Pregenerated sensors for PIP4K2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026737Ensembl transcript IDs: ENSMUST00000006912.12, ENSMUST00000148583.8, ENSMUST00000152981.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGATGCTGAGAAGGCAGCCCACACATGTTGGGCACAGCTGGACCTaGAGAGGCCAAAAGGAAAGTGACTGGGAAGGCAGCCTGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: QMLRRQPTHVGHSWT*RGQKESDWEGSLAG Trigger: CCCTGCCAGGCTGCCTTCCCAGTCACTTTCCTTTTGGCCTCTCCAGGTCCAGCTGTGCCCAACATGTGTGGGCTGCCTTCTCAGCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 90 bp | TTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTGGTGCTaGATTGAGGTGCATTTCCGTTCCCTTCCCCCACGGGCTCATCTC | + |
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Preference number: 1 (lower is better) Translates to: FQVRKQTDLQFLLWC*IEVHFRSLPPRAHL Trigger: GAGATGAGCCCGTGGGGGAAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 90 bp | ATCTTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTGGTaGTGCATTGAGGTGCATTTCCGTTCCCTTCCCCCACGGGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: IFQVRKQTDLQFLLW*CIEVHFRSLPPRAH Trigger: ATGAGCCCGTGGGGGAAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 90 bp | TTTCAGGGACGTTTTACATCTGTTTTGCAGAGTGACTTTCTGCAGTaGAACTTAAGGATGGTAACAGTGATGGGCTCCAGGCGAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: FQGRFTSVLQSDFLQ*NLRMVTVMGSRREE Trigger: CTCTTCTCGCCTGGAGCCCATCACTGTTACCATCCTTAAGTTGCACTGCAGAAAGTCACTCTGCAAAACAGATGTAAAACGTCCCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CCA 90 bp | CATATCTTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTaGTGCTGCATTGAGGTGCATTTCCGTTCCCTTCCCCCACGGGCT | + |
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Preference number: 1 (lower is better) Translates to: HIFQVRKQTDLQFLL*CCIEVHFRSLPPRA Trigger: AGCCCGTGGGGGAAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAAGATATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 90 bp | AATTCCATTCCTAAACAATGGCTAAACATAAACCATAACTGGGTTTaGCTTCGGCCACTGGAGGGTTTGAACTCCCTGCTCATCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NSIPKQWLNINHNWV*LRPLEGLNSLLIFL Trigger: CAGGAAGATGAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGGCAAACCCAGTTATGGTTTATGTTTAGCCATTGTTTAGGAATGGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR TCA 90 bp | CAAACTATGCACCTTTCAGGGACGTTTTACATCTGTTTTGCAGAGTaGCTTTCTGCAGTGCAACTTAAGGATGGTAACAGTGATGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: QTMHLSGTFYICFAE*LSAVQLKDGNSDGL Trigger: GAGCCCATCACTGTTACCATCCTTAAGTTGCACTGCAGAAAGTCACTCTGCAAAACAGATGTAAAACGTCCCTGAAAGGTGCATAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 90 bp | TGTCTACTAAGTACTCTCAACAAAACACTCACTCAGAAACACAACTaGAAGACATATCTCAAAACACAACAAACATTATGTTCCCTACAC | + |
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Preference number: 1 (lower is better) Translates to: CLLSTLNKTLTQKHN*KTYLKTQQTLCSLH Trigger: GTGTAGGGAACATAATGTTTGTTGTGTTTTGAGATATGTCTTGCAGTTGTGTTTCTGAGTGAGTGTTTTGTTGAGAGTACTTAGTAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR GCA 90 bp | GGGAAATATCAGGTAGCTGTTAAAGCGAGTAGCCCCCAACTTCAGTCATGTCAGGCCTTCCCGAGTTCATaGCCATCCGGGGCTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GKYQVAVKASSPQLQSCQAFPSS*PSGAVQ Trigger: CTGCACAGCCCCGGATGGGCATGAACTCGGGAAGGC...CTGACATGACTGAAGTTGGGGGCTACTCGCTTTAACAGCTACCTGATATTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR GCA 90 bp | CCTTCGGCCACTGGAGGGTTTGAACTCCCTGCTCATCTTCCTGCATTGGGAGATCAGTACACAGGGAGATaGTTGTATCCCTTTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSATGGFELPAHLPALGDQYTGR*LYPFTR Trigger: CCTGGTAAAGGGATACAAGCATCTCCCTGTGTACTG...ATCTCCCAATGCAGGAAGATGAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTCGGCCACTGGAGGGTTTGAACTCCCTGCTCATCTTCCTGCATTGGGAGATGGCTGTTACAAGCTCTaGTTCAAGCTGATCAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PSATGGFELPAHLPALGDGCYKL*FKLISF Trigger: AAAACTGATCAGCTTGAATCAGAGCTTGTAACAGCC...ATCTCCCAATGCAGGAAGATGAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR GCA 90 bp | CCTTCGGCCACTGGAGGGTTTGAACTCCCTGCTCATCTTCCTGCATTGGGAGATAGTGACTTTCTGCAGTaGAACTTAAGGATGGTAACA | + |
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Preference number: 2 (lower is better) Translates to: PSATGGFELPAHLPALGDSDFLQ*NLRMVT Trigger: TGTTACCATCCTTAAGTTGCACTGCAGAAAGTCACT...ATCTCCCAATGCAGGAAGATGAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTCGGCCACTGGAGGGTTTGAACTCCCTGCTCATCTTCCTGCATTGGGAGATAGTCAGAAAACAAACTaGTCTACAGTTTCTCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: PSATGGFELPAHLPALGDSQKTN*STVSLV Trigger: CACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACT...ATCTCCCAATGCAGGAAGATGAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CAA 90 bp | AGAAATGCAAGTGGTTTTCCTGGAGGTGAAATTGTTGACAGGTTCTaGGCATCAGACTCTTGGAAGATGAAGGGCTTAGCCTGGGACATC | + |
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Preference number: 2 (lower is better) Translates to: RNASGFPGGEIVDRF*ASDSWKMKGLAWDI Trigger: GATGTCCCAGGCTAAGCCCTTCATCTTCCAAGAGTCTGATGCCAAGAACCTGTCAACAATTTCACCTCCAGGAAAACCACTTGCATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CAA 90 bp | TCTCATATCTTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTaGTGGTGCTGCATTGAGGTGCATTTCCGTTCCCTTCCCCCACGG | + |
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Preference number: 2 (lower is better) Translates to: SHIFQVRKQTDLQFL*WCCIEVHFRSLPPR Trigger: CCGTGGGGGAAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAAGATATGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CAA 90 bp | ATTTGCCCCAAACTATGCACCTTTCAGGGACGTTTTACATCTGTTTaGCAGAGTGACTTTCTGCAGTGCAACTTAAGGATGGTAACAGTG | + |
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Preference number: 2 (lower is better) Translates to: ICPKLCTFQGRFTSV*QSDFLQCNLRMVTV Trigger: CACTGTTACCATCCTTAAGTTGCACTGCAGAAAGTCACTCTGCAAAACAGATGTAAAACGTCCCTGAAAGGTGCATAGTTTGGGGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR TCA 90 bp | AAAACACTCACTCAGAAACACAACTGCAAGACATATCTCAAAACACAACAAACACTTTTCTTCCTACCCTaGAGCCACCACCAGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KTLTQKHNCKTYLKTQQTLFFLP*SHHQPS Trigger: GGAAGGCTGGTGGTGGCTTCAGGGTAGGAAGAAAAG...TGTTTGTTGTGTTTTGAGATATGTCTTGCAGTTGTGTTTCTGAGTGAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR CCA 90 bp | AGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTTTGAAGGTGAGCGCTTCCTaGGGTTCGGTTTTCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SYTRSAQFRAMNLHNQILKVSAS*GSVFLF Trigger: GAAAAGGAAAACCGAACCCCAGGAAGCGCTCACCTT...CAAAATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTTTGGCATCAGACTCTTaGAAGATGAAGGGCTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: LSYTRSAQFRAMNLHNQILASDS*KMKGLA Trigger: GGCTAAGCCCTTCATCTTCCAAGAGTCTGATGCCAA...AATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAACACAACAAACATTATGTTCCCTACACTGCAAAATGGCTTTACATGTGTGCACGCACGTGTGTaGACACGTACAGAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SQNTTNIMFPTLQNGFTCVHARV*TRTESE Trigger: TTCTGACTCTGTACGTGTGCACACACGTGCGTGCAC...ACATGTAAAGCCATTTTGCAGTGTAGGGAACATAATGTTTGTTGTGTTTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAACACAACAAACATTATGTTCCCTACACTGCAAAATGGCTTTACATGTGATGTAAACAAGGCTTaGTTCCTGCAAGGTGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: SQNTTNIMFPTLQNGFTCDVNKA*FLQGER Trigger: GCGCTCACCTTGCAGGAAGCAAGCCTTGTTTACATC...ACATGTAAAGCCATTTTGCAGTGTAGGGAACATAATGTTTGTTGTGTTTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR TCA 72 bp | TGGGCACAGCTGGACCTGGAGAGGCCAAAAGGAAAGTaGCTGGGAAGGCAGCCTGGCAGGGGACTTGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: WAQLDLERPKGK*LGRQPGRGLVD Trigger: GTCAACAAGTCCCCTGCCAGGCTGCCTTCCCAGTCACTTTCCTTTTGGCCTCTCCAGGTCCAGCTGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CCA 72 bp | AGAAGGCAGCCCACACATGTTGGGCACAGCTGGACCTaGAGAGGCCAAAAGGAAAGTGACTGGGAAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RRQPTHVGHSWT*RGQKESDWEGS Trigger: GCTGCCTTCCCAGTCACTTTCCTTTTGGCCTCTCCAGGTCCAGCTGTGCCCAACATGTGTGGGCTGCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR TCA 72 bp | AGGAGTCAGATGGTGCTGATGCTGGCTTCCAGATGCTaGGAAGGCAGCCCACACATGTTGGGCACAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: RSQMVLMLASRC*EGSPHMLGTAG Trigger: TCCAGCTGTGCCCAACATGTGTGGGCTGCCTTCTCAGCATCTGGAAGCCAGCATCAGCACCATCTGACTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR TCA 72 bp | TCTGTGGCAGGTCAGTACACAGGAGTCAGATGGTGCTaGTGCTGGCTTCCAGATGCTGAGAAGGCAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: SVAGQYTGVRWC*CWLPDAEKAAH Trigger: GTGGGCTGCCTTCTCAGCATCTGGAAGCCAGCATCAGCACCATCTGACTCCTGTGTACTGACCTGCCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CCA 72 bp | TGGCTTCCAGATGCTGAGAAGGCAGCCCACACATGTTaGGCACAGCTGGACCTGGAGAGGCCAAAAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: WLPDAEKAAHTC*AQLDLERPKGK Trigger: CTTTCCTTTTGGCCTCTCCAGGTCCAGCTGTGCCCAACATGTGTGGGCTGCCTTCTCAGCATCTGGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CCA 72 bp | ATGCTGAGAAGGCAGCCCACACATGTTGGGCACAGCTaGACCTGGAGAGGCCAAAAGGAAAGTGACTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: MLRRQPTHVGHS*TWRGQKESDWE Trigger: TTCCCAGTCACTTTCCTTTTGGCCTCTCCAGGTCCAGCTGTGCCCAACATGTGTGGGCTGCCTTCTCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR TCA 72 bp | ACCATAACTGGGTTTGCCTTCGGCCACTGGAGGGTTTaGACTCCCTGCTCATCTTCCTGCATTGGGAGATGT | + |
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Preference number: 3 (lower is better) Translates to: TITGFAFGHWRV*TPCSSSCIGRC Trigger: ACATCTCCCAATGCAGGAAGATGAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGGCAAACCCAGTTATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 72 bp | CTGATCTACAGTTTCTCTTGTGGTGCTGCATTGAGGTaGATTTCCGTTCCCTTCCCCCACGGGCTCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: LIYSFSCGAALR*ISVPFPHGLIS Trigger: AGAGATGAGCCCGTGGGGGAAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 72 bp | CTTCAGTCATGTCAGCTTGAAGATGTAAACAAGGCTTaGTTCCTGCAAGGTGAGCGCTTCCTGGGGTTCGGT | + |
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Preference number: 3 (lower is better) Translates to: LQSCQLEDVNKA*FLQGERFLGFG Trigger: ACCGAACCCCAGGAAGCGCTCACCTTGCAGGAAGCAAGCCTTGTTTACATCTTCAAGCTGACATGACTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CCA 72 bp | TCTATCCGTGGGGCCACAGCTGGAATCAGAGGGGTCTaGCTGTTACAAGCTCTGATTCAAGCTGATCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: SIRGATAGIRGV*LLQALIQADQF Trigger: AAACTGATCAGCTTGAATCAGAGCTTGTAACAGCCAGACCCCTCTGATTCCAGCTGTGGCCCCACGGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR TCA 72 bp | AGTCATCAAAGTGCTTTATTCGTAAAGCCCGGATCATaGCTCGAGCGCACACTGTTAGCACTGTTCTCGCTC | + |
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Preference number: 3 (lower is better) Translates to: SHQSALFVKPGS*LERTLLALFSL Trigger: GAGCGAGAACAGTGCTAACAGTGTGCGCTCGAGTCATGATCCGGGCTTTACGAATAAAGCACTTTGATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 72 bp | TGCTCATCTTCCTGCATTGGGAGATGTAGCCGCATTTaGCCCAAACTATGCACCTTTCAGGGACGTTTTACA | + |
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Preference number: 3 (lower is better) Translates to: CSSSCIGRCSRI*PKLCTFQGRFT Trigger: TGTAAAACGTCCCTGAAAGGTGCATAGTTTGGGGCAAATGCGGCTACATCTCCCAATGCAGGAAGATGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 72 bp | CCTAAACAATGGCTAAACATAAACCATAACTGGGTTTaGCTTCGGCCACTGGAGGGTTTGAACTCCCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: PKQWLNINHNWV*LRPLEGLNSLL Trigger: GAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGGCAAACCCAGTTATGGTTTATGTTTAGCCATTGTTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 72 bp | CGTTTTACATCTGTTTTGCAGAGTGACTTTCTGCAGTaGAACTTAAGGATGGTAACAGTGATGGGCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RFTSVLQSDFLQ*NLRMVTVMGSR Trigger: CCTGGAGCCCATCACTGTTACCATCCTTAAGTTGCACTGCAGAAAGTCACTCTGCAAAACAGATGTAAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CCA 72 bp | CAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTaGTGCTGCATTGAGGTGCATTTCCGTTCCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: QVRKQTDLQFLL*CCIEVHFRSLP Trigger: GGGAAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CCA 72 bp | GTTAGCACTGTTCTCGCTCTTGTCCAAACAGCTTATTaGGATGACAGAGATGGTTACAGACAAAAACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VSTVLALVQTAY*DDRDGYRQKPK Trigger: CTTTGGTTTTTGTCTGTAACCATCTCTGTCATCCCAATAAGCTGTTTGGACAAGAGCGAGAACAGTGCTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR CAA 90 bp | AGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTTTGCTGGAGGTGAAATTGTaGACAGGTTCTTGGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: SYTRSAQFRAMNLHNQILLEVKL*TGSWHQ Trigger: CTGATGCCAAGAACCTGTCAACAATTTCACCTCCAG...CAAAATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR GCA 72 bp | CAGTGCCCGGAAACGGAGTCAACTGGTTATTTTAAATaGATCAGGTACAGATGTGTACAACTATGTTACAGT | + |
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Preference number: 3 (lower is better) Translates to: QCPETESTGYFK*IRYRCVQLCYS Trigger: ACTGTAACATAGTTGTACACATCTGTACCTGATGCATTTAAAATAACCAGTTGACTCCGTTTCCGGGCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR-3UTR CAA 90 bp | CAACTGGTTATTTTAAATGCATCAGGTACAGATGTGTACAACTATGTTACAGTGATTGTTGACAGGTTCTaGGCATCAGACTCTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: QLVILNASGTDVYNYVTVIVDRF*ASDSWK Trigger: CTTCCAAGAGTCTGATGCCAAGAACCTGTCAACAAT...CACTGTAACATAGTTGTACACATCTGTACCTGATGCATTTAAAATAACCAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| CDS-3UTR CCA 90 bp | GGTGCATTTCCGTTCCCTTCCCCCACGGGCTCATCTCTTCATCTATCCGTGGGGGCCCCGCTGCGAGCCTaGGAGTCATTGGGAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GAFPFPSPTGSSLHLSVGAPLRA*ESLGRG Trigger: ACCCCTTCCCAATGACTCCCAGGCTCGCAGCGGGGC...CCCCACGGATAGATGAAGAGATGAGCCCGTGGGGGAAGGGAACGGAAATGCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| CDS-3UTR TCA 90 bp | TTCCGTTCCCTTCCCCCACGGGCTCATCTCTTCATCTATCCGTGGGGCCACAGCGGAGGCTGTAGTCCATaGGTTTTAACTGTGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: FRSLPPRAHLFIYPWGHSGGCSP*VLTVQG Trigger: TCCTTGCACAGTTAAAACTCATGGACTACAGCCTCC...GCTGTGGCCCCACGGATAGATGAAGAGATGAGCCCGTGGGGGAAGGGAACGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| CDS-3UTR GCA 90 bp | GGGAAATATCAGGTAGCTGTTAAAGCGAGTAGCCCCCAACTTCAGTCATGTCAGTCTTCGTCTTGGTCTTaGTCGCCAGGACGGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: GKYQVAVKASSPQLQSCQSSSWS*SPGRRT Trigger: GGTCCTCCGTCCTGGCGAGCAAGACCAAGACGAAGA...CTGACATGACTGAAGTTGGGGGCTACTCGCTTTAACAGCTACCTGATATTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| CDS-3UTR GCA 90 bp | TTCCGTTCCCTTCCCCCACGGGCTCATCTCTTCATCTATCCGTGGGGCCACAGCATGTTTAACAGTTTTTaGAGCGTGGGCAGCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FRSLPPRAHLFIYPWGHSMFNSF*SVGSFL Trigger: AAGAAAGCTGCCCACGCTGCAAAAACTGTTAAACAT...GCTGTGGCCCCACGGATAGATGAAGAGATGAGCCCGTGGGGGAAGGGAACGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| CDS-3UTR CCA 90 bp | GGTGCATTTCCGTTCCCTTCCCCCACGGGCTCATCTCTTCATCTATCCGTGGGGCTGGTCAAGGAATTCTaGAAATCTTGGTCGTCGATT | + |
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Preference number: 4 (lower is better) Translates to: GAFPFPSPTGSSLHLSVGLVKEF*KSWSSI Trigger: AATCGACGACCAAGATTTCCAGAATTCCTTGACCAG...CCCCACGGATAGATGAAGAGATGAGCCCGTGGGGGAAGGGAACGGAAATGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CAA 72 bp | AACAAACTGATCTACAGTTTCTCTTGTGGTGCTGCATaGAGGTGCATTTCCGTTCCCTTCCCCCACGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NKLIYSFSCGAA*RCISVPFPHGL Trigger: GAGCCCGTGGGGGAAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| CDS-3UTR TCA 90 bp | AACTTAAGGATGGTAACAGTGATGGGCTCCAGGCGAGAAGAGAAATGCAAGTGGCATCAGGCATCAACATaGCAGGGATTTGAACGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NLRMVTVMGSRREEKCKWHQAST*QGFERG Trigger: GCCACGTTCAAATCCCTGTCATGTTGATGCCTGATG...CCACTTGCATTTCTCTTCTCGCCTGGAGCCCATCACTGTTACCATCCTTAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| CDS-3UTR TCA 90 bp | CTATGCACCTTTCAGGGACGTTTTACATCTGTTTTGCAGAGTGACTTTCTGCAGAGGGTGGTGAGCTGTTaGGTGTATTTCCGGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: LCTFQGRFTSVLQSDFLQRVVSC*VYFRDC Trigger: ACAGTCCCGGAAATACACTCAACAGCTCACCACCCT...CTGCAGAAAGTCACTCTGCAAAACAGATGTAAAACGTCCCTGAAAGGTGCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
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| 3UTR CAA 72 bp | AGTGGTTTTCCTGGAGGTGAAATTGTTGACAGGTTCTaGGCATCAGACTCTTGGAAGATGAAGGGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGFPGGEIVDRF*ASDSWKMKGLA Trigger: GGCTAAGCCCTTCATCTTCCAAGAGTCTGATGCCAAGAACCTGTCAACAATTTCACCTCCAGGAAAACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR GCA 90 bp | TCTTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTGGTGCTGCATTGCACCTCCTCCTGCTCTaGTCGCTCCACATCGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFKSENKLIYSFSCGAALHLLLL*SLHIVN Trigger: ATTCACGATGTGGAGCGAGCAGAGCAGGAGGAGGTG...CAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR GCA 90 bp | GGTTACAAGATGTGCCCAATAAAGTCCAAAAAGCGCTTGGAATACTGCTCTGGGATGTTTAACAGTTTTTaGAGCGTGGGCAGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GYKMCPIKSKKRLEYCSGMFNSF*SVGSFL Trigger: AAGAAAGCTGCCCACGCTGCAAAAACTGTTAAACAT...CCCAGAGCAGTATTCCAAGCGCTTTTTGGACTTTATTGGGCACATCTTGTAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148583.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAACACAACAAACATTATGTTCCCTACACTGCAAAATGGCTTTACATGTGCTTCTTCTTCGTCTTaGTCTTGCTCGCCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SQNTTNIMFPTLQNGFTCASSSS*SCSPGR Trigger: CCGTCCTGGCGAGCAAGACCAAGACGAAGAAGAAGC...ACATGTAAAGCCATTTTGCAGTGTAGGGAACATAATGTTTGTTGTGTTTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| 3UTR CAA 72 bp | AGAAGAGAAATGCAAGTGGTTTTCCTGGAGGTGAAATaGTTGACAGGTTCTTGGCATCAGACTCTTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RREMQVVFLEVK*LTGSWHQTLGR Trigger: TCTTCCAAGAGTCTGATGCCAAGAACCTGTCAACAATTTCACCTCCAGGAAAACCACTTGCATTTCTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTAACATGACAGGGATTTaGACGTGGCTCAGTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LSYTRSAQFRAMNLHNQINMTGI*TWLSSL Trigger: CAATGAACTGAGCCACGTTCAAATCCCTGTCATGTT...AATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| 3UTR CAA 72 bp | TTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTaGTGGTGCTGCATTGAGGTGCATTTCCGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQVRKQTDLQFL*WCCIEVHFRSL Trigger: AAGGGAACGGAAATGCACCTCAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| 3UTR CAA 72 bp | AAACTATGCACCTTTCAGGGACGTTTTACATCTGTTTaGCAGAGTGACTTTCTGCAGTGCAACTTAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KLCTFQGRFTSV*QSDFLQCNLRM Trigger: CATCCTTAAGTTGCACTGCAGAAAGTCACTCTGCAAAACAGATGTAAAACGTCCCTGAAAGGTGCATAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTGGTGCTGCATTGGAAGGGGTGCACTTCTaGTCAAGGAATTCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFKSENKLIYSFSCGAALEGVHF*SRNSGN Trigger: ATTTCCAGAATTCCTTGACCAGAAGTGCACCCCTTC...CAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CCA 90 bp | AGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTTTGAGTCCAAAAAGCGCTTaGAATACTGCTCTGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYTRSAQFRAMNLHNQILSPKSA*NTALGS Trigger: TGAACCCAGAGCAGTATTCCAAGCGCTTTTTGGACT...CAAAATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CCA 90 bp | AAAACACTCACTCAGAAACACAACTGCAAGACATATCTCAAAACACAACAAACACTTGGAATACTGCTCTaGGTTCACAGTCGAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLTQKHNCKTYLKTQQTLGILL*VHSRDL Trigger: GAGATCTCGACTGTGAACCCAGAGCAGTATTCCAAG...TGTTTGTTGTGTTTTGAGATATGTCTTGCAGTTGTGTTTCTGAGTGAGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR TCA 90 bp | CAACTGGTTATTTTAAATGCATCAGGTACAGATGTGTACAACTATGTTACAGTGAGAAGTGTGACCCCATaGCATTCCACTATATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLVILNASGTDVYNYVTVRSVTP*HSTIYW Trigger: CCAGTATATAGTGGAATGTCATGGGGTCACACTTCT...CACTGTAACATAGTTGTACACATCTGTACCTGATGCATTTAAAATAACCAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTGGTGCTGCATTGTCCTTAAACTTGAAATaGCTCGGCATGTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFKSENKLIYSFSCGAALSLNLK*LGMFSL Trigger: CAAGGAAAACATGCCGAGCCATTTCAAGTTTAAGGA...CAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTATAAACATCAATGTTTaGATCAAACTCTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYTRSAQFRAMNLHNQIININV*IKLSRS Trigger: GCTCCTGGAGAGTTTGATCCAAACATTGATGTTTAT...AATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAACACAACAAACATTATGTTCCCTACACTGCAAAATGGCTTTACATGTGAATTCTGGAAATCTTaGTCGTCGATTCCAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQNTTNIMFPTLQNGFTCEFWKS*SSIPNL Trigger: GAGGTTTGGAATCGACGACCAAGATTTCCAGAATTC...ACATGTAAAGCCATTTTGCAGTGTAGGGAACATAATGTTTGTTGTGTTTTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAACACAACAAACATTATGTTCCCTACACTGCAAAATGGCTTTACATGTTCCACTATATACTGGTaGTACTTCTTCAGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQNTTNIMFPTLQNGFTCSTIYW*YFFRML Trigger: CAACATCCTGAAGAAGTACCACCAGTATATAGTGGA...ACATGTAAAGCCATTTTGCAGTGTAGGGAACATAATGTTTGTTGTGTTTTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS TCA 90 bp | CAATGTTTGGATCAAACTCTCCAGGAGCCAAGGGTGGTGAGCTGTTaGGTGTATTTCCGGGACTGTCTGGTGGCGTCCCGATCGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCLDQTLQEPRVVSC*VYFRDCLVASRSGG Trigger: CCCACCCGATCGGGACGCCACCAGACAGTCCCGGAAATACACTCAACAGCTCACCACCCTTGGCTCCTGGAGAGTTTGATCCAAACATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS GCA 90 bp | GTGAAACCGAGCCCCGCTGCGAGCCTGGGAGTCATTGGGAAGGGGTaGACTTCTGGTCAAGGAATTCTGGAAATCTTGGTCGTCGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKPSPAASLGVIGKG*TSGQGILEILVVDS Trigger: GGAATCGACGACCAAGATTTCCAGAATTCCTTGACCAGAAGTGCACCCCTTCCCAATGACTCCCAGGCTCGCAGCGGGGCTCGGTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006912.12 ENSMUST00000152981.2 |
||
| CDS CCA 90 bp | CTGTTGAGTGTATTTCCGGGACTGTCTGGTGGCGTCCCGATCGGGTaGGTGCTGTCACTCTCTCCTTCTTCTTCCCCATCGTTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSVFPGLSGGVPIG*VLSLSPSSSPSFSS Trigger: TGAGGAGAACGATGGGGAAGAAGAAGGAGAGAGTGACAGCACCCACCCGATCGGGACGCCACCAGACAGTCCCGGAAATACACTCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006912.12 ENSMUST00000152981.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCGGCCACTGGAGGGTTTGAACTCCCTGCTCATCTTCCTGCATTGGGAGATAAGGGTGGTGAGCTGTaGAGTGTATTTCCGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSATGGFELPAHLPALGDKGGEL*SVFPGL Trigger: CAGTCCCGGAAATACACTCAACAGCTCACCACCCTT...ATCTCCCAATGCAGGAAGATGAGCAGGGAGTTCAAACCCTCCAGTGGCCGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | GGTGCATTTCCGTTCCCTTCCCCCACGGGCTCATCTCTTCATCTATCCGTGGGGAAAGTTGGCAGCTCTTaGGCCTTTTCTTTATCACTA | + |
|
Preference number: 5 (lower is better) Translates to: GAFPFPSPTGSSLHLSVGKVGSS*AFSLSL Trigger: TAGTGATAAAGAAAAGGCCAAAGAGCTGCCAACTTT...CCCCACGGATAGATGAAGAGATGAGCCCGTGGGGGAAGGGAACGGAAATGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS TCA 90 bp | ATAAACATCAATGTTTGGATCAAACTCTCCAGGAGCCAAGGGTGGTaGGCTGTTGAGTGTATTTCCGGGACTGTCTGGTGGCGTCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: ININVWIKLSRSQGW*AVECISGTVWWRPD Trigger: ATCGGGACGCCACCAGACAGTCCCGGAAATACACTCAACAGCTCACCACCCTTGGCTCCTGGAGAGTTTGATCCAAACATTGATGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | GGGAAATATCAGGTAGCTGTTAAAGCGAGTAGCCCCCAACTTCAGTCATGTCAGTACTTCTTCAGGATGTaGTGCATCTCTGCCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKYQVAVKASSPQLQSCQYFFRM*CISATS Trigger: GGACGTGGCAGAGATGCACAACATCCTGAAGAAGTA...CTGACATGACTGAAGTTGGGGGCTACTCGCTTTAACAGCTACCTGATATTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | GGGAAATATCAGGTAGCTGTTAAAGCGAGTAGCCCCCAACTTCAGTCATGTCAGCTCGGCATGTTTTCCTaGTTAAAAAGGTGGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKYQVAVKASSPQLQSCQLGMFS*LKRWLS Trigger: TGACAACCACCTTTTTAACAAGGAAAACATGCCGAG...CTGACATGACTGAAGTTGGGGGCTACTCGCTTTAACAGCTACCTGATATTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | TCTCAAAACACAACAAACATTATGTTCCCTACACTGCAAAATGGCTTTACATGTCGAGCCTGGGAGTCATaGGGAAGGGGTGCACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQNTTNIMFPTLQNGFTCRAWES*GRGALL Trigger: CAGAAGTGCACCCCTTCCCAATGACTCCCAGGCTCG...ACATGTAAAGCCATTTTGCAGTGTAGGGAACATAATGTTTGTTGTGTTTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | CAACTGGTTATTTTAAATGCATCAGGTACAGATGTGTACAACTATGTTACAGTGTTCTTCGTCTTGGTCTaGCTCGCCAGGACGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLVILNASGTDVYNYVTVFFVLV*LARTED Trigger: GTCCTCCGTCCTGGCGAGCAAGACCAAGACGAAGAA...CACTGTAACATAGTTGTACACATCTGTACCTGATGCATTTAAAATAACCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | GGTTACAAGATGTGCCCAATAAAGTCCAAAAAGCGCTTGGAATACTGCTCTGGGCATTATCCTTTAAAGTaGGCAGCTCTTTGGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GYKMCPIKSKKRLEYCSGHYPLK*AALWPF Trigger: AAAAGGCCAAAGAGCTGCCAACTTTAAAGGATAATG...CCCAGAGCAGTATTCCAAGCGCTTTTTGGACTTTATTGGGCACATCTTGTAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148583.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAATATCAGGTAGCTGTTAAAGCGAGTAGCCCCCAACTTCAGTCATGTCAGATCAATATAGATCTTTaGGCCCTCATTGATGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKYQVAVKASSPQLQSCQINIDL*ALIDEV Trigger: GACTTCATCAATGAGGGCCAAAAGATCTATATTGAT...CTGACATGACTGAAGTTGGGGGCTACTCGCTTTAACAGCTACCTGATATTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTAAGTCCAAAAAGCGCTaGGAATACTGCTCTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSYTRSAQFRAMNLHNQIKSKKR*EYCSGF Trigger: GAACCCAGAGCAGTATTCCAAGCGCTTTTTGGACTT...AATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS CCA 90 bp | ACTGTCGAGCCCTTTAAGTCGTATTTCCTATATACAGATAGCCGGTaGCTGAACACATTCCTTGTAACAATCACATATATTTCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVEPFKSYFLYTDSR*LNTFLVTITYISTP Trigger: TGGAGTGGAAATATATGTGATTGTTACAAGGAATGTGTTCAGCCACCGGCTATCTGTATATAGGAAATACGACTTAAAGGGCTCGACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | TCTTTCAAGTCAGAAAACAAACTGATCTACAGTTTCTCTTGTGGTGCTGCATTGCAACATGACAGGGATTaGAACGTGGCTCAGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SFKSENKLIYSFSCGAALQHDRD*NVAQFI Trigger: AATGAACTGAGCCACGTTCAAATCCCTGTCATGTTG...CAATGCAGCACCACAAGAGAAACTGTAGATCAGTTTGTTTTCTGACTTGAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | CTGTGCAGAAGGTTACAAGATGTGCCCAATAAAGTCCAAAAAGCGCTTGGAATAATCAATATAGATCTTTaGGCCCTCATTGATGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LCRRLQDVPNKVQKALGIINIDL*ALIDEV Trigger: GACTTCATCAATGAGGGCCAAAAGATCTATATTGAT...TATTCCAAGCGCTTTTTGGACTTTATTGGGCACATCTTGTAACCTTCTGCACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148583.8 |
||
| CDS-3UTR CAA 90 bp | CAACTGGTTATTTTAAATGCATCAGGTACAGATGTGTACAACTATGTTACAGTGGGAATTCTGGAAATCTaGGTCGTCGATTCCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: QLVILNASGTDVYNYVTVGILEI*VVDSKP Trigger: AGGTTTGGAATCGACGACCAAGATTTCCAGAATTCC...CACTGTAACATAGTTGTACACATCTGTACCTGATGCATTTAAAATAACCAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | AGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTTTGCATTATCCTTTAAAGTaGGCAGCTCTTTGGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SYTRSAQFRAMNLHNQILHYPLK*AALWPF Trigger: AAAAGGCCAAAGAGCTGCCAACTTTAAAGGATAATG...CAAAATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | AGTTACACACGATCAGCACAGTTTAGGGCAATGAACTTACATAACCAGATTTTGTCACTGGTAATGGTCTaGATGACGTATCTTTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: SYTRSAQFRAMNLHNQILSLVMV*MTYLLS Trigger: TGATAAAAGATACGTCATCAAGACCATTACCAGTGA...CAAAATCTGGTTATGTAAGTTCATTGCCCTAAACTGTGCTGATCGTGTGTAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | AAAACACTCACTCAGAAACACAACTGCAAGACATATCTCAAAACACAACAAACACAGTATTCCTTAAACTaGAAATGGCTCGGCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTLTQKHNCKTYLKTQQTQYSLN*KWLGMF Trigger: AAACATGCCGAGCCATTTCAAGTTTAAGGAATACTG...TGTTTGTTGTGTTTTGAGATATGTCTTGCAGTTGTGTTTCTGAGTGAGTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS-3UTR CAA 90 bp | TCTCAAAACACAACAAACATTATGTTCCCTACACTGCAAAATGGCTTTACATGTCATAAACATCAATGTTaGGATCAAACTCTCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQNTTNIMFPTLQNGFTCHKHQC*DQTLQE Trigger: CTCCTGGAGAGTTTGATCCAAACATTGATGTTTATG...ACATGTAAAGCCATTTTGCAGTGTAGGGAACATAATGTTTGTTGTGTTTTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS CAA 72 bp | GGATCAAACTCTCCAGGAGCCAAGGGTGGTGAGCTGTaGAGTGTATTTCCGGGACTGTCTGGTGGCGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSNSPGAKGGEL*SVFPGLSGGVP Trigger: CGGGACGCCACCAGACAGTCCCGGAAATACACTCAACAGCTCACCACCCTTGGCTCCTGGAGAGTTTGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS GCA 72 bp | AGCCCCGCTGCGAGCCTGGGAGTCATTGGGAAGGGGTaGACTTCTGGTCAAGGAATTCTGGAAATCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPAASLGVIGKG*TSGQGILEILV Trigger: GACCAAGATTTCCAGAATTCCTTGACCAGAAGTGCACCCCTTCCCAATGACTCCCAGGCTCGCAGCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006912.12 ENSMUST00000152981.2 |
||
| CDS CAA 90 bp | TCAATGTTTGGATCAAACTCTCCAGGAGCCAAGGGTGGTGAGCTGTaGAGTGTATTTCCGGGACTGTCTGGTGGCGTCCCGATCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMFGSNSPGAKGGEL*SVFPGLSGGVPIGW Trigger: CCACCCGATCGGGACGCCACCAGACAGTCCCGGAAATACACTCAACAGCTCACCACCCTTGGCTCCTGGAGAGTTTGATCCAAACATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS CAA 90 bp | CTCTCCCGCAGATTCCGGAAGACCATTGGGCAGTATTCCTTAAACTaGAAATGGCTCGGCATGTTTTCCTTGTTAAAAAGGTGGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSRRFRKTIGQYSLN*KWLGMFSLLKRWLS Trigger: TGACAACCACCTTTTTAACAAGGAAAACATGCCGAGCCATTTCAAGTTTAAGGAATACTGCCCAATGGTCTTCCGGAATCTGCGGGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS CAA 72 bp | AGATTCCGGAAGACCATTGGGCAGTATTCCTTAAACTaGAAATGGCTCGGCATGTTTTCCTTGTTAAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RFRKTIGQYSLN*KWLGMFSLLKR Trigger: CCTTTTTAACAAGGAAAACATGCCGAGCCATTTCAAGTTTAAGGAATACTGCCCAATGGTCTTCCGGAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS CCA 72 bp | CCCTTTAAGTCGTATTTCCTATATACAGATAGCCGGTaGCTGAACACATTCCTTGTAACAATCACATATATT | + |
|
Preference number: 6 (lower is better) Translates to: PFKSYFLYTDSR*LNTFLVTITYI Trigger: AATATATGTGATTGTTACAAGGAATGTGTTCAGCCACCGGCTATCTGTATATAGGAAATACGACTTAAAGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006912.12 |
||
| CDS CCA 72 bp | GCCTTTAAGTCGTATTTCCTATATACAGATAGCCGGTaGCTGAACACATTCCTTGTAACAATCACATATATT | + |
|
Preference number: 6 (lower is better) Translates to: AFKSYFLYTDSR*LNTFLVTITYI Trigger: AATATATGTGATTGTTACAAGGAATGTGTTCAGCCACCGGCTATCTGTATATAGGAAATACGACTTAAAGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152981.2 |
||
| CDS CAA 72 bp | TTGATGAAGTCATTATCCTTTAAAGTTGGCAGCTCTTaGGCCTTTAAGTCGTATTTCCTATATACAGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: LMKSLSFKVGSS*AFKSYFLYTDS Trigger: GCTATCTGTATATAGGAAATACGACTTAAAGGCCAAAGAGCTGCCAACTTTAAAGGATAATGACTTCATCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152981.2 |
||