Pregenerated sensors for PIP4K2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025417Ensembl transcript IDs: ENSMUST00000013970.9
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTACTTCCCAGGGCCAGGAGTGCAGGCGTGCACCGCCACGCCTaGCTTAAGTGGTGCTGGGGGTGGATCCCAGAGCTTTGTACATGC | + |
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Preference number: 1 (lower is better) Translates to: PLLPRARSAGVHRHA*LKWCWGWIPELCTC Trigger: GCATGTACAAAGCTCTGGGATCCACCCCCAGCACCACTTAAGCCAGGCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGAAGTAGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | CACCCAGGCAATGAACCCTGCACTCCGACCTGTCCCGGCCTCTACTaGTCTCCCTGCTCACCAGCAAGGCACAGGGTTGTGGGAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: HPGNEPCTPTCPGLY*SPCSPARHRVVGRA Trigger: TGCTCTTCCCACAACCCTGTGCCTTGCTGGTGAGCAGGGAGAGCAGTAGAGGCCGGGACAGGTCGGAGTGCAGGGTTCATTGCCTGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR TCA 90 bp | AGCCCAGGAGTAGTGAGACAGGAAGAAAGGGTGTCACCCAGGCAATaGACCCTGCACTCCGACCTGTCCCGGCCTCTACTGCTCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: SPGVVRQEERVSPRQ*TLHSDLSRPLLLSL Trigger: CAGGGAGAGCAGTAGAGGCCGGGACAGGTCGGAGTGCAGGGTTCATTGCCTGGGTGACACCCTTTCTTCCTGTCTCACTACTCCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | ACTCCCCACCTGACCTCCAGGCCAGACTGTCCATGTGTGAATGCCTaGACCCACATCTGGAGCATCCTGAAAGCCCTCCATTCCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TPHLTSRPDCPCVNA*THIWSILKALHSRA Trigger: AGCCCTGGAATGGAGGGCTTTCAGGATGCTCCAGATGTGGGTGCAGGCATTCACACATGGACAGTCTGGCCTGGAGGTCAGGTGGGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | GACCACTCCCCACCTGACCTCCAGGCCAGACTGTCCATGTGTGAATaGCTGCACCCACATCTGGAGCATCCTGAAAGCCCTCCATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: DHSPPDLQARLSMCE*LHPHLEHPESPPFQ Trigger: CTGGAATGGAGGGCTTTCAGGATGCTCCAGATGTGGGTGCAGGCATTCACACATGGACAGTCTGGCCTGGAGGTCAGGTGGGGAGTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | GGCTTCTCCCTGAGGACCTCATGGACACACAGCAAAGCAGCTCCTTaGCTTCAATGCCCACCCCACCTCCAGAGCGCCAAACAGCGAAGA | + |
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Preference number: 1 (lower is better) Translates to: GFSLRTSWTHSKAAP*LQCPPHLQSAKQRR Trigger: TCTTCGCTGTTTGGCGCTCTGGAGGTGGGGTGGGCATTGAAGGCAAGGAGCTGCTTTGCTGTGTGTCCATGAGGTCCTCAGGGAGAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | CTCCATCATCTGCATAGTCACAAAAGTCCGCTTAGGCTTAGGTCCTaGCTTGTGAGGTGCCAGCCTGCTGACCACTCCCCACCTGACCTC | + |
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Preference number: 1 (lower is better) Translates to: LHHLHSHKSPLRLRS*LVRCQPADHSPPDL Trigger: GAGGTCAGGTGGGGAGTGGTCAGCAGGCTGGCACCTCACAAGGCAGGACCTAAGCCTAAGCGGACTTTTGTGACTATGCAGATGATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | CAACCAGAAAGGGTTTTGAGAAGGAGGGGGAGTTCTAGGTACACATaGCCCAGGGATGCGGAGGCTCCTTCACTCGAGAGCTCTATCCTC | + |
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Preference number: 1 (lower is better) Translates to: QPERVLRRRGSSRYT*PRDAEAPSLESSIL Trigger: GAGGATAGAGCTCTCGAGTGAAGGAGCCTCCGCATCCCTGGGGCATGTGTACCTAGAACTCCCCCTCCTTCTCAAAACCCTTTCTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | CAGACATTCAGTTTCTTCCACTCAGCAAAAGTGCATCCAGGCAGTTaGTTGAGCCAAGTCCACTGTTCAGTCAGGTCCCGAAGATGGCAA | + |
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Preference number: 1 (lower is better) Translates to: QTFSFFHSAKVHPGS*LSQVHCSVRSRRWQ Trigger: TTGCCATCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACTGAATGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR TCA 90 bp | CATTCAGTTTCTTCCACTCAGCAAAAGTGCATCCAGGCAGTTGCTTaGGCCAAGTCCACTGTTCAGTCAGGTCCCGAAGATGGCAAACAA | + |
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Preference number: 1 (lower is better) Translates to: HSVSSTQQKCIQAVA*AKSTVQSGPEDGKQ Trigger: TTGTTTGCCATCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | AGCCCTCCATTCCAGGGCTTACCAGGGAGGAAGCATGCCACAAAGTaGCCCATAAAAGTATCAGCAAAATCCAGACATTCAGTTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SPPFQGLPGRKHATK*PIKVSAKSRHSVSS Trigger: GGAAGAAACTGAATGTCTGGATTTTGCTGATACTTTTATGGGGCACTTTGTGGCATGCTTCCTCCCTGGTAAGCCCTGGAATGGAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CCA 90 bp | GTCTGGGGTGGGCGAGAAAACCCTATCCACCAGAAGGAAGTTATTTaGATGGAAGGAGCCTGCAGCCTGAATTTAGCAAAGAAGAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: VWGGRENPIHQKEVI*MEGACSLNLAKKRS Trigger: ACTTCTCTTCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAAATAACTTCCTTCTGGTGGATAGGGTTTTCTCGCCCACCCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CCA 90 bp | AAAGAAGGCCATCTGTCCCCTGGGAGACACATTAGCAGTGGAAGATaGGACAGAATAACAACTCCAACCAGAAAGGGTTTTGAGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KEGHLSPGRHISSGR*DRITTPTRKGFEKE Trigger: CTCCTTCTCAAAACCCTTTCTGGTTGGAGTTGTTATTCTGTCCCATCTTCCACTGCTAATGTGTCTCCCAGGGGACAGATGGCCTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 90 bp | GAAAACCCTATCCACCAGAAGGAAGTTATTTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAGAAGAGAAGTAACGGCCAAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: ENPIHQKEVIWMEGA*SLNLAKKRSNGQVQ Trigger: CTGGACTTGGCCGTTACTTCTCTTCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAAATAACTTCCTTCTGGTGGATAGGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGAGGGGGAGTTCTAGGTACACATGCCCCAGGGATGCGGAGGCTCCTTCAGTGTCACCCAGGCAATaGACCCTGCACTCCGACCTG | + |
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Preference number: 2 (lower is better) Translates to: RRRGSSRYTCPRDAEAPSVSPRQ*TLHSDL Trigger: CAGGTCGGAGTGCAGGGTTCATTGCCTGGGTGACAC...TGAAGGAGCCTCCGCATCCCTGGGGCATGTGTACCTAGAACTCCCCCTCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | GGCAACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACAGCAAAGCAGCTCCTTaGCTTCAATGCCCACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: GNTAHDHSRTVRPQLLRDSKAAP*LQCPPH Trigger: GTGGGGTGGGCATTGAAGGCAAGGAGCTGCTTTGCT...GTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTGGGGTGGGAGAACGGGAACAGTCGGGAACAGTCGTTGCTCCACAGGGACCATGTGTGAATGCCTaGACCCACATCTGGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: WGGVGEREQSGTVVAPQGPCVNA*THIWSI Trigger: GATGCTCCAGATGTGGGTGCAGGCATTCACACATGG...TCCCTGTGGAGCAACGACTGTTCCCGACTGTTCCCGTTCTCCCACCCCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | AACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACCGGCAACAGGGGAAAGGTTaGTTGAGGGATGGGAGACTC | + |
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Preference number: 2 (lower is better) Translates to: NTAHDHSRTVRPQLLRDRQQGKG*LRDGRL Trigger: GAGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTG...CCGGTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGAGCAGGAGGGCTTACTaGGAGCAAGGAGGGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LWRGLGGLSYGSDSSLGASRRAY*EQGGRA Trigger: TGCCCTCCCTCCTTGCTCCCAGTAAGCCCTCCTGCT...CGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGGAGGCCTGCACCCACATCTaGAGCATCCTGAAAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: WRGLGGLSYGSDSSLGAEACTHI*SILKAL Trigger: GAGGGCTTTCAGGATGCTCCAGATGTGGGTGCAGGC...CTCCGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACAAGTGGTGCTGGGGGTaGATCCCAGAGCTTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: GNTAHDHSRTVRPQLLRDKWCWG*IPELCT Trigger: TGTACAAAGCTCTGGGATCCACCCCCAGCACCACTT...GTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAGGTGGGCTTCTCCCTGAGGACCTCATGGACACACAGCAAAGCAGCTCCATCCAGGCAGTTGCTTaGGCCAAGTCCACTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EGGGLLPEDLMDTQQSSSIQAVA*AKSTVQ Trigger: CTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGAT...GGAGCTGCTTTGCTGTGTGTCCATGAGGTCCTCAGGGAGAAGCCCACCTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CCA 90 bp | AACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACCGGTCCTGTTTCCTTGGCTaGCCTCAACCTCGTCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: NTAHDHSRTVRPQLLRDRSCFLG*PQPRQV Trigger: TACTTGACGAGGTTGAGGCCAGCCAAGGAAACAGGA...CCGGTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 90 bp | GATGGCAACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTaGTTAAGGGACCGGAGTCACTTATTGCATTCAACAGGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: DGNTAHDHSRTVRPQ*LRDRSHLLHSTGER Trigger: CCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTTGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGCTTTACAGGCACGAGCTGGGAGAGCTAAGATGCCTAGCAGGTCCTCTCATTGAGTTATGGCTCTaGCTCCTCTCTGGGGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: CWLYRHELGELRCLAGPLIELWL*LLSGGG Trigger: TCCGCCCCCAGAGAGGAGTCAGAGCCATAACTCAAT...GAGAGGACCTGCTAGGCATCTTAGCTCTCCCAGCTCGTGCCTGTAAAGCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | GATGACCTTGAATGCCCCATCCTGCTTACCACTACTTCCCAGGGCCAGGAGTGCAGTTCTAGGTACACATaGCCCAGGGATGCGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: DDLECPILLTTTSQGQECSSRYT*PRDAEA Trigger: AGCCTCCGCATCCCTGGGGCATGTGTACCTAGAACT...GCACTCCTGGCCCTGGGAAGTAGTGGTAAGCAGGATGGGGCATTCAAGGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTTGTTAAGGGACCGGAGTCACTTATTGCATTCAACAGGGGAAAGGTTGCTTTCCCAGGGCCAGGAGTaGAGGCGTGCACCGCCACGC | + |
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Preference number: 2 (lower is better) Translates to: QLLRDRSHLLHSTGERLLSQGQE*RRAPPR Trigger: GCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGA...AAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCCTTAACAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | GATGACCTTGAATGCCCCATCCTGCTTACCACTACTTCCCAGGGCCAGGAGTGCCTGTCCATGTGTGAATaGCTGCACCCACATCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: DDLECPILLTTTSQGQECLSMCE*LHPHLE Trigger: CTCCAGATGTGGGTGCAGGCATTCACACATGGACAG...GCACTCCTGGCCCTGGGAAGTAGTGGTAAGCAGGATGGGGCATTCAAGGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 90 bp | TGGCGTGCATTAATATTCAGCTGTCTTTGGAGAGGACTGGGTGGATaGAGTTATGGCTCTGACTCCTCTCTGGGGGCGGAGAGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: WRALIFSCLWRGLGG*SYGSDSSLGAERGD Trigger: ATCTCCCCTCTCCGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAGACAGCTGAATATTAATGCACGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | AACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACCGGATTCTGAGGATGGCGTaGATTAATATTCAGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: NTAHDHSRTVRPQLLRDRILRMA*INIQLS Trigger: AGACAGCTGAATATTAATGCACGCCATCCTCAGAAT...CCGGTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGGAGGTGGGCTTCTCCCTGAGGACCTCATGGACACACAGCAAAGCAGCTTCATTTTCCCCAAGATaGTCTCCTGTTTCCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VREVGFSLRTSWTHSKAASFSPR*SPVSLA Trigger: AGCCAAGGAAACAGGAGACCATCTTGGGGAAAATGA...AGCTGCTTTGCTGTGTGTCCATGAGGTCCTCAGGGAGAAGCCCACCTCCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTTGTTAAGGGACCGGAGTCACTTATTGCATTCAACAGGGGAAAGGTTGCTTTGTCCCGGCCTCTACTaGTCTCCCTGCTCACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QLLRDRSHLLHSTGERLLCPGLY*SPCSPA Trigger: TGCTGGTGAGCAGGGAGAGCAGTAGAGGCCGGGACA...AAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCCTTAACAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGCTTTACAGGCACGAGCTGGGAGAGCTAAGATGCCTAGCAGGTCCTCTCATCCTCCCCAAATTATaGAGATGGTACTGTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: CWLYRHELGELRCLAGPLILPKL*RWYCSP Trigger: AGGGGAACAGTACCATCTCCATAATTTGGGGAGGAT...GAGAGGACCTGCTAGGCATCTTAGCTCTCCCAGCTCGTGCCTGTAAAGCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 90 bp | CCAGACATTCAGTTTCTTCCACTCAGCAAAAGTGCATCCAGGCAGTaGCTTGAGCCAAGTCCACTGTTCAGTCAGGTCCCGAAGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: PDIQFLPLSKSASRQ*LEPSPLFSQVPKMA Trigger: TGCCATCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACTGAATGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTAGTGAGACAGGAAGAAAGGGTGTCACCCAGGCAATGAACCCTGCACTCTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RSSETGRKGVTQAMNPALWMEGA*SLNLAK Trigger: CTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCA...GAGTGCAGGGTTCATTGCCTGGGTGACACCCTTTCTTCCTGTCTCACTACTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | TTGAACTCTCAGAGCCTCCTGAGTGCTGGCTTTACAGGCACGAGCTGGGAGAGCAAGCATGCCACAAAGTaGCCCATAAAAGTATCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LNSQSLLSAGFTGTSWESKHATK*PIKVSA Trigger: TGCTGATACTTTTATGGGGCACTTTGTGGCATGCTT...GCTCTCCCAGCTCGTGCCTGTAAAGCCAGCACTCAGGAGGCTCTGAGAGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAGATGGGACAGAATAACAACTCCAACCAGAAAGGGTTTTGAGAAGGAGTCCTGCCTTGTGAGGTaGCAGCCTGCTGACCACTCC | + |
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Preference number: 2 (lower is better) Translates to: SGRWDRITTPTRKGFEKESCLVR*QPADHS Trigger: GGAGTGGTCAGCAGGCTGGCACCTCACAAGGCAGGA...CTCCTTCTCAAAACCCTTTCTGGTTGGAGTTGTTATTCTGTCCCATCTTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGCTTGCTTCCAAAGGCTTTAGGCAGAGACAAAGACAATCTATCTCTCCTGTCAGGTCCCGAAGATaGCAAACAACCCCTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: EWLASKGFRQRQRQSISPVRSRR*QTTPPP Trigger: TGGGGGAGGGGTTGTTTGCCATCTTCGGGACCTGAC...AGGAGAGATAGATTGTCTTTGTCTCTGCCTAAAGCCTTTGGAAGCAAGCCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR GCA 90 bp | TTATGGAGATGGTACTGTTCCCCTCTGCTAGAAAGAAGCCCAGGAGTAGTGAGAGTGCATCCAGGCAGTTaGTTGAGCCAAGTCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: LWRWYCSPLLERSPGVVRVHPGS*LSQVHC Trigger: ACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCAC...TCTCACTACTCCTGGGCTTCTTTCTAGCAGAGGGGAACAGTACCATCTCCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 90 bp | TGTCTGGGGTGGGCGAGAAAACCCTATCCACCAGAAGGAAGTTATTaGGATGGAAGGAGCCTGCAGCCTGAATTTAGCAAAGAAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CLGWARKPYPPEGSY*DGRSLQPEFSKEEK Trigger: CTTCTCTTCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAAATAACTTCCTTCTGGTGGATAGGGTTTTCTCGCCCACCCCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 90 bp | ACATTCAGTTTCTTCCACTCAGCAAAAGTGCATCCAGGCAGTTGCTaGAGCCAAGTCCACTGTTCAGTCAGGTCCCGAAGATGGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: TFSFFHSAKVHPGSC*SQVHCSVRSRRWQT Trigger: TGTTTGCCATCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACTGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 72 bp | GCTTACCACTACTTCCCAGGGCCAGGAGTGCAGGCGTaGACCGCCACGCCTGGCTTAAGTGGTGCTGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: AYHYFPGPGVQA*TATPGLSGAGG Trigger: ACCCCCAGCACCACTTAAGCCAGGCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGAAGTAGTGGTAAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 72 bp | TGCACTCCGACCTGTCCCGGCCTCTACTGCTCTCCCTaGTCACCAGCAAGGCACAGGGTTGTGGGAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: CTPTCPGLYCSP*SPARHRVVGRA Trigger: TGCTCTTCCCACAACCCTGTGCCTTGCTGGTGAGCAGGGAGAGCAGTAGAGGCCGGGACAGGTCGGAGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CCA 72 bp | AGGAGTGCAGGCGTGCACCGCCACGCCTGGCTTAAGTaGTGCTGGGGGTGGATCCCAGAGCTTTGTACATGC | + |
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Preference number: 3 (lower is better) Translates to: RSAGVHRHAWLK*CWGWIPELCTC Trigger: GCATGTACAAAGCTCTGGGATCCACCCCCAGCACCACTTAAGCCAGGCGTGGCGGTGCACGCCTGCACTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 72 bp | AATGAACCCTGCACTCCGACCTGTCCCGGCCTCTACTaGTCTCCCTGCTCACCAGCAAGGCACAGGGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: NEPCTPTCPGLY*SPCSPARHRVV Trigger: CACAACCCTGTGCCTTGCTGGTGAGCAGGGAGAGCAGTAGAGGCCGGGACAGGTCGGAGTGCAGGGTTCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR GCA 72 bp | GACAGGAAGAAAGGGTGTCACCCAGGCAATGAACCCTaGACTCCGACCTGTCCCGGCCTCTACTGCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: DRKKGCHPGNEP*TPTCPGLYCSP Trigger: GGGAGAGCAGTAGAGGCCGGGACAGGTCGGAGTGCAGGGTTCATTGCCTGGGTGACACCCTTTCTTCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR-3UTR CAA 90 bp | AACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACCGGAGTGCATCCAGGCAGTaGCTTGAGCCAAGTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: NTAHDHSRTVRPQLLRDRSASRQ*LEPSPL Trigger: CAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACT...CCGGTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CCA 72 bp | TCACACCTGCACCTAAGCTCGGGCACCGCTAGCCTCTaGGCTCCTGCACCCAAAGTGCTCACAGAAAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SHLHLSSGTASL*APAPKVLTERG Trigger: ACCTCTTTCTGTGAGCACTTTGGGTGCAGGAGCCCAGAGGCTAGCGGTGCCCGAGCTTAGGTGCAGGTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCAACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACTCAACAGGGGAAAGGTaGCTTGAGGGATGGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: GNTAHDHSRTVRPQLLRDSTGER*LEGWET Trigger: AGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTGA...GTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR TCA 72 bp | GTAGTGAGACAGGAAGAAAGGGTGTCACCCAGGCAATaGACCCTGCACTCCGACCTGTCCCGGCCTCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: VVRQEERVSPRQ*TLHSDLSRPLL Trigger: CAGTAGAGGCCGGGACAGGTCGGAGTGCAGGGTTCATTGCCTGGGTGACACCCTTTCTTCCTGTCTCACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | CCACCTGACCTCCAGGCCAGACTGTCCATGTGTGAATaGCTGCACCCACATCTGGAGCATCCTGAAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPDLQARLSMCE*LHPHLEHPESP Trigger: AGGGCTTTCAGGATGCTCCAGATGTGGGTGCAGGCATTCACACATGGACAGTCTGGCCTGGAGGTCAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | AGGGTTTTGAGAAGGAGGGGGAGTTCTAGGTACACATaGCCCAGGGATGCGGAGGCTCCTTCACTCGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RVLRRRGSSRYT*PRDAEAPSLES Trigger: GCTCTCGAGTGAAGGAGCCTCCGCATCCCTGGGGCATGTGTACCTAGAACTCCCCCTCCTTCTCAAAACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | CTGACCTCCAGGCCAGACTGTCCATGTGTGAATGCCTaGACCCACATCTGGAGCATCCTGAAAGCCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LTSRPDCPCVNA*THIWSILKALH Trigger: ATGGAGGGCTTTCAGGATGCTCCAGATGTGGGTGCAGGCATTCACACATGGACAGTCTGGCCTGGAGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | TGCTGGCTTTACAGGCACGAGCTGGGAGAGCTAAGATaGCTAGCAGGTCCTCTCCATTCTGAGGATGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CWLYRHELGELR*LAGPLHSEDGV Trigger: CACGCCATCCTCAGAATGGAGAGGACCTGCTAGGCATCTTAGCTCTCCCAGCTCGTGCCTGTAAAGCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | TCATGGACACACAGCAAAGCAGCTCCTTGCCTTCAATaGCCACCCCACCTCCAGAGCGCCAAACAGCGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SWTHSKAAPCLQ*PPHLQSAKQRR Trigger: TCTTCGCTGTTTGGCGCTCTGGAGGTGGGGTGGGCATTGAAGGCAAGGAGCTGCTTTGCTGTGTGTCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CCA 72 bp | TTGGTGAGGGAGGTGGGCTTCTCCCTGAGGACCTCATaGACACACAGCAAAGCAGCTCCTTGCCTTCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LVREVGFSLRTS*THSKAAPCLQC Trigger: GCATTGAAGGCAAGGAGCTGCTTTGCTGTGTGTCCATGAGGTCCTCAGGGAGAAGCCCACCTCCCTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CCA 72 bp | TTATTGCATTCAACAGGGGAAAGGTTGCTTGAGGGATaGGAGACTCAGCAGGTCCCACCCACCCCAACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLHSTGERLLEG*ETQQVPPTPTG Trigger: CCCGGTTGGGGTGGGTGGGACCTGCTGAGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGGAGGTGGGCTTCTCCCTGAGGACCTCATGGACACACAGCAAAGCAGCTCAACCAGAAAGGGTTTaGAGAAGGAGGGGGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VREVGFSLRTSWTHSKAAQPERV*RRRGSS Trigger: AGAACTCCCCCTCCTTCTCAAAACCCTTTCTGGTTG...AGCTGCTTTGCTGTGTGTCCATGAGGTCCTCAGGGAGAAGCCCACCTCCCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR TCA 72 bp | GAGTCACTTATTGCATTCAACAGGGGAAAGGTTGCTTaGGGGATGGGAGACTCAGCAGGTCCCACCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: ESLIAFNRGKVA*GMGDSAGPTHP Trigger: GGGGTGGGTGGGACCTGCTGAGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGCCAGAAGGAAGTTATTaGGATGGAAGGAGCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LWRGLGGLSYGSDSSLGAPEGSY*DGRSLQ Trigger: CTGCAGGCTCCTTCCATCCAAATAACTTCCTTCTGG...CGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGAGGTGGGCTTCTCCCTGAGGACCTCATGGACACACAGCAAAGCAGCTCCAATATTCAGCTGTCTTaGGAGAGGACTGGGTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: EGGGLLPEDLMDTQQSSSNIQLS*ERTGWI Trigger: AATCCACCCAGTCCTCTCCAAAGACAGCTGAATATT...GGAGCTGCTTTGCTGTGTGTCCATGAGGTCCTCAGGGAGAAGCCCACCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR TCA 72 bp | TCCAGCGCTCAAACCCAAACCTATTTGGAGTGTTCCTaGGACCAGGTCTCACTCAGTAGCCCAGGCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: SSAQTQTYLECS*DQVSLSSPGWT Trigger: AGTCCAGCCTGGGCTACTGAGTGAGACCTGGTCTCAGGAACACTCCAAATAGGTTTGGGTTTGAGCGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | ACCGGAGTCACTTATTGCATTCAACAGGGGAAAGGTTaGTTGAGGGATGGGAGACTCAGCAGGTCCCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TGVTYCIQQGKG*LRDGRLSRSHP Trigger: TGGGTGGGACCTGCTGAGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CCA 72 bp | CACCCCACCTCCAGAGCGCCAAACAGCGAAGATGAGTaGCTTGCTTCCAAAGGCTTTAGGCAGAGACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HPTSRAPNSEDE*LASKGFRQRQR Trigger: TCTTTGTCTCTGCCTAAAGCCTTTGGAAGCAAGCCACTCATCTTCGCTGTTTGGCGCTCTGGAGGTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTGTTAAGGGACCGGAGTCACTTATTGCATTCAACAGGGGAAAGGTTGCTTCAGCAAGGCACAGGGTaGTGGGAAGAGCAGCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: QLLRDRSHLLHSTGERLLQQGTG*WEEQPE Trigger: CTCGGGCTGCTCTTCCCACAACCCTGTGCCTTGCTG...AAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCCTTAACAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR TCA 72 bp | TCTTCCACTCAGCAAAAGTGCATCCAGGCAGTTGCTTaGGCCAAGTCCACTGTTCAGTCAGGTCCCGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SSTQQKCIQAVA*AKSTVQSGPED Trigger: ATCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | AGTTTCTTCCACTCAGCAAAAGTGCATCCAGGCAGTTaGTTGAGCCAAGTCCACTGTTCAGTCAGGTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: SFFHSAKVHPGS*LSQVHCSVRSR Trigger: TCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | AACAGTCGTTGCTCCACAGGGACCTTCTCCATCATCTaGATAGTCACAAAAGTCCGCTTAGGCTTAGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSRCSTGTFSII*IVTKVRLGLGP Trigger: AGGACCTAAGCCTAAGCGGACTTTTGTGACTATGCAGATGATGGAGAAGGTCCCTGTGGAGCAACGACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CCA 72 bp | GCTCCTTCACTCGAGAGCTCTATCCTCCCCAAATTATaGAGATGGTACTGTTCCCCTCTGCTAGAAAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: APSLESSILPKL*RWYCSPLLERS Trigger: GCTTCTTTCTAGCAGAGGGGAACAGTACCATCTCCATAATTTGGGGAGGATAGAGCTCTCGAGTGAAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR TCA 72 bp | TTATTAACAAAACAGATGGAAAACGGAAGCAGTAAGTaGAGATGGCAACACTGCCCACGACCACAGCCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLTKQMENGSSK*RWQHCPRPQPH Trigger: GTGCGGCTGTGGTCGTGGGCAGTGTTGCCATCTTCACTTACTGCTTCCGTTTTCCATCTGTTTTGTTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | TTCCAGGGCTTACCAGGGAGGAAGCATGCCACAAAGTaGCCCATAAAAGTATCAGCAAAATCCAGACATTCA | + |
|
Preference number: 3 (lower is better) Translates to: FQGLPGRKHATK*PIKVSAKSRHS Trigger: TGAATGTCTGGATTTTGCTGATACTTTTATGGGGCACTTTGTGGCATGCTTCCTCCCTGGTAAGCCCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CCA 72 bp | CATCTGTCCCCTGGGAGACACATTAGCAGTGGAAGATaGGACAGAATAACAACTCCAACCAGAAAGGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HLSPGRHISSGR*DRITTPTRKGF Trigger: AAAACCCTTTCTGGTTGGAGTTGTTATTCTGTCCCATCTTCCACTGCTAATGTGTCTCCCAGGGGACAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR GCA 72 bp | ATCCACCAGAAGGAAGTTATTTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAGAAGAGAAGTAACGGC | + |
|
Preference number: 3 (lower is better) Translates to: IHQKEVIWMEGA*SLNLAKKRSNG Trigger: GCCGTTACTTCTCTTCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAAATAACTTCCTTCTGGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTACCACTACTTCCCAGGGCCAGGAGTGCAGGCGTGCACCGCCACGCCTGGGGACTCAAACTCTCCTaGGCCCAGTGGCCGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLPLLPRARSAGVHRHAWGLKLS*AQWPVG Trigger: TCCCACCGGCCACTGGGCCCAGGAGAGTTTGAGTCC...CCAGGCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGAAGTAGTGGTAAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGGGTGGGAGAACGGGAACAGTCGGGAACAGTCGTTGCTCCACAGGGACCCCCGCCCCGTGCTTaGCAGTCTTGGCTGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGGVGEREQSGTVVAPQGPPPRA*QSWLHE Trigger: CTCATGCAGCCAAGACTGTCAAGCACGGGGCGGGGG...TCCCTGTGGAGCAACGACTGTTCCCGACTGTTCCCGTTCTCCCACCCCACCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTACCACTACTTCCCAGGGCCAGGAGTGCAGGCGTGCACCGCCACGCCTGGGTTCAGAGCCCCGGATaGTGTCGTGGATGCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLPLLPRARSAGVHRHAWVQSPG*CRGCPT Trigger: TGTTGGGCATCCACGACATCATCCGGGGCTCTGAAC...CCAGGCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGAAGTAGTGGTAAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR GCA 90 bp | GTGCATCCAGGCAGTTGCTTGAGCCAAGTCCACTGTTCAGTCAGGTCCCGAAGATCCAGCTGCCGCGGGTaGGGTGGCGGGAGGGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHPGSCLSQVHCSVRSRRSSCRG*GGGRDG Trigger: TCCGTCCCTCCCGCCACCGCACCCGCGGCAGCTGGA...TCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR GCA 90 bp | AACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACCGGGACAGTGGAGATCTCTaGCCCCGCCCCGTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTAHDHSRTVRPQLLRDRDSGDL*PRPVLD Trigger: GTCAAGCACGGGGCGGGGGCAGAGATCTCCACTGTC...CCGGTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | AACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACCGGTGGCAGCAACATCACTaGGGGCGGTACCTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTAHDHSRTVRPQLLRDRWQQHH*GRYLAE Trigger: CTCAGCCAGGTACCGCCCCCAGTGATGTTGCTGCCA...CCGGTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGGGTGGGAGAACGGGAACAGTCGGGAACAGTCGTTGCTCCACAGGGAAAATACACCTCCTTCTaGGGGGCCCCCTCCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WGGVGEREQSGTVVAPQGKYTSF*GAPSAL Trigger: GAGTGCGGAGGGGGCCCCCCAGAAGGAGGTGTATTT...TCCCTGTGGAGCAACGACTGTTCCCGACTGTTCCCGTTCTCCCACCCCACCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CAA 72 bp | ACCCACCCCAACCGGGCACCCATCTTGCTGCTTCCTTaGGTGAGGGAGGTGGGCTTCTCCCTGAGGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: THPNRAPILLLP*VREVGFSLRTS Trigger: TGAGGTCCTCAGGGAGAAGCCCACCTCCCTCACCAAAGGAAGCAGCAAGATGGGTGCCCGGTTGGGGTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CAA 72 bp | TCTACTGCTCTCCCTGCTCACCAGCAAGGCACAGGGTaGTGGGAAGAGCAGCCCGAGTCTCACACCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: STALPAHQQGTG*WEEQPESHTCT Trigger: GGTGCAGGTGTGAGACTCGGGCTGCTCTTCCCACAACCCTGTGCCTTGCTGGTGAGCAGGGAGAGCAGTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGGCTCAGGATGGACAGTaGAGATCTCTGCCCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWRGLGGLSYGSDSSLGAAQDGQ*RSLPPP Trigger: GGGCGGGGGCAGAGATCTCCACTGTCCATCCTGAGC...CGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGGAGAGCTCATTGATCGAGTaGGCGACGCCCCACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WRGLGGLSYGSDSSLGAESSLIE*ATPHRN Trigger: GTTCCTGTGGGGCGTCGCTCACTCGATCAATGAGCT...CTCCGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGGGTGGGAGAACGGGAACAGTCGGGAACAGTCGTTGCTCCACAGGGAGGAGGCTGTAGTCCATaGTCTTCAGCTGCACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGGVGEREQSGTVVAPQGGGCSP*SSAALE Trigger: TTCTAGTGCAGCTGAAGATCATGGACTACAGCCTCC...TCCCTGTGGAGCAACGACTGTTCCCGACTGTTCCCGTTCTCCCACCCCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCCCCTAAGCCTCTCAGAACCCGCCACCTCCAACATAAAGCCGCAATCAACTGGGGGCGGTACCTaGCTGAGCTCATTGATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPLSLSEPATSNIKPQSTGGGT*LSSLIE Trigger: CTCGATCAATGAGCTCAGCCAGGTACCGCCCCCAGT...TGATTGCGGCTTTATGTTGGAGGTGGCGGGTTCTGAGAGGCTTAGGGGAGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | CACCAGCAAGGCACAGGGTTGTGGGAAGAGCAGCCCGAGTCTCACACCTGCACCGGCTTTAAAGTCATCTaGCAGCAACATCACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQQGTGLWEEQPESHTCTGFKVI*QQHHWG Trigger: CCCCCAGTGATGTTGCTGCCAGATGACTTTAAAGCC...GGTGCAGGTGTGAGACTCGGGCTGCTCTTCCCACAACCCTGTGCCTTGCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR GCA 90 bp | GGCAACACTGCCCACGACCACAGCCGCACGGTGAGACCCCAGTTGTTAAGGGACGGGGCAGAAGCGTGTTaGCATGACATTTCACTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GNTAHDHSRTVRPQLLRDGAEAC*HDISLC Trigger: ACATAGTGAAATGTCATGGCAACACGCTTCTGCCCC...GTCCCTTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | CACCAGCAAGGCACAGGGTTGTGGGAAGAGCAGCCCGAGTCTCACACCTGCACCAGGTTCCTGAAGACCTaGGGACAATACTCCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQQGTGLWEEQPESHTCTRFLKT*GQYSLN Trigger: GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCT...GGTGCAGGTGTGAGACTCGGGCTGCTCTTCCCACAACCCTGTGCCTTGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGGAGCCTTTTCCTTATCGCTaGCTTCCCGGGACACTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WRGLGGLSYGSDSSLGAEPFPYR*LPGTLE Trigger: CTCTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGG...CTCCGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR TCA 90 bp | CCACCTGACCTCCAGGCCAGACTGTCCATGTGTGAATGCCTGCACCCACATCTGACAGTCTTGGCTGCATaGGCTGCTTTCTTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPDLQARLSMCECLHPHLTVLAA*AAFFLA Trigger: TGCCAAGAAGAAAGCAGCTCATGCAGCCAAGACTGT...CAGATGTGGGTGCAGGCATTCACACATGGACAGTCTGGCCTGGAGGTCAGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CAA 72 bp | GACCGGAGTCACTTATTGCATTCAACAGGGGAAAGGTaGCTTGAGGGATGGGAGACTCAGCAGGTCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: DRSHLLHSTGER*LEGWETQQVPP Trigger: GGGTGGGACCTGCTGAGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCACCCACATCTGGAGCATCCTGAAAGCCCTCCATTCCAGGGCTTACCAACACTAGAGAGCCCTTaGGGTCATACTTCCTATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHPHLEHPESPPFQGLPTLESP*GHTSYA Trigger: TGCATAGGAAGTATGACCTCAAGGGCTCTCTAGTGT...TGGTAAGCCCTGGAATGGAGGGCTTTCAGGATGCTCCAGATGTGGGTGCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGGTGGGCTTCTCCCTGAGGACCTCATGGACACACAGCAAAGCAGCTCCTCCATGATCTTCAGCTaGACTAGAAACTCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: EGGGLLPEDLMDTQQSSSSMIFS*TRNSTS Trigger: AGATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGA...GGAGCTGCTTTGCTGTGTGTCCATGAGGTCCTCAGGGAGAAGCCCACCTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
||
| 3UTR CAA 72 bp | CAGTTTCTTCCACTCAGCAAAAGTGCATCCAGGCAGTaGCTTGAGCCAAGTCCACTGTTCAGTCAGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QFLPLSKSASRQ*LEPSPLFSQVP Trigger: CGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR GCA 90 bp | TCCAGCTCCCCTAAGCCTCTCAGAACCCGCCACCTCCAACATAAAGCCGCAATCCTTGGCTGCATGAGCTaGTTTCTTCTTGGCATCATA | + |
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Preference number: 4 (lower is better) Translates to: SSSPKPLRTRHLQHKAAILGCMS*FLLGII Trigger: TATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAG...GATTGCGGCTTTATGTTGGAGGTGGCGGGTTCTGAGAGGCTTAGGGGAGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR GCA 90 bp | TGCTGGCTTTACAGGCACGAGCTGGGAGAGCTAAGATGCCTAGCAGGTCCTCTCCTTGACAGTCTTGGCTaGATGAGCTGCTTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: CWLYRHELGELRCLAGPLLDSLG*MSCFLL Trigger: AAGAAGAAAGCAGCTCATGCAGCCAAGACTGTCAAG...GAGAGGACCTGCTAGGCATCTTAGCTCTCCCAGCTCGTGCCTGTAAAGCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CCA 90 bp | CTTTGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGTGTACTGGTGGTAGTTaGAGAGGTTGCTGTGCATAT | + |
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Preference number: 4 (lower is better) Translates to: LWRGLGGLSYGSDSSLGACTGGS*RGCCAY Trigger: ATATGCACAGCAACCTCTCCAACTACCACCAGTACA...CGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CCA 90 bp | GAGTGGCTTGCTTCCAAAGGCTTTAGGCAGAGACAAAGACAATCTATCTCTCCTCTCTCCTGGGCCCAGTaGCCGGTGGGAATGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: EWLASKGFRQRQRQSISPLSWAQ*PVGMDV Trigger: TACATCCATTCCCACCGGCCACTGGGCCCAGGAGAG...AGGAGAGATAGATTGTCTTTGTCTCTGCCTAAAGCCTTTGGAAGCAAGCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR GCA 90 bp | AGGAGTAGTGAGACAGGAAGAAAGGGTGTCACCCAGGCAATGAACCCTGCACTCAATCGCTTAGCATACTaGTCAGGATGGACAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSSETGRKGVTQAMNPALNRLAY*SGWTVE Trigger: CTCCACTGTCCATCCTGAGCAGTATGCTAAGCGATT...GAGTGCAGGGTTCATTGCCTGGGTGACACCCTTTCTTCCTGTCTCACTACTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 72 bp | TTCTTCCACTCAGCAAAAGTGCATCCAGGCAGTTGCTaGAGCCAAGTCCACTGTTCAGTCAGGTCCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: FFHSAKVHPGSC*SQVHCSVRSRR Trigger: TCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 72 bp | GTGAGACCCCAGTTGTTAAGGGACCGGAGTCACTTATaGCATTCAACAGGGGAAAGGTTGCTTGAGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VRPQLLRDRSHL*HSTGERLLEGW Trigger: CCATCCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCCTTAACAACTGGGGTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR TCA 90 bp | GCTAGAAAGAAGCCCAGGAGTAGTGAGACAGGAAGAAAGGGTGTCACCCAGGCATGCACAGGAAGACGATaGCTAAACATATTGCGCATC | + |
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Preference number: 4 (lower is better) Translates to: ARKKPRSSETGRKGVTQACTGRR*LNILRI Trigger: GATGCGCAATATGTTTAGTCATCGTCTTCCTGTGCA...TGCCTGGGTGACACCCTTTCTTCCTGTCTCACTACTCCTGGGCTTCTTTCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR GCA 90 bp | TGTCTTTGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGGTAGTTGGAGAGGTTaGTGTGCATATCCGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: CLWRGLGGLSYGSDSSLGGSWRG*CAYPQY Trigger: ATATTGCGGATATGCACAGCAACCTCTCCAACTACC...CCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAGACA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAAGATGGGACAGAATAACAACTCCAACCAGAAAGGGTTTTGAGAAGGAGGCTTCTTCTTGGTTTTaGAGGCGAAGCCGAATCCCG | + |
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Preference number: 4 (lower is better) Translates to: SGRWDRITTPTRKGFEKEASSWF*RRSRIP Trigger: CGGGATTCGGCTTCGCCTCCAAAACCAAGAAGAAGC...CTCCTTCTCAAAACCCTTTCTGGTTGGAGTTGTTATTCTGTCCCATCTTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR TCA 90 bp | AGTGGAAGATGGGACAGAATAACAACTCCAACCAGAAAGGGTTTTGAGAAGGAGGATCTCTCAGGTTCCTaGAGACCTGGGGACAATACT | + |
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Preference number: 4 (lower is better) Translates to: SGRWDRITTPTRKGFEKEDLSGS*RPGDNT Trigger: AGTATTGTCCCCAGGTCTTCAGGAACCTGAGAGATC...CTCCTTCTCAAAACCCTTTCTGGTTGGAGTTGTTATTCTGTCCCATCTTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| 3UTR CAA 72 bp | TGGGCGAGAAAACCCTATCCACCAGAAGGAAGTTATTaGGATGGAAGGAGCCTGCAGCCTGAATTTAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: WARKPYPPEGSY*DGRSLQPEFSK Trigger: TTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAAATAACTTCCTTCTGGTGGATAGGGTTTTCTCGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAAGATGGGACAGAATAACAACTCCAACCAGAAAGGGTTTTGAGAAGGAGCGAAATGCTTCTTCTTaGTTTTGGAGGCGAAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SGRWDRITTPTRKGFEKERNASS*FWRRSR Trigger: TCGGCTTCGCCTCCAAAACCAAGAAGAAGCATTTCG...CTCCTTCTCAAAACCCTTTCTGGTTGGAGTTGTTATTCTGTCCCATCTTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CCA 90 bp | TTATGGAGATGGTACTGTTCCCCTCTGCTAGAAAGAAGCCCAGGAGTAGTGAGAGAGCTGCTTTCTTCTTaGCATCATACTGTGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LWRWYCSPLLERSPGVVRELLSS*HHTVSE Trigger: TTCTGACACAGTATGATGCCAAGAAGAAAGCAGCTC...TCTCACTACTCCTGGGCTTCTTTCTAGCAGAGGGGAACAGTACCATCTCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR TCA 90 bp | AGGATGGCGTGCATTAATATTCAGCTGTCTTTGGAGAGGACTGGGTGGATTGAGTCTCTATGGAAAAAGTaGTTGTTGACCTTGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: RMACINIQLSLERTGWIESLWKK*LLTLIL Trigger: CAAGATCAAGGTCAACAATCACTTTTTCCATAGAGA...CTCAATCCACCCAGTCCTCTCCAAAGACAGCTGAATATTAATGCACGCCATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CCA 90 bp | CGCACTCCGGATAGCATAGACATCGATGAAGGACTCAAACTCTCCTaGGCCCAGTGGCCGGTGGGAATGGATGTAGCCTCCGATACCCTC | + |
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Preference number: 5 (lower is better) Translates to: RTPDSIDIDEGLKLS*AQWPVGMDVASDTL Trigger: GAGGGTATCGGAGGCTACATCCATTCCCACCGGCCACTGGGCCCAGGAGAGTTTGAGTCCTTCATCGATGTCTATGCTATCCGGAGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CCA 90 bp | GATAGCATAGACATCGATGAAGGACTCAAACTCTCCTGGGCCCAGTaGCCGGTGGGAATGGATGTAGCCTCCGATACCCTCAGGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: DSIDIDEGLKLSWAQ*PVGMDVASDTLRGG Trigger: ACCTCCCCTGAGGGTATCGGAGGCTACATCCATTCCCACCGGCCACTGGGCCCAGGAGAGTTTGAGTCCTTCATCGATGTCTATGCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CAA 90 bp | CTTTGGAGAGGACTGGGTGGATTGAGTTATGGCTCTGACTCCTCTCTGGGGGCGTCGCTCGACACTTCCTaGATGACCAGAGTGCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LWRGLGGLSYGSDSSLGASLDTS*MTRVRS Trigger: TGACCGCACTCTGGTCATCAAGGAAGTGTCGAGCGA...CGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CAA 90 bp | TCCAGCTCCCCTAAGCCTCTCAGAACCCGCCACCTCCAACATAAAGCCGCAATCTGCTTCTTCTTGGTTTaGGAGGCGAAGCCGAATCCC | + |
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Preference number: 5 (lower is better) Translates to: SSSPKPLRTRHLQHKAAICFFLV*EAKPNP Trigger: GGGATTCGGCTTCGCCTCCAAAACCAAGAAGAAGCA...GATTGCGGCTTTATGTTGGAGGTGGCGGGTTCTGAGAGGCTTAGGGGAGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS GCA 90 bp | GATCTCTGCCCCCGCCCCGTGCTTGACAGTCTTGGCTGCATGAGCTaGTTTCTTCTTGGCATCATACTGTGTCAGAATGTCAATGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: DLCPRPVLDSLGCMS*FLLGIILCQNVNEA Trigger: GGCCTCATTGACATTCTGACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAGACTGTCAAGCACGGGGCGGGGGCAGAGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CAA 90 bp | CACCAGCAAGGCACAGGGTTGTGGGAAGAGCAGCCCGAGTCTCACACCTGCACCTTGTTGACCTTGATCTaGGAGCTGGCTTTAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: HQQGTGLWEEQPESHTCTLLTLI*ELALKS Trigger: TGACTTTAAAGCCAGCTCCAAGATCAAGGTCAACAA...GGTGCAGGTGTGAGACTCGGGCTGCTCTTCCCACAACCCTGTGCCTTGCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CAA 90 bp | TGCTTACCACTACTTCCCAGGGCCAGGAGTGCAGGCGTGCACCGCCACGCCTGGTACACTTTCTGGTTCTaGTTAAGAAAGTCCATATCC | + |
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Preference number: 5 (lower is better) Translates to: CLPLLPRARSAGVHRHAWYTFWF*LRKSIS Trigger: GGATATGGACTTTCTTAACAAGAACCAGAAAGTGTA...CCAGGCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGAAGTAGTGGTAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CCA 90 bp | GTCATAGGAGATAAGGAAACGGCCATCACTGCCTTCAGTTTCGCTTaGGGGGCTTCGAGTAAGGGACACCAAGTAATCGTGATCATCGAT | + |
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Preference number: 5 (lower is better) Translates to: VIGDKETAITAFSFA*GASSKGHQVIVIID Trigger: ATCGATGATCACGATTACTTGGTGTCCCTTACTCGAAGCCCCCCAAGCGAAACTGAAGGCAGTGATGGCCGTTTCCTTATCTCCTATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS-3UTR CAA 90 bp | GAGTGGCTTGCTTCCAAAGGCTTTAGGCAGAGACAAAGACAATCTATCTCTCCTACGAAATGCTTCTTCTaGGTTTTGGAGGCGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: EWLASKGFRQRQRQSISPTKCFF*VLEAKP Trigger: CGGCTTCGCCTCCAAAACCAAGAAGAAGCATTTCGT...AGGAGAGATAGATTGTCTTTGTCTCTGCCTAAAGCCTTTGGAAGCAAGCCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CCA 72 bp | GACATCGATGAAGGACTCAAACTCTCCTGGGCCCAGTaGCCGGTGGGAATGGATGTAGCCTCCGATACCCTC | + |
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Preference number: 6 (lower is better) Translates to: DIDEGLKLSWAQ*PVGMDVASDTL Trigger: GAGGGTATCGGAGGCTACATCCATTCCCACCGGCCACTGGGCCCAGGAGAGTTTGAGTCCTTCATCGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CCA 72 bp | GATAGCATAGACATCGATGAAGGACTCAAACTCTCCTaGGCCCAGTGGCCGGTGGGAATGGATGTAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: DSIDIDEGLKLS*AQWPVGMDVAS Trigger: GGAGGCTACATCCATTCCCACCGGCCACTGGGCCCAGGAGAGTTTGAGTCCTTCATCGATGTCTATGCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CCA 72 bp | GATAAGGAAACGGCCATCACTGCCTTCAGTTTCGCTTaGGGGGCTTCGAGTAAGGGACACCAAGTAATCGTG | + |
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Preference number: 6 (lower is better) Translates to: DKETAITAFSFA*GASSKGHQVIV Trigger: CACGATTACTTGGTGTCCCTTACTCGAAGCCCCCCAAGCGAAACTGAAGGCAGTGATGGCCGTTTCCTTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS GCA 72 bp | GACATTTCACTATGTACTGGTGGTAGTTGGAGAGGTTaGTGTGCATATCCGCAATATCTTCGCTCGACACTT | + |
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Preference number: 6 (lower is better) Translates to: DISLCTGGSWRG*CAYPQYLRSTL Trigger: AAGTGTCGAGCGAAGATATTGCGGATATGCACAGCAACCTCTCCAACTACCACCAGTACATAGTGAAATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CCA 72 bp | TGTTGCCATGACATTTCACTATGTACTGGTGGTAGTTaGAGAGGTTGCTGTGCATATCCGCAATATCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: CCHDISLCTGGS*RGCCAYPQYLR Trigger: GCGAAGATATTGCGGATATGCACAGCAACCTCTCCAACTACCACCAGTACATAGTGAAATGTCATGGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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| CDS CAA 72 bp | TTCTTTTCTTCTTCACCAATATACACTTTCTGGTTCTaGTTAAGAAAGTCCATATCCTTTAGTGTTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FFSSSPIYTFWF*LRKSISFSVGS Trigger: ACTGCCAACACTAAAGGATATGGACTTTCTTAACAAGAACCAGAAAGTGTATATTGGTGAAGAAGAAAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013970.9 |
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