Pregenerated sensors for PIP4P1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035953Ensembl transcript IDs: ENSMUST00000049312.14, ENSMUST00000160538.2, ENSMUST00000160835.9, ENSMUST00000161166.8, ENSMUST00000161669.2, ENSMUST00000162957.8
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTCCAAGAGACCAAGTGCTCGGAGAACAAACTCCCGGCTGAACTaGAAGAGCTGCCTGGACTCACCCATCAGTACTGGTCAGCTCCGT | + |
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Preference number: 1 (lower is better) Translates to: ASKRPSARRTNSRLN*KSCLDSPISTGQLR Trigger: ACGGAGCTGACCAGTACTGATGGGTGAGTCCAGGCAGCTCTTGCAGTTCAGCCGGGAGTTTGTTCTCCGAGCACTTGGTCTCTTGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 90 bp | CTCCCGGCTGAACTGCAAGAGCTGCCTGGACTCACCCATCAGTACTaGTCAGCTCCGTCAGACAAAGAAGGATACAGTGGTGTGGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: LPAELQELPGLTHQY*SAPSDKEGYSGVGL Trigger: TAGGCCCACACCACTGTATCCTTCTTTGTCTGACGGAGCTGACCAGTACTGATGGGTGAGTCCAGGCAGCTCTTGCAGTTCAGCCGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR GCA 90 bp | AGACCAAGTGCTCGGAGAACAAACTCCCGGCTGAACTGCAAGAGCTaGCTGGACTCACCCATCAGTACTGGTCAGCTCCGTCAGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: RPSARRTNSRLNCKS*LDSPISTGQLRQTK Trigger: CTTTGTCTGACGGAGCTGACCAGTACTGATGGGTGAGTCCAGGCAGCTCTTGCAGTTCAGCCGGGAGTTTGTTCTCCGAGCACTTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 90 bp | ATCTCCCACCCCAACCCTGCCCTGGAATGTATTAAGGGACAGGAATaGTTCTCGGGAGCACGTACAGGAAGGGCATGGCTAGAACCATCT | + |
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Preference number: 1 (lower is better) Translates to: ISHPNPALECIKGQE*FSGARTGRAWLEPS Trigger: AGATGGTTCTAGCCATGCCCTTCCTGTACGTGCTCCCGAGAACCATTCCTGTCCCTTAATACATTCCAGGGCAGGGTTGGGGTGGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR CCA 90 bp | CACCCATCAGTACTGGTCAGCTCCGTCAGACAAAGAAGGATACAGTaGTGTGGGCCTACTTTCCCGCCAGTGCCCGCTAAAAGTCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: HPSVLVSSVRQRRIQ*CGPTFPPVPAKSLL Trigger: TAAGAGACTTTTAGCGGGCACTGGCGGGAAAGTAGGCCCACACCACTGTATCCTTCTTTGTCTGACGGAGCTGACCAGTACTGATGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR GCA 90 bp | GTAAAGGAAGAAGCACCAGATATCTTGTGCCTCCAAGAGACCAAGTaGTCGGAGAACAAACTCCCGGCTGAACTGCAAGAGCTGCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: VKEEAPDILCLQETK*SENKLPAELQELPG Trigger: TCCAGGCAGCTCTTGCAGTTCAGCCGGGAGTTTGTTCTCCGAGCACTTGGTCTCTTGGAGGCACAAGATATCTGGTGCTTCTTCCTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 90 bp | CCCAATGCAGGCAGGGGTCTGGTAAGACTGGAATACCGACAGCGTTaGGATGAAGCCTTCCGAAAGTTTCTAAAGGACTTGGCTTCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: PNAGRGLVRLEYRQR*DEAFRKFLKDLASR Trigger: TCTGGAAGCCAAGTCCTTTAGAAACTTTCGGAAGGCTTCATCCCAACGCTGTCGGTATTCCAGTCTTACCAGACCCCTGCCTGCATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 90 bp | AGCTTCCGGCATCTCTACCCCAACACTGCTTACGCTTACACTTTCTaGACTTACATGATGAATGCCCGCTCTAAGAATGTTGGTTGGCGC | + |
|
Preference number: 1 (lower is better) Translates to: SFRHLYPNTAYAYTF*TYMMNARSKNVGWR Trigger: GCGCCAACCAACATTCTTAGAGCGGGCATTCATCATGTAAGTCCAGAAAGTGTAAGCGTAAGCAGTGTTGGGGTAGAGATGCCGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR GCA 90 bp | TCAGACAAAGAAGGATACAGTGGTGTGGGCCTACTTTCCCGCCAGTaGCCGCTAAAAGTCTCTTATGGCATTGGTGAGACCTTAATGACA | + |
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Preference number: 1 (lower is better) Translates to: SDKEGYSGVGLLSRQ*PLKVSYGIGETLMT Trigger: TGTCATTAAGGTCTCACCAATGCCATAAGAGACTTTTAGCGGGCACTGGCGGGAAAGTAGGCCCACACCACTGTATCCTTCTTTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 90 bp | ACTTGGCTTCCAGAAAGCCTCTTGTGCTATGTGGGGATCTCAATGTaGCTCATGAAGAAATTGACCTCCGTAACCCCAAAGGAAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: TWLPESLLCYVGISM*LMKKLTSVTPKETK Trigger: TTTTGTTTCCTTTGGGGTTACGGAGGTCAATTTCTTCATGAGCCACATTGAGATCCCCACATAGCACAAGAGGCTTTCTGGAAGCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 90 bp | ACTTTCTGGACTTACATGATGAATGCCCGCTCTAAGAATGTTGGTTaGCGCCTTGATTACTTTTTGCTTTCCCACTCTCTTTTACCTGCA | + |
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Preference number: 1 (lower is better) Translates to: TFWTYMMNARSKNVG*RLDYFLLSHSLLPA Trigger: TGCAGGTAAAAGAGAGTGGGAAAGCAAAAAGTAATCAAGGCGCCAACCAACATTCTTAGAGCGGGCATTCATCATGTAAGTCCAGAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTCCTGGTAACAGCCTATGTTCCCAATGCAGGCAGGGGTCTGGTAAGACTAGAGCCAGCCCCTGGTaGAGTGCAATAGCAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LCPGNSLCSQCRQGSGKTRASPW*SAIAAA Trigger: TGCTGCTGCTATTGCACTTCACCAGGGGCTGGCTCT...AGTCTTACCAGACCCCTGCCTGCATTGGGAACATAGGCTGTTACCAGGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAAAGAGCCAGCCCCTGGTaGAGTGCAATAGCAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKRASPW*SAIAAA Trigger: TGCTGCTGCTATTGCACTTCACCAGGGGCTGGCTCT...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTCCTGGTAACAGCCTATGTTCCCAATGCAGGCAGGGGTCTGGTAAGACTCAAGGCTCTTGGCAGTaGCCACTGTCCCATCACCCT | + |
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Preference number: 2 (lower is better) Translates to: LCPGNSLCSQCRQGSGKTQGSWQ*PLSHHP Trigger: AGGGTGATGGGACAGTGGTCACTGCCAAGAGCCTTG...AGTCTTACCAGACCCCTGCCTGCATTGGGAACATAGGCTGTTACCAGGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCATCACCCTTTACCTAGCACTGTGATACCCTCCTGCAGTAGCTTCCTGCAGCCCCTGGTGAAGTaGAATAGCAGCAGCAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LSHHPLPSTVIPSCSSFLQPLVK*NSSSKV Trigger: GACCTTGCTGCTGCTATTGCACTTCACCAGGGGCTG...CAGGAAGCTACTGCAGGAGGGTATCACAGTGCTAGGTAAAGGGTGATGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR TCA 90 bp | ATACACATCAGTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGAAGAGACTGGGTATTaGGGCCAGAGCCAGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IHISSYSSVQSSGLPHPTEETGY*GQSQPL Trigger: CAGGGGCTGGCTCTGGCCTCAATACCCAGTCTCTTC...TGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAACTGATGTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAACAGCCCCTGGTGAAGTaGAATAGCAGCAGCAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKQPLVK*NSSSKV Trigger: GACCTTGCTGCTGCTATTGCACTTCACCAGGGGCTG...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGCAGCCCCTGGTGAAGTaGAATAGCAGCAGCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SYSSVQSSGLPHPTGREMQPLVK*NSSSKV Trigger: GACCTTGCTGCTGCTATTGCACTTCACCAGGGGCTG...CATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAACTAAACAGCAACCCCTaGAAGAGAGCAGCCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKLNSNP*KRAASQ Trigger: CTGGCTGGCTGCTCTCTTCCAGGGGTTGCTGTTTAG...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGAAGGAAGGAAGGGACTaGTTCCTTCCTACCTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SYSSVQSSGLPHPTGREMKEGRD*FLPTSP Trigger: GGGAGAGGTAGGAAGGAAGCAGTCCCTTCCTTCCTT...CATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGACCCCAACCCTGCCCTaGAATGTATTAAGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: SYSSVQSSGLPHPTGREMTPTLP*NVLRDR Trigger: CCTGTCCCTTAATACATTCCAGGGCAGGGTTGGGGT...CATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAAACCCCAACCCTGCCCTaGAATGTATTAAGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKTPTLP*NVLRDR Trigger: CCTGTCCCTTAATACATTCCAGGGCAGGGTTGGGGT...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGAAGAAATTGACCTCCGTAACCCCAAAGGAAACAAAAAGAATGCTGGCGAAGAGACTGGGTATTaGGGCCAGAGCCAGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AHEEIDLRNPKGNKKNAGEETGY*GQSQPL Trigger: CAGGGGCTGGCTCTGGCCTCAATACCCAGTCTCTTC...GCCAGCATTCTTTTTGTTTCCTTTGGGGTTACGGAGGTCAATTTCTTCATGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CCA 90 bp | ATACACATCAGTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGTGGGGAGAAGAGACTaGGTATTGAGGCCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: IHISSYSSVQSSGLPHPTVGRRD*VLRPEP Trigger: TGGCTCTGGCCTCAATACCCAGTCTCTTCTCCCCAC...TGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAACTGATGTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR CAA 90 bp | TGGCGCCTTGATTACTTTTTGCTTTCCCACTCTCTTTTACCTGCATaGTGTGACAGCAAGATCCGGTCCAAGGCTCTTGGCAGTGACCAC | + |
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Preference number: 2 (lower is better) Translates to: WRLDYFLLSHSLLPA*CDSKIRSKALGSDH Trigger: GTGGTCACTGCCAAGAGCCTTGGACCGGATCTTGCTGTCACACAATGCAGGTAAAAGAGAGTGGGAAAGCAAAAAGTAATCAAGGCGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCTTTGTCCTGGTAACAGCCTATGTTCCCAATGCAGGCAGGGGTCTGGTAAAGGTTTTGGGGAACTaGTACAAGCTGTACCATTGG | + |
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Preference number: 2 (lower is better) Translates to: ESFVLVTAYVPNAGRGLVKVLGN*YKLYHW Trigger: CCAATGGTACAGCTTGTAGCAGTTCCCCAAAACCTT...TACCAGACCCCTGCCTGCATTGGGAACATAGGCTGTTACCAGGACAAAGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CCA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATAATTAAGGGACAGGAATaGTTCTCGGGAGCACGTACA | + |
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Preference number: 2 (lower is better) Translates to: DESLTSPKTVTLPQPSSIIKGQE*FSGART Trigger: TGTACGTGCTCCCGAGAACCATTCCTGTCCCTTAAT...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAAGTAAAATCGGAAGGAGGAATTCAGGGAAGTACAGGATTAGGGGAACAGTGGGGAGAAGAGACTaGGTATTGAGGCCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TGSKIGRRNSGKYRIRGTVGRRD*VLRPEP Trigger: TGGCTCTGGCCTCAATACCCAGTCTCTTCTCCCCAC...TGTTCCCCTAATCCTGTACTTCCCTGAATTCCTCCTTCCGATTTTACTTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCATGAAGAAATTGACCTCCGTAACCCCAAAGGAAACAAAAAGAATGCTGGCTTCTGTACAGAGCAGTaGCTTACCCCACCCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: AHEEIDLRNPKGNKKNAGFCTEQ*LTPPHR Trigger: CCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAA...GCCAGCATTCTTTTTGTTTCCTTTGGGGTTACGGAGGTCAATTTCTTCATGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGGACTTGGCTTCCAGAAAGCCTCTTGTGCTATGTGGGGATCTCAATGTGATTAAGGGACAGGAATaGTTCTCGGGAGCACGTACA | + |
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Preference number: 2 (lower is better) Translates to: LKDLASRKPLVLCGDLNVIKGQE*FSGART Trigger: TGTACGTGCTCCCGAGAACCATTCCTGTCCCTTAAT...CACATTGAGATCCCCACATAGCACAAGAGGCTTTCTGGAAGCCAAGTCCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAGCGCCAAGGTTTTGGGGAACTGCTACAAGCTGTACCATTGGCTGACATCTAAGAATGTTGGTTaGCGCCTTGATTACTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PRSAKVLGNCYKLYHWLTSKNVG*RLDYFL Trigger: CAAAAAGTAATCAAGGCGCCAACCAACATTCTTAGA...TGTCAGCCAATGGTACAGCTTGTAGCAGTTCCCCAAAACCTTGGCGCTCCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAAGTAAAATCGGAAGGAGGAATTCAGGGAAGTACAGGATTAGGGGAACAATTAAGGGACAGGAATaGTTCTCGGGAGCACGTACA | + |
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Preference number: 2 (lower is better) Translates to: TGSKIGRRNSGKYRIRGTIKGQE*FSGART Trigger: TGTACGTGCTCCCGAGAACCATTCCTGTCCCTTAAT...TGTTCCCCTAATCCTGTACTTCCCTGAATTCCTCCTTCCGATTTTACTTCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR CAA 90 bp | ATGAATGCCCGCTCTAAGAATGTTGGTTGGCGCCTTGATTACTTTTaGCTTTCCCACTCTCTTTTACCTGCATTGTGTGACAGCAAGATC | + |
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Preference number: 2 (lower is better) Translates to: MNARSKNVGWRLDYF*LSHSLLPALCDSKI Trigger: GATCTTGCTGTCACACAATGCAGGTAAAAGAGAGTGGGAAAGCAAAAAGTAATCAAGGCGCCAACCAACATTCTTAGAGCGGGCATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGGACTTGGCTTCCAGAAAGCCTCTTGTGCTATGTGGGGATCTCAATGTGTACGCTTACACTTTCTaGACTTACATGATGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LKDLASRKPLVLCGDLNVYAYTF*TYMMNA Trigger: GGCATTCATCATGTAAGTCCAGAAAGTGTAAGCGTA...CACATTGAGATCCCCACATAGCACAAGAGGCTTTCTGGAAGCCAAGTCCTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCTTTCTTTGTCCCTTTGTGAAAACTACATATTCCCTTTTTCATACACAACTAAACAGCAACCCCTaGAAGAGAGCAGCCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGFLCPFVKTTYSLFHTQLNSNP*KRAASQ Trigger: CTGGCTGGCTGCTCTCTTCCAGGGGTTGCTGTTTAG...TTGTGTATGAAAAAGGGAATATGTAGTTTTCACAAAGGGACAAAGAAAGCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR GCA 72 bp | GCTCGGAGAACAAACTCCCGGCTGAACTGCAAGAGCTaGCTGGACTCACCCATCAGTACTGGTCAGCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: ARRTNSRLNCKS*LDSPISTGQLR Trigger: ACGGAGCTGACCAGTACTGATGGGTGAGTCCAGGCAGCTCTTGCAGTTCAGCCGGGAGTTTGTTCTCCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 72 bp | CCCAACCCTGCCCTGGAATGTATTAAGGGACAGGAATaGTTCTCGGGAGCACGTACAGGAAGGGCATGGCTA | + |
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Preference number: 3 (lower is better) Translates to: PNPALECIKGQE*FSGARTGRAWL Trigger: TAGCCATGCCCTTCCTGTACGTGCTCCCGAGAACCATTCCTGTCCCTTAATACATTCCAGGGCAGGGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGAGAAGAGACTGGGTATaGAGGCCAGAGCCAGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: SYSSVQSSGLPHPTGREMRRDWV*RPEPAP Trigger: AGGGGCTGGCTCTGGCCTCAATACCCAGTCTCTTCT...CATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR GCA 72 bp | GAAGCACCAGATATCTTGTGCCTCCAAGAGACCAAGTaGTCGGAGAACAAACTCCCGGCTGAACTGCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: EAPDILCLQETK*SENKLPAELQE Trigger: CTCTTGCAGTTCAGCCGGGAGTTTGTTCTCCGAGCACTTGGTCTCTTGGAGGCACAAGATATCTGGTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 72 bp | GGGCAATGTTGCCTATTTACCCTAAACAGCAACCCCTaGAAGAGAGCAGCCAGCCAGCAATGGTCTTACCTA | + |
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Preference number: 3 (lower is better) Translates to: GQCCLFTLNSNP*KRAASQQWSYL Trigger: TAGGTAAGACCATTGCTGGCTGGCTGCTCTCTTCCAGGGGTTGCTGTTTAGGGTAAATAGGCAACATTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| 3UTR CCA 72 bp | GGCAGGGGTCTGGTAAGACTGGAATACCGACAGCGTTaGGATGAAGCCTTCCGAAAGTTTCTAAAGGACTTG | + |
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Preference number: 3 (lower is better) Translates to: GRGLVRLEYRQR*DEAFRKFLKDL Trigger: CAAGTCCTTTAGAAACTTTCGGAAGGCTTCATCCCAACGCTGTCGGTATTCCAGTCTTACCAGACCCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTGCAGAAGTCTGGTGTTTTAGCCTTCAGGTGTTTGGTTTTGTATGTGAGAAGAGACTGGGTATaGAGGCCAGAGCCAGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LSLQKSGVLAFRCLVLYVRRDWV*RPEPAP Trigger: AGGGGCTGGCTCTGGCCTCAATACCCAGTCTCTTCT...CACATACAAAACCAAACACCTGAAGGCTAAAACACCAGACTTCTGCAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR-3UTR CAA 90 bp | CCCAGGAGCGCCAAGGTTTTGGGGAACTGCTACAAGCTGTACCATTGGCTGACACGCCTTGATTACTTTTaGCTTTCCCACTCTCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PRSAKVLGNCYKLYHWLTRLDYF*LSHSLL Trigger: TAAAAGAGAGTGGGAAAGCAAAAAGTAATCAAGGCG...TGTCAGCCAATGGTACAGCTTGTAGCAGTTCCCCAAAACCTTGGCGCTCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
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| 3UTR CCA 72 bp | CTTCCTGCCTGGGAGATGGCTCTCTCTGCAGAAGTCTaGTGTTTTAGCCTTCAGGTGTTTGGTTTTGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LPAWEMALSAEV*CFSLQVFGFVC Trigger: ACATACAAAACCAAACACCTGAAGGCTAAAACACCAGACTTCTGCAGAGAGAGCCATCTCCCAGGCAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| 3UTR CCA 72 bp | CCAGAAAGCCTCTTGTGCTATGTGGGGATCTCAATGTaGCTCATGAAGAAATTGACCTCCGTAACCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PESLLCYVGISM*LMKKLTSVTPK Trigger: CTTTGGGGTTACGGAGGTCAATTTCTTCATGAGCCACATTGAGATCCCCACATAGCACAAGAGGCTTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| 3UTR CCA 72 bp | CATCTCTACCCCAACACTGCTTACGCTTACACTTTCTaGACTTACATGATGAATGCCCGCTCTAAGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLYPNTAYAYTF*TYMMNARSKNV Trigger: AACATTCTTAGAGCGGGCATTCATCATGTAAGTCCAGAAAGTGTAAGCGTAAGCAGTGTTGGGGTAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| 3UTR CCA 72 bp | ACTTACATGATGAATGCCCGCTCTAAGAATGTTGGTTaGCGCCTTGATTACTTTTTGCTTTCCCACTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TYMMNARSKNVG*RLDYFLLSHSL Trigger: AAGAGAGTGGGAAAGCAAAAAGTAATCAAGGCGCCAACCAACATTCTTAGAGCGGGCATTCATCATGTAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGGGCTCCGTACGGAGGTaGGGAGGGCGTCAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSPQGKGRQLFGFLVEVQGSVRR*GGRQAS Trigger: GGAGGCCTGACGCCCTCCGCACCTCCGTACGGAGCC...CTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGGGCTCCGTACGGAGGTaGGGAGGGCGTCAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGGSVRR*GGRQAS Trigger: GGAGGCCTGACGCCCTCCGCACCTCCGTACGGAGCC...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATAGGCTCCGTACGGAGGTaGGGAGGGCGTCAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DESLTSPKTVTLPQPSSIGSVRR*GGRQAS Trigger: GGAGGCCTGACGCCCTCCGCACCTCCGTACGGAGCC...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGATCCAGGCAACACGGCTaGATGTCCCTCAGGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: PSYLSPGKREAAVWLPCRSRQHG*MSLRER Trigger: CCGTTCCCTGAGGGACATCCAGCCGTGTTGCCTGGA...TCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGAGGCAGTGAGGGCATCGTaGCAAGGTTCGGTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGKREAAVWLPCRSPEAVRAS*QGSVCE Trigger: TTCACAGACCGAACCTTGGCACGATGCCCTCACTGC...CTCTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | CCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCGCAGTGAGGGCATCGTaGCAAGGTTCGGTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTSPQGKGRQLFGFLVEVAVRAS*QGSVCE Trigger: TTCACAGACCGAACCTTGGCACGATGCCCTCACTGC...GACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATCCAGGCAACACGGCTaGATGTCCCTCAGGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKSRQHG*MSLRER Trigger: CCGTTCCCTGAGGGACATCCAGCCGTGTTGCCTGGA...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | TCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGTCCAGGCAACACGGCTaGATGTCCCTCAGGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SYSSVQSSGLPHPTGREMSRQHG*MSLRER Trigger: CCGTTCCCTGAGGGACATCCAGCCGTGTTGCCTGGA...CATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTTTGTCCTGGTAACAGCCTATGTTCCCAATGCAGGCAGGGGTCTGGTAGACACCCATTGGCTGTaGCTCTGGACTCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESFVLVTAYVPNAGRGLVDTHWL*LWTQRS Trigger: GGACCTCTGAGTCCAGAGCCACAGCCAATGGGTGTC...TACCAGACCCCTGCCTGCATTGGGAACATAGGCTGTTACCAGGACAAAGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR CCA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATAAACGGGGGAAATGCCTaGGGCGGGGCATGTTTACCG | + |
|
Preference number: 4 (lower is better) Translates to: DESLTSPKTVTLPQPSSINGGNA*GGACLP Trigger: CGGTAAACATGCCCCGCCCCAGGCATTTCCCCCGTT...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160835.9 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | ACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGCAAGGCCAGTGGCAGTaGCTGCCAAGAGTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSPQGKGRQLFGFLVEVQQGQWQ*LPRVNQ Trigger: TTGGTTTACTCTTGGCAGTCACTGCCACTGGCCTTG...CTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | CCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAAGGCCAGTGGCAGTaGCTGCCAAGAGTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTSPQGKGRQLFGFLVEVQGQWQ*LPRVNQ Trigger: TTGGTTTACTCTTGGCAGTCACTGCCACTGGCCTTG...GACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGCAAGGCCAGTGGCAGTaGCTGCCAAGAGTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGQGQWQ*LPRVNQ Trigger: TTGGTTTACTCTTGGCAGTCACTGCCACTGGCCTTG...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGCCAAGGTTCGGTCTGTaGATTCTGTCCACAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGPRFGL*ILSTVG Trigger: CCCTACTGTGGACAGAATTCACAGACCGAACCTTGG...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | TATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGTGGGACACCCATTGGCTGTaGCTCTGGACTCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSSVQSSGLPHPTGREMWDTHWL*LWTQRS Trigger: GGACCTCTGAGTCCAGAGCCACAGCCAATGGGTGTC...CCACATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATATCTTGCCTTCCACGTTaGTCGGAGACTGACAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: DESLTSPKTVTLPQPSSISCLPR*SETDRR Trigger: GCGTCTGTCAGTCTCCGATCAACGTGGAAGGCAAGA...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGCCAAGGTTCGGTCTGTaGATTCTGTCCACAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGPRFGL*ILSTET Trigger: CGTTTCTGTGGACAGAATTCACAGACCGAACCTTGG...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | GAGTCCTTTGTCCTGGTAACAGCCTATGTTCCCAATGCAGGCAGGGGTCTGGTACAAGGCCAGTGGCAGTaGCTGCCAAGAGTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESFVLVTAYVPNAGRGLVQGQWQ*LPRVNQ Trigger: TTGGTTTACTCTTGGCAGTCACTGCCACTGGCCTTG...TACCAGACCCCTGCCTGCATTGGGAACATAGGCTGTTACCAGGACAAAGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGGAACAGCCAACAAAATaGCAAATGCCCAGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGEQPTK*QMPRLR Trigger: ACGCAGCCTGGGCATTTGTCATTTTGTTGGCTGTTC...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAGAACAGCCAACAAAATaGCAAATGCCCAGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSYLSPGKREAAVWLPCREQPTK*QMPRLR Trigger: ACGCAGCCTGGGCATTTGTCATTTTGTTGGCTGTTC...TCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGAGGAACAGCCAACAAAATaGCAAATGCCCAGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPGKREAAVWLPCRSPEEQPTK*QMPRLR Trigger: ACGCAGCCTGGGCATTTGTCATTTTGTTGGCTGTTC...CTCTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | TATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGTGGCTCAGAGGTCCTGGATaGACAGGCCCTAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSSVQSSGLPHPTGREMWLRGPG*TGPRLM Trigger: CATCAACCTAGGGCCTGTGCATCCAGGACCTCTGAG...CCACATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS-3UTR GCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAAGCAGTGAGGGCATCGTaGCAAGGTTCGGTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKAVRAS*QGSVCE Trigger: TTCACAGACCGAACCTTGGCACGATGCCCTCACTGC...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATACATTGGCTGTGGCTCTaGACTCAGAGGTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DESLTSPKTVTLPQPSSIHWLWL*TQRSWM Trigger: CATCCAGGACCTCTGAGTCCAGAGCCACAGCCAATG...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS-3UTR CCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAACATTGGCTGTGGCTCTaGACTCAGAGGTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKHWLWL*TQRSWM Trigger: CATCCAGGACCTCTGAGTCCAGAGCCACAGCCAATG...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS-3UTR CCA 90 bp | ATACACATCAGTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAAACGGGGGAAATGCCTaGGGCGGGGCATGTTTACCG | + |
|
Preference number: 4 (lower is better) Translates to: IHISSYSSVQSSGLPHPTNGGNA*GGACLP Trigger: CGGTAAACATGCCCCGCCCCAGGCATTTCCCCCGTT...TGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAACTGATGTGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000160835.9 ENSMUST00000162957.8 |
||
| 3UTR CAA 72 bp | AGAATGCTGGCTTTACTCCCCAGGAGCGCCAAGGTTTaGGGGAACTGCTACAAGCTGTACCATTGGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RMLALLPRSAKV*GNCYKLYHWLT Trigger: TGTCAGCCAATGGTACAGCTTGTAGCAGTTCCCCAAAACCTTGGCGCTCCTGGGGAGTAAAGCCAGCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGAGTCGTCTCCCAATAGATaGCACTTTTCTGCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPGKREAAVWLPCRSPESSPNR*HFSAVR Trigger: CCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGA...CTCTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | ACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGTCGTCTCCCAATAGATaGCACTTTTCTGCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSPQGKGRQLFGFLVEVQSSPNR*HFSAVR Trigger: CCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGA...CTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGATGGCTCTCTCTGCAGAAGTCTGGTGTTTTAGCCTTCAGGTGTTTGGTTCTCAGAGGTCCTGGATaGACAGGCCCTAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GRWLSLQKSGVLAFRCLVLRGPG*TGPRLM Trigger: CATCAACCTAGGGCCTGTGCATCCAGGACCTCTGAG...AACCAAACACCTGAAGGCTAAAACACCAGACTTCTGCAGAGAGAGCCATCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGACAAATGCCCAGGCTaGGTAGATCCCTCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTSPQGKGRQLFGFLVEDKCPG*VDPSIL Trigger: CAATATGGAGGGATCTACGCAGCCTGGGCATTTGTC...TTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | ATACACATCAGTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGACCCTGACACCCATTaGCTGTGGCTCTGGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHISSYSSVQSSGLPHPTDPDTH*LWLWTQ Trigger: CTGAGTCCAGAGCCACAGCCAATGGGTGTCAGGGTC...TGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAACTGATGTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | CCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCTGCAGACACCACATTTaGCTACATGCTGATGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSPQGKGRQLFGFLVEVCRHHI*LHADAS Trigger: AGATGCATCAGCATGTAGTCAAATGTGGTGTCTGCA...GACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | ACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGTGCAGACACCACATTTaGCTACATGCTGATGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSPQGKGRQLFGFLVEVQCRHHI*LHADAS Trigger: AGATGCATCAGCATGTAGTCAAATGTGGTGTCTGCA...CTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGTGCAGACACCACATTTaGCTACATGCTGATGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGCRHHI*LHADAS Trigger: AGATGCATCAGCATGTAGTCAAATGTGGTGTCTGCA...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTTTACCTGCATTGTGTGACAGCAAGATCCGGTCCAAGGCTCTTGGCAGTGCCAAGGTTCGGTCTGTaGATTCTGTCCACAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: LFYLHCVTARSGPRLLAVPRFGL*ILSTET Trigger: CGTTTCTGTGGACAGAATTCACAGACCGAACCTTGG...CACTGCCAAGAGCCTTGGACCGGATCTTGCTGTCACACAATGCAGGTAAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAATCGTCTCCCAATAGATaGCACTTTTCTGCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTSPQGKGRQLFGFLVESSPNR*HFSAVR Trigger: CCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGA...TTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCATCACCCTTTACCTAGCACTGTGATACCCTCCTGCAGTAGCTTCCTGTCGTCTCCCAATAGATaGCACTTTTCTGCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHHPLPSTVIPSCSSFLSSPNR*HFSAVR Trigger: CCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGA...CAGGAAGCTACTGCAGGAGGGTATCACAGTGCTAGGTAAAGGGTGATGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATAGAACAGCCAACAAAATaGCAAATGCCCAGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DESLTSPKTVTLPQPSSIEQPTK*QMPRLR Trigger: ACGCAGCCTGGGCATTTGTCATTTTGTTGGCTGTTC...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATACTTCTTTCCTGGAGGTaGATTCTTGATGGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DESLTSPKTVTLPQPSSILLSWR*ILDGSG Trigger: GCCACTCCCATCAAGAATGCACCTCCAGGAAAGAAG...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGCCCTCCATATTGCTGTaGATGCTTCCATGTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSPQGKGRQLFGFLVEVQPSILL*MLPCTK Trigger: TTTGGTACATGGAAGCATGCACAGCAATATGGAGGG...CTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | TATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGTGGGACAAATGCCCAGGCTaGGTAGATCCCTCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: YSSVQSSGLPHPTGREMWDKCPG*VDPSIL Trigger: CAATATGGAGGGATCTACGCAGCCTGGGCATTTGTC...CCACATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAAGACAAATGCCCAGGCTaGGTAGATCCCTCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: VPIVLYRAVAYPTPQDEKDKCPG*VDPSIL Trigger: CAATATGGAGGGATCTACGCAGCCTGGGCATTTGTC...TTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGGACATACTTCTTTCCTaGAGGTGCATTCTTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGDILLS*RCILDG Trigger: CCCATCAAGAATGCACCTCCAGGAAAGAAGTATGTC...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | TATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGTGGCATTTGACTACATGCTaGTGCATCTTGCCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YSSVQSSGLPHPTGREMWHLTTC*CILPST Trigger: CGTGGAAGGCAAGATGCATCAGCATGTAGTCAAATG...CCACATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAACCCTCCATATTGCTGTaGATGCTTCCATGTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTSPQGKGRQLFGFLVEPSILL*MLPCTK Trigger: TTTGGTACATGGAAGCATGCACAGCAATATGGAGGG...TTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAGTAAAATCGGAAGGAGGAATTCAGGGAAGTACAGGATTAGGGGAACATCTTGCCTTCCACGTTaGTCGGAGACTGACAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSKIGRRNSGKYRIRGTSCLPR*SETDRR Trigger: GCGTCTGTCAGTCTCCGATCAACGTGGAAGGCAAGA...TGTTCCCCTAATCCTGTACTTCCCTGAATTCCTCCTTCCGATTTTACTTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | TATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGTGGCCCTCCATATTGCTGTaGATGCTTCCATGTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YSSVQSSGLPHPTGREMWPSILL*MLPCTK Trigger: TTTGGTACATGGAAGCATGCACAGCAATATGGAGGG...CCACATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR TCA 90 bp | ATACACATCAGTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACACATTTGACTACATGCTaGTGCATCTTGCCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IHISSYSSVQSSGLPHPTHLTTC*CILPST Trigger: CGTGGAAGGCAAGATGCATCAGCATGTAGTCAAATG...TGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAACTGATGTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTTTCCTTTAGACAATCCAAGAGAAATAAAAGGCCCTACTTTCAGCTTGGCGCAGTGAGGGCATCGTaGCAAGGTTCGGTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSFRQSKRNKRPYFQLGAVRAS*QGSVCE Trigger: TTCACAGACCGAACCTTGGCACGATGCCCTCACTGC...GCCAAGCTGAAAGTAGGGCCTTTTATTTCTCTTGGATTGTCTAAAGGAAACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR TCA 90 bp | TGGACTTACATGATGAATGCCCGCTCTAAGAATGTTGGTTGGCGCCTTGATTACCATTTGACTACATGCTaGTGCATCTTGCCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: WTYMMNARSKNVGWRLDYHLTTC*CILPST Trigger: CGTGGAAGGCAAGATGCATCAGCATGTAGTCAAATG...GTAATCAAGGCGCCAACCAACATTCTTAGAGCGGGCATTCATCATGTAAGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAGTAAAATCGGAAGGAGGAATTCAGGGAAGTACAGGATTAGGGGAACACTTCTTTCCTGGAGGTaGATTCTTGATGGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSKIGRRNSGKYRIRGTLLSWR*ILDGSG Trigger: GCCACTCCCATCAAGAATGCACCTCCAGGAAAGAAG...TGTTCCCCTAATCCTGTACTTCCCTGAATTCCTCCTTCCGATTTTACTTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | ATACACATCAGTTCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACACCCTCCATATTGCTGTaGATGCTTCCATGTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IHISSYSSVQSSGLPHPTPSILL*MLPCTK Trigger: TTTGGTACATGGAAGCATGCACAGCAATATGGAGGG...TGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGAACTGATGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAGTAAAATCGGAAGGAGGAATTCAGGGAAGTACAGGATTAGGGGAACAGACAAATGCCCAGGCTaGGTAGATCCCTCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TGSKIGRRNSGKYRIRGTDKCPG*VDPSIL Trigger: CAATATGGAGGGATCTACGCAGCCTGGGCATTTGTC...TGTTCCCCTAATCCTGTACTTCCCTGAATTCCTCCTTCCGATTTTACTTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTTTCTTTGTCCCTTTGTGAAAACTACATATTCCCTTTTTCATACACAATCCAGGCAACACGGCTaGATGTCCCTCAGGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFLCPFVKTTYSLFHTQSRQHG*MSLRER Trigger: CCGTTCCCTGAGGGACATCCAGCCGTGTTGCCTGGA...TTGTGTATGAAAAAGGGAATATGTAGTTTTCACAAAGGGACAAAGAAAGCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| 3UTR CAA 72 bp | CGCTCTAAGAATGTTGGTTGGCGCCTTGATTACTTTTaGCTTTCCCACTCTCTTTTACCTGCATTGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKNVGWRLDYF*LSHSLLPALCD Trigger: GTCACACAATGCAGGTAAAAGAGAGTGGGAAAGCAAAAAGTAATCAAGGCGCCAACCAACATTCTTAGAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160835.9 |
||
| CDS-3UTR CAA 90 bp | ACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGATGGGAGTGGCTTCGTaGCAGACACCACATTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: TSPQGKGRQLFGFLVEVQMGVAS*QTPHLT Trigger: AGTCAAATGTGGTGTCTGCAACGAAGCCACTCCCAT...CTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAAGTCCAGAGATGGGAGTGGCTTCGTaGCAGACACCACATTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSPGKREAAVWLPCRSPEMGVAS*QTPHLT Trigger: AGTCAAATGTGGTGTCTGCAACGAAGCCACTCCCAT...CTCTGGACTTCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS TCA 90 bp | ATGACACTTTTCTGCAGTGAGGGCATCGTGCCAAGGTTCGGTCTGTaGATTCTGTCCACTCCTCCAGGGTTTCCCAATATCCCTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: MTLFCSEGIVPRFGL*ILSTPPGFPNIPPH Trigger: GTGAGGAGGGATATTGGGAAACCCTGGAGGAGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAAAAGTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161669.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTACCTCTCCCCAGGGAAAAGGGAGGCAGCTGTTTGGCTTCCTTGTAGAGTAGATCCCTCCATATaGCTGTGCATGCTTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PSYLSPGKREAAVWLPCRVDPSI*LCMLPC Trigger: ACATGGAAGCATGCACAGCAATATGGAGGGATCTAC...TCTACAAGGAAGCCAAACAGCTGCCTCCCTTTTCCCTGGGGAGAGGTAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGTGTTACTGTTGGTACCAGGCAGCGGTCAGGCACAGACTGCATCAAGGGGGTAGATCCCTCCATATaGCTGTGCATGCTTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CSVTVGTRQRSGTDCIKGVDPSI*LCMLPC Trigger: ACATGGAAGCATGCACAGCAATATGGAGGGATCTAC...CCCCTTGATGCAGTCTGTGCCTGACCGCTGCCTGGTACCAACAGTAACACTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS GCA 90 bp | CAAAATGACAAATGCCCAGGCTGCGTAGATCCCTCCATATTGCTGTaGATGCTTCCATGTACCAAAAGCAAGGCCAGTGGCAGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNDKCPGCVDPSILL*MLPCTKSKASGSDC Trigger: GCAGTCACTGCCACTGGCCTTGCTTTTGGTACATGGAAGCATGCACAGCAATATGGAGGGATCTACGCAGCCTGGGCATTTGTCATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
||
| CDS-3UTR CAA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATAATGGGAGTGGCTTCGTaGCAGACACCACATTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DESLTSPKTVTLPQPSSIMGVAS*QTPHLT Trigger: AGTCAAATGTGGTGTCTGCAACGAAGCCACTCCCAT...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CAA 90 bp | TATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGTGGATGGGAGTGGCTTCGTaGCAGACACCACATTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: YSSVQSSGLPHPTGREMWMGVAS*QTPHLT Trigger: AGTCAAATGTGGTGTCTGCAACGAAGCCACTCCCAT...CCACATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS TCA 90 bp | CTCTTCCTAGGATATCGTCTCCCAATAGATGACACTTTTCTGCAGTaGGGGCATCGTGCCAAGGTTCGGTCTGTGAATTCTGTCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFLGYRLPIDDTFLQ*GHRAKVRSVNSVHS Trigger: GGAGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGATATCCTAGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161669.2 |
||
| CDS-3UTR CAA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATACACAGAAACGTGTTCTaGCAATGTCCACAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: DESLTSPKTVTLPQPSSIHRNVF*QCPQMT Trigger: GGTCATCTGTGGACATTGCAAGAACACGTTTCTGTG...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS-3UTR CAA 90 bp | GATGAGTCCCTAACCTCTCCCAAGACAGTGACCCTACCTCAGCCCAGTTCAATAGTAGATCCCTCCATATaGCTGTGCATGCTTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: DESLTSPKTVTLPQPSSIVDPSI*LCMLPC Trigger: ACATGGAAGCATGCACAGCAATATGGAGGGATCTAC...TATTGAACTGGGCTGAGGTAGGGTCACTGTCTTGGGAGAGGTTAGGGACTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS-3UTR CAA 90 bp | TCCTATAGTTCTGTACAGAGCAGTGGCTTACCCCACCCCACAGGACGAGAAATGGTAGATCCCTCCATATaGCTGTGCATGCTTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SYSSVQSSGLPHPTGREMVDPSI*LCMLPC Trigger: ACATGGAAGCATGCACAGCAATATGGAGGGATCTAC...CATTTCTCGTCCTGTGGGGTGGGGTAAGCCACTGCTCTGTACAGAACTATAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS TCA 90 bp | CTCTTCCTAGGATATCGTCTCCCAATAGATGACACTTTTCTGCAGTaGGGGCATCGTGCCAAGGTTCGGTCTGTGAATTCTGTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFLGYRLPIDDTFLQ*GHRAKVRSVNSVHR Trigger: TCTGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGATATCCTAGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
||
| CDS TCA 90 bp | AAGCCCAATAAAGGGCCCGACCCAAACATAGAACAGCCAACAAAATaGCAAATGCCCAGGCTGCGTAGATCCCTCCATATTGCTGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KPNKGPDPNIEQPTK*QMPRLRRSLHIAVH Trigger: ATGCACAGCAATATGGAGGGATCTACGCAGCCTGGGCATTTGTCATTTTGTTGGCTGTTCTATGTTTGGGTCGGGCCCTTTATTGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
||
| CDS TCA 90 bp | CTCTTCCTAGGATATCGTCTCCCAATAGATGACACTTTTCTGCAGTaGGGGCATCGTGCCAAGGTTCGGTCTGTGAATTCTGTCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLGYRLPIDDTFLQ*GHRAKVRSVNSVHS Trigger: ACTGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGATATCCTAGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS CCA 90 bp | GTGAGGGCATCGTGCCAAGGTTCGGTCTGTGAATTCTGTCCACTATaGAAAAAGAAGAACAGCCATAGAAAGAAGGCTCTCCTCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRASCQGSVCEFCPL*KKKNSHRKKALLHE Trigger: CTCATGGAGGAGAGCCTTCTTTCTATGGCTGTTCTTCTTTTTCCATAGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160538.2 |
||
| CDS TCA 90 bp | CTCTTCCTAGGATATCGTCTCCCAATAGATGACACTTTTCTGCAGTaGGGGCATCGTGCCAAGGTTCGGTCTGTGAATTCTGTCCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: LFLGYRLPIDDTFLQ*GHRAKVRSVNSVHY Trigger: ATAGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGATATCCTAGGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160538.2 |
||
| CDS TCA 90 bp | ATTGCTGTGCATGCTTCCATGTACCAAAAGCAAGGCCAGTGGCAGTaGCTGCCAAGAGTAAACCAAGCAAGAAGCAGCAAATACATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IAVHASMYQKQGQWQ*LPRVNQARSSKYIS Trigger: AGAGATGTATTTGCTGCTTCTTGCTTGGTTTACTCTTGGCAGTCACTGCCACTGGCCTTGCTTTTGGTACATGGAAGCATGCACAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
||
| CDS GCA 90 bp | GGGAGGAGGAAATTCTTTTCAGGATTTACTACTATTCCTAGTACTTaGCTCCTCCAGGGTTTCCCAATATCCCTCCTCACCAGAAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRRKFFSGFTTIPST*LLQGFPISLLTRNV Trigger: CACGTTTCTGGTGAGGAGGGATATTGGGAAACCCTGGAGGAGGCAAGTACTAGGAATAGTAGTAAATCCTGAAAAGAATTTCCTCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160538.2 |
||
| CDS GCA 72 bp | CTGGGGCGGGGCATGTTTACCGGCTCCGTACGGAGGTaGGGAGGGCGTCAGGCCTCCACCGGGCCCGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGRGMFTGSVRR*GGRQASTGPGR Trigger: GCGACCGGGCCCGGTGGAGGCCTGACGCCCTCCGCACCTCCGTACGGAGCCGGTAAACATGCCCCGCCCCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160538.2 ENSMUST00000160835.9 ENSMUST00000162957.8 |
||
| CDS GCA 72 bp | CTCAGGGAACGGGGGAAATGCGGCTCCGTACGGAGGTaGGGAGGGCGTCAGGCCTCCACCGGGCCCGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRERGKCGSVRR*GGRQASTGPGR Trigger: GCGACCGGGCCCGGTGGAGGCCTGACGCCCTCCGCACCTCCGTACGGAGCCGCATTTCCCCCGTTCCCTGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000161166.8 |
||
| CDS TCA 72 bp | TTCTGCAGTGAGGGCATCGTGCCAAGGTTCGGTCTGTaGATTCTGTCCACAGTAGGGCCGAGGGCAGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FCSEGIVPRFGL*ILSTVGPRAGN Trigger: ATTGCCTGCCCTCGGCCCTACTGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161166.8 ENSMUST00000162957.8 |
||
| CDS TCA 72 bp | TTCTGCAGTGAGGGCATCGTGCCAAGGTTCGGTCTGTaGATTCTGTCCACTCCTCCAGGGTTTCCCAATATC | + |
|
Preference number: 6 (lower is better) Translates to: FCSEGIVPRFGL*ILSTPPGFPNI Trigger: GATATTGGGAAACCCTGGAGGAGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161669.2 |
||
| CDS CAA 72 bp | GGGCATCGGACATACTTCTTTCCTGGAGGTGCATTCTaGATGGGAGTGGCTTCGTTGCAGACACCACATTTG | + |
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Preference number: 6 (lower is better) Translates to: GHRTYFFPGGAF*MGVASLQTPHL Trigger: CAAATGTGGTGTCTGCAACGAAGCCACTCCCATCAAGAATGCACCTCCAGGAAAGAAGTATGTCCGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049312.14 ENSMUST00000160538.2 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000162957.8 |
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| CDS CAA 72 bp | GGTTTCCCAATATCCCTCCTCACCAGAAACGTGTTCTaGCAATGTCCACAGATGACCCTGACACCCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: GFPISLLTRNVF*QCPQMTLTPIG Trigger: GCCAATGGGTGTCAGGGTCATCTGTGGACATTGCAAGAACACGTTTCTGGTGAGGAGGGATATTGGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160538.2 |
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| CDS CAA 90 bp | AGCCAACAAAATGACAAATGCCCAGGCTGCGTAGATCCCTCCATATaGCTGTGCATGCTTCCATGTACCAAAAGCAAGGCCAGTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SQQNDKCPGCVDPSI*LCMLPCTKSKASGS Trigger: ACTGCCACTGGCCTTGCTTTTGGTACATGGAAGCATGCACAGCAATATGGAGGGATCTACGCAGCCTGGGCATTTGTCATTTTGTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
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| CDS TCA 72 bp | TTCTGCAGTGAGGGCATCGTGCCAAGGTTCGGTCTGTaGATTCTGTCCACAGAAACGTGTTCTTGCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: FCSEGIVPRFGL*ILSTETCSCNV Trigger: GACATTGCAAGAACACGTTTCTGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 |
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| CDS CAA 72 bp | AATGACAAATGCCCAGGCTGCGTAGATCCCTCCATATaGCTGTGCATGCTTCCATGTACCAAAAGCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: NDKCPGCVDPSI*LCMLPCTKSKA Trigger: GGCCTTGCTTTTGGTACATGGAAGCATGCACAGCAATATGGAGGGATCTACGCAGCCTGGGCATTTGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
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| CDS TCA 72 bp | GGATATCGTCTCCCAATAGATGACACTTTTCTGCAGTaGGGGCATCGTGCCAAGGTTCGGTCTGTGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: GYRLPIDDTFLQ*GHRAKVRSVNS Trigger: AGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGATATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000049312.14 ENSMUST00000160538.2 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
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| CDS TCA 72 bp | CATGCTTCCATGTACCAAAAGCAAGGCCAGTGGCAGTaGCTGCCAAGAGTAAACCAAGCAAGAAGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: HASMYQKQGQWQ*LPRVNQARSSK Trigger: TTTGCTGCTTCTTGCTTGGTTTACTCTTGGCAGTCACTGCCACTGGCCTTGCTTTTGGTACATGGAAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049312.14 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
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| CDS TCA 72 bp | TTCTGCAGTGAGGGCATCGTGCCAAGGTTCGGTCTGTaGATTCTGTCCACTATGGAAAAAGAAGAACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: FCSEGIVPRFGL*ILSTMEKEEQP Trigger: TGGCTGTTCTTCTTTTTCCATAGTGGACAGAATTCACAGACCGAACCTTGGCACGATGCCCTCACTGCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160538.2 |
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| CDS TCA 72 bp | AATACATCTCTTCCTAGGATATCGTCTCCCAATAGATaGCACTTTTCTGCAGTGAGGGCATCGTGCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: NTSLPRISSPNR*HFSAVRASCQG Trigger: ACCTTGGCACGATGCCCTCACTGCAGAAAAGTGTCATCTATTGGGAGACGATATCCTAGGAAGAGATGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049312.14 ENSMUST00000160538.2 ENSMUST00000160835.9 ENSMUST00000161166.8 ENSMUST00000161669.2 ENSMUST00000162957.8 |
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| CDS GCA 72 bp | AAATTCTTTTCAGGATTTACTACTATTCCTAGTACTTaGCTCCTCCAGGGTTTCCCAATATCCCTCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: KFFSGFTTIPST*LLQGFPISLLT Trigger: GGTGAGGAGGGATATTGGGAAACCCTGGAGGAGGCAAGTACTAGGAATAGTAGTAAATCCTGAAAAGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160538.2 |
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