTTTGCCTAAAGGTGTCTTGGGTTGGACTTCTGCCTTaGCTTCTGCTTCTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TALEISYRCPVFCLKVSWVGLLP*LLLLFD Trigger: ATCAAAAAGAAGCAGAAGCAAAGGCAGAAGTCCAAC...CCAAGACACCTTTAGGCAAAAGACCGGGCACCTATAAGAAATTTCCAAAGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS TCA 72 bp | GATGGCCACGCCAAAGAGCAGAATGGCAGCTCCCACTaGCATGATGATGATGGGCTTGTGGTAGATTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: DGHAKEQNGSSH*HDDDGLVVDFP Trigger: TGGGAAATCTACCACAAGCCCATCATCATCATGTCAGTGGGAGCTGCCATTCTGCTCTTTGGCGTGGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS TCA 72 bp | CTTTATGCTTCTCTTCCAAGATGTAGGCCACACAGGTaGTGGCCACGCCAAAGAGCAGAATGGCAGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LYASLPRCRPHR*WPRQRAEWQLP Trigger: TGGGAGCTGCCATTCTGCTCTTTGGCGTGGCCATCACCTGTGTGGCCTACATCTTGGAAGAGAAGCATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS GCA 72 bp | AACTTGAGGCTTTGGAAGAAGTTGGACTTCTGCCTTTaGTTCTGCTTCTTTTTGATTATGGGGACCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: NLRLWKKLDFCL*FCFFLIMGTHT Trigger: GGTGTGGGTCCCCATAATCAAAAAGAAGCAGAAGCAAAGGCAGAAGTCCAACTTCTTCCAAAGCCTCAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||
| CDS CAA 72 bp | GAACTTGAGGCTTTGGAAGAAGTTGGACTTCTGCCTTaGCTTCTGCTTCTTTTTGATTATGGGGACCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: ELEALEEVGLLP*LLLLFDYGDPH Trigger: GTGTGGGTCCCCATAATCAAAAAGAAGCAGAAGCAAAGGCAGAAGTCCAACTTCTTCCAAAGCCTCAAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123434.3 |
||