Pregenerated sensors for PIP4P2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028221Ensembl transcript IDs: ENSMUST00000029875.4
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACGGGCAGTGCAAGAGCTaGGTCCATGAATTCCACGCG | + |
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Preference number: 2 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNGQCKS*VHEFHA Trigger: CGCGTGGAATTCATGGACTCAGCTCTTGCACTGCCC...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| 3UTR-3UTR CCA 90 bp | AATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAAACTTCTCAAGGACTACTaGACACTCTCGCCTGCATCA | + |
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Preference number: 2 (lower is better) Translates to: NVKEFRPLTLKEFLLNCKLLKDY*TLSPAS Trigger: TGATGCAGGCGAGAGTGTCCAGTAGTCCTTGAGAAG...TTTGCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACCATTATCTGACCAGGTaGGAAATGGTAAGAGAATCT | + |
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Preference number: 2 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNHYLTR*EMVRES Trigger: AGATTCTCTTACCATTTCTCACCTGGTCAGATAATG...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| 3UTR TCA 72 bp | CGCGAAGTTTTAGGTGACGATGAAACTCTCTCTCTCTaGTCCGTTCTCTTGAAGAAGTCGAGTCATTATCTG | + |
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Preference number: 3 (lower is better) Translates to: REVLGDDETLSL*SVLLKKSSHYL Trigger: CAGATAATGACTCGACTTCTTCAAGAGAACGGATCAGAGAGAGAGAGTTTCATCGTCACCTAAAACTTCGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| 3UTR-3UTR CAA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACAGGAGGATAAATGATTaGAAGGCGTCCAGCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNRRIND*KASSRA Trigger: AGCTCTGCTGGACGCCTTCAAATCATTTATCCTCCT...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| 3UTR-3UTR CAA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAAATTTATAAACACTTCTaGGGGATAGTCCCACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: RTATQCQHVFDEMMKYYKIYKHF*GIVPQQ Trigger: TTGCTGTGGGACTATCCCCAAGAAGTGTTTATAAAT...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| 3UTR TCA 72 bp | GTTCTCTTGAAGAAGTCGAGTCATTATCTGACCAGGTaGGAAATGGTAAGAGAATCTCTAATTCTAACTTTC | + |
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Preference number: 3 (lower is better) Translates to: VLLKKSSHYLTR*EMVRESLILTF Trigger: GAAAGTTAGAATTAGAGATTCTCTTACCATTTCTCACCTGGTCAGATAATGACTCGACTTCTTCAAGAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR GCA 90 bp | TACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCCTGGGGCTGCTTTCCTaGAAGTACGGCGGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: YNVKEFRPLTLKEFLLNCLGLLS*KYGGAV Trigger: CACAGCCCCGCCGTACTTGCAGGAAAGCAGCCCCAG...GCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAATCCCGAATGGGATGCTaGCAGCAGAGGCGAACGTTC | + |
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Preference number: 4 (lower is better) Translates to: RTATQCQHVFDEMMKYYKSRMGC*QQRRTF Trigger: GAACGTTCGCCTCTGCTGTCAGCATCCCATTCGGGA...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR GCA 90 bp | TTCAGAAAAGACTCACAAATTCTTGAGACTACTATACAAACCAGGATGGAATCCGTTCAGCTCTGGGGCTaGTTTCCTGCAAGTACGGCG | + |
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Preference number: 4 (lower is better) Translates to: FRKDSQILETTIQTRMESVQLWG*FPASTA Trigger: CGCCGTACTTGCAGGAAAGCAGCCCCAGAGCTGAAC...GGATTCCATCCTGGTTTGTATAGTAGTCTCAAGAATTTGTGAGTCTTTTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | TACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCTACCCTTGTGCCTTCTaGCTGGATCGGCAATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNVKEFRPLTLKEFLLNCYPCAF*LDRQCR Trigger: CCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTA...GCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| 3UTR CAA 72 bp | ATACAAACCAGGATGGAATCCAGGAGGATAAATGATTaGAAGGCGTCCAGCAGAGCTTCTCAAGGACTACTG | + |
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Preference number: 4 (lower is better) Translates to: IQTRMESRRIND*KASSRASQGLL Trigger: CAGTAGTCCTTGAGAAGCTCTGCTGGACGCCTTCAAATCATTTATCCTCCTGGATTCCATCCTGGTTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAAGGCACACACGACAGTTaGTCACGGGAATACCACTTG | + |
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Preference number: 4 (lower is better) Translates to: RTATQCQHVFDEMMKYYKGTHDS*SREYHL Trigger: CAAGTGGTATTCCCGTGATCAACTGTCGTGTGTGCC...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACGTGGGAGTTCAGCTCTaGGGCTGCTTTCCTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNVGVQL*GCFPAS Trigger: ACTTGCAGGAAAGCAGCCCCAGAGCTGAACTCCCAC...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAACACTTGTTCCTGGACTaGCGATGGCTGTATACGGAG | + |
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Preference number: 4 (lower is better) Translates to: RTATQCQHVFDEMMKYYKHLFLD*RWLYTE Trigger: CTCCGTATACAGCCATCGCCAGTCCAGGAACAAGTG...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | TTCAGAAAAGACTCACAAATTCTTGAGACTACTATACAAACCAGGATGGAATCCCTTGTGCCTTCTGGCTaGATCGGCAATGCAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: FRKDSQILETTIQTRMESLVPSG*IGNAGW Trigger: CCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAG...GGATTCCATCCTGGTTTGTATAGTAGTCTCAAGAATTTGTGAGTCTTTTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAAGTTGCTCTTCAGAAATaGGCATTACGGGGCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RTATQCQHVFDEMMKYYKVALQK*ALRGQG Trigger: ACCTTGGCCCCGTAATGCTCATTTCTGAAGAGCAAC...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | AATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAAAGTGACATTTCCCGAATaGGATGCTGACAGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVKEFRPLTLKEFLLNCKVTFPE*DADSRG Trigger: GCCTCTGCTGTCAGCATCCCATTCGGGAAATGTCAC...TTTGCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAAATCGGCAATGCAGGTTaGGCTGGTTGCTCTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RTATQCQHVFDEMMKYYKIGNAG*AGCSSE Trigger: TTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGAT...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | TTCAGAAAAGACTCACAAATTCTTGAGACTACTATACAAACCAGGATGGAATCCATATCATTCCGATGGTaGCATACGCACAGCAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: FRKDSQILETTIQTRMESISFRW*HTHSSV Trigger: GACGCTGCTGTGCGTATGTCACCATCGGAATGATAT...GGATTCCATCCTGGTTTGTATAGTAGTCTCAAGAATTTGTGAGTCTTTTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR GCA 90 bp | AATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAAAGCAGTGTGGGCATTTTaGCAGAGTGTTGAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVKEFRPLTLKEFLLNCKAVWAF*QSVEPQ Trigger: CTGAGGTTCAACACTCTGGCAAAATGCCCACACTGC...TTTGCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | TACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAGCAAAGCCGTGCTCTaGATAACTGACTCTGATTGC | + |
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Preference number: 4 (lower is better) Translates to: YNVKEFRPLTLKEFLLNCSKAVL*ITDSDC Trigger: GCAATCAGAGTCAGTTATCCAGAGCACGGCTTTGCT...GCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | TACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCGTTTACCATCCAGGTTaGTTAGAGATTGGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: YNVKEFRPLTLKEFLLNCVYHPG*LEIGTH Trigger: GTGTGTGCCAATCTCTAATCAACCTGGATGGTAAAC...GCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR GCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACGCAGGTTGGGCTGGTTaGTCTTCAGAAATGAGCATT | + |
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Preference number: 4 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNAGWAG*SSEMSI Trigger: AATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGC...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR GCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACATAACTGACTCTGATTaGGCCCCAGTAACAAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNITDSD*APVTSS Trigger: CGAGCTTGTTACTGGGGCGCAATCAGAGTCAGTTAT...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACCAATGCAGGTTGGGCTaGTTGCTCTTCAGAAATGAG | + |
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Preference number: 4 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNQCRLG*LLFRNE Trigger: CTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTG...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | AATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAAATTAACCACATGCTGGTaGAGTTTACCATCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: NVKEFRPLTLKEFLLNCKLTTCW*SLPSRL Trigger: CAACCTGGATGGTAAACTTCACCAGCATGTGGTTAA...TTTGCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACATTTTGCCAGAGTGTTaGACCTCAGTTCCATCCACA | + |
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Preference number: 4 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNILPEC*TSVPST Trigger: TGTGGATGGAACTGAGGTTCAACACTCTGGCAAAAT...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACAATACCACTTGTTCCTaGACTGGCGATGGCTGTATA | + |
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Preference number: 4 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNNTTCS*TGDGCI Trigger: TATACAGCCATCGCCAGTCCAGGAACAAGTGGTATT...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CCA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAAAGGTTGATTAGAGATTaGCACACACGACAGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: RTATQCQHVFDEMMKYYKRLIRD*HTRQLI Trigger: GATCAACTGTCGTGTGTGCCAATCTCTAATCAACCT...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR TCA 90 bp | AATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAAAATGTATCCTTACAAATaGGTAGACAATTACAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NVKEFRPLTLKEFLLNCKMYPYK*VDNYKG Trigger: GCCCTTGTAATTGTCTACTCATTTGTAAGGATACAT...TTTGCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR GCA 90 bp | TTCAGAAAAGACTCACAAATTCTTGAGACTACTATACAAACCAGGATGGAATCCTTGAAAAATCTTGTGTaGCAACAGTTAATCCAACTG | + |
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Preference number: 4 (lower is better) Translates to: FRKDSQILETTIQTRMESLKNLV*QQLIQL Trigger: CAGTTGGATTAACTGTTGGCACACAAGATTTTTCAA...GGATTCCATCCTGGTTTGTATAGTAGTCTCAAGAATTTGTGAGTCTTTTCTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS TCA 90 bp | CAGCTCTGGGGCTGCTTTCCTGCAAGTACGGCGGGGCTGTGGGAGTaGCATTTCCCGAATGGGATGCTGACAGCAGAGGCGAACGTTCGT | + |
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Preference number: 5 (lower is better) Translates to: QLWGCFPASTAGLWE*HFPNGMLTAEANVR Trigger: ACGAACGTTCGCCTCTGCTGTCAGCATCCCATTCGGGAAATGTCACTCCCACAGCCCCGCCGTACTTGCAGGAAAGCAGCCCCAGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS GCA 90 bp | GCAGTGCCCGCACACTACCCTTGTGCCTTCTGGCTGGATCGGCAATaGAGGTTGGGCTGGTTGCTCTTCAGAAATGAGCATTACGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVPAHYPCAFWLDRQ*RLGWLLFRNEHYGA Trigger: GGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS GCA 90 bp | CCATCCACAGGAATGTGTTCCCGCAGTGCCCGCACACTACCCTTGTaGCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTGGTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: PSTGMCSRSARTLPL*LLAGSAMQVGLVAL Trigger: AAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGCGGGAACACATTCCTGTGGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 90 bp | AATGTGTTCCCGCAGTGCCCGCACACTACCCTTGTGCCTTCTGGCTaGATCGGCAATGCAGGTTGGGCTGGTTGCTCTTCAGAAATGAGC | + |
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Preference number: 5 (lower is better) Translates to: NVFPQCPHTTLVPSG*IGNAGWAGCSSEMS Trigger: GCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGCGGGAACACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 90 bp | CAGGAATGTGTTCCCGCAGTGCCCGCACACTACCCTTGTGCCTTCTaGCTGGATCGGCAATGCAGGTTGGGCTGGTTGCTCTTCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: QECVPAVPAHYPCAF*LDRQCRLGWLLFRN Trigger: ATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGCGGGAACACATTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 90 bp | AGATTGGCACACACGACAGTTGATCACGGGAATACCACTTGTTCCTaGACTGGCGATGGCTGTATACGGAGGTGGGAGTTCAGCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: RLAHTTVDHGNTTCS*TGDGCIRRWEFSSG Trigger: CCCAGAGCTGAACTCCCACCTCCGTATACAGCCATCGCCAGTCCAGGAACAAGTGGTATTCCCGTGATCAACTGTCGTGTGTGCCAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS GCA 90 bp | ACCCTTGTGCCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTGGTTaGTCTTCAGAAATGAGCATTACGGGGCCAAGGTTAATTATGCGT | + |
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Preference number: 5 (lower is better) Translates to: TLVPSGWIGNAGWAG*SSEMSITGPRLIMR Trigger: ACGCATAATTAACCTTGGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 90 bp | CACTACCCTTGTGCCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTaGTTGCTCTTCAGAAATGAGCATTACGGGGCCAAGGTTAATTAT | + |
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Preference number: 5 (lower is better) Translates to: HYPCAFWLDRQCRLG*LLFRNEHYGAKVNY Trigger: ATAATTAACCTTGGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTCACGGGAATACCACTaGTTCCTGGACTGGCGATGG | + |
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Preference number: 5 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNSREYH*FLDWRW Trigger: CCATCGCCAGTCCAGGAACAAGTGGTATTCCCGTGA...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | AATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAAATGGCACACACGACAGTaGATCACGGGAATACCACTT | + |
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Preference number: 5 (lower is better) Translates to: NVKEFRPLTLKEFLLNCKWHTRQ*ITGIPL Trigger: AAGTGGTATTCCCGTGATCAACTGTCGTGTGTGCCA...TTTGCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | AATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCAAATGCAGGTTGGGCTGGTaGCTCTTCAGAAATGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: NVKEFRPLTLKEFLLNCKCRLGW*LFRNEH Trigger: ATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCA...TTTGCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAAATTGGCGTAGCTTCATaGCAAACTGTGCACTTAACC | + |
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Preference number: 5 (lower is better) Translates to: RTATQCQHVFDEMMKYYKIGVAS*QTVHLT Trigger: GGTTAAGTGCACAGTTTGCAATGAAGCTACGCCAAT...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACCATTTTGCCAGAGTGTaGAACCTCAGTTCCATCCAC | + |
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Preference number: 5 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNHFARV*NLSSIH Trigger: GTGGATGGAACTGAGGTTCAACACTCTGGCAAAATG...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | TACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACTGCCCCAAGACACATAGGTaGCATGAAATCGCCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: YNVKEFRPLTLKEFLLNCPKTHR*HEIALK Trigger: TTTCAAGGCGATTTCATGCAACCTATGTGTCTTGGG...GCAGTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | AGGACTGCAACCCAGTGTCAACATGTCTTTGACGAGATGATGAAGTATTATAAACTAGCAGATAAGCAATaGCCCAAGACACATAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RTATQCQHVFDEMMKYYKLADKQ*PKTHRL Trigger: CAACCTATGTGTCTTGGGCAATTGCTTATCTGCTAG...TTTATAATACTTCATCATCTCGTCAAAGACATGTTGACACTGGGTTGCAGTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS-3UTR CAA 90 bp | TTCTACAATGTGAAAGAGTTTAGACCACTGACTCTCAAGGAATTCCTTCTAAACAGTTTACCATCCAGGTaGATTAGAGATTGGCACACA | + |
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Preference number: 5 (lower is better) Translates to: FYNVKEFRPLTLKEFLLNSLPSR*IRDWHT Trigger: TGTGTGCCAATCTCTAATCAACCTGGATGGTAAACT...GTTTAGAAGGAATTCCTTGAGAGTCAGTGGTCTAAACTCTTTCACATTGTAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS TCA 72 bp | CGGGGCTGTGGGAGTGACATTTCCCGAATGGGATGCTaGCAGCAGAGGCGAACGTTCGTCCACCCCGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RGCGSDISRMGC*QQRRTFVHPVS Trigger: GCTGACGGGGTGGACGAACGTTCGCCTCTGCTGTCAGCATCCCATTCGGGAAATGTCACTCCCACAGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 72 bp | GTTCCCGCAGTGCCCGCACACTACCCTTGTGCCTTCTaGCTGGATCGGCAATGCAGGTTGGGCTGGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VPAVPAHYPCAF*LDRQCRLGWLL Trigger: GAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGCGGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS TCA 72 bp | GGCTGCTTTCCTGCAAGTACGGCGGGGCTGTGGGAGTaGCATTTCCCGAATGGGATGCTGACAGCAGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GCFPASTAGLWE*HFPNGMLTAEA Trigger: CGCCTCTGCTGTCAGCATCCCATTCGGGAAATGTCACTCCCACAGCCCCGCCGTACTTGCAGGAAAGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 72 bp | CCGCAGTGCCCGCACACTACCCTTGTGCCTTCTGGCTaGATCGGCAATGCAGGTTGGGCTGGTTGCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PQCPHTTLVPSG*IGNAGWAGCSS Trigger: TGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 72 bp | AAGTACGGCGGGGCTGTGGGAGTGACATTTCCCGAATaGGATGCTGACAGCAGAGGCGAACGTTCGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: KYGGAVGVTFPE*DADSRGERSST Trigger: GGTGGACGAACGTTCGCCTCTGCTGTCAGCATCCCATTCGGGAAATGTCACTCCCACAGCCCCGCCGTACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 72 bp | ACAGGAATGTGTTCCCGCAGTGCCCGCACACTACCCTaGTGCCTTCTGGCTGGATCGGCAATGCAGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: TGMCSRSARTLP*CLLAGSAMQVG Trigger: CCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGCGGGAACACATTCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 90 bp | GTTCCATCCACAGGAATGTGTTCCCGCAGTGCCCGCACACTACCCTaGTGCCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTGGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VPSTGMCSRSARTLP*CLLAGSAMQVGLVA Trigger: AGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGGCACTGCGGGAACACATTCCTGTGGATGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 90 bp | CCCGCACACTACCCTTGTGCCTTCTGGCTGGATCGGCAATGCAGGTaGGGCTGGTTGCTCTTCAGAAATGAGCATTACGGGGCCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: PAHYPCAFWLDRQCR*GWLLFRNEHYGAKV Trigger: AACCTTGGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 72 bp | TGTGCCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTaGTTGCTCTTCAGAAATGAGCATTACGGGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: CAFWLDRQCRLG*LLFRNEHYGAK Trigger: CTTGGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 72 bp | GCCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTGGTaGCTCTTCAGAAATGAGCATTACGGGGCCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: AFWLDRQCRLGW*LFRNEHYGAKV Trigger: AACCTTGGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS GCA 72 bp | CCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTGGTTaGTCTTCAGAAATGAGCATTACGGGGCCAAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: PSGWIGNAGWAG*SSEMSITGPRL Trigger: TAACCTTGGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS GCA 72 bp | GCACACTACCCTTGTGCCTTCTGGCTGGATCGGCAATaGAGGTTGGGCTGGTTGCTCTTCAGAAATGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: AHYPCAFWLDRQ*RLGWLLFRNEH Trigger: ATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTAGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CCA 72 bp | CACACGACAGTTGATCACGGGAATACCACTTGTTCCTaGACTGGCGATGGCTGTATACGGAGGTGGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: HTTVDHGNTTCS*TGDGCIRRWEF Trigger: GAACTCCCACCTCCGTATACAGCCATCGCCAGTCCAGGAACAAGTGGTATTCCCGTGATCAACTGTCGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 72 bp | TACCCTTGTGCCTTCTGGCTGGATCGGCAATGCAGGTaGGGCTGGTTGCTCTTCAGAAATGAGCATTACGGG | + |
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Preference number: 6 (lower is better) Translates to: YPCAFWLDRQCR*GWLLFRNEHYG Trigger: CCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 90 bp | TACCCTTGTGCCTTCTGGCTGGATCGGCAATGCAGGTTGGGCTGGTaGCTCTTCAGAAATGAGCATTACGGGGCCAAGGTTAATTATGCG | + |
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Preference number: 6 (lower is better) Translates to: YPCAFWLDRQCRLGW*LFRNEHYGAKVNYA Trigger: CGCATAATTAACCTTGGCCCCGTAATGCTCATTTCTGAAGAGCAACCAGCCCAACCTGCATTGCCGATCCAGCCAGAAGGCACAAGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS GCA 72 bp | TTAAGCAAAGCCGTGCTCTGGATAACTGACTCTGATTaGGCCCCAGTAACAAGCTCGGATAAGGCAAATCAA | + |
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Preference number: 6 (lower is better) Translates to: LSKAVLWITDSD*APVTSSDKANQ Trigger: TTGATTTGCCTTATCCGAGCTTGTTACTGGGGCGCAATCAGAGTCAGTTATCCAGAGCACGGCTTTGCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 72 bp | CAATTGCCCAAGACACATAGGTTGCATGAAATCGCCTaGAAAAATCTTGTGTGCCAACAGTTAATCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: QLPKTHRLHEIA*KNLVCQQLIQL Trigger: CAGTTGGATTAACTGTTGGCACACAAGATTTTTCAAGGCGATTTCATGCAACCTATGTGTCTTGGGCAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 72 bp | AACCTAGCAGATAAGCAATTGCCCAAGACACATAGGTaGCATGAAATCGCCTTGAAAAATCTTGTGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: NLADKQLPKTHR*HEIALKNLVCQ Trigger: TTGGCACACAAGATTTTTCAAGGCGATTTCATGCAACCTATGTGTCTTGGGCAATTGCTTATCTGCTAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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| CDS CAA 90 bp | GGCAAATCAAACCTAGCAGATAAGCAATTGCCCAAGACACATAGGTaGCATGAAATCGCCTTGAAAAATCTTGTGTGCCAACAGTTAATC | + |
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Preference number: 6 (lower is better) Translates to: GKSNLADKQLPKTHR*HEIALKNLVCQQLI Trigger: GATTAACTGTTGGCACACAAGATTTTTCAAGGCGATTTCATGCAACCTATGTGTCTTGGGCAATTGCTTATCTGCTAGGTTTGATTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029875.4 |
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