Pregenerated sensors for PIP5KL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046854Ensembl transcript IDs: ENSMUST00000055304.14, ENSMUST00000100188.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCACCTCTGCCCACCGACAGAGGCGACGGGCGTAGTGAGCCGGGCTaGCAGTGGAGACGCTCTGGCCTGGATAGCGTACCATCTTCCACA | + |
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Preference number: 1 (lower is better) Translates to: APLPTDRGDGRSEPG*QWRRSGLDSVPSST Trigger: TGTGGAAGATGGTACGCTATCCAGGCCAGAGCGTCTCCACTGTCAGCCCGGCTCACTACGCCCGTCGCCTCTGTCGGTGGGCAGAGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CCA 90 bp | CCAGAAAATAGCGTTGGTCTGGCCCGTCCAAGATATGGAGGGCATTaGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCCCCGTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PENSVGLARPRYGGH*EGRAASGSSGPPFP Trigger: AGGGAACGGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTTGGACGGGCCAGACCAACGCTATTTTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CCA 90 bp | GCGACGGGCGTAGTGAGCCGGGCTGACAGTGGAGACGCTCTGGCCTaGATAGCGTACCATCTTCCACACATGTTCCAGCCGTTTGCGAAA | + |
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Preference number: 1 (lower is better) Translates to: ATGVVSRADSGDALA*IAYHLPHMFQPFAK Trigger: TTTCGCAAACGGCTGGAACATGTGTGGAAGATGGTACGCTATCCAGGCCAGAGCGTCTCCACTGTCAGCCCGGCTCACTACGCCCGTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CCA 90 bp | AAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTaGTCCCCCGTTCCCTTCGACTTCGACACACCTTGTATGGACCTG | + |
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Preference number: 1 (lower is better) Translates to: KIWRALGRSGSIRQF*SPVPFDFDTPCMDL Trigger: CAGGTCCATACAAGGTGTGTCGAAGTCGAAGGGAACGGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCCGTCCAAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCCCTGGCTCTGTTTCCTaGGTGCTGGGATTAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GPSKIWRALGRSGSIRQFPGSVS*VLGLKV Trigger: CACCTTTAATCCCAGCACCCAGGAAACAGAGCCAGG...GAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTTGGACGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CAA 90 bp | CATCCGGCAGTTCTGGTCCCCCGTTCCCTTCGACTTCGACACACCTaGTATGGACCTGGCTCTGTTTCCTGGGTGCTGGGATTAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HPAVLVPRSLRLRHT*YGPGSVSWVLGLKV Trigger: CACCTTTAATCCCAGCACCCAGGAAACAGAGCCAGGTCCATACAAGGTGTGTCGAAGTCGAAGGGAACGGGGGACCAGAACTGCCGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR TCA 72 bp | CCCACCGACAGAGGCGACGGGCGTAGTGAGCCGGGCTaGCAGTGGAGACGCTCTGGCCTGGATAGCGTACCA | + |
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Preference number: 3 (lower is better) Translates to: PTDRGDGRSEPG*QWRRSGLDSVP Trigger: TGGTACGCTATCCAGGCCAGAGCGTCTCCACTGTCAGCCCGGCTCACTACGCCCGTCGCCTCTGTCGGTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CCA 72 bp | AGCGTTGGTCTGGCCCGTCCAAGATATGGAGGGCATTaGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SVGLARPRYGGH*EGRAASGSSGP Trigger: GGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTTGGACGGGCCAGACCAACGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CCA 72 bp | AGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTaGTCCCCCGTTCCCTTCGACTTCGACACACCTTGT | + |
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Preference number: 3 (lower is better) Translates to: RALGRSGSIRQF*SPVPFDFDTPC Trigger: ACAAGGTGTGTCGAAGTCGAAGGGAACGGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CCA 72 bp | GTAGTGAGCCGGGCTGACAGTGGAGACGCTCTGGCCTaGATAGCGTACCATCTTCCACACATGTTCCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: VVSRADSGDALA*IAYHLPHMFQP Trigger: CGGCTGGAACATGTGTGGAAGATGGTACGCTATCCAGGCCAGAGCGTCTCCACTGTCAGCCCGGCTCACTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CCA 72 bp | CTTCGACACACCTTGTATGGACCTGGCTCTGTTTCCTaGGTGCTGGGATTAAAGGTGTACTTTAGGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: LRHTLYGPGSVS*VLGLKVYFRAH Trigger: ATGTGCCCTAAAGTACACCTTTAATCCCAGCACCCAGGAAACAGAGCCAGGTCCATACAAGGTGTGTCGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGCCAGCCTCCTGGGAGTaGGCCGGGATCTCGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQPASWE*AGISWD Trigger: GTCCCACGAGATCCCGGCCCACTCCCAGGAGGCTGG...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS-3UTR GCA 90 bp | GAGTCATTCTGTGTGCACCTCTGCCCACCGACAGAGGCGACGGGCGTAGTGAGCCCAAGACAAGGGGGCTaGCCTCAGGGGCTGGATCTA | + |
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Preference number: 4 (lower is better) Translates to: ESFCVHLCPPTEATGVVSPRQGG*PQGLDL Trigger: TAGATCCAGCCCCTGAGGGCAGCCCCCTTGTCTTGG...GCTCACTACGCCCGTCGCCTCTGTCGGTGGGCAGAGGTGCACACAGAATGACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | CTGGCCCGTCCAAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTTGGAGACCTGGGTaGCAGCCCACAGCCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LARPRYGGHWEGRAASGSSWRPG*QPTALP Trigger: AGGAAGGGCTGTGGGCTGCCACCCAGGTCTCCAAGA...ACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTTGGACGGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGCCAAGACAAGGGGGCTaGCCTCAGGGGCTGGATCTA | + |
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Preference number: 4 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQPRQGG*PQGLDL Trigger: TAGATCCAGCCCCTGAGGGCAGCCCCCTTGTCTTGG...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTAGTGTCTAGCTCCATCTaGCGGAGGAACCAGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: GCFPLVAGRMNCRLAPWVVSSSI*RRNQLR Trigger: GCGGAGCTGGTTCCTCCGGCAGATGGAGCTAGACAC...TACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAAGCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | GGGTGCTTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTATCTTGGAGACCTGGGTaGCAGCCCACAGCCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCFPLVAGRMNCRLAPWVSWRPG*QPTALP Trigger: AGGAAGGGCTGTGGGCTGCCACCCAGGTCTCCAAGA...TACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAAGCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCCCCGTTCTGCCAGCAGGGAGTGTaGGTATTGCTGCAGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YGGHWEGRAASGSSGPPFCQQGV*VLLQVL Trigger: GAGCACCTGCAGCAATACCCACACTCCCTGCTGGCA...GAACGGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TCTGGCCTGGATAGCGTACCATCTTCCACACATGTTCCAGCCGTTTGCGAAACCCCAGCCTCCTGGGAGTaGGCCGGGATCTCCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SGLDSVPSSTHVPAVCETPASWE*AGISVG Trigger: CCCCACGGAGATCCCGGCCCACTCCCAGGAGGCTGG...GGTTTCGCAAACGGCTGGAACATGTGTGGAAGATGGTACGCTATCCAGGCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR GCA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGTTCTGTGTGCACCTCTaGCCACCGACAGAGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLFCVHL*PPTEAT Trigger: CGTCGCCTCTGTCGGTGGGCAGAGGTGCACACAGAA...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS-3UTR CCA 90 bp | GAGTCATTCTGTGTGCACCTCTGCCCACCGACAGAGGCGACGGGCGTAGTGAGCATGCAGCTCATGTCCTaGACCGACCTCAAACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESFCVHLCPPTEATGVVSMQLMS*TDLKQA Trigger: GGCCTGTTTGAGGTCGGTCCAGGACATGAGCTGCAT...GCTCACTACGCCCGTCGCCTCTGTCGGTGGGCAGAGGTGCACACAGAATGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | AAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCCCCTTGTTCTTGGAGACCTaGGTGGCAGCCCACAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KIWRALGRSGSIRQFWSPLFLET*VAAHSP Trigger: AGGGCTGTGGGCTGCCACCCAGGTCTCCAAGAACAA...GGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | GGCCCGTCCAAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCGGCTCCCTGAGGAAATaGACTTGTTTCCAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GPSKIWRALGRSGSIRQFGSLRK*TCFQPP Trigger: AGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCC...GAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTTGGACGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | GGGTGCTTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTAATGCAGCTCATGTCCTaGACCGACCTCAAACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCFPLVAGRMNCRLAPWVMQLMS*TDLKQA Trigger: GGCCTGTTTGAGGTCGGTCCAGGACATGAGCTGCAT...TACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAAGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGAGTAGGTCCCGTGGGTaGGTTGTTCTTGGAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQSRSRG*VVLGDL Trigger: CAGGTCTCCAAGAACAACCCACCCACGGGACCTACT...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | AAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCCCCGGGTCAGGAAGAAGCTaGCCTTGCTTTTGGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KIWRALGRSGSIRQFWSPGSGRS*PCFWRC Trigger: GCACCTCCAAAAGCAAGGCCAGCTTCTTCCTGACCC...GGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGTGCCAGCAGGGAGTGTaGGTATTGCTGCAGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLCQQGV*VLLQVL Trigger: GAGCACCTGCAGCAATACCCACACTCCCTGCTGGCA...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | GGGTGCTTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTATCTTCGTGGAGAAACTaGATGGCCACCAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GCFPLVAGRMNCRLAPWVSSWRN*MATRRL Trigger: CAGCCTCCTGGTGGCCATCCAGTTTCTCCACGAAGA...TACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAAGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGAGATATGGAGGGCATTaGGAAGGTCGGGCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQRYGGH*EGRAAS Trigger: GGATGCTGCCCGACCTTCCCAATGCCCTCCATATCT...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS-3UTR CCA 90 bp | TGCTTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGGGGTCAGGAAGAAGCTaGCCTTGCTTTTGGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: CFPLVAGRMNCRLAPWVQGSGRS*PCFWRC Trigger: GCACCTCCAAAAGCAAGGCCAGCTTCTTCCTGACCC...CTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGCGTGGAGAAACTGGATaGCCACCAGGAGGCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQRGETG*PPGGCN Trigger: ATTACAGCCTCCTGGTGGCCATCCAGTTTCTCCACG...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | AAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCCCCCGTGGAGAAACTGGATaGCCACCAGGAGGCTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: KIWRALGRSGSIRQFWSPRGETG*PPGGCN Trigger: ATTACAGCCTCCTGGTGGCCATCCAGTTTCTCCACG...GGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR TCA 90 bp | GTCATTCTGTGTGCACCTCTGCCCACCGACAGAGGCGACGGGCGTAGTGAGCCGCTCATGGTCTTTTCTTaGAAGTTGAGGTCCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VILCAPLPTDRGDGRSEPLMVFS*KLRSFS Trigger: GCTGAAGGACCTCAACTTTCAAGAAAAGACCATGAG...CGGCTCACTACGCCCGTCGCCTCTGTCGGTGGGCAGAGGTGCACACAGAATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR TCA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCTGAAGACAGAGTGGTaGATGCCCTTCTCGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLLKTEW*MPFSSS Trigger: CGAAGACGAGAAGGGCATTCACCACTCTGTCTTCAG...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR GCA 90 bp | GGCCCGTCCAAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCATTCGTGTCATTCTATaGAGCTCATGTCCTGGACCG | + |
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Preference number: 4 (lower is better) Translates to: GPSKIWRALGRSGSIRQFIRVIL*SSCPGP Trigger: CGGTCCAGGACATGAGCTGCATAGAATGACACGAAT...GAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTTGGACGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TGCTTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGGGCTCCCTGAGGAAATaGACTTGTTTCCAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CFPLVAGRMNCRLAPWVQGSLRK*TCFQPP Trigger: AGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCC...CTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR TCA 90 bp | GTCATTCTGTGTGCACCTCTGCCCACCGACAGAGGCGACGGGCGTAGTGAGCCGTCTTTTCTTGAAAGTTaGGGTCCTTCAGCACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VILCAPLPTDRGDGRSEPSFLES*GPSAPR Trigger: TCTTGGTGCTGAAGGACCTCAACTTTCAAGAAAAGA...CGGCTCACTACGCCCGTCGCCTCTGTCGGTGGGCAGAGGTGCACACAGAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGATTCGTGTCATTCTATaGAGCTCATGTCCTGGACCG | + |
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Preference number: 4 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQIRVIL*SSCPGP Trigger: CGGTCCAGGACATGAGCTGCATAGAATGACACGAAT...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCTTCAGTCAGGCCAATaGATTTCCTCAGCCGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLLQSGQ*ISSAVQ Trigger: TTGCACGGCTGAGGAAATCCATTGGCCTGACTGAAG...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TCTGGCCTGGATAGCGTACCATCTTCCACACATGTTCCAGCCGTTTGCGAAACCTCTTCGTGGAGAAACTaGATGGCCACCAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGLDSVPSSTHVPAVCETSSWRN*MATRRL Trigger: CAGCCTCCTGGTGGCCATCCAGTTTCTCCACGAAGA...GGTTTCGCAAACGGCTGGAACATGTGTGGAAGATGGTACGCTATCCAGGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TTGTCCATAAGGGAAGAAGGCAGACACGTGAGTCATTCTGTGTGCACCTCTGCCTTCTTGTCCCCTCTCTaGTCCGCACCTACCTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSIREEGRHVSHSVCTSAFLSPL*SAPTSW Trigger: CCACGAGGTAGGTGCGGACCAGAGAGGGGACAAGAA...GGCAGAGGTGCACACAGAATGACTCACGTGTCTGCCTTCTTCCCTTATGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| 3UTR CAA 72 bp | CTCCCTGGGTACAGCTGCAGAATAGTTGCCGGCGCATaGTCCATAAGGGAAGAAGGCAGACACGTGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LPGYSCRIVAGA*SIREEGRHVSH Trigger: ATGACTCACGTGTCTGCCTTCTTCCCTTATGGACAATGCGCCGGCAACTATTCTGCAGCTGTACCCAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR TCA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGTCTTTTCTTGAAAGTTaGGGTCCTTCAGCACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQSFLES*GPSAPR Trigger: TCTTGGTGCTGAAGGACCTCAACTTTCAAGAAAAGA...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR TCA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCTCATGGTCTTTTCTTaGAAGTTGAGGTCCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLLMVFS*KLRSFS Trigger: GCTGAAGGACCTCAACTTTCAAGAAAAGACCATGAG...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR TCA 90 bp | TTTTTAATAGTAAATGAGCTAAGGGTTGGGGTCAGGGTCCTTGCTCTATGCAGGCGTAGTGAGCCGGGCTaGCAGTGGAGACGCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FLIVNELRVGVRVLALCRRSEPG*QWRRSG Trigger: GCCAGAGCGTCTCCACTGTCAGCCCGGCTCACTACG...CCTGCATAGAGCAAGGACCCTGACCCCAACCCTTAGCTCATTTACTATTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS-3UTR CCA 90 bp | TCGACACACCTTGTATGGACCTGGCTCTGTTTCCTGGGTGCTGGGATTAAAGGTCTTCAGTCAGGCCAATaGATTTCCTCAGCCGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STHLVWTWLCFLGAGIKGLQSGQ*ISSAVQ Trigger: TTGCACGGCTGAGGAAATCCATTGGCCTGACTGAAG...ACCTTTAATCCCAGCACCCAGGAAACAGAGCCAGGTCCATACAAGGTGTGTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CCA 90 bp | TTTTTAATAGTAAATGAGCTAAGGGTTGGGGTCAGGGTCCTTGCTCTATGCAGGTTGTTCTTGGAGACCTaGGTGGCAGCCCACAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLIVNELRVGVRVLALCRLFLET*VAAHSP Trigger: AGGGCTGTGGGCTGCCACCCAGGTCTCCAAGAACAA...CCTGCATAGAGCAAGGACCCTGACCCCAACCCTTAGCTCATTTACTATTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| 3UTR CAA 72 bp | GGATTAAAGGTGTACTTTAGGGCACATCTGGTAGGCTaGAAGTCGCAAATGGGCTTACTGGTCAACCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKVYFRAHLVG*KSQMGLLVNPR Trigger: CCTGGGGTTGACCAGTAAGCCCATTTGCGACTTCAAGCCTACCAGATGTGCCCTAAAGTACACCTTTAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS CCA 90 bp | AGGCCGCGGCGGCTCCCTGAGGAAATGGACTTGTTTCCAGCCTCCTaGGAGTGGGCCGGGATCTCGTGGGACCTAAGGCTTGGTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPRRLPEEMDLFPAS*EWAGISWDLRLGVA Trigger: GGCCACACCAAGCCTTAGGTCCCACGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
||
| CDS CCA 90 bp | TGGCTCGGAGGTGCCAAAGAAGGCCGCGGCGGCTCCCTGAGGAAATaGACTTGTTTCCAGCCTCCTGGGAGTGGGCCGGGATCTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLGGAKEGRGGSLRK*TCFQPPGSGPGSPW Trigger: CCACGGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCTTCTTTGGCACCTCCGAGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS CCA 90 bp | AGGCCGCGGCGGCTCCCTGAGGAAATGGACTTGTTTCCAGCCTCCTaGGAGTGGGCCGGGATCTCCGTGGGGCGTGTCTTGATCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPRRLPEEMDLFPAS*EWAGISVGRVLIFP Trigger: TGGGAAGATCAAGACACGCCCCACGGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS GCA 90 bp | TGCAGCTCATGTCCTGGACCGACCTCAAACAGGCCAACTCTAGACTaGCTGGCTCGGAGGTGCCAAAGAAGGCCGCGGCGGCTCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSCPGPTSNRPTLD*LARRCQRRPRRLPE Trigger: CTCAGGGAGCCGCCGCGGCCTTCTTTGGCACCTCCGAGCCAGGCAGTCTAGAGTTGGCCTGTTTGAGGTCGGTCCAGGACATGAGCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS CCA 90 bp | TACCCGCAGACTGTATACGCCCAGCAACCGTGCCAGCAGGGAGTGTaGGTATTGCTGCAGGTGCTCCACATAGCGGGGCAGGTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YPQTVYAQQPCQQGV*VLLQVLHIAGQVGK Trigger: CTTGCCCACCTGCCCCGCTATGTGGAGCACCTGCAGCAATACCCACACTCCCTGCTGGCACGGTTGCTGGGCGTATACAGTCTGCGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGGTGGGTGGGTTGTTCTaGGAGACCTGGGTGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQVGGLF*ETWVAA Trigger: GGCTGCCACCCAGGTCTCCAAGAACAACCCACCCAC...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGGGTCCCGTGGGTGGGTaGTTCTTGGAGACCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLGPVGG*FLETWV Trigger: CACCCAGGTCTCCAAGAACAACCCACCCACGGGACC...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | TATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCCCCGTTCTCCGTGGGGCGTGTCTaGATCTTCCCAGAGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YGGHWEGRAASGSSGPPFSVGRV*IFPEQR Trigger: TCTCTGCTCTGGGAAGATCAAGACACGCCCCACGGA...GAACGGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS GCA 90 bp | AGCCTGGTAGTCCTCTTCAGTCAGGCCAATGGATTTCCTCAGCCGTaGAAAAGCCGGGCCAGCCAAGGTGCCCAGCTCGAAGCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLVVLFSQANGFPQP*KSRASQGAQLEALF Trigger: GAAGAGGGCTTCGAGCTGGGCACCTTGGCTGGCCCGGCTTTTGCACGGCTGAGGAAATCCATTGGCCTGACTGAAGAGGACTACCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | AAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTGGTCCCCCTCACCCTTCCCTTTCTaGTCCCCTCTCTGGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KIWRALGRSGSIRQFWSPSPFPF*SPLWSA Trigger: TGCGGACCAGAGAGGGGACAAGAAAGGGAAGGGTGA...GGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS GCA 90 bp | CTTTTTCCCCTGAGCTACCCGCAGACTGTATACGCCCAGCAACCGTaGCAGCAGGGAGTGTGGGTATTGCTGCAGGTGCTCCACATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LFPLSYPQTVYAQQP*QQGVWVLLQVLHIA Trigger: CGCTATGTGGAGCACCTGCAGCAATACCCACACTCCCTGCTGGCACGGTTGCTGGGCGTATACAGTCTGCGGGTAGCTCAGGGGAAAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS GCA 90 bp | TCCAGTACATTCACCTCCCGCAGGAAGGCGGTGTCTAGCTCCATCTaGCGGAGGAACCAGCTCCGCTGGGCTCCCAATCTCATGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSTFTSRRKAVSSSI*RRNQLRWAPNLMVF Trigger: AAAGACCATGAGATTGGGAGCCCAGCGGAGCTGGTTCCTCCGGCAGATGGAGCTAGACACCGCCTTCCTGCGGGAGGTGAATGTACTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS CCA 90 bp | GGTCATGACTTCCAGGTAATCCTTCTGGGTAGTAGGTCCCGTGGGTaGGTTGTTCTTGGAGACCTGGGTGGCAGCCCACAGCCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHDFQVILLGSRSRG*VVLGDLGGSPQPFL Trigger: CAGGAAGGGCTGTGGGCTGCCACCCAGGTCTCCAAGAACAACCCACCCACGGGACCTACTACCCAGAAGGATTACCTGGAAGTCATGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGCAGCAGGGAGTGTGGGTATaGCTGCAGGTGCTCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: PLVAGRMNCRLAPWVQLQQGVWV*LQVLHI Trigger: TATGTGGAGCACCTGCAGCAATACCCACACTCCCTG...CTGCAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | GAGTCATTCTGTGTGCACCTCTGCCCACCGACAGAGGCGACGGGCGTAGTGAGCACCCAGCGGCTTATGTaGCAGCCCTTGATGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: ESFCVHLCPPTEATGVVSTQRLM*QPLMSY Trigger: GTATGACATCAAGGGCTGCAACATAAGCCGCTGGGT...GCTCACTACGCCCGTCGCCTCTGTCGGTGGGCAGAGGTGCACACAGAATGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS GCA 90 bp | GGTGGGTTGTTCTTGGAGACCTGGGTGGCAGCCCACAGCCCTTCCTaGATCATTCGTGTCATTCTATGCAGCTCATGTCCTGGACCGACC | + |
|
Preference number: 5 (lower is better) Translates to: GGLFLETWVAAHSPS*IIRVILCSSCPGPT Trigger: GGTCGGTCCAGGACATGAGCTGCATAGAATGACACGAATGATGCAGGAAGGGCTGTGGGCTGCCACCCAGGTCTCCAAGAACAACCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 90 bp | GTTGAGGTCCTTCAGCACCAAGACAAGGGGGCTGCCCTCAGGGGCTaGATCTACCCAGCGGCTTATGTTGCAGCCCTTGATGTCATACCT | + |
|
Preference number: 5 (lower is better) Translates to: VEVLQHQDKGAALRG*IYPAAYVAALDVIP Trigger: AGGTATGACATCAAGGGCTGCAACATAAGCCGCTGGGTAGATCCAGCCCCTGAGGGCAGCCCCCTTGTCTTGGTGCTGAAGGACCTCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGAAGATATGGAGGGCATaGGGAAGGTCGGGCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLKIWRA*GRSGSI Trigger: GATGCTGCCCGACCTTCCCAATGCCCTCCATATCTT...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
||
| CDS TCA 90 bp | CGGAGGAACCAGCTCCGCTGGGCTCCCAATCTCATGGTCTTTTCTTaGAAGTTGAGGTCCTTCAGCACCAAGACAAGGGGGCTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRNQLRWAPNLMVFS*KLRSFSTKTRGLPS Trigger: TGAGGGCAGCCCCCTTGTCTTGGTGCTGAAGGACCTCAACTTTCAAGAAAAGACCATGAGATTGGGAGCCCAGCGGAGCTGGTTCCTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 90 bp | TCCTTCTGGGTAGTAGGTCCCGTGGGTGGGTTGTTCTTGGAGACCTaGGTGGCAGCCCACAGCCCTTCCTGCATCATTCGTGTCATTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SFWVVGPVGGLFLET*VAAHSPSCIIRVIL Trigger: TAGAATGACACGAATGATGCAGGAAGGGCTGTGGGCTGCCACCCAGGTCTCCAAGAACAACCCACCCACGGGACCTACTACCCAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 90 bp | AAGATATGGAGGGCATTGGGAAGGTCGGGCAGCATCCGGCAGTTCTaGTCCCCCGTTCCCTTCGACTTCGACACACCTTGTATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KIWRALGRSGSIRQF*SPVPFDFDTPCMDL Trigger: CAAGTCCATACAAGGTGTGTCGAAGTCGAAGGGAACGGGGGACCAGAACTGCCGGATGCTGCCCGACCTTCCCAATGCCCTCCATATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS-3UTR CAA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGGGAGGTGCTGAAGAATaGAAGGTAGGGATCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLGGAEE*KVGITR Trigger: CCTGGTGATCCCTACCTTCAATTCTTCAGCACCTCC...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CAA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGAGGAAGAAGCTGGCCTaGCTTTTGGAGGTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLRKKLA*LLEVLK Trigger: CTTCAGCACCTCCAAAAGCAAGGCCAGCTTCTTCCT...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 90 bp | CAGCCCTTCCTGCATCATTCGTGTCATTCTATGCAGCTCATGTCCTaGACCGACCTCAAACAGGCCAACTCTAGACTGCCTGGCTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPFLHHSCHSMQLMS*TDLKQANSRLPGSE Trigger: CTCCGAGCCAGGCAGTCTAGAGTTGGCCTGTTTGAGGTCGGTCCAGGACATGAGCTGCATAGAATGACACGAATGATGCAGGAAGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 90 bp | AGACAGAGTGGTGAATGCCCTTCTCGTCTTCGTGGAGAAACTGGATaGCCACCAGGAGGCTGTAATCCAGTACATTCACCTCCCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQSGECPSRLRGETG*PPGGCNPVHSPPAG Trigger: TCCTGCGGGAGGTGAATGTACTGGATTACAGCCTCCTGGTGGCCATCCAGTTTCTCCACGAAGACGAGAAGGGCATTCACCACTCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CAA 90 bp | TTCCCTCTGGTGGCTGGTAGGATGAACTGCAGGCTAGCTCCCTGGGTACAGCTGACACCTTGTATGGACTaGAATGTGCTGAAGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FPLVAGRMNCRLAPWVQLTPCMD*NVLKTE Trigger: CTCTGTCTTCAGCACATTCAAGTCCATACAAGGTGT...CAGCTGTACCCAGGGAGCTAGCCTGCAGTTCATCCTACCAGCCACCAGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS-3UTR CAA 90 bp | TTTTTAATAGTAAATGAGCTAAGGGTTGGGGTCAGGGTCCTTGCTCTATGCAGGGTGGGTGGGTTGTTCTaGGAGACCTGGGTGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLIVNELRVGVRVLALCRVGGLF*ETWVAA Trigger: GGCTGCCACCCAGGTCTCCAAGAACAACCCACCCAC...CCTGCATAGAGCAAGGACCCTGACCCCAACCCTTAGCTCATTTACTATTAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CAA 90 bp | TCGACACACCTTGTATGGACCTGGCTCTGTTTCCTGGGTGCTGGGATTAAAGGTGGAGGTGCTGAAGAATaGAAGGTAGGGATCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STHLVWTWLCFLGAGIKGGGAEE*KVGITR Trigger: CCTGGTGATCCCTACCTTCAATTCTTCAGCACCTCC...ACCTTTAATCCCAGCACCCAGGAAACAGAGCCAGGTCCATACAAGGTGTGTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS-3UTR CAA 90 bp | TTTTTAATAGTAAATGAGCTAAGGGTTGGGGTCAGGGTCCTTGCTCTATGCAGGACCCAGCGGCTTATGTaGCAGCCCTTGATGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: FLIVNELRVGVRVLALCRTQRLM*QPLMSY Trigger: GTATGACATCAAGGGCTGCAACATAAGCCGCTGGGT...CCTGCATAGAGCAAGGACCCTGACCCCAACCCTTAGCTCATTTACTATTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS-3UTR CAA 90 bp | TCGACACACCTTGTATGGACCTGGCTCTGTTTCCTGGGTGCTGGGATTAAAGGTTCTCATGGTCTTTTCTaGAAAGTTGAGGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: STHLVWTWLCFLGAGIKGSHGLF*KVEVLQ Trigger: CTGAAGGACCTCAACTTTCAAGAAAAGACCATGAGA...ACCTTTAATCCCAGCACCCAGGAAACAGAGCCAGGTCCATACAAGGTGTGTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS-3UTR CAA 90 bp | TTTTTAATAGTAAATGAGCTAAGGGTTGGGGTCAGGGTCCTTGCTCTATGCAGGTCTCATGGTCTTTTCTaGAAAGTTGAGGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLIVNELRVGVRVLALCRSHGLF*KVEVLQ Trigger: CTGAAGGACCTCAACTTTCAAGAAAAGACCATGAGA...CCTGCATAGAGCAAGGACCCTGACCCCAACCCTTAGCTCATTTACTATTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 90 bp | CGGAGGTGCCAAAGAAGGCCGCGGCGGCTCCCTGAGGAAATGGACTaGTTTCCAGCCTCCTGGGAGTGGGCCGGGATCTCCGTGGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RRCQRRPRRLPEEMD*FPASWEWAGISVGR Trigger: ACGCCCCACGGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCTTCTTTGGCACCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS CCA 72 bp | GGTGCCAAAGAAGGCCGCGGCGGCTCCCTGAGGAAATaGACTTGTTTCCAGCCTCCTGGGAGTGGGCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAKEGRGGSLRK*TCFQPPGSGPG Trigger: TCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCTTCTTTGGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS CAA 72 bp | TACGCCCAGCAACCGTGCCAGCAGGGAGTGTGGGTATaGCTGCAGGTGCTCCACATAGCGGGGCAGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: YAQQPCQQGVWV*LQVLHIAGQVG Trigger: GCCCACCTGCCCCGCTATGTGGAGCACCTGCAGCAATACCCACACTCCCTGCTGGCACGGTTGCTGGGCGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS CAA 90 bp | CGGAGGTGCCAAAGAAGGCCGCGGCGGCTCCCTGAGGAAATGGACTaGTTTCCAGCCTCCTGGGAGTGGGCCGGGATCTCGTGGGACCTA | + |
|
Preference number: 6 (lower is better) Translates to: RRCQRRPRRLPEEMD*FPASWEWAGISWDL Trigger: TAGGTCCCACGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCTTCTTTGGCACCTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
||
| CDS GCA 72 bp | TGTCCTGGACCGACCTCAAACAGGCCAACTCTAGACTaGCTGGCTCGGAGGTGCCAAAGAAGGCCGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CPGPTSNRPTLD*LARRCQRRPRR Trigger: CCGCCGCGGCCTTCTTTGGCACCTCCGAGCCAGGCAGTCTAGAGTTGGCCTGTTTGAGGTCGGTCCAGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS GCA 72 bp | TTCACCTCCCGCAGGAAGGCGGTGTCTAGCTCCATCTaGCGGAGGAACCAGCTCCGCTGGGCTCCCAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: FTSRRKAVSSSI*RRNQLRWAPNL Trigger: GAGATTGGGAGCCCAGCGGAGCTGGTTCCTCCGGCAGATGGAGCTAGACACCGCCTTCCTGCGGGAGGTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS CCA 72 bp | CGGCTCCCTGAGGAAATGGACTTGTTTCCAGCCTCCTaGGAGTGGGCCGGGATCTCCGTGGGGCGTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLPEEMDLFPAS*EWAGISVGRVL Trigger: CAAGACACGCCCCACGGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS CAA 72 bp | CAAAGAAGGCCGCGGCGGCTCCCTGAGGAAATGGACTaGTTTCCAGCCTCCTGGGAGTGGGCCGGGATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QRRPRRLPEEMD*FPASWEWAGIS Trigger: CGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCTTCTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
||
| CDS CAA 72 bp | CAAAGAAGGCCGCGGCGGCTCCCTGAGGAAATGGACTaGTTTCCAGCCTCCTGGGAGTGGGCCGGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QRRPRRLPEEMD*FPASWEWAGIS Trigger: GGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCGCCGCGGCCTTCTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
||
| CDS CAA 90 bp | CAGACTGTATACGCCCAGCAACCGTGCCAGCAGGGAGTGTGGGTATaGCTGCAGGTGCTCCACATAGCGGGGCAGGTGGGCAAGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QTVYAQQPCQQGVWV*LQVLHIAGQVGKQH Trigger: GTGCTGCTTGCCCACCTGCCCCGCTATGTGGAGCACCTGCAGCAATACCCACACTCCCTGCTGGCACGGTTGCTGGGCGTATACAGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS CAA 72 bp | TCCTTCTGGGTAGTAGGTCCCGTGGGTGGGTTGTTCTaGGAGACCTGGGTGGCAGCCCACAGCCCTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFWVVGPVGGLF*ETWVAAHSPSC Trigger: GCAGGAAGGGCTGTGGGCTGCCACCCAGGTCTCCAAGAACAACCCACCCACGGGACCTACTACCCAGAAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS GCA 72 bp | TCAAACAGGCCAACTCTAGACTGCCTGGCTCGGAGGTaGCAAAGAAGGCCGCGGCGGCTCCCTGAGGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: SNRPTLDCLARR*QRRPRRLPEEM Trigger: CATTTCCTCAGGGAGCCGCCGCGGCCTTCTTTGGCACCTCCGAGCCAGGCAGTCTAGAGTTGGCCTGTTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
||
| CDS GCA 72 bp | CTGAGCTACCCGCAGACTGTATACGCCCAGCAACCGTaGCAGCAGGGAGTGTGGGTATTGCTGCAGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSYPQTVYAQQP*QQGVWVLLQVL Trigger: GAGCACCTGCAGCAATACCCACACTCCCTGCTGGCACGGTTGCTGGGCGTATACAGTCTGCGGGTAGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 72 bp | CGGCTCCCTGAGGAAATGGACTTGTTTCCAGCCTCCTaGGAGTGGGCCGGGATCTCGTGGGACCTAAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RLPEEMDLFPAS*EWAGISWDLRL Trigger: AAGCCTTAGGTCCCACGAGATCCCGGCCCACTCCCAGGAGGCTGGAAACAAGTCCATTTCCTCAGGGAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS CCA 72 bp | AGGTGGGCAAGCAGCACATGCACTTCGTGGCGCCGTTaGGTCTTCACAAAGAAGCGCTGGTCGTGGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RWASSTCTSWRR*VFTKKRWSWVR Trigger: CCTGACCCACGACCAGCGCTTCTTTGTGAAGACCCAACGGCGCCACGAAGTGCATGTGCTGCTTGCCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 72 bp | ACTGTATACGCCCAGCAACCGTGCCAGCAGGGAGTGTaGGTATTGCTGCAGGTGCTCCACATAGCGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TVYAQQPCQQGV*VLLQVLHIAGQ Trigger: CTGCCCCGCTATGTGGAGCACCTGCAGCAATACCCACACTCCCTGCTGGCACGGTTGCTGGGCGTATACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 72 bp | CAGGTGGGCAAGCAGCACATGCACTTCGTGGCGCCGTaGGGTCTTCACAAAGAAGCGCTGGTCGTGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: QVGKQHMHFVAP*GLHKEALVVGQ Trigger: CTGACCCACGACCAGCGCTTCTTTGTGAAGACCCAACGGCGCCACGAAGTGCATGTGCTGCTTGCCCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 90 bp | ATAGCGGGGCAGGTGGGCAAGCAGCACATGCACTTCGTGGCGCCGTaGGGTCTTCACAAAGAAGCGCTGGTCGTGGGTCAGGAAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: IAGQVGKQHMHFVAP*GLHKEALVVGQEEA Trigger: AGCTTCTTCCTGACCCACGACCAGCGCTTCTTTGTGAAGACCCAACGGCGCCACGAAGTGCATGTGCTGCTTGCCCACCTGCCCCGCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS GCA 72 bp | ATTTCCTCAGCCGTGCAAAAGCCGGGCCAGCCAAGGTaGCCAGCTCGAAGCCCTCTTCGTGAACTTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ISSAVQKPGQPR*PARSPLRELGS Trigger: TGACCCAAGTTCACGAAGAGGGCTTCGAGCTGGGCACCTTGGCTGGCCCGGCTTTTGCACGGCTGAGGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS GCA 72 bp | GTCCTCTTCAGTCAGGCCAATGGATTTCCTCAGCCGTaGAAAAGCCGGGCCAGCCAAGGTGCCCAGCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: VLFSQANGFPQP*KSRASQGAQLE Trigger: TTCGAGCTGGGCACCTTGGCTGGCCCGGCTTTTGCACGGCTGAGGAAATCCATTGGCCTGACTGAAGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 72 bp | GTAGTAGGTCCCGTGGGTGGGTTGTTCTTGGAGACCTaGGTGGCAGCCCACAGCCCTTCCTGCATCATTCGT | + |
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Preference number: 6 (lower is better) Translates to: VVGPVGGLFLET*VAAHSPSCIIR Trigger: ACGAATGATGCAGGAAGGGCTGTGGGCTGCCACCCAGGTCTCCAAGAACAACCCACCCACGGGACCTACTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 72 bp | CTTCAGCACCAAGACAAGGGGGCTGCCCTCAGGGGCTaGATCTACCCAGCGGCTTATGTTGCAGCCCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LQHQDKGAALRG*IYPAAYVAALD Trigger: ATCAAGGGCTGCAACATAAGCCGCTGGGTAGATCCAGCCCCTGAGGGCAGCCCCCTTGTCTTGGTGCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 90 bp | AGCCGGGCCAGCCAAGGTGCCCAGCTCGAAGCCCTCTTCGTGAACTaGGGTCATGACTTCCAGGTAATCCTTCTGGGTAGTAGGTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: SRASQGAQLEALFVN*GHDFQVILLGSRSR Trigger: ACGGGACCTACTACCCAGAAGGATTACCTGGAAGTCATGACCCAAGTTCACGAAGAGGGCTTCGAGCTGGGCACCTTGGCTGGCCCGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 90 bp | ACAAGGGGGCTGCCCTCAGGGGCTGGATCTACCCAGCGGCTTATGTaGCAGCCCTTGATGTCATACCTCTCAGAAATGCGGCTGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: TRGLPSGAGSTQRLM*QPLMSYLSEMRLVG Trigger: CCCTACCAGCCGCATTTCTGAGAGGTATGACATCAAGGGCTGCAACATAAGCCGCTGGGTAGATCCAGCCCCTGAGGGCAGCCCCCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 90 bp | CCGGAGGAACCAGCTCCGCTGGGCTCCCAATCTCATGGTCTTTTCTaGAAAGTTGAGGTCCTTCAGCACCAAGACAAGGGGGCTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PEEPAPLGSQSHGLF*KVEVLQHQDKGAAL Trigger: GAGGGCAGCCCCCTTGTCTTGGTGCTGAAGGACCTCAACTTTCAAGAAAAGACCATGAGATTGGGAGCCCAGCGGAGCTGGTTCCTCCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 72 bp | TTCCAGGTAATCCTTCTGGGTAGTAGGTCCCGTGGGTaGGTTGTTCTTGGAGACCTGGGTGGCAGCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: FQVILLGSRSRG*VVLGDLGGSPQ Trigger: CTGTGGGCTGCCACCCAGGTCTCCAAGAACAACCCACCCACGGGACCTACTACCCAGAAGGATTACCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 90 bp | AAGCCTCTGGCCAAGGTAATGGCCAGACTTTCACCCTTCCCTTTCTaGTCCCCTCTCTGGTCCGCACCTACCTCGTGGGACCTAAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: KPLAKVMARLSPFPF*SPLWSAPTSWDLRL Trigger: AAGCCTTAGGTCCCACGAGGTAGGTGCGGACCAGAGAGGGGACAAGAAAGGGAAGGGTGAAAGTCTGGCCATTACCTTGGCCAGAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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| CDS CAA 72 bp | GGGGCTGGATCTACCCAGCGGCTTATGTTGCAGCCCTaGATGTCATACCTCTCAGAAATGCGGCTGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: GAGSTQRLMLQP*MSYLSEMRLVG Trigger: CCCTACCAGCCGCATTTCTGAGAGGTATGACATCAAGGGCTGCAACATAAGCCGCTGGGTAGATCCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 72 bp | CTGCCCTCAGGGGCTGGATCTACCCAGCGGCTTATGTaGCAGCCCTTGATGTCATACCTCTCAGAAATGCGG | + |
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Preference number: 6 (lower is better) Translates to: LPSGAGSTQRLM*QPLMSYLSEMR Trigger: CCGCATTTCTGAGAGGTATGACATCAAGGGCTGCAACATAAGCCGCTGGGTAGATCCAGCCCCTGAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS GCA 72 bp | GCCCACAGCCCTTCCTGCATCATTCGTGTCATTCTATaGAGCTCATGTCCTGGACCGACCTCAAACAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AHSPSCIIRVIL*SSCPGPTSNRP Trigger: TGGCCTGTTTGAGGTCGGTCCAGGACATGAGCTGCATAGAATGACACGAATGATGCAGGAAGGGCTGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 72 bp | AGCCAAGGTGCCCAGCTCGAAGCCCTCTTCGTGAACTaGGGTCATGACTTCCAGGTAATCCTTCTGGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SQGAQLEALFVN*GHDFQVILLGS Trigger: ACTACCCAGAAGGATTACCTGGAAGTCATGACCCAAGTTCACGAAGAGGGCTTCGAGCTGGGCACCTTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CAA 72 bp | CCAGCTCCGCTGGGCTCCCAATCTCATGGTCTTTTCTaGAAAGTTGAGGTCCTTCAGCACCAAGACAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PAPLGSQSHGLF*KVEVLQHQDKG Trigger: CCCCTTGTCTTGGTGCTGAAGGACCTCAACTTTCAAGAAAAGACCATGAGATTGGGAGCCCAGCGGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 72 bp | GGTGAATGCCCTTCTCGTCTTCGTGGAGAAACTGGATaGCCACCAGGAGGCTGTAATCCAGTACATTCACCT | + |
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Preference number: 6 (lower is better) Translates to: GECPSRLRGETG*PPGGCNPVHSP Trigger: AGGTGAATGTACTGGATTACAGCCTCCTGGTGGCCATCCAGTTTCTCCACGAAGACGAGAAGGGCATTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS CCA 72 bp | CTGCATCATTCGTGTCATTCTATGCAGCTCATGTCCTaGACCGACCTCAAACAGGCCAACTCTAGACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LHHSCHSMQLMS*TDLKQANSRLP Trigger: AGGCAGTCTAGAGTTGGCCTGTTTGAGGTCGGTCCAGGACATGAGCTGCATAGAATGACACGAATGATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055304.14 ENSMUST00000100188.3 |
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| CDS TCA 72 bp | CCTTGTATGGACTTGAATGTGCTGAAGACAGAGTGGTaGATGCCCTTCTCGTCTTCGTGGAGAAACTGGATG | + |
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Preference number: 6 (lower is better) Translates to: PCMDLNVLKTEW*MPFSSSWRNWM Trigger: CATCCAGTTTCTCCACGAAGACGAGAAGGGCATTCACCACTCTGTCTTCAGCACATTCAAGTCCATACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055304.14 |
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| CDS TCA 72 bp | GTGACGGTTCTTTTGAATGTGCTGAAGACAGAGTGGTaGATGCCCTTCTCGTCTTCGTGGAGAAACTGGATG | + |
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Preference number: 6 (lower is better) Translates to: VTVLLNVLKTEW*MPFSSSWRNWM Trigger: CATCCAGTTTCTCCACGAAGACGAGAAGGGCATTCACCACTCTGTCTTCAGCACATTCAAAAGAACCGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100188.3 |
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