Pregenerated sensors for PIP4K2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018547Ensembl transcript IDs: ENSMUST00000018691.9
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCACAGGCACAGGAGCCAGACACACCTGCACGGCGGGCCAGGCTTaGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATTTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: VTGTGARHTCTAGQA*SGSSAMSSALTICQ Trigger: CTGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAGGTGTGTCTGGCTCCTGTGCCTGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | GTTCTGCCCACCAGAACCTTACCTGGTTCTCTTCCTGGGAAGGAGTaGGCCCCCACCTGCCTCACCCAATTGGCAGCCCCAGAGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: VLPTRTLPGSLPGKE*APTCLTQLAAPEKP Trigger: GGGCTTCTCTGGGGCTGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGGTAAGGTTCTGGTGGGCAGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR GCA 90 bp | CTGCACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTaGATTGACCATTTGCCAGTTACAGGCGACTGCACCCAGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LHGGPGLEWQLCDEL*IDHLPVTGDCTQRS Trigger: TGACCTCTGGGTGCAGTCGCCTGTAACTGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR GCA 90 bp | AGCCAGACACACCTGCACGGCGGGCCAGGCTTGGAGTGGCAGCTCTaGGATGAGCTCTGCATTGACCATTTGCCAGTTACAGGCGACTGC | + |
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Preference number: 1 (lower is better) Translates to: SQTHLHGGPGLEWQL*DELCIDHLPVTGDC Trigger: GCAGTCGCCTGTAACTGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAGGTGTGTCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | AGGCACAGGAGCCAGACACACCTGCACGGCGGGCCAGGCTTGGAGTaGCAGCTCTGCGATGAGCTCTGCATTGACCATTTGCCAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: RHRSQTHLHGGPGLE*QLCDELCIDHLPVT Trigger: TGTAACTGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAGGTGTGTCTGGCTCCTGTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | CTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTaGTGTCAGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGA | + |
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Preference number: 1 (lower is better) Translates to: LALPCRLGTRPEATA*CQSVHSIPCVSWMR Trigger: TCGCATCCAGCTGACACAAGGGATACTATGAACACTCTGACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR TCA 90 bp | TGGGCAAGGGACAGGCTCTTCGGGTGTCCTCAGCCTCTTTCCTGGTaGCTCAACCTGAAGGACAGCTACGTCTCACTTCCCCTTGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: WARDRLFGCPQPLSW*LNLKDSYVSLPLGD Trigger: GTCACCAAGGGGAAGTGAGACGTAGCTGTCCTTCAGGTTGAGTCACCAGGAAAGAGGCTGAGGACACCCGAAGAGCCTGTCCCTTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR TCA 90 bp | CAAGGCGTCAGGGTCAACCTGCCATGTTCTTCTGTGAGGATGGGGTaGGGGAGCCAAGGTTTCACTTGGCTCCAAGGTGGAAGCATGAGG | + |
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Preference number: 1 (lower is better) Translates to: QGVRVNLPCSSVRMG*GSQGFTWLQGGSMR Trigger: CCTCATGCTTCCACCTTGGAGCCAAGTGAAACCTTGGCTCCCTCACCCCATCCTCACAGAAGAACATGGCAGGTTGACCCTGACGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR GCA 90 bp | GGGGTGGTGATCTCTGGGTTCTTTGAGAACCGGCTGTCTGAGGGCTaGTTCCTGGTCATTCACCGTCTCATGAAGACGAACCTGTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: GVVISGFFENRLSEG*FLVIHRLMKTNLFP Trigger: GGGGAACAGGTTCGTCTTCATGAGACGGTGAATGACCAGGAAGCAGCCCTCAGACAGCCGGTTCTCAAAGAACCCAGAGATCACCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR GCA 90 bp | AGAGAAGCCCAAGACTGCCATCTTGCTTTTCCTGTCTTAGTTCAGTaGAGGGATAGGGAGGACACGGCACAGTGGCCACTCCCCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: REAQDCHLAFPVLVQ*RDREDTAQWPLPSS Trigger: GGAGCTGGGGAGTGGCCACTGTGCCGTGTCCTCCCTATCCCTGCACTGAACTAAGACAGGAAAAGCAAGATGGCAGTCTTGGGCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR GCA 90 bp | CGAATCACATGGTTTCTGAGTCCTTCCCCAAGTCCCCCGTGGTTCTaGCCACCAGAACCTTACCTGGTTCTCTTCCTGGGAAGGAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RITWFLSPSPSPPWF*PPEPYLVLFLGRSG Trigger: CCCACTCCTTCCCAGGAAGAGAACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAGAAACCATGTGATTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | TCTCCTCGAATCACATGGTTTCTGAGTCCTTCCCCAAGTCCCCCGTaGTTCTGCCCACCAGAACCTTACCTGGTTCTCTTCCTGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SPRITWFLSPSPSPP*FCPPEPYLVLFLGR Trigger: CCTTCCCAGGAAGAGAACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAGAAACCATGTGATTCGAGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | GACCAGCCGCTGAGATGTGCTAAGCAGATGGTCCCCCTAAATGTATaGGCTCCCACCTTGAAAAATGGCTGTGGGCAAGGGACAGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: DQPLRCAKQMVPLNV*APTLKNGCGQGTGS Trigger: AGAGCCTGTCCCTTGCCCACAGCCATTTTTCAAGGTGGGAGCCCATACATTTAGGGGGACCATCTGCTTAGCACATCTCAGCGGCTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR TCA 90 bp | ATGATTCTGGATGCCATAAGACAGTCTGGCTGTTCTTCACGGCCCTaGGGAGTCAAGCTAAGGGTCTTGTCTTCCCCTTGGCACCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: MILDAIRQSGCSSRP*GVKLRVLSSPWHLL Trigger: CAGCAGGTGCCAAGGGGAAGACAAGACCCTTAGCTTGACTCCTCAGGGCCGTGAAGAACAGCCAGACTGTCTTATGGCATCCAGAATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | GACACTCATCCTAAGTGGCACACTTCAGAGGACTGGGACCACGGCTaGCAGATTTTGGCTAGCTGTCTAAATGTGTTTCCCTTTGAGACC | + |
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Preference number: 1 (lower is better) Translates to: DTHPKWHTSEDWDHG*QILASCLNVFPFET Trigger: GGTCTCAAAGGGAAACACATTTAGACAGCTAGCCAAAATCTGCCAGCCGTGGTCCCAGTCCTCTGAAGTGTGCCACTTAGGATGAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | TGCAAACACACAACAGGATCAGCCAGGAGCTTCGACTTCCAAGCCTaGGGCAGATCCAGAGTCCTTACTCTTGATTGTGAGGTGAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: CKHTTGSARSFDFQA*GRSRVLTLDCEVRN Trigger: ATTTCTCACCTCACAATCAAGAGTAAGGACTCTGGATCTGCCCCAGGCTTGGAAGTCGAAGCTCCTGGCTGATCCTGTTGTGTGTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CCA 90 bp | TATTTCTGGAAGACCCAACATGATTCTGGATGCCATAAGACAGTCTaGCTGTTCTTCACGGCCCTGAGGAGTCAAGCTAAGGGTCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: YFWKTQHDSGCHKTV*LFFTALRSQAKGLV Trigger: GACAAGACCCTTAGCTTGACTCCTCAGGGCCGTGAAGAACAGCCAGACTGTCTTATGGCATCCAGAATCATGTTGGGTCTTCCAGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR GCA 90 bp | CTATTCTTAAATGTCTATTTCTGGAAGACCCAACATGATTCTGGATaGCATAAGACAGTCTGGCTGTTCTTCACGGCCCTGAGGAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: LFLNVYFWKTQHDSG*HKTVWLFFTALRSQ Trigger: TTGACTCCTCAGGGCCGTGAAGAACAGCCAGACTGTCTTATGGCATCCAGAATCATGTTGGGTCTTCCAGAAATAGACATTTAAGAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR TCA 90 bp | GTGATGACATACAGCATTAGAAAGAGCAATCCTGGAGCAGTGAATTaGAGAAACAAACCCAAAGAAACCCACAAAGTCAACTCCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: VMTYSIRKSNPGAVN*RNKPKETHKVNSSS Trigger: GGAGCTGGAGTTGACTTTGTGGGTTTCTTTGGGTTTGTTTCTTCAATTCACTGCTCCAGGATTGCTCTTTCTAATGCTGTATGTCATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTCCTGGTCCAGCAGTCTaGCTCTGGCAGAAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLALPCRLGTRPEATAWCPGPAV*LWQKAE Trigger: CTCTGCCTTCTGCCAGAGCCAGACTGCTGGACCAGG...ACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCAAGGGAACTGAGAGCCTaGCAGGAAGAGGGAGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PGSLPGKEWAPTCLTQLARELRA*QEEGGP Trigger: GGGCCCTCCCTCTTCCTGTCAGGCTCTCAGTTCCCT...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CAA 90 bp | AGTCACAGGCACAGGAGCCAGACACACCTGCACGGCGGGCCAGGCTaGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SHRHRSQTHLHGGPG*EWQLCDELCIDHLP Trigger: TGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAGGTGTGTCTGGCTCCTGTGCCTGTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTAGAACAAACCGTGGCTaGCTGAGGTGTCTGAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LLALPCRLGTRPEATAWCRTNRG*LRCLSN Trigger: GTTGCTCAGACACCTCAGTCAGCCACGGTTTGTTCT...ACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | CACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATTGCCATGTTCTTCTGTaGGGATGGGGTGAGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: HGGPGLEWQLCDELCIDHCHVLL*GWGEGA Trigger: GGCTCCCTCACCCCATCCTCACAGAAGAACATGGCA...ATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTCTCTTCTCGTCCCTTGTaGTGGCCTGAACTGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SWRCPADWEHGLRPLLGVSSRPL*WPELKG Trigger: TCCCTTCAGTTCAGGCCAGCACAAGGGACGAGAAGA...GACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGCTGAGATGTGCTAAGCAGATGGTCCCCCTAAATGTATGGGCTCCCACCCCGATCCCCGACCCCTaGTCCAGCAGTCTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QPLRCAKQMVPLNVWAPTPIPDP*SSSLAL Trigger: CAGAGCCAGACTGCTGGACCAGGGGTCGGGGATCGG...GGTGGGAGCCCATACATTTAGGGGGACCATCTGCTTAGCACATCTCAGCGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGGAGTCCAGTCTCTCCTCCCTTGAGCACTGCTAGGGGACCTGTTCAGGCCTCCCCAAGTCCCCCGTaGTTCTGCCCACCAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: DRSPVSPPLSTARGPVQASPSPP*FCPPEP Trigger: AGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGA...GGCCTGAACAGGTCCCCTAGCAGTGCTCAAGGGAGGAGAGACTGGACTCCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCAATTCCGGATTCCTCCTaGGGGAGCTGGGAAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PGSLPGKEWAPTCLTQLAIPDSS*GSWEEV Trigger: TACCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAAT...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGGAGTCCAGTCTCTCCTCCCTTGAGCACTGCTAGGGGACCTGTTCAGGCCTCCCTTCTGAGGCCCTaGGCCAGAATCCTGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: DRSPVSPPLSTARGPVQASLLRP*ARILKE Trigger: CTCCTTCAGGATTCTGGCCCAGGGCCTCAGAAGGGA...GGCCTGAACAGGTCCCCTAGCAGTGCTCAAGGGAGGAGAGACTGGACTCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CAA 90 bp | TTCTTCACGGCCCTGAGGAGTCAAGCTAAGGGTCTTGTCTTCCCCTaGGCACCTGCTGCCCAGAGCGTGACTGGTGGGACTCAGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: FFTALRSQAKGLVFP*APAAQSVTGGTQEE Trigger: CTCTTCCTGAGTCCCACCAGTCACGCTCTGGGCAGCAGGTGCCAAGGGGAAGACAAGACCCTTAGCTTGACTCCTCAGGGCCGTGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGATCTGTGAGGATGGGGTaGGGGAGCCAAGGTTTCACT | + |
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Preference number: 2 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRSVRMG*GSQGFT Trigger: AGTGAAACCTTGGCTCCCTCACCCCATCCTCACAGA...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTCCTTCCCCAAGTCCCCCGTGGTTCTGCCCACCAGAACCTTACCTGGTTCGGCTGTCTGAGGGCTaGTTCCTGGTCATTCACCGT | + |
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Preference number: 2 (lower is better) Translates to: LSPSPSPPWFCPPEPYLVRLSEG*FLVIHR Trigger: ACGGTGAATGACCAGGAAGCAGCCCTCAGACAGCCG...AACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCAAAGAGTCCATCTAGGTaGGAACAAACCGTGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: PGSLPGKEWAPTCLTQLAKSPSR*EQTVAD Trigger: GTCAGCCACGGTTTGTTCTCACCTAGATGGACTCTT...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCATCATTCACCGTCTCATaGAGACGAACCTGTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PGSLPGKEWAPTCLTQLASFTVS*RRTCSP Trigger: AGGGGAACAGGTTCGTCTTCATGAGACGGTGAATGA...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTCGGAAAACAGAGAGCTTaGAACAGAAAGCTACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SWRCPADWEHGLRPLLGVGKQRA*NRKLPL Trigger: GAGAGGTAGCTTTCTGTTTCAAGCTCTCTGTTTTCC...GACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGGAGTCCAGTCTCTCCTCCCTTGAGCACTGCTAGGGGACCTGTTCAGGCCTCTCGTCCCTTGTGCTaGCCTGAACTGAAGGGAACT | + |
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Preference number: 2 (lower is better) Translates to: DRSPVSPPLSTARGPVQASRPLC*PELKGT Trigger: AGTTCCCTTCAGTTCAGGCCAGCACAAGGGACGAGA...GGCCTGAACAGGTCCCCTAGCAGTGCTCAAGGGAGGAGAGACTGGACTCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCACAATACTCCAGGAAATAAAAGAGTCCATCTAGGTGAGAACAAACCGTGGCGCAAGCCCCCACTCTaGTCCCCACCCTCCCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: MHNTPGNKRVHLGENKPWRKPPL*SPPSRP Trigger: GGGCCGGGAGGGTGGGGAGCAGAGTGGGGGCTTGCG...CCACGGTTTGTTCTCACCTAGATGGACTCTTTTATTTCCTGGAGTATTGTGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR CAA 90 bp | CCTAAGTGGCACACTTCAGAGGACTGGGACCACGGCTGGCAGATTTaGGCTAGCTGTCTAAATGTGTTTCCCTTTGAGACCCCCTACCCC | + |
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Preference number: 2 (lower is better) Translates to: PKWHTSEDWDHGWQI*ASCLNVFPFETPYP Trigger: GGGGTAGGGGGTCTCAAAGGGAAACACATTTAGACAGCTAGCCAAAATCTGCCAGCCGTGGTCCCAGTCCTCTGAAGTGTGCCACTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCACCTGGAGCAGTGAATTaGAGAAACAAACCCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: PGSLPGKEWAPTCLTQLAPGAVN*RNKPKE Trigger: TTCTTTGGGTTTGTTTCTTCAATTCACTGCTCCAGG...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTGAGGGCTGTCTCGGTGCACTGTCCTTTCTGCCCGAAATACTTGAGTCGGAATCACATGGTTTCTaGGTCCTTCCCCAAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSEGCLGALSFLPEILESESHGF*VLPQVP Trigger: GGGGACTTGGGGAAGGACTCAGAAACCATGTGATTC...CGACTCAAGTATTTCGGGCAGAAAGGACAGTGCACCGAGACAGCCCTCAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | AAAAATCCATCTCATCCTAAATTCCGGATTCCTCCTGAGGGAGCTGGGAAGAGGGGGCCAGGCTTGGAGTaGCAGCTCTGCGATGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: KNPSHPKFRIPPEGAGKRGPGLE*QLCDEL Trigger: GAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCC...CCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAATTTAGGATGAGATGGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTGAGGGCTGTCTCGGTGCACTGTCCTTTCTGCCCGAAATACTTGAGTCGAGAAGGAATGGGGACTaGCTGCCACACAGTAATCGG | + |
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Preference number: 2 (lower is better) Translates to: SSEGCLGALSFLPEILESRRNGD*LPHSNR Trigger: CCGATTACTGTGTGGCAGCCAGTCCCCATTCCTTCT...CGACTCAAGTATTTCGGGCAGAAAGGACAGTGCACCGAGACAGCCCTCAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTTTCTTCCTGGCAACCACTTGCTCTGGTGGCATCAGAATGACTTGTGTAACGGCGGGCCAGGCTTaGAGTGGCAGCTCTGCGATG | + |
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Preference number: 2 (lower is better) Translates to: LFFFLATTCSGGIRMTCVTAGQA*SGSSAM Trigger: CATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGT...TACACAAGTCATTCTGATGCCACCAGAGCAAGTGGTTGCCAGGAAGAAAAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCAACACATCTTAGTTTCTaGGATTTTCCCAAAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PGSLPGKEWAPTCLTQLATHLSF*DFPKGK Trigger: TTTCCCTTTGGGAAAATCCCAGAAACTAAGATGTGT...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR TCA 90 bp | AAAAATCCATCTCATCCTAAATTCCGGATTCCTCCTGAGGGAGCTGGGAAGAGGCTAAAGCTGTCCAGGTaGGAAGTCACAGGCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: KNPSHPKFRIPPEGAGKRLKLSR*EVTGTG Trigger: TCCTGTGCCTGTGACTTCTCACCTGGACAGCTTTAG...CCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAATTTAGGATGAGATGGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTTCAGTCCCCCGTGGTTCTaGCCACCAGAACCTTACCTG | + |
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Preference number: 2 (lower is better) Translates to: SVHSIPCVSWMRDIFSQFSPPWF*PPEPYL Trigger: CAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACT...GAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCTGAGGGCTGTCTCGGTGCACTGTCCTTTCTGCCCGAAATACTTGAGTCGAAACACACGAATGAATaGCAAGGAATCAGAAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSEGCLGALSFLPEILESKHTNE*QGIRKS Trigger: TGACTTTCTGATTCCTTGGCATTCATTCGTGTGTTT...CGACTCAAGTATTTCGGGCAGAAAGGACAGTGCACCGAGACAGCCCTCAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTTCAGGTGTCTGAGCAACTaGTCTTCTCGTCCCTTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SVHSIPCVSWMRDIFSQFRCLSN*SSRPLC Trigger: GCACAAGGGACGAGAAGAGCAGTTGCTCAGACACCT...GAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTTCAATCCTGAAGGAGGCTaGGGGCTGTCACTCTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SVHSIPCVSWMRDIFSQFNPEGG*GLSLFP Trigger: TGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT...GAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTCACCAGAACCTTACCTaGTTCTCTTCCTGGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RVFIVSLVSAGCETYFLSHQNLT*FSSWEG Trigger: TCCTTCCCAGGAAGAGAACCAGGTAAGGTTCTGGTG...ACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTGCAATCCTGGAGCAGTaGATTGAAGAAACAAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: RVFIVSLVSAGCETYFLSAILEQ*IEETNP Trigger: TGGGTTTGTTTCTTCAATTCACTGCTCCAGGATTGC...ACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CAA 90 bp | ATCATCTATTCACCCACGACAGCTTCACAAACCAGCTTCACATCTTaGGGGTTATCTACAAAAATCCATCTCATCCTAAATTCCGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: IIYSPTTASQTSFTS*GLSTKIHLILNSGF Trigger: GAATCCGGAATTTAGGATGAGATGGATTTTTGTAGATAACCCCAAAGATGTGAAGCTGGTTTGTGAAGCTGTCGTGGGTGAATAGATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCACACGGCGGGCCAGGCTaGGAGTGGCAGCTCTGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: PGSLPGKEWAPTCLTQLAHGGPG*EWQLCD Trigger: ATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | CCTTCTGAGGCCCTGGGCCAGAATCCTGAAGGAGGCTaGGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSEALGQNPEGG*GLSLFPRRTGG Trigger: GCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATTCTGGCCCAGGGCCTCAGAAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTaGCTCACCCAATTGGCAGCCCCAGAGAAGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGSLPGKEWAPT*LTQLAAPEKPK Trigger: CTTGGGCTTCTCTGGGGCTGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | ACAGGAGCCAGACACACCTGCACGGCGGGCCAGGCTTaGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACC | + |
|
Preference number: 3 (lower is better) Translates to: TGARHTCTAGQA*SGSSAMSSALT Trigger: GGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAGGTGTGTCTGGCTCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | CTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTaGCAGCCCCAGAGAAGCCCAAGACTGCCATCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LGRSGPPPASPN*QPQRSPRLPSC Trigger: GCAAGATGGCAGTCTTGGGCTTCTCTGGGGCTGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | CAAGTCCCCCGTGGTTCTGCCCACCAGAACCTTACCTaGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: QVPRGSAHQNLT*FSSWEGVGPHL Trigger: CAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | AGCCAGACACACCTGCACGGCGGGCCAGGCTTGGAGTaGCAGCTCTGCGATGAGCTCTGCATTGACCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQTHLHGGPGLE*QLCDELCIDHL Trigger: CAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAGGTGTGTCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | ACCAGAACCTTACCTGGTTCTCTTCCTGGGAAGGAGTaGGCCCCCACCTGCCTCACCCAATTGGCAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TRTLPGSLPGKE*APTCLTQLAAP Trigger: TGGGGCTGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGGTAAGGTTCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | GGGGAAGTCTCGACAGGAGTCCAGTCTCTCCTCCCTTaGGCACTGCTAGGGGACCTGTTCAGGCCTAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GEVSTGVQSLLP*ALLGDLFRPKA Trigger: GGCTTTAGGCCTGAACAGGTCCCCTAGCAGTGCTCAAGGGAGGAGAGACTGGACTCCTGTCGAGACTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | GGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTaGATTGACCATTTGCCAGTTACAGGCGACTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GPGLEWQLCDEL*IDHLPVTGDCT Trigger: GGTGCAGTCGCCTGTAACTGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | CACCTGCACGGCGGGCCAGGCTTGGAGTGGCAGCTCTaGGATGAGCTCTGCATTGACCATTTGCCAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: HLHGGPGLEWQL*DELCIDHLPVT Trigger: TGTAACTGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTGCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | GGGGTCACCTCCTCAGGTGACTCAGGCAACCTCAGGTaGAGCACCTTGCTGGCTAAAGCTGTCCAGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GVTSSGDSGNLR*STLLAKAVQVR Trigger: TCTCACCTGGACAGCTTTAGCCAGCAAGGTGCTCCACCTGAGGTTGCCTGAGTCACCTGAGGAGGTGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTCCTTCCCCAAGTCCCCCGTGGTTCTGCCCACCAGAACCTTACCTGGTTTGCTCTTCTCGTCCCTaGTGCTGGCCTGAACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSPSPSPPWFCPPEPYLVCSSRP*CWPELK Trigger: CTTCAGTTCAGGCCAGCACAAGGGACGAGAAGAGCA...AACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGAGTCCAGTCTCTCCTCCCTTGAGCACTGCTAGGGGACCTGTTCAGGCCGAGCCAAGGTTTCACTaGGCTCCAAGGTGGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: DRSPVSPPLSTARGPVQAEPRFH*APRWKH Trigger: ATGCTTCCACCTTGGAGCCAAGTGAAACCTTGGCTC...GGCCTGAACAGGTCCCCTAGCAGTGCTCAAGGGAGGAGAGACTGGACTCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | TCAGGTGGAGCACCTTGCTGGCTAAAGCTGTCCAGGTaGGAAGTCACAGGCACAGGAGCCAGACACACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGGAPCWLKLSR*EVTGTGARHTC Trigger: GCAGGTGTGTCTGGCTCCTGTGCCTGTGACTTCTCACCTGGACAGCTTTAGCCAGCAAGGTGCTCCACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | CAAACAAACAGGCTTTCCTGGGGTCACCTCCTCAGGTaGCTCAGGCAACCTCAGGTGGAGCACCTTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QTNRLSWGHLLR*LRQPQVEHLAG Trigger: GCCAGCAAGGTGCTCCACCTGAGGTTGCCTGAGTCACCTGAGGAGGTGACCCCAGGAAAGCCTGTTTGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | CCTGAGCTAGATAAGGATTTAGCACTGCAGCGGAACTaGACCGCACTCCTGGCGCTGCCCTGCAGACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PELDKDLALQRN*TALLALPCRLG Trigger: TCCCAGTCTGCAGGGCAGCGCCAGGAGTGCGGTTCAGTTCCGCTGCAGTGCTAAATCCTTATCTAGCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | CATCAGAATGACTTGTGTAGCTCCCTTCTGAGGCCCTaGGCCAGAATCCTGAAGGAGGCTGCGGGCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HQNDLCSSLLRP*ARILKEAAGCH Trigger: GTGACAGCCCGCAGCCTCCTTCAGGATTCTGGCCCAGGGCCTCAGAAGGGAGCTACACAAGTCATTCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTAGGAAAACAGAGAGCTaGAAACAGAAAGCTACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLALPCRLGTRPEATAWCRKTES*KQKATS Trigger: AGAGGTAGCTTTCTGTTTCAAGCTCTCTGTTTTCCT...ACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | TCCAAGGCGTCAGGGTCAACCTGCCATGTTCTTCTGTaGGGATGGGGTGAGGGAGCCAAGGTTTCACTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SKASGSTCHVLL*GWGEGAKVSLG Trigger: GCCAAGTGAAACCTTGGCTCCCTCACCCCATCCTCACAGAAGAACATGGCAGGTTGACCCTGACGCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | TGGTTTCTGAGTCCTTCCCCAAGTCCCCCGTGGTTCTaGCCACCAGAACCTTACCTGGTTCTCTTCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WFLSPSPSPPWF*PPEPYLVLFLG Trigger: TCCCAGGAAGAGAACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAGAAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | CCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTaGTGTCAGAGTGTTCATAGTATCCCTTGTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PCRLGTRPEATA*CQSVHSIPCVS Trigger: GCTGACACAAGGGATACTATGAACACTCTGACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | TACGTCTCACTTCCCCTTGGTGACACTCATCCTAAGTaGCACACTTCAGAGGACTGGGACCACGGCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YVSLPLGDTHPK*HTSEDWDHGWQ Trigger: CTGCCAGCCGTGGTCCCAGTCCTCTGAAGTGTGCCACTTAGGATGAGTGTCACCAAGGGGAAGTGAGACGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | GGTCCCCCTAAATGTATGGGCTCCCACCTTGAAAAATaGCTGTGGGCAAGGGACAGGCTCTTCGGGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GPPKCMGSHLEK*LWARDRLFGCP Trigger: AGGACACCCGAAGAGCCTGTCCCTTGCCCACAGCCATTTTTCAAGGTGGGAGCCCATACATTTAGGGGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTGAGGGCTGTCTCGGTGCACTGTCCTTTCTGCCCGAAATACTTGAGTCGGCCGGCGAGACCGTTTaGTTTTTCTTCCTGGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: SSEGCLGALSFLPEILESAGETV*FFFLAT Trigger: GGTTGCCAGGAAGAAAAACAAAACGGTCTCGCCGGC...CGACTCAAGTATTTCGGGCAGAAAGGACAGTGCACCGAGACAGCCCTCAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | AGGGTCAACCTGCCATGTTCTTCTGTGAGGATGGGGTaGGGGAGCCAAGGTTTCACTTGGCTCCAAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RVNLPCSSVRMG*GSQGFTWLQGG Trigger: TCCACCTTGGAGCCAAGTGAAACCTTGGCTCCCTCACCCCATCCTCACAGAAGAACATGGCAGGTTGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | CTGAGGTGTCTGAGCAACTGCTCTTCTCGTCCCTTGTaGTGGCCTGAACTGAAGGGAACTGAGAGCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LRCLSNCSSRPL*WPELKGTESLT Trigger: TGTCAGGCTCTCAGTTCCCTTCAGTTCAGGCCAGCACAAGGGACGAGAAGAGCAGTTGCTCAGACACCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | AGGTGTCTGAGCAACTGCTCTTCTCGTCCCTTGTGCTaGCCTGAACTGAAGGGAACTGAGAGCCTGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RCLSNCSSRPLC*PELKGTESLTG Trigger: TCCTGTCAGGCTCTCAGTTCCCTTCAGTTCAGGCCAGCACAAGGGACGAGAAGAGCAGTTGCTCAGACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | CCTAAATGTATGGGCTCCCACCTTGAAAAATGGCTGTaGGCAAGGGACAGGCTCTTCGGGTGTCCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PKCMGSHLEKWL*ARDRLFGCPQP Trigger: AGGCTGAGGACACCCGAAGAGCCTGTCCCTTGCCCACAGCCATTTTTCAAGGTGGGAGCCCATACATTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | GATGCCATAAGACAGTCTGGCTGTTCTTCACGGCCCTaGGGAGTCAAGCTAAGGGTCTTGTCTTCCCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DAIRQSGCSSRP*GVKLRVLSSPW Trigger: CCAAGGGGAAGACAAGACCCTTAGCTTGACTCCTCAGGGCCGTGAAGAACAGCCAGACTGTCTTATGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | CAAGACTGCCATCTTGCTTTTCCTGTCTTAGTTCAGTaGAGGGATAGGGAGGACACGGCACAGTGGCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: QDCHLAFPVLVQ*RDREDTAQWPL Trigger: GAGTGGCCACTGTGCCGTGTCCTCCCTATCCCTGCACTGAACTAAGACAGGAAAAGCAAGATGGCAGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | CCTCACCCAATTGGCAGCCCCAGAGAAGCCCAAGACTaGCATCTTGCTTTTCCTGTCTTAGTTCAGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PHPIGSPREAQD*HLAFPVLVQCR Trigger: CCTGCACTGAACTAAGACAGGAAAAGCAAGATGGCAGTCTTGGGCTTCTCTGGGGCTGCCAATTGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | ATCACATGGTTTCTGAGTCCTTCCCCAAGTCCCCCGTaGTTCTGCCCACCAGAACCTTACCTGGTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ITWFLSPSPSPP*FCPPEPYLVLF Trigger: GAAGAGAACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAGAAACCATGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | GGTGACACTCATCCTAAGTGGCACACTTCAGAGGACTaGGACCACGGCTGGCAGATTTTGGCTAGCTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GDTHPKWHTSED*DHGWQILASCL Trigger: TAGACAGCTAGCCAAAATCTGCCAGCCGTGGTCCCAGTCCTCTGAAGTGTGCCACTTAGGATGAGTGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | ACAACAGGATCAGCCAGGAGCTTCGACTTCCAAGCCTaGGGCAGATCCAGAGTCCTTACTCTTGATTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TTGSARSFDFQA*GRSRVLTLDCE Trigger: CTCACAATCAAGAGTAAGGACTCTGGATCTGCCCCAGGCTTGGAAGTCGAAGCTCCTGGCTGATCCTGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | CTGAGATGTGCTAAGCAGATGGTCCCCCTAAATGTATaGGCTCCCACCTTGAAAAATGGCTGTGGGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRCAKQMVPLNV*APTLKNGCGQG Trigger: CCCTTGCCCACAGCCATTTTTCAAGGTGGGAGCCCATACATTTAGGGGGACCATCTGCTTAGCACATCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTACCTGCCTCACCCAATaGGCAGCCCCAGAGAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RVFIVSLVSAGCETYFLSTCLTQ*AAPEKP Trigger: GGGCTTCTCTGGGGCTGCCAATTGGGTGAGGCAGGT...ACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | GGCGAGACCGTTTTGTTTTTCTTCCTGGCAACCACTTaGTCTGGTGGCATCAGAATGACTTGTGTAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GETVLFFFLATT*SGGIRMTCVAP Trigger: GGGAGCTACACAAGTCATTCTGATGCCACCAGAGCAAGTGGTTGCCAGGAAGAAAAACAAAACGGTCTCGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | AAGACCCAACATGATTCTGGATGCCATAAGACAGTCTaGCTGTTCTTCACGGCCCTGAGGAGTCAAGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KTQHDSGCHKTV*LFFTALRSQAK Trigger: CTTAGCTTGACTCCTCAGGGCCGTGAAGAACAGCCAGACTGTCTTATGGCATCCAGAATCATGTTGGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | GGAAATAAAAGAGTCCATCTAGGTGAGAACAAACCGTaGCTGACTGAGGTGTCTGAGCAACTGCTCTTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: GNKRVHLGENKP*LTEVSEQLLFS Trigger: CGAGAAGAGCAGTTGCTCAGACACCTCAGTCAGCCACGGTTTGTTCTCACCTAGATGGACTCTTTTATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | GGGTGCATACGGGCCCGGTTTACACATCTTAGTTTCTaGGATTTTCCCAAAGGGAAACAGTCATCGAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GCIRARFTHLSF*DFPKGKQSSKH Trigger: GTGTTTCGATGACTGTTTCCCTTTGGGAAAATCCCAGAAACTAAGATGTGTAAACCGGGCCCGTATGCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | AATGTCTATTTCTGGAAGACCCAACATGATTCTGGATaGCATAAGACAGTCTGGCTGTTCTTCACGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NVYFWKTQHDSG*HKTVWLFFTAL Trigger: CAGGGCCGTGAAGAACAGCCAGACTGTCTTATGGCATCCAGAATCATGTTGGGTCTTCCAGAAATAGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATCCATCTCATCCTAAATTCCGGATTCCTCCTGAGGGAGCTGGGAAGAGGTCCTGGAGCAGTGAATaGAAGAAACAAACCCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KNPSHPKFRIPPEGAGKRSWSSE*KKQTQR Trigger: TCTTTGGGTTTGTTTCTTCAATTCACTGCTCCAGGA...CCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAATTTAGGATGAGATGGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR GCA 72 bp | GTCAGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATaGGAGACATATTTTCTCAGTTCCACAGTTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VRVFIVSLVSAG*ETYFLSSTVST Trigger: TGTGGAAACTGTGGAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CCA 72 bp | TGGTGTCAGAGTGTTCATAGTATCCCTTGTGTCAGCTaGATGCGAGACATATTTTCTCAGTTCCACAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WCQSVHSIPCVS*MRDIFSQFHSF Trigger: GAAACTGTGGAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCTGACACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR TCA 72 bp | TACAGCATTAGAAAGAGCAATCCTGGAGCAGTGAATTaGAGAAACAAACCCAAAGAAACCCACAAAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YSIRKSNPGAVN*RNKPKETHKVN Trigger: GTTGACTTTGTGGGTTTCTTTGGGTTTGTTTCTTCAATTCACTGCTCCAGGATTGCTCTTTCTAATGCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | CACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATTGGTTTTGCTGGCGCTaGGCGGCGCCACCGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: HGGPGLEWQLCDELCIDHWFCWR*AAPPPP Trigger: CGGTGGCGGTGGCGCCGCTCAGCGCCAGCAAAACCA...ATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTCGGCTGTCTGGAGGCGTaGCATAGGAGCAGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWRCPADWEHGLRPLLGVGCLEA*HRSRAG Trigger: GCCTGCTCTGCTCCTATGGCACGCCTCCAGACAGCC...GACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | CACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATCCGCCACCGCCGTGGTaGTGGTGCAGTTGGACGACA | + |
|
Preference number: 4 (lower is better) Translates to: HGGPGLEWQLCDELCIDHPPPPW*WCSWTT Trigger: TGTCGTCCAACTGCACCAGCACCACGGCGGTGGCGG...ATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGAGCCCGGTCCACGTCGTaGATGCCCACCAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRARSTS*MPTRRL Trigger: CAGTCTCCTGGTGGGCATCCACGACGTGGACCGGGC...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGAGCACGTGCAAACAGCCCGTCCCCTTCTTCCTTCAGGTCACAGGCTGCCCACATCAGGACGCTaGGAATCGGCTCGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCEHVQTARPLLPSGHRLPTSGR*ESARWP Trigger: GGGCCAGCGAGCCGATTCTCAGCGTCCTGATGTGGG...CAGCCTGTGACCTGAAGGAAGAAGGGGACGGGCTGTTTGCACGTGCTCACAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTGGTCCACGTCGTGGATaGCCACCAGGAGACTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLALPCRLGTRPEATAWCGPRRG*PPGDCN Trigger: ATTACAGTCTCCTGGTGGGCATCCACGACGTGGACC...ACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | CACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATCGGTCAGGCGGTACATaGCCAGGAACTGTGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGGPGLEWQLCDELCIDHRSGGT*PGTVAR Trigger: TCTTGCCACAGTTCCTGGGCATGTACCGCCTGACCG...ATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGAGTTGCCAGGGCTGTCTaGAGGCGTGCCATAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRVARAV*RRAIGA Trigger: TGCTCCTATGGCACGCCTCCAGACAGCCCTGGCAAC...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CAA 72 bp | GCCCTGAGGAGTCAAGCTAAGGGTCTTGTCTTCCCCTaGGCACCTGCTGCCCAGAGCGTGACTGGTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ALRSQAKGLVFP*APAAQSVTGGT Trigger: AGTCCCACCAGTCACGCTCTGGGCAGCAGGTGCCAAGGGGAAGACAAGACCCTTAGCTTGACTCCTCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGATGCCGAACCTCTCCCTaGGGTTTCGGAACACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRCRTSP*GFGTPW Trigger: CCATGGTGTTCCGAAACCTCAGGGAGAGGTTCGGCA...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGTTCTCTTCCTGGGAAGGAGTGGGCCCCCACCTGCCTCACCCAATTGGCACTCGTTGAAGCGTTTTaGGTACTGCTCCGGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGSLPGKEWAPTCLTQLALVEAF*VLLRVH Trigger: GTGAACCCGGAGCAGTACTCAAAACGCTTCAACGAG...TGCCAATTGGGTGAGGCAGGTGGGGGCCCACTCCTTCCCAGGAAGAGAACCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGACCCACGTGCAGCTTCTaGCCTTCGTTGAGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRPTCSF*PSLRKS Trigger: TGACTTCCTCAACGAAGGGCAGAAGCTGCACGTGGG...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGTCCTTCCCCAAGTCCCCCGTGGTTCTGCCCACCAGAACCTTACCTGGTTCATCCGGCATTAGCATaGCAGGAACAGGGACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSPSPPWFCPPEPYLVHPALA*QEQGHC Trigger: GCAATGTCCCTGTTCCTGTCATGCTAATGCCGGATG...AACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGAGCACGTGCAAACAGCCCGTCCCCTTCTTCCTTCAGGTCACAGGCTGGGAGACTGTAATCCATaGTCTTCAGCTGGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCEHVQTARPLLPSGHRLGDCNP*SSAGPG Trigger: TCCTGGCCCAGCTGAAGATCATGGATTACAGTCTCC...CAGCCTGTGACCTGAAGGAAGAAGGGGACGGGCTGTTTGCACGTGCTCACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCCTTCCCCAAGTCCCCCGTGGTTCTGCCCACCAGAACCTTACCTGGTTTCCATGATCTTCAGCTaGGCCAGGAACTCAACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSPSPPWFCPPEPYLVSMIFS*ARNSTS Trigger: GGACGTTGAGTTCCTGGCCCAGCTGAAGATCATGGA...AACCAGGTAAGGTTCTGGTGGGCAGAACCACGGGGGACTTGGGGAAGGACTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CAA 72 bp | CAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATaGACCATTTGCCAGTTACAGGCGACTGCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAWSGSSAMSSA*TICQLQATAPR Trigger: TCTGGGTGCAGTCGCCTGTAACTGGCAAATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CAA 72 bp | GTTTACCTCCTCCAAGGGCAGGCCGGCGAGACCGTTTaGTTTTTCTTCCTGGCAACCACTTGCTCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYLLQGQAGETV*FFFLATTCSGG Trigger: GCCACCAGAGCAAGTGGTTGCCAGGAAGAAAAACAAAACGGTCTCGCCGGCCTGCCCTTGGAGGAGGTAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGAAAGAGGGTATTGCCGTaGCATTCCACTATGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRKRVLP*HSTMNW Trigger: CCAGTTCATAGTGGAATGTCACGGCAATACCCTCTT...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGACCAGGAAGTTCTTTTTaGTCTCTTCTCCCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRPGSSF*SLLPRA Trigger: TGCACGTGGGAGAAGAGAGCAAAAAGAACTTCCTGG...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGCACCTTGCTGGCTAAAGCTGTCCAGGTGAGAAGTCACAGGCACAGGAGCCGTTTTGGCGGCGTGTaGAGCTTTCTTCTTAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSTLLAKAVQVRSHRHRSRFGGV*SFLLSV Trigger: GACGCTAAGAAGAAAGCTGCACACGCCGCCAAAACG...GCTCCTGTGCCTGTGACTTCTCACCTGGACAGCTTTAGCCAGCAAGGTGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGAGCACGTGCAAACAGCCCGTCCCCTTCTTCCTTCAGGTCACAGGCTGAAGCGTTTTGAGTACTaGTCCGGGTTCACAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCEHVQTARPLLPSGHRLKRFEY*SGFTVE Trigger: CTCCACTGTGAACCCGGAGCAGTACTCAAAACGCTT...CAGCCTGTGACCTGAAGGAAGAAGGGGACGGGCTGTTTGCACGTGCTCACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCATCTCATCCTAAATTCCGGATTCCTCCTGAGGGAGCTGGGAAGAGGGGAAGCTCAGGAGGTTaGCAGGGCTGTCTGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KNPSHPKFRIPPEGAGKRGSSGG*QGCLEA Trigger: CGCCTCCAGACAGCCCTGGCAACCTCCTGAGCTTCC...CCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAATTTAGGATGAGATGGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CAA 72 bp | AAGCAGATGGTCCCCCTAAATGTATGGGCTCCCACCTaGAAAAATGGCTGTGGGCAAGGGACAGGCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KQMVPLNVWAPT*KNGCGQGTGSS Trigger: CGAAGAGCCTGTCCCTTGCCCACAGCCATTTTTCAAGGTGGGAGCCCATACATTTAGGGGGACCATCTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTTCCCACCGCCACCGCCGTaGTGCTGGTGCAGTTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SVHSIPCVSWMRDIFSQFPPPPP*CWCSWT Trigger: CGTCCAACTGCACCAGCACCACGGCGGTGGCGGTGG...GAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCACCTTGCTGGCTAAAGCTGTCCAGGTGAGAAGTCACAGGCACAGGAGCTTTCATGGCTTTTCATaGCATAGACGTCCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSTLLAKAVQVRSHRHRSFHGFS*HRRPQR Trigger: CCTCTGTGGACGTCTATGCCATGAAAAGCCATGAAA...GCTCCTGTGCCTGTGACTTCTCACCTGGACAGCTTTAGCCAGCAAGGTGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGAGCACGTGCAAACAGCCCGTCCCCTTCTTCCTTCAGGTCACAGGCTGCGTGACATTCCACTATaGACTGGTGGTATTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCEHVQTARPLLPSGHRLRDIPL*TGGISL Trigger: TAAAGAAATACCACCAGTTCATAGTGGAATGTCACG...CAGCCTGTGACCTGAAGGAAGAAGGGGACGGGCTGTTTGCACGTGCTCACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | ATGCACAATACTCCAGGAAATAAAAGAGTCCATCTAGGTGAGAACAAACCGTGGACCTCCATCTCCTCCTaGTCTGCCCGGTCCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MHNTPGNKRVHLGENKPWTSISS*SARSTS Trigger: CGACGTGGACCGGGCAGAGCAGGAGGAGATGGAGGT...CCACGGTTTGTTCTCACCTAGATGGACTCTTTTATTTCCTGGAGTATTGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CAA 72 bp | CGGCGAGACCGTTTTGTTTTTCTTCCTGGCAACCACTaGCTCTGGTGGCATCAGAATGACTTGTGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRDRFVFLPGNH*LWWHQNDLCSS Trigger: GGAGCTACACAAGTCATTCTGATGCCACCAGAGCAAGTGGTTGCCAGGAAGAAAAACAAAACGGTCTCGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTGTTCTTCACGGCCCTGAGGAGTCAAGCTAAGGGTCTTGTCTTCCCCTTGGGAGGTTTTCCTTATTaGAGAGATGATTGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WLFFTALRSQAKGLVFPLGGFPY*RDDCPP Trigger: AGGTGGACAATCATCTCTTCAATAAGGAAAACCTCC...CAAGGGGAAGACAAGACCCTTAGCTTGACTCCTCAGGGCCGTGAAGAACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTTCCATCTCCTCCTGCTCTaGCCGGTCCACGTCGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVHSIPCVSWMRDIFSQFHLLLL*PVHVVD Trigger: ATCCACGACGTGGACCGGGCAGAGCAGGAGGAGATG...GAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCATCTCATCCTAAATTCCGGATTCCTCCTGAGGGAGCTGGGAAGAGGGGAGATCTCAGCCCCTaGCCCATGTTTCACCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNPSHPKFRIPPEGAGKRGDLSP*PMFHRF Trigger: AAAACGGTGAAACATGGGGCAGGGGCTGAGATCTCC...CCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAATTTAGGATGAGATGGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | GACAGGAGTCCAGTCTCTCCTCCCTTGAGCACTGCTAGGGGACCTGTTCAGGCCATTATCTTTGAAAGTTaGCAAGTCCTTAGCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRSPVSPPLSTARGPVQAIIFES*QVLSLF Trigger: GAAAAGGCTAAGGACTTGCCAACTTTCAAAGATAAT...GGCCTGAACAGGTCCCCTAGCAGTGCTCAAGGGAGGAGAGACTGGACTCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCATCTCATCCTAAATTCCGGATTCCTCCTGAGGGAGCTGGGAAGAGGCATGTTTCACCGTTTTaGCGGCGTGTGCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNPSHPKFRIPPEGAGKRHVSPF*RRVQLS Trigger: AGAAAGCTGCACACGCCGCCAAAACGGTGAAACATG...CCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAATTTAGGATGAGATGGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTTCGTGCCACACCTGCCCTaGCTGTCACTGTTGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVHSIPCVSWMRDIFSQFVPHLP*LSLLIG Trigger: ACCTATCAACAGTGACAGCCAGGGCAGGTGTGGCAC...GAACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTTCTTCCTGGCAACCACTTGCTCTGGTGGCATCAGAATGACTTGTGTAGGCCACATCCTCACTTaGCACAGTCTTGATGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFFFLATTCSGGIRMTCVGHILT*HSLDDE Trigger: TTCGTCATCAAGACTGTGTCAAGTGAGGATGTGGCC...TACACAAGTCATTCTGATGCCACCAGAGCAAGTGGTTGCCAGGAAGAAAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTCTTCTCTGGCAACAGTaGAACCCTTCAGGTCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RVFIVSLVSAGCETYFLSLLWQQ*NPSGRI Trigger: AATACGACCTGAAGGGTTCCACTGTTGCCAGAGAAG...ACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| 3UTR CAA 72 bp | TCACCCACGACAGCTTCACAAACCAGCTTCACATCTTaGGGGTTATCTACAAAAATCCATCTCATCCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPTTASQTSFTS*GLSTKIHLILN Trigger: ATTTAGGATGAGATGGATTTTTGTAGATAACCCCAAAGATGTGAAGCTGGTTTGTGAAGCTGTCGTGGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTTCCACTATGAACTGGTaGTATTTCTTTAGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVFIVSLVSAGCETYFLSSTMNW*YFFRML Trigger: CAACATCCTAAAGAAATACCACCAGTTCATAGTGGA...ACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS GCA 90 bp | GGTCGAACTCTCCTGGGCCGAAGAACCGGGGGAAGCTCAGGAGGTTaGCAGGGCTGTCTGGAGGCGTGCCATAGGAGCAGAGCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRTLLGRRTGGSSGG*QGCLEACHRSRAGC Trigger: GCAGCCTGCTCTGCTCCTATGGCACGCCTCCAGACAGCCCTGGCAACCTCCTGAGCTTCCCCCGGTTCTTCGGCCCAGGAGAGTTCGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGCGCTGCCCTGCAGACTGGGAACACGGCCTGAGGCCACTGCTTGGTGTTTCTTGGTCTTGGTTTaGCTGGCGCTGAGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLALPCRLGTRPEATAWCFLVLV*LALSGA Trigger: GGCGCCGCTCAGCGCCAGCAAAACCAAGACCAAGAA...ACACCAAGCAGTGGCCTCAGGCCGTGTTCCCAGTCTGCAGGGCAGCGCCAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS GCA 90 bp | TTCCTCCTCCTCCGCTCGCTCTTCCACCTCCATCTCCTCCTGCTCTaGCCGGTCCACGTCGTGGATGCCCACCAGGAGACTGTAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLLLRSLFHLHLLLL*PVHVVDAHQETVIH Trigger: ATGGATTACAGTCTCCTGGTGGGCATCCACGACGTGGACCGGGCAGAGCAGGAGGAGATGGAGGTGGAAGAGCGAGCGGAGGAGGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CAA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGACCCTGGCTGTCACTGTaGATAGGTGCACTGCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRPWLSL*IGALRV Trigger: GACACGCAGTGCACCTATCAACAGTGACAGCCAGGG...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CAA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGACCATGTTTCACCGTTTaGGCGGCGTGTGCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRPCFTV*AACAAF Trigger: GAAAGCTGCACACGCCGCCAAAACGGTGAAACATGG...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CAA 90 bp | CACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATACAGGAACAGGGACATaGCTCAGCTCATTGATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGGPGLEWQLCDELCIDHTGTGT*LSSLIV Trigger: CACGATCAATGAGCTGAGCAATGTCCCTGTTCCTGT...ATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CAA 90 bp | GACAGGAGTCCAGTCTCTCCTCCCTTGAGCACTGCTAGGGGACCTGTTCAGGCCCCCTTCAGGTCGTATTaGCGATGCACAGTAAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: DRSPVSPPLSTARGPVQAPFRSY*RCTVSR Trigger: TCGGCTTACTGTGCATCGCAAATACGACCTGAAGGG...GGCCTGAACAGGTCCCCTAGCAGTGCTCAAGGGAGGAGAGACTGGACTCCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
||
| CDS-3UTR CAA 90 bp | CACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATACGAAATGCTTCTTCTaGGTCTTGGTTTTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HGGPGLEWQLCDELCIDHTKCFF*VLVLLA Trigger: CGCCAGCAAAACCAAGACCAAGAAGAAGCATTTCGT...ATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS-3UTR CAA 90 bp | CACGGCGGGCCAGGCTTGGAGTGGCAGCTCTGCGATGAGCTCTGCATTGACCATAGCTTCTGCCCTTCGTaGAGGAAGTCATTATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: HGGPGLEWQLCDELCIDHSFCPS*RKSLSL Trigger: CAAAGATAATGACTTCCTCAACGAAGGGCAGAAGCT...ATGGTCAATGCAGAGCTCATCGCAGAGCTGCCACTCCAAGCCTGGCCCGCCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS-3UTR CAA 90 bp | AATCCTGAAGGAGGCTGCGGGCTGTCACTCTTTCCAAGGAGGACCGGGGGCAGATTGGACATGAACTCGTaGAAGCGTTTTGAGTACTGC | + |
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Preference number: 5 (lower is better) Translates to: NPEGGCGLSLFPRRTGGRLDMNS*KRFEYC Trigger: GCAGTACTCAAAACGCTTCAACGAGTTCATGTCCAA...TCTGCCCCCGGTCCTCCTTGGAAAGAGTGACAGCCCGCAGCCTCCTTCAGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS-3UTR CAA 90 bp | TTGTTTTTCTTCCTGGCAACCACTTGCTCTGGTGGCATCAGAATGACTTGTGTAGGGAAGCTCAGGAGGTaGCCAGGGCTGTCTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LFFFLATTCSGGIRMTCVGKLRR*PGLSGG Trigger: GCCTCCAGACAGCCCTGGCAACCTCCTGAGCTTCCC...TACACAAGTCATTCTGATGCCACCAGAGCAAGTGGTTGCCAGGAAGAAAAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS-3UTR CAA 90 bp | AAAAATCCATCTCATCCTAAATTCCGGATTCCTCCTGAGGGAGCTGGGAAGAGGCAGTACTCCTTGAACTaGAAGCGGCTGGGGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: KNPSHPKFRIPPEGAGKRQYSLN*KRLGRF Trigger: AAACCTCCCCAGCCGCTTCAAGTTCAAGGAGTACTG...CCTCTTCCCAGCTCCCTCAGGAGGAATCCGGAATTTAGGATGAGATGGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS-3UTR CAA 90 bp | AGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTATGGGGCAGTACTCCTaGAACTTGAAGCGGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RVFIVSLVSAGCETYFLSMGQYS*NLKRLG Trigger: CCCCAGCCGCTTCAAGTTCAAGGAGTACTGCCCCAT...ACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS-3UTR CAA 90 bp | AGAGTGTTCATAGTATCCCTTGTGTCAGCTGGATGCGAGACATATTTTCTCAGTAGGAAGTCATTATCTTaGAAAGTTGGCAAGTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: RVFIVSLVSAGCETYFLSRKSLS*KVGKSL Trigger: TAAGGACTTGCCAACTTTCAAAGATAATGACTTCCT...ACTGAGAAAATATGTCTCGCATCCAGCTGACACAAGGGATACTATGAACACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS GCA 72 bp | CTCCTGGGCCGAAGAACCGGGGGAAGCTCAGGAGGTTaGCAGGGCTGTCTGGAGGCGTGCCATAGGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLGRRTGGSSGG*QGCLEACHRSR Trigger: TCTGCTCCTATGGCACGCCTCCAGACAGCCCTGGCAACCTCCTGAGCTTCCCCCGGTTCTTCGGCCCAGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS CCA 72 bp | CATGGCATAGACGTCCACAGAGGGGTCGAACTCTCCTaGGCCGAAGAACCGGGGGAAGCTCAGGAGGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: HGIDVHRGVELS*AEEPGEAQEVA Trigger: GGCAACCTCCTGAGCTTCCCCCGGTTCTTCGGCCCAGGAGAGTTCGACCCCTCTGTGGACGTCTATGCCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS GCA 72 bp | TGTAGGTTTCCACCCCATCCACGGTCAGGCGGTACATaGCCAGGAACTGTGGCAAGAGGGTATTGCCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: CRFPPHPRSGGT*PGTVARGYCRD Trigger: GTCACGGCAATACCCTCTTGCCACAGTTCCTGGGCATGTACCGCCTGACCGTGGATGGGGTGGAAACCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS CAA 72 bp | TTGCTCTCTTCTCCCACGTGCAGCTTCTGCCCTTCGTaGAGGAAGTCATTATCTTTGAAAGTTGGCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLSSPTCSFCPS*RKSLSLKVGKS Trigger: GGACTTGCCAACTTTCAAAGATAATGACTTCCTCAACGAAGGGCAGAAGCTGCACGTGGGAGAAGAGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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| CDS GCA 72 bp | AAGTTCTTTTTGCTCTCTTCTCCCACGTGCAGCTTCTaGCCTTCGTTGAGGAAGTCATTATCTTTGAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: KFFLLSSPTCSF*PSLRKSLSLKV Trigger: AACTTTCAAAGATAATGACTTCCTCAACGAAGGGCAGAAGCTGCACGTGGGAGAAGAGAGCAAAAAGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018691.9 |
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