Pregenerated sensors for PIP5K1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028126Ensembl transcript IDs: ENSMUST00000005768.8, ENSMUST00000107232.9, ENSMUST00000107233.9, ENSMUST00000107236.9
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTaGGAGGAAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: NTMHCPTSQDQMGHN*EEGEGSVAPFPASL Trigger: CAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTTCCTCTCAGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR GCA 90 bp | ACTGAGAGGAAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTaGAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGTACAGA | + |
|
Preference number: 1 (lower is better) Translates to: TERKERAPWPHFQLL*RVRAGQVTWRQPYR Trigger: TCTGTACGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTTCCTCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR GCA 90 bp | GGGAAGGAACTAATGTGGGATTTCAACAGCCAGCCTGAAACACCATaGACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTGAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: GKELMWDFNSQPETP*TAPPARTRWATTER Trigger: CCTCTCAGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTTGAAATCCCACATTAGTTCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR CCA 90 bp | TATAGAAGCCATGGCAGGCAGTGGAAAATTCACGCCACCCACTTCTaGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCACTAC | + |
|
Preference number: 1 (lower is better) Translates to: YRSHGRQWKIHATHF*SGGDDAVLNCQRHY Trigger: GTAGTGCCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGCTTCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCGAGAGCAGCTGCTGGTaGGGCAGCCCCAGCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NSQPETPCTAPPARTRWAESSCW*GSPSLS Trigger: AGAAAGGCTGGGGCTGCCCCACCAGCAGCTGCTCTC...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCGAGAGCAGCTGCTGGTaGGGCAGCCCCAGCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KERAPWPHFQLLCRVRAGESSCW*GSPSLS Trigger: AGAAAGGCTGGGGCTGCCCCACCAGCAGCTGCTCTC...GCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCTCAGAGAGCAGCTGCTaGTGGGGCAGCCCCAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: KERAPWPHFQLLCRVRAGSESSC*WGSPSL Trigger: AAGGCTGGGGCTGCCCCACCAGCAGCTGCTCTCTGA...GCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR TCA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCCCAGCCAGTCCGTCCTaGGGAAATGAAGAGTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSQPETPCTAPPARTRWAPASPS*GNEESS Trigger: GCTGGACTCTTCATTTCCTCAGGACGGACTGGCTGG...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTCCAGCCAGTCCGTCCTaGGGAAATGAAGAGTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QPETPCTAPPARTRWATTPASPS*GNEESS Trigger: GCTGGACTCTTCATTTCCTCAGGACGGACTGGCTGG...AGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR GCA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCCATTTCCAGCTTCTCTaGAGAGTAAGGGCAGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: NSQPETPCTAPPARTRWAHFQLL*RVRAGQ Trigger: CTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGCCAGCCAGTCCGTCCTaGGGAAATGAAGAGTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPPASPS*GNEESS Trigger: GCTGGACTCTTCATTTCCTCAGGACGGACTGGCTGG...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCCTTTATACAAATCATTaGGAGTCTCCAAAGACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSQPETPCTAPPARTRWALYTNH*ESPKTS Trigger: GCTGGTCTTTGGAGACTCCCAATGATTTGTATAAAG...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAAGGTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAAAGCCATGGCAGGCAGTaGAAAATTCACGCCACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: EKGKQEETTSPATPCQHKSHGRQ*KIHATH Trigger: GTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGCT...TTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTACCTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCTTTATACAAATCATTaGGAGTCTCCAAAGACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KERAPWPHFQLLCRVRAGLYTNH*ESPKTS Trigger: GCTGGTCTTTGGAGACTCCCAATGATTTGTATAAAG...GCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGTCCACTCTCCTAACATaGCTGCCCCTTTGTCTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPSTLLT*LPLCLK Trigger: TTTAAGACAAAGGGGCAGCCATGTTAGGAGAGTGGA...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGCAGCCCCAGCCTTTCTGCTTCACAAACACTAGGGCTCTTCTACAACACTTGTCAGCACAAAGAATaGGGGTTTGAAAAATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: WGSPSLSASQTLGLFYNTCQHKE*GFEKYS Trigger: TGAATATTTTTCAAACCCCCATTCTTTGTGCTGACA...AGTGTTGTAGAAGAGCCCTAGTGTTTGTGAAGCAGAAAGGCTGGGGCTGCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGAGAACTTTTATCTGAGACTGGCTCAAATTTACATTGTGTGCTCTTTGTGTGTCAGCACAAAGAATaGGGGTTTGAAAAATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: LRELLSETGSNLHCVLFVCQHKE*GFEKYS Trigger: TGAATATTTTTCAAACCCCCATTCTTTGTGCTGACA...CACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAAAAGTTCTCTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR TCA 72 bp | CACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTaGGAGGAAGGAGAGGGCTCCGTGGCCCCATTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HCPTSQDQMGHN*EEGEGSVAPFP Trigger: TGGAAATGGGGCCACGGAGCCCTCTCCTTCCTCTCAGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR TCA 72 bp | AAAGGGCCAGGCCCTCTCTATTCCCTCAACCCTAAGTaGGGGAGTCAGAGAGCAGCTGCTGGTGGGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KGPGPLYSLNPK*GSQRAAAGGAA Trigger: GGCTGCCCCACCAGCAGCTGCTCTCTGACTCCCTCACTTAGGGTTGAGGGAATAGAGAGGGCCTGGCCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR GCA 72 bp | GGGGACGATGCTGTCCTCAACTGTCAAAGGCACTACTaGCCAGAGGAAGGGGAGACAGTGTCAGAGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GDDAVLNCQRHY*PEEGETVSEPC Trigger: GCAGGGCTCTGACACTGTCTCCCCTTCCTCTGGGCAGTAGTGCCTTTGACAGTTGAGGACAGCATCGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR GCA 72 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTaGAGAGTAAGGGCAGGCCAGGTGACATGGCGACAA | + |
|
Preference number: 3 (lower is better) Translates to: KERAPWPHFQLL*RVRAGQVTWRQ Trigger: TTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR CCA 72 bp | CAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATaGCGACAACCGTACAGAGGGAAGTCTGTGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLLCRVRAGQVT*RQPYRGKSVAP Trigger: GGGAGCCACAGACTTCCCTCTGTACGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR GCA 72 bp | CTAATGTGGGATTTCAACAGCCAGCCTGAAACACCATaGACTGCCCCACCAGCCAGGACCAGATGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LMWDFNSQPETP*TAPPARTRWAT Trigger: TGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTTGAAATCCCACATTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR TCA 72 bp | AGGGAAGGAACTAATGTGGGATTTCAACAGCCAGCCTaGAACACCATGCACTGCCCCACCAGCCAGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: REGTNVGFQQPA*NTMHCPTSQDQ Trigger: CTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTTGAAATCCCACATTAGTTCCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR CCA 72 bp | CAGGCAGTGGAAAATTCACGCCACCCACTTCTGGAGTaGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QAVENSRHPLLE*WGRCCPQLSKA Trigger: TGCCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR CCA 72 bp | CATGGCAGGCAGTGGAAAATTCACGCCACCCACTTCTaGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HGRQWKIHATHF*SGGDDAVLNCQ Trigger: TTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR GCA 72 bp | AGAGAGCAGCTGCTGGTGGGGCAGCCCCAGCCTTTCTaGTTCACAAACACTAGGGCTCTTCTACAACACTTA | + |
|
Preference number: 3 (lower is better) Translates to: REQLLVGQPQPF*FTNTRALLQHL Trigger: TAAGTGTTGTAGAAGAGCCCTAGTGTTTGTGAAGCAGAAAGGCTGGGGCTGCCCCACCAGCAGCTGCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR CCA 72 bp | GCAGTGGAAAATTCACGCCACCCACTTCTGGAGTGGTaGGGACGATGCTGTCCTCAACTGTCAAAGGCACTA | + |
|
Preference number: 3 (lower is better) Translates to: AVENSRHPLLEW*GRCCPQLSKAL Trigger: TAGTGCCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTACATTCTCTCCTCTGTaGATGACCAAGAAGACGATT | + |
|
Preference number: 3 (lower is better) Translates to: QPETPCTAPPARTRWATTTFSPL*MTKKTI Trigger: AATCGTCTTCTTGGTCATCAACAGAGGAGAGAATGT...AGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGGCAGGCAGTGGAAAATTCACGCCACCCACTTCTGGAGTGGTGGGGACGACATTCTCTCCTCTGTaGATGACCAAGAAGACGATT | + |
|
Preference number: 3 (lower is better) Translates to: AMAGSGKFTPPTSGVVGTTFSPL*MTKKTI Trigger: AATCGTCTTCTTGGTCATCAACAGAGGAGAGAATGT...CGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGAGAACTTTTATCTGAGACTGGCTCAAATTTACATTGTGTGCTCTTTGTGACATTCTCTCCTCTGTaGATGACCAAGAAGACGATT | + |
|
Preference number: 3 (lower is better) Translates to: LRELLSETGSNLHCVLFVTFSPL*MTKKTI Trigger: AATCGTCTTCTTGGTCATCAACAGAGGAGAGAATGT...CACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAAAAGTTCTCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGCCTCAGTCTCCACAGTaGCGCCCCGTCGAGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPPQSPQ*RPVEPR Trigger: GCGAGGCTCGACGGGGCGGCACTGTGGAGACTGAGG...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CACGCCACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCCATCAGCTGGGAGGTaGAGGAGTTGCCGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HATHFWSGGDDAVLNCQRPSAGR*RSCRWG Trigger: GCCCCAGCGGCAACTCCTGCACCTCCCAGCTGATGG...CCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005768.8 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGGTTGCCGCTGGGGCCTaGTCGCCGAGAGAAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPVAAGA*SPRERR Trigger: CCGTCTTTCTCTCGGCGATCAGGCCCCAGCGGCAAC...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005768.8 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGTCCAGATGCTGCTGCTaGGGTACCAGCAGGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPSRCCC*GTSRGP Trigger: GGGGCCCCTGCTGGTACCGCAGCAGCAGCATCTGGA...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107233.9 |
||
| CDS-3UTR GCA 90 bp | GCCATGGCAGGCAGTGGAAAATTCACGCCACCCACTTCTGGAGTGGTGGGGACGTATTCCGGGCAGGGATaGCACCCATGTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMAGSGKFTPPTSGVVGTYSGQG*HPCGPQ Trigger: CTGAGGACCACATGGGTGGCATCCCTGCCCGGAATA...CGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGGCAGCCCCAGCCTTTCTGCTTCACAAACACTAGGGCTCTTCTACAACCCATCAGCTGGGAGGTaGAGGAGTTGCCGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WWGSPSLSASQTLGLFYNPSAGR*RSCRWG Trigger: GCCCCAGCGGCAACTCCTGCACCTCCCAGCTGATGG...GTTGTAGAAGAGCCCTAGTGTTTGTGAAGCAGAAAGGCTGGGGCTGCCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005768.8 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGGATTCCAGATGCTGCTaGGGTACCAGCAGGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPDSRCC*GTSRGP Trigger: GGGGCCCCTGCTGGTACCGCAGCAGCATCTGGAATC...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCAGAGCCCTGCTAGCTCCACATTCTCTCCTCTGTTGATGACCAAGAAGCCTCAGTCTCCACAGTaGCGCCCCGTCGAGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QCQSPASSTFSPLLMTKKPQSPQ*RPVEPR Trigger: GCGAGGCTCGACGGGGCGGCACTGTGGAGACTGAGG...CTTCTTGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGGATTCCAGATGCTGCTaGTGCGGTACCAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPDSRCC*CGTSRG Trigger: GCCCCTGCTGGTACCGCAGCAGCAGCATCTGGAATC...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107233.9 |
||
| CDS-3UTR TCA 90 bp | GTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAAGAATGGGGTTGCCGCTGGGGCCTaGTCGCCGAGAGAAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: VNRRKPPVQQPHVSTKNGVAAGA*SPRERR Trigger: CCGTCTTTCTCTCGGCGATCAGGCCCCAGCGGCAAC...CCCATTCTTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005768.8 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCATACTGTGGCTCTCTTaGTTCCAGATGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSQPETPCTAPPARTRWAILWLS*FQMLLL Trigger: CAGCAGCAGCATCTGGAATCAAGAGAGCCACAGTAT...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107233.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCTCTCTTGATTCCAGATaGTGCTGCGGTACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KERAPWPHFQLLCRVRAGSLDSR*CCGTSR Trigger: CCTGCTGGTACCGCAGCAGCATCTGGAATCAAGAGA...GCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTATACTGTGGCTCTCTTaGTTCCAGATGCTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QPETPCTAPPARTRWATTILWLS*FQMLRY Trigger: GTACCGCAGCATCTGGAATCAAGAGAGCCACAGTAT...AGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 |
||
| CDS-3UTR TCA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCCCGCCGCTTGTAAGTTaGACCCTTCAGGTCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: NSQPETPCTAPPARTRWAPPLVS*TLQVIF Trigger: AAATATGACCTGAAGGGTTCAACTTACAAGCGGCGG...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | GCCATGGCAGGCAGTGGAAAATTCACGCCACCCACTTCTGGAGTGGTGGGGACGCCGCCGCTTGTAAGTTaGACCCTTCAGGTCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: AMAGSGKFTPPTSGVVGTPPLVS*TLQVIF Trigger: AAATATGACCTGAAGGGTTCAACTTACAAGCGGCGG...CGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCACTACTTGATTCCAGATGCTaGTGCTGCGGTACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPLLEWWGRCCPQLSKALLDSRC*CCGTSR Trigger: CCTGCTGGTACCGCAGCAGCAGCATCTGGAATCAAG...TAGTGCCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107233.9 |
||
| CDS-3UTR CCA 90 bp | CACGCCACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGGCATGGTCCATGTTGTaGATGGACATCAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HATHFWSGGDDAVLNCQRAWSML*MDINRL Trigger: CAGCCTGTTGATGTCCATCCACAACATGGACCATGC...CCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCCATATGCATTTTGACTaGCCGAGGCAAGAGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSQPETPCTAPPARTRWAHMHFD*PRQEIV Trigger: AACAATCTCTTGCCTCGGTCAGTCAAAATGCATATG...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CCA 90 bp | CACGCCACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGGGTCCATGTTGTGGATaGACATCAACAGGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HATHFWSGGDDAVLNCQRGPCCG*TSTGCS Trigger: ACTACAGCCTGTTGATGTCCATCCACAACATGGACC...CCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CCA 90 bp | CATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCAGGTGACATGGCGACAACCGGCATGGTCCATGTTGTaGATGGACATCAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HFQLLCRVRAGQVTWRQPAWSML*MDINRL Trigger: CAGCCTGTTGATGTCCATCCACAACATGGACCATGC...CGGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAATATTCCGGGCAGGGATaGCACCCATGTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKGKQEETTSPATPCQHKYSGQG*HPCGPQ Trigger: CTGAGGACCACATGGGTGGCATCCCTGCCCGGAATA...TTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTACCTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| 3UTR CAA 72 bp | TGTCAGAGCCCTGCTAGCTCCACATTCTCTCCTCTGTaGATGACCAAGAAGACGATTCAGCATTCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQSPASSTFSPL*MTKKTIQHSWG Trigger: GCCCCAGGAATGCTGAATCGTCTTCTTGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | CACGCCACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCATATGCATTTTGACTaGCCGAGGCAAGAGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HATHFWSGGDDAVLNCQRHMHFD*PRQEIV Trigger: AACAATCTCTTGCCTCGGTCAGTCAAAATGCATATG...CCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | CACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCACTACCGCCGCTTGTAAGTTaGACCCTTCAGGTCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: HPLLEWWGRCCPQLSKALPPLVS*TLQVIF Trigger: AAATATGACCTGAAGGGTTCAACTTACAAGCGGCGG...TAGTGCCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | GGGTTTGAAAAATATTCAGCTATAGAAGCCATGGCAGGCAGTGGAAAATTCACGGTTGCCGCTGGGGCCTaGTCGCCGAGAGAAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: GFEKYSAIEAMAGSGKFTVAAGA*SPRERR Trigger: CCGTCTTTCTCTCGGCGATCAGGCCCCAGCGGCAAC...CGTGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGAATATTTTTCAAACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005768.8 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | GTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAAGAATGGGATACTGTGGCTCTCTTaGTTCCAGATGCTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VNRRKPPVQQPHVSTKNGILWLS*FQMLLR Trigger: CCGCAGCAGCATCTGGAATCAAGAGAGCCACAGTAT...CCCATTCTTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCCCTGGAAGCAACTTCTaGAGAAATTCTGCTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KERAPWPHFQLLCRVRAGPGSNF*RNSASL Trigger: TAAAGAAGCAGAATTTCTGCAGAAGTTGCTTCCAGG...GCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CCA 90 bp | CACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCACTAGGTCCATGTTGTGGATaGACATCAACAGGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPLLEWWGRCCPQLSKALGPCCG*TSTGCS Trigger: ACTACAGCCTGTTGATGTCCATCCACAACATGGACC...TAGTGCCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CACGCCACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCCTGGAAGCAACTTCTaGAGAAATTCTGCTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HATHFWSGGDDAVLNCQRPGSNF*RNSASL Trigger: TAAAGAAGCAGAATTTCTGCAGAAGTTGCTTCCAGG...CCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGGTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAAATACTGTGGCTCTCTTaGTTCCAGATGCTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKGKQEETTSPATPCQHKILWLS*FQMLRY Trigger: GTACCGCAGCATCTGGAATCAAGAGAGCCACAGTAT...TTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTACCTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTCAGAGCCCTGCTAGCTCCACATTCTCTCCTCTGTTGATGACCAAGAAGCCGCCGCTTGTAAGTTaGACCCTTCAGGTCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: QCQSPASSTFSPLLMTKKPPLVS*TLQVIF Trigger: AAATATGACCTGAAGGGTTCAACTTACAAGCGGCGG...CTTCTTGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGAGAACTTTTATCTGAGACTGGCTCAAATTTACATTGTGTGCTCTTTGTGCCTCAGTCTCCACAGTaGCGCCCCGTCGAGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRELLSETGSNLHCVLFVPQSPQ*RPVEPR Trigger: GCGAGGCTCGACGGGGCGGCACTGTGGAGACTGAGG...CACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAAAAGTTCTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CCA 90 bp | GTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAAGAATGGGGGTCCATGTTGTGGATaGACATCAACAGGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNRRKPPVQQPHVSTKNGGPCCG*TSTGCS Trigger: ACTACAGCCTGTTGATGTCCATCCACAACATGGACC...CCCATTCTTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTTGAAAAATATTCAGCTATAGAAGCCATGGCAGGCAGTGGAAAATTCACGTATTCCGGGCAGGGATaGCACCCATGTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFEKYSAIEAMAGSGKFTYSGQG*HPCGPQ Trigger: CTGAGGACCACATGGGTGGCATCCCTGCCCGGAATA...CGTGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGAATATTTTTCAAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGCAGCCCCAGCCTTTCTGCTTCACAAACACTAGGGCTCTTCTACAACACTCAATCAATGGCTCACTaGAAAGGGAGTACAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPSLSASQTLGLFYNTQSMAH*KGSTSN Trigger: ATTACTTGTACTCCCTTTGCAGTGAGCCATTGATTG...AGTGTTGTAGAAGAGCCCTAGTGTTTGTGAAGCAGAAAGGCTGGGGCTGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | GTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAAGAATGGGCAATCAATGGCTCACTaGAAAGGGAGTACAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VNRRKPPVQQPHVSTKNGQSMAH*KGSTSN Trigger: ATTACTTGTACTCCCTTTGCAGTGAGCCATTGATTG...CCCATTCTTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAACAATCAATGGCTCACTaGAAAGGGAGTACAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EKGKQEETTSPATPCQHKQSMAH*KGSTSN Trigger: ATTACTTGTACTCCCTTTGCAGTGAGCCATTGATTG...TTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTACCTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCAGAGCCCTGCTAGCTCCACATTCTCTCCTCTGTTGATGACCAAGAAGAATTCTGCTTCTTTATaGTGGACGGTCTTAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: QCQSPASSTFSPLLMTKKNSASL*WTVLMM Trigger: CATCATTAAGACCGTCCAGCATAAAGAAGCAGAATT...CTTCTTGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAACCTGGAAGCAACTTCTaGAGAAATTCTGCTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EKGKQEETTSPATPCQHKPGSNF*RNSASL Trigger: TAAAGAAGCAGAATTTCTGCAGAAGTTGCTTCCAGG...TTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTACCTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGAGAACTTTTATCTGAGACTGGCTCAAATTTACATTGTGTGCTCTTTGTGTATTCCGGGCAGGGATaGCACCCATGTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRELLSETGSNLHCVLFVYSGQG*HPCGPQ Trigger: CTGAGGACCACATGGGTGGCATCCCTGCCCGGAATA...CACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAAAAGTTCTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR TCA 90 bp | GGGTTTGAAAAATATTCAGCTATAGAAGCCATGGCAGGCAGTGGAAAATTCACGCATATGCATTTTGACTaGCCGAGGCAAGAGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFEKYSAIEAMAGSGKFTHMHFD*PRQEIV Trigger: AACAATCTCTTGCCTCGGTCAGTCAAAATGCATATG...CGTGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGAATATTTTTCAAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTTGAAAAATATTCAGCTATAGAAGCCATGGCAGGCAGTGGAAAATTCACGAATTCTGCTTCTTTATaGTGGACGGTCTTAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: GFEKYSAIEAMAGSGKFTNSASL*WTVLMM Trigger: CATCATTAAGACCGTCCAGCATAAAGAAGCAGAATT...CGTGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGAATATTTTTCAAACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | AACAGCCAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCCCCGCCGCTTGTAAGTaGAACCCTTCAGGTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: NSQPETPCTAPPARTRWAPAACK*NPSGHI Trigger: AATATGACCTGAAGGGTTCAACTTACAAGCGGCGGG...GGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGGTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAATGGGAGGTGCAGGAGTaGCCGCTGGGGCCTGATCGC | + |
|
Preference number: 5 (lower is better) Translates to: EKGKQEETTSPATPCQHKWEVQE*PLGPDR Trigger: GCGATCAGGCCCCAGCGGCAACTCCTGCACCTCCCA...TTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTACCTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005768.8 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCGATACTGTGGCTCTCTaGATTCCAGATGCTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KERAPWPHFQLLCRVRAGDTVAL*IPDAAA Trigger: CGCAGCAGCATCTGGAATCAAGAGAGCCACAGTATC...GCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTCCCGCCGCTTGTAAGTaGAACCCTTCAGGTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: QPETPCTAPPARTRWATTPAACK*NPSGHI Trigger: AATATGACCTGAAGGGTTCAACTTACAAGCGGCGGG...AGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | GCCATGGCAGGCAGTGGAAAATTCACGCCACCCACTTCTGGAGTGGTGGGGACGCCCGCCGCTTGTAAGTaGAACCCTTCAGGTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: AMAGSGKFTPPTSGVVGTPAACK*NPSGHI Trigger: AATATGACCTGAAGGGTTCAACTTACAAGCGGCGGG...CGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | CACGCCACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGGATACTGTGGCTCTCTaGATTCCAGATGCTGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HATHFWSGGDDAVLNCQRDTVAL*IPDAAV Trigger: TACCGCAGCATCTGGAATCAAGAGAGCCACAGTATC...CCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGAAACACCATGCACTGCCCCACCAGCCAGGACCAGATGGGCCACAACTCCACTAGCTCCAGAATaGGAGAGTTCAATCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QPETPCTAPPARTRWATTPLAPE*ESSING Trigger: GCCATTGATTGAACTCTCCAATTCTGGAGCTAGTGG...AGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | GCCATGGCAGGCAGTGGAAAATTCACGCCACCCACTTCTGGAGTGGTGGGGACGGATGAAGTTGTCTTCTaGTATGTAGTCTCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AMAGSGKFTPPTSGVVGTDEVVF*YVVSPE Trigger: CTCTGGAGAGACTACATACAAGAAGACAACTTCATC...CGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGGGCTCCGTGGCCCCATTTCCAGCTTCTCTGCAGAGTAAGGGCAGGCGATGAAGTTGTCTTCTaGTATGTAGTCTCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KERAPWPHFQLLCRVRAGDEVVF*YVVSPE Trigger: CTCTGGAGAGACTACATACAAGAAGACAACTTCATC...GCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | CACCCACTTCTGGAGTGGTGGGGACGATGCTGTCCTCAACTGTCAAAGGCACTACCACTAGCTCCAGAATaGGAGAGTTCAATCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPLLEWWGRCCPQLSKALPLAPE*ESSING Trigger: GCCATTGATTGAACTCTCCAATTCTGGAGCTAGTGG...TAGTGCCTTTGACAGTTGAGGACAGCATCGTCCCCACCACTCCAGAAGTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCAGAGCCCTGCTAGCTCCACATTCTCTCCTCTGTTGATGACCAAGAAGGATACTGTGGCTCTCTaGATTCCAGATGCTGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QCQSPASSTFSPLLMTKKDTVAL*IPDAAV Trigger: TACCGCAGCATCTGGAATCAAGAGAGCCACAGTATC...CTTCTTGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGGCAGCCCCAGCCTTTCTGCTTCACAAACACTAGGGCTCTTCTACAACGATGAAGTTGTCTTCTaGTATGTAGTCTCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WWGSPSLSASQTLGLFYNDEVVF*YVVSPE Trigger: CTCTGGAGAGACTACATACAAGAAGACAACTTCATC...GTTGTAGAAGAGCCCTAGTGTTTGTGAAGCAGAAAGGCTGGGGCTGCCCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | GTAAACAGGAGGAAACCACCAGTCCAGCAACCCCATGTCAGCACAAAGAATGGGCCACTAGCTCCAGAATaGGAGAGTTCAATCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNRRKPPVQQPHVSTKNGPLAPE*ESSING Trigger: GCCATTGATTGAACTCTCCAATTCTGGAGCTAGTGG...CCCATTCTTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGAGAACTTTTATCTGAGACTGGCTCAAATTTACATTGTGTGCTCTTTGTGTGGGAGGTGCAGGAGTaGCCGCTGGGGCCTGATCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRELLSETGSNLHCVLFVWEVQE*PLGPDR Trigger: GCGATCAGGCCCCAGCGGCAACTCCTGCACCTCCCA...CACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAAAAGTTCTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005768.8 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGAGAACTTTTATCTGAGACTGGCTCAAATTTACATTGTGTGCTCTTTGTGCCCGCCGCTTGTAAGTaGAACCCTTCAGGTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: LRELLSETGSNLHCVLFVPAACK*NPSGHI Trigger: AATATGACCTGAAGGGTTCAACTTACAAGCGGCGGG...CACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAAAAGTTCTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGAGAACTTTTATCTGAGACTGGCTCAAATTTACATTGTGTGCTCTTTGTGGATACTGTGGCTCTCTaGATTCCAGATGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRELLSETGSNLHCVLFVDTVAL*IPDAAA Trigger: AGCAGCAGCATCTGGAATCAAGAGAGCCACAGTATC...CACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAAAAGTTCTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107233.9 |
||
| CDS CAA 72 bp | GCTGGTCTGCGCGTGTCAGCCGAGTACTGTGTGTCATaGCTCGTGGGCTCCCTCTGTGCATGGTCCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AGLRVSAEYCVS*LVGSLCAWSML Trigger: CAACATGGACCATGCACAGAGGGAGCCCACGAGCAATGACACACAGTACTCGGCTGACACGCGCAGACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS GCA 72 bp | CTGGTCTGCGCGTGTCAGCCGAGTACTGTGTGTCATTaGTCGTGGGCTCCCTCTGTGCATGGTCCATGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LVCACQPSTVCH*SWAPSVHGPCC Trigger: ACAACATGGACCATGCACAGAGGGAGCCCACGAGCAATGACACACAGTACTCGGCTGACACGCGCAGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||
| CDS CCA 72 bp | TGCGCGTGTCAGCCGAGTACTGTGTGTCATTGCTCGTaGGCTCCCTCTGTGCATGGTCCATGTTGTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CACQPSTVCHCS*APSVHGPCCGW Trigger: CCATCCACAACATGGACCATGCACAGAGGGAGCCCACGAGCAATGACACACAGTACTCGGCTGACACGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005768.8 ENSMUST00000107232.9 ENSMUST00000107233.9 ENSMUST00000107236.9 |
||