Pregenerated sensors for PINK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028756Ensembl transcript IDs: ENSMUST00000030536.13, ENSMUST00000105816.8, ENSMUST00000105817.4
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTTCATTCCCTGTCTGGCCCTCTATAGCTTACCAACTCCTGGTCTaGCCTGATGTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCA | + |
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Preference number: 1 (lower is better) Translates to: TSFPVWPSIAYQLLV*PDVLILPKNLTGRA Trigger: TGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAGACAGGGAATGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR GCA 90 bp | AAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGGCCTTTaGCTCAGTGATAGGTTAGTCATTACAACTACTTCATTCCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: KQSSVLASLQCLLGL*LSDRLVITTTSFPV Trigger: GACAGGGAATGAAGTAGTTGTAATGACTAACCTATCACTGAGGCAAAGGCCAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR GCA 90 bp | GAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTaGTTGCTTGGCCTTTGCCTCAGTGATAGGTTAGTCATTACAACT | + |
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Preference number: 1 (lower is better) Translates to: ELIDDKQSSVLASLQ*LLGLCLSDRLVITT Trigger: AGTTGTAATGACTAACCTATCACTGAGGCAAAGGCCAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTCATTCCCTGTCTGGCCCTCTATAGCTTACCAACTCCTGGTCTGGCCTGATTTGTCCCCTGACTCCTaGCCACCCAGCCAAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: TSFPVWPSIAYQLLVWPDLSPDS*PPSQAT Trigger: GGTGGCTTGGCTGGGTGGGCAGGAGTCAGGGGACAA...ATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAGACAGGGAATGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR-3UTR GCA 90 bp | AACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGTTGTCCCCTGACTCCTaGCCACCCAGCCAAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: NLLTTSKVQCWPHCSACLLSPDS*PPSQAT Trigger: GGTGGCTTGGCTGGGTGGGCAGGAGTCAGGGGACAA...CAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTACTCCTGGTCTGGCCTaGTGTCTTAATTCTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSTPGLA*CLNSAQ Trigger: TTGGGCAGAATTAAGACATCAGGCCAGACCAGGAGT...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR CAA 90 bp | CTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTaGCTTGGCCTTTGCCTCAGTGATAGGTTAGTCATTACAACTACT | + |
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Preference number: 2 (lower is better) Translates to: LIDDKQSSVLASLQC*LGLCLSDRLVITTT Trigger: AGTAGTTGTAATGACTAACCTATCACTGAGGCAAAGGCCAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR-3UTR CCA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTACTTCATTCCCTGTCTaGCCCTCTATAGCTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSTSFPV*PSIAYQ Trigger: TTGGTAAGCTATAGAGGGCCAGACAGGGAATGAAGT...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGGTCTGGCCTGATGTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCAGGCTGTTCTTCCCATTaGCTGAGCCCAAGGCTGACC | + |
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Preference number: 3 (lower is better) Translates to: LLVWPDVLILPKNLTGRAGCSSH*LSPRLT Trigger: GGTCAGCCTTGGGCTCAGCAAATGGGAAGAACAGCC...TGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR TCA 72 bp | CTGGCCCTCTATAGCTTACCAACTCCTGGTCTGGCCTaGTGTCTTAATTCTGCCCAAGAACCTAACTGGACG | + |
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Preference number: 3 (lower is better) Translates to: LALYSLPTPGLA*CLNSAQEPNWT Trigger: CGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR GCA 72 bp | GACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTaGTTGCTTGGCCTTTGCCTCAGTGATAGGTTAGTC | + |
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Preference number: 3 (lower is better) Translates to: DDKQSSVLASLQ*LLGLCLSDRLV Trigger: GACTAACCTATCACTGAGGCAAAGGCCAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR CCA 72 bp | CCTGTCTGGCCCTCTATAGCTTACCAACTCCTGGTCTaGCCTGATGTCTTAATTCTGCCCAAGAACCTAACT | + |
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Preference number: 3 (lower is better) Translates to: PVWPSIAYQLLV*PDVLILPKNLT Trigger: AGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| 3UTR CCA 72 bp | GAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTaGCCTCACTGCAGTGCTTGCTTGGCCTTTGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: EQNLLTTSKVQC*PHCSACLAFAS Trigger: TGAGGCAAAGGCCAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR TCA 90 bp | TTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTGACCTCTCGCTGGAGCAGTaGCCTCACCAGCCGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LLSPRLTSPSLYSSLSPDLSLEQ*PHQPSC Trigger: GCAAGACGGCTGGTGAGGTCACTGCTCCAGCGAGAG...GTCAGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCGTGGCCCAGGCCTTCTaGGTAGTAGTGTGGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PFAEPKADQPLPLLQLVPVAQAF*VVVWGQ Trigger: CTGCCCCCACACTACTACCCAGAAGGCCTGGGCCAC...GGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCCGCAGGCCAACATGCTaGTCAGCCAGGCAGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PFAEPKADQPLPLLQLVPRRPTC*SARQQP Trigger: TGGCTGCTGCCTGGCTGACCAGCATGTTGGCCTGCG...GGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCAGGAGGAGGGCTGCCTaGCAGAGAGCCTCACACTCC | + |
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Preference number: 4 (lower is better) Translates to: PFAEPKADQPLPLLQLVPRRRAA*QRASHS Trigger: GGAGTGTGAGGCTCTCTGCCAGGCAGCCCTCCTCCT...GGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR TCA 90 bp | TTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTGACCAGGAGGGGCACAGATaGGGTGAAGGCGCGGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: LLSPRLTSPSLYSSLSPDQEGHR*GEGAEN Trigger: GTTTTCCGCGCCTTCACCTCATCTGTGCCCCTCCTG...GTCAGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | CATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTAAAGGTGGGAGTCCCTaGAGCCTGCTCCCCGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HLLSPRLTSPSLYSSLSPKGGSP*SLLPVC Trigger: GCAGACGGGGAGCAGGCTCCAGGGACTCCCACCTTT...AGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTTGCTGGCCTCTCGCTaGAGCAGTGACCTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PFAEPKADQPLPLLQLVPLLASR*SSDLTS Trigger: GCTGGTGAGGTCACTGCTCCAGCGAGAGGCCAGCAA...GGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCCAGACGGTCTCTTGCTaGCCTCTCGCTGGAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PFAEPKADQPLPLLQLVPQTVSC*PLAGAV Trigger: CACTGCTCCAGCGAGAGGCCAGCAAGAGACCGTCTG...GGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR GCA 90 bp | CATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTCGAGAACTGGGAGTCTaGTCCTCAAGGTACTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: HLLSPRLTSPSLYSSLSPRELGV*SSRYWR Trigger: GCGCCAGTACCTTGAGGAGCAGACTCCCAGTTCTCG...AGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | CATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTCCATCAGGGAGCCATTaGCACCACGCTCTACACTGG | + |
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Preference number: 4 (lower is better) Translates to: HLLSPRLTSPSLYSSLSPPSGSH*HHALHW Trigger: CCAGTGTAGAGCGTGGTGGCAATGGCTCCCTGATGG...AGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | CATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTAGAGTGGCTGCTGACTaGTGCAAGAGCCAGGCGATC | + |
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Preference number: 4 (lower is better) Translates to: HLLSPRLTSPSLYSSLSPRVAAD*CKSQAI Trigger: GATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCT...AGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR CCA 90 bp | ACTTCATTCCCTGTCTGGCCCTCTATAGCTTACCAACTCCTGGTCTGGCCTGATACAGCGGGCCGGGCTTaGGCGCGAAGCGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TSFPVWPSIAYQLLVWPDTAGRA*ARSAAA Trigger: TGCTGCTGCGCTTCGCGCCCAAGCCCGGCCCGCTGT...ATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAGACAGGGAATGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | CCATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCGATGATGTTAGGGTGTaGGGCAAGCTGCTTGGGACC | + |
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Preference number: 4 (lower is better) Translates to: PFAEPKADQPLPLLQLVPDDVRV*GKLLGT Trigger: GGTCCCAAGCAGCTTGCCCCACACCCTAACATCATC...GGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR TCA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCCTCTCGCTGGAGCAGTaGCCTCACCAGCCGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAHPAKPPSSAFVYCHDILSLEQ*PHQPSC Trigger: GCAAGACGGCTGGTGAGGTCACTGCTCCAGCGAGAG...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR TCA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCCAGCAGAGTGGCTGCTaGCTGCTGCAAGAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PAHPAKPPSSAFVYCHDIQQSGC*LLQEPG Trigger: GCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTG...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR GCA 90 bp | CTCCTGGTCTGGCCTGATGTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCAGGAGTCCCTGGAGCCTaGTCCCCGTCTGCTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLVWPDVLILPKNLTGRAGVPGA*SPSAPF Trigger: GAAGGGAGCAGACGGGGAGCAGGCTCCAGGGACTCC...TGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | CTGAGCTGTTCAAGGCTGTTCTTCCCATTTGCTGAGCCCAAGGCTGACCAGCCCGGCCAGAATGGGCTGTaGACACCTCAGGGGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LSCSRLFFPFAEPKADQPGQNGL*TPQGPS Trigger: TGATGGCCCCTGAGGTGTCCACAGCCCATTCTGGCC...GGGCTGGTCAGCCTTGGGCTCAGCAAATGGGAAGAACAGCCTTGAACAGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | TTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTGACAGATTTCATAGGCGATaGCCCCCACAGCCCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LLSPRLTSPSLYSSLSPDRFHRR*PPQPRY Trigger: ATACCTGGGCTGTGGGGGCCATCGCCTATGAAATCT...GTCAGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR GCA 90 bp | CATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTCGGCATTGCAACCCTTaGCAATGGCTTGCCCTATCA | + |
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Preference number: 4 (lower is better) Translates to: HLLSPRLTSPSLYSSLSPRHCNP*QWLALS Trigger: TGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCG...AGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCAGCCGCAGGCCAACATaGTGGTCAGCCAGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VLILPKNLTGRAQVVPLSSRRPT*WSARQQ Trigger: CTGCTGCCTGGCTGACCAGCATGTTGGCCTGCGGCT...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCGGGGCAGCGTGGGCATaGTGGCTTCATACACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VLILPKNLTGRAQVVPLSGAAWA*WLHTQR Trigger: CCGCTGTGTATGAAGCCACCATGCCCACGCTGCCCC...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | CATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTAGATTTCATAGGCGATaGCCCCCACAGCCCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: HLLSPRLTSPSLYSSLSPRFHRR*PPQPRY Trigger: ATACCTGGGCTGTGGGGGCCATCGCCTATGAAATCT...AGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCTTGCTGGCCTCTCGCTaGAGCAGTGACCTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAHPAKPPSSAFVYCHDILLASR*SSDLTS Trigger: GCTGGTGAGGTCACTGCTCCAGCGAGAGGCCAGCAA...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR GCA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTAGCGCCCGACCCAGCTaGAGGCCTCGGCCCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSSARPS*RPRPSA Trigger: GGCACTGGGCCGAGGCCTGCAGCTGGGTCGGGCGCT...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | CTCCTGGTCTGGCCTGATGTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCATTGGCCTTTTCCAGGTaGTGGGGCAGCGTGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: LLVWPDVLILPKNLTGRALAFSR*WGSVGM Trigger: CATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAA...TGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCAGCCTGCTCCCCGTCTaGTCCCTTCAGGACGACATC | + |
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Preference number: 4 (lower is better) Translates to: VLILPKNLTGRAQVVPLSSLLPV*SLQDDI Trigger: GATGTCGTCCTGAAGGGAGCAGACGGGGAGCAGGCT...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR CCA 90 bp | ACTTCATTCCCTGTCTGGCCCTCTATAGCTTACCAACTCCTGGTCTGGCCTGATACCATGAACTGCCTCTaGATCCGCGCCGCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TSFPVWPSIAYQLLVWPDTMNCL*IRAASP Trigger: TGGGCTGGCGGCGCGGATCCAGAGGCAGTTCATGGT...ATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAGACAGGGAATGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCGGGTGTGGGGCAAGCTaGTTGGGACCATCTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: VLILPKNLTGRAQVVPLSGCGAS*LGPSLD Trigger: ATCCAGAGATGGTCCCAAGCAGCTTGCCCCACACCC...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | CTCCTGGTCTGGCCTGATGTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCAGTGGCTGCTGACTGCTaGAAGAGCCAGGCGATCATC | + |
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Preference number: 4 (lower is better) Translates to: LLVWPDVLILPKNLTGRAVAADC*KSQAII Trigger: GATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCAC...TGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
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| CDS-3UTR CCA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCGCAGCGTGGGCATGGTaGCTTCATACACAGCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VLILPKNLTGRAQVVPLSAAWAW*LHTQRH Trigger: ATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGC...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | AACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGCAAAGCCACGCGGCTTaGCGGGACCAGCTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NLLTTSKVQCWPHCSACLQSHAA*RDQLLA Trigger: AGCCAGGAGCTGGTCCCGGCAAGCCGCGTGGCTTTG...CAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
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| CDS-3UTR GCA 90 bp | CTCCTGGTCTGGCCTGATGTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCATCTCGAGGTGGGCACTaGCTTGGCCATAGAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVWPDVLILPKNLTGRASRGGH*LGHRRD Trigger: ATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGA...TGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTGTTCAAGGCTGTTCTTCCCATTTGCTGAGCCCAAGGCTGACCAGCCCCCCCAGAGGCTTAAGTaGAGCACATTTGCAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCSRLFFPFAEPKADQPPQRLK*STFAAK Trigger: CTTAGCTGCAAATGTGCTGCACTTAAGCCTCTGGGG...GGGCTGGTCAGCCTTGGGCTCAGCAAATGGGAAGAACAGCCTTGAACAGCTCAG 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCTTCAGGGCTAGAAGATaGTCGCCCCAGAGGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAHPAKPPSSAFVYCHDIFRARR*SPQRLK Trigger: CTTAAGCCTCTGGGGCGAGCATCTTCTAGCCCTGAA...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCATTCCCTGTCTGGCCCTCTATAGCTTACCAACTCCTGGTCTGGCCTGATGTGGCTGCTGACTGCTaGAAGAGCCAGGCGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSFPVWPSIAYQLLVWPDVAADC*KSQAII Trigger: GATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCAC...ATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAGACAGGGAATGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTGTTCAAGGCTGTTCTTCCCATTTGCTGAGCCCAAGGCTGACCAGCCCTTAAGATGGCTTCGCTaGAGGAACCTGCCGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSRLFFPFAEPKADQPLRWLR*RNLPRY Trigger: ATATCTCGGCAGGTTCCTCCAGCGAAGCCATCTTAA...GGGCTGGTCAGCCTTGGGCTCAGCAAATGGGAAGAACAGCCTTGAACAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CCA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCGCCGGGACCAGCTCCTaGCTCATTTTGCTTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLILPKNLTGRAQVVPLSAGTSS*LILLKM Trigger: CATCTTAAGCAAAATGAGCCAGGAGCTGGTCCCGGC...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR TCA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTTGGGCAATGCCCTGCTaGACCAGATGGTCCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSWAMPC*TRWSTP Trigger: GGGCGTGGACCATCTGGTTCAGCAGGGCATTGCCCA...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGTCTGGCCTGATGTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCAGCTCCTGGCTCATTTTaGTTAAGATGGCTTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVWPDVLILPKNLTGRAAPGSF*LRWLRW Trigger: CCAGCGAAGCCATCTTAAGCAAAATGAGCCAGGAGC...TGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGACATCAGGCCAGACCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR GCA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTCCTCACCAGCCGTCTTaGCTCTGGAGGCACCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSPHQPS*LWRHRL Trigger: GAGTCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGG...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCCCCCAGAGGCTTAAGTaGAGCACATTTGCAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLILPKNLTGRAQVVPLSPQRLK*STFAAK Trigger: CTTAGCTGCAAATGTGCTGCACTTAAGCCTCTGGGG...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCAGGACACTTCAGGGCTAGAAGATaGTCGCCCCAGAGGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQPSHLLQPSYTVMTSGHFRARR*SPQRLK Trigger: CTTAAGCCTCTGGGGCGAGCATCTTCTAGCCCTGAA...GTGTCCTGATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTGTTCAAGGCTGTTCTTCCCATTTGCTGAGCCCAAGGCTGACCAGCCCGGCCATAGAAGGGATTaGCAAGCCCAAAGATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCSRLFFPFAEPKADQPGHRRD*QAQRFH Trigger: ATGAAATCTTTGGGCTTGCCAATCCCTTCTATGGCC...GGGCTGGTCAGCCTTGGGCTCAGCAAATGGGAAGAACAGCCTTGAACAGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CCA 90 bp | AACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGCAGACGGTCTCTTGCTaGCCTCTCGCTGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLLTTSKVQCWPHCSACLQTVSC*PLAGAV Trigger: CACTGCTCCAGCGAGAGGCCAGCAAGAGACCGTCTG...CAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCTGCAACCCTTGCCAATaGCTTGCCCTATCAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAHPAKPPSSAFVYCHDICNPCQ*LALSDN Trigger: ATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCA...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CCA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGGTGCTGGGGCAGCGTaGGCATGGTGGCTTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSGAGAA*AWWLHT Trigger: TGTATGAAGCCACCATGCCCACGCTGCCCCAGCACC...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCTCATTTTGCTTAAGATaGCTTCGCTGGAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAHPAKPPSSAFVYCHDISFCLR*LRWRNL Trigger: CAGGTTCCTCCAGCGAAGCCATCTTAAGCAAAATGA...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR GCA 90 bp | AACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGTCTCGAGGTGGGCACTaGCTTGGCCATAGAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLLTTSKVQCWPHCSACLSRGGH*LGHRRD Trigger: ATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGA...CAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTTGGCAAAGGGAAAGGTaGGAGTCCCTGGAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSWQRER*ESLEPA Trigger: AGCAGGCTCCAGGGACTCCCACCTTTCCCTTTGCCA...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR TCA 90 bp | GAGTTAGACATAAAGAATGCATTTAGCCCAGGAATTGGTAAATTTGACTATGAGCAGCAGAGTGGCTGCTaGCTGCTGCAAGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELDIKNAFSPGIGKFDYEQQSGC*LLQEPG Trigger: GCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTG...CTCATAGTCAAATTTACCAATTCCTGGGCTAAATGCATTCTTTATGTCTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTAGACATAAAGAATGCATTTAGCCCAGGAATTGGTAAATTTGACTATGAGCCTCACCAGCCGTCTTaGCTCTGGAGGCACCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ELDIKNAFSPGIGKFDYEPHQPS*LWRHRL Trigger: GAGTCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGG...CTCATAGTCAAATTTACCAATTCCTGGGCTAAATGCATTCTTTATGTCTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTAGACATAAAGAATGCATTTAGCCCAGGAATTGGTAAATTTGACTATGAGAGGAGGAGGGCTGCCTaGCAGAGAGCCTCACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELDIKNAFSPGIGKFDYERRRAA*QRASHS Trigger: GGAGTGTGAGGCTCTCTGCCAGGCAGCCCTCCTCCT...CTCATAGTCAAATTTACCAATTCCTGGGCTAAATGCATTCTTTATGTCTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CCA 90 bp | AACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGGGCCATAGAAGGGATTaGCAAGCCCAAAGATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLLTTSKVQCWPHCSACLGHRRD*QAQRFH Trigger: ATGAAATCTTTGGGCTTGCCAATCCCTTCTATGGCC...CAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTAGACATAAAGAATGCATTTAGCCCAGGAATTGGTAAATTTGACTATGAGAGAGTGGCTGCTGACTaGTGCAAGAGCCAGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: ELDIKNAFSPGIGKFDYERVAAD*CKSQAI Trigger: GATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCT...CTCATAGTCAAATTTACCAATTCCTGGGCTAAATGCATTCTTTATGTCTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTAGACATAAAGAATGCATTTAGCCCAGGAATTGGTAAATTTGACTATGAGTATTCCACATCATCTTaGTGGCAAAGGGAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELDIKNAFSPGIGKFDYEYSTSS*WQRERW Trigger: CCACCTTTCCCTTTGCCATCAAGATGATGTGGAATA...CTCATAGTCAAATTTACCAATTCCTGGGCTAAATGCATTCTTTATGTCTAACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS CCA 90 bp | CCGCCGCGGGGCCGGGCTTCCCCCAGCCGAACAGCGGGCCGGGCTTaGGCGCGAAGCGCAGCAGCAGCGCCCGACCCAGCTGCAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPRGRASPSRTAGRA*ARSAAAAPDPAAGL Trigger: GAGGCCTGCAGCTGGGTCGGGCGCTGCTGCTGCGCTTCGCGCCCAAGCCCGGCCCGCTGTTCGGCTGGGGGAAGCCCGGCCCCGCGGCGG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS CCA 90 bp | GAGCCCGACCGGCCGAGGCTGTGCTCCGGGGCTTACGACCTGGCCTaGGCGCTCCAGCTGCAGGCCTCGGCCCAGTGCCTGTCGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: EPDRPRLCSGAYDLA*ALQLQASAQCLSHR Trigger: GCGGTGCGACAGGCACTGGGCCGAGGCCTGCAGCTGGAGCGCCCAGGCCAGGTCGTAAGCCCCGGAGCACAGCCTCGGCCGGTCGGGCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | GAGGAACAGTGTGCGACCGTGGCCCAGGCCTTCTGGGTAGTAGTGTaGGGGCAGCATATCAGGATAGTCAGCCAGGGCCCCCGGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EEQCATVAQAFWVVV*GQHIRIVSQGPRQE Trigger: CTCCTGCCGGGGGCCCTGGCTGACTATCCTGATATGCTGCCCCCACACTACTACCCAGAAGGCCTGGGCCACGGTCGCACACTGTTCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | TTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTGACCGTGCAGACGGTCTCTaGCTGGCCTCTCGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSPRLTSPSLYSSLSPDRADGL*LASRWS Trigger: GCTCCAGCGAGAGGCCAGCAAGAGACCGTCTGCACG...GTCAGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS TCA 90 bp | GGGCCATCAGGGAGCCATTGCCACCACGCTCTACACTGGAGCTGTTaGAAGGCAGCCGCAGGCCAACATGCTGGTCAGCCAGGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPSGSHCHHALHWSC*KAAAGQHAGQPGSS Trigger: GCTGCTGCCTGGCTGACCAGCATGTTGGCCTGCGGCTGCCTTTCAACAGCTCCAGTGTAGAGCGTGGTGGCAATGGCTCCCTGATGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTGTTCAAGGCTGTTCTTCCCATTTGCTGAGCCCAAGGCTGACCAGCCCCCAAAGCCACGCGGCTaGCCGGGACCAGCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSCSRLFFPFAEPKADQPPKPRG*PGPAPG Trigger: GCCAGGAGCTGGTCCCGGCAAGCCGCGTGGCTTTGG...GGGCTGGTCAGCCTTGGGCTCAGCAAATGGGAAGAACAGCCTTGAACAGCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS GCA 90 bp | GAGGCACCGACTCAGGCATCTCAGGCAGCTGAGCTTCCTGGTAGCTaGGGCTCTCGAGGTGGGCACTGCCTTGGCCATAGAAGGGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: EAPTQASQAAELPGS*GSRGGHCLGHRRDW Trigger: CCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGAGCCGCAGCTACCAGGAAGCTCAGCTGCCTGAGATGCCTGAGTCGGTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | CCCCCACAGCCCAGGTATCGGCTTTGCTGTAGTCAATTACCGCACTaGGGCCAGAATGGGCTGTGGACACCTCAGGGGCCATCAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPQPRYRLCCSQLPH*GQNGLWTPQGPSGS Trigger: GCTCCCTGATGGCCCCTGAGGTGTCCACAGCCCATTCTGGCCCCAGTGCGGTAATTGACTACAGCAAAGCCGATACCTGGGCTGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | TTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTGACGAGGTGGGCACTGCCTaGGCCATAGAAGGGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSPRLTSPSLYSSLSPDEVGTA*AIEGIG Trigger: GCCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTC...GTCAGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CAA 90 bp | CATTTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTACCTCACCAGCCGTCTaGCCTCTGGAGGCACCGACT | + |
|
Preference number: 5 (lower is better) Translates to: HLLSPRLTSPSLYSSLSPTSPAV*PLEAPT Trigger: AGTCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGGT...AGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS CCA 90 bp | AGCTGCGGCTCTCGAGGTGGGCACTGCCTTGGCCATAGAAGGGATTaGCAAGCCCAAAGATTTCATAGGCGATGGCCCCCACAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCGSRGGHCLGHRRD*QAQRFHRRWPPQPR Trigger: CCTGGGCTGTGGGGGCCATCGCCTATGAAATCTTTGGGCTTGCCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGAGCCGCAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | ACATTTGCAGCTAAGCGTGCAGACGGTCTCTTGCTGGCCTCTCGCTaGAGCAGTGACCTCACCAGCCGTCTTGCCTCTGGAGGCACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: TFAAKRADGLLLASR*SSDLTSRLASGGTD Trigger: GTCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGGTCACTGCTCCAGCGAGAGGCCAGCAAGAGACCGTCTGCACGCTTAGCTGCAAATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCATTCCCTGTCTGGCCCTCTATAGCTTACCAACTCCTGGTCTGGCCTGATAACAGCGGGCCGGGCTaGGGCGCGAAGCGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSFPVWPSIAYQLLVWPDNSGPG*GAKRSS Trigger: GCTGCTGCGCTTCGCGCCCAAGCCCGGCCCGCTGTT...ATCAGGCCAGACCAGGAGTTGGTAAGCTATAGAGGGCCAGACAGGGAATGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS GCA 90 bp | AGTGTCCAGTGGGTCAGACACGCGCTTGGTTTTCTGTGTAAAAATTaGCTGGATCTCCTGACAGGCCGAGGCGGCCCTCCGGCCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVQWVRHALGFLCKN*LDLLTGRGGPPAFR Trigger: GCGGAAGGCCGGAGGGCCGCCTCGGCCTGTCAGGAGATCCAGGCAATTTTTACACAGAAAACCAAGCGCGTGTCTGACCCACTGGACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | CCATACTCTCCAGCCAAAGCCACGCGGCTTGCCGGGACCAGCTCCTaGCTCATTTTGCTTAAGATGGCTTCGCTGGAGGAACCTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PYSPAKATRLAGTSS*LILLKMASLEEPAE Trigger: CTCGGCAGGTTCCTCCAGCGAAGCCATCTTAAGCAAAATGAGCCAGGAGCTGGTCCCGGCAAGCCGCGTGGCTTTGGCTGGAGAGTATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | CGGCTTTGCTGTAGTCAATTACCGCACTGGGGCCAGAATGGGCTGTaGACACCTCAGGGGCCATCAGGGAGCCATTGCCACCACGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RLCCSQLPHWGQNGL*TPQGPSGSHCHHAL Trigger: TAGAGCGTGGTGGCAATGGCTCCCTGATGGCCCCTGAGGTGTCCACAGCCCATTCTGGCCCCAGTGCGGTAATTGACTACAGCAAAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | TTGCTGAGCCCAAGGCTGACCAGCCCCTCCCTCTACTCCAGCTTGTCCCCTGACTGTGGGGCAAGCTGCTaGGGACCATCTCTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLSPRLTSPSLYSSLSPDCGASC*GPSLDL Trigger: AAGATCCAGAGATGGTCCCAAGCAGCTTGCCCCACA...GTCAGGGGACAAGCTGGAGTAGAGGGAGGGGCTGGTCAGCCTTGGGCTCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS GCA 90 bp | TCCGGGCCCTTTCCTATAAGGCCAAGGTGTTTGGCCTTTTCCAGGTaGTGGGGCAGCGTGGGCATGGTGGCTTCATACACAGCGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPFPIRPRCLAFSR*WGSVGMVASYTAAL Trigger: CAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAAACACCTTGGCCTTATAGGAAAGGGCCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS GCA 90 bp | CCACGCTCTACACTGGAGCTGTTGAAAGGCAGCCGCAGGCCAACATaGTGGTCAGCCAGGCAGCAGCCAAAGTCTGAGATCACTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRSTLELLKGSRRPT*WSARQQPKSEITSQ Trigger: CTGGCTAGTGATCTCAGACTTTGGCTGCTGCCTGGCTGACCAGCATGTTGGCCTGCGGCTGCCTTTCAACAGCTCCAGTGTAGAGCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | CAAGGTGTTTGGCCTTTTCCAGGTGCTGGGGCAGCGTGGGCATGGTaGCTTCATACACAGCGGCATTGCAACCCTTGCCAATGGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGVWPFPGAGAAWAW*LHTQRHCNPCQWLA Trigger: GGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAAACACCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | GGCCAAGGTGTTTGGCCTTTTCCAGGTGCTGGGGCAGCGTGGGCATaGTGGCTTCATACACAGCGGCATTGCAACCCTTGCCAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQGVWPFPGAGAAWA*WLHTQRHCNPCQWL Trigger: AAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAAACACCTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | CGCTCTACACTGGAGCTGTTGAAAGGCAGCCGCAGGCCAACATGCTaGTCAGCCAGGCAGCAGCCAAAGTCTGAGATCACTAGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSTLELLKGSRRPTC*SARQQPKSEITSQG Trigger: TCCCTGGCTAGTGATCTCAGACTTTGGCTGCTGCCTGGCTGACCAGCATGTTGGCCTGCGGCTGCCTTTCAACAGCTCCAGTGTAGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS TCA 90 bp | AGGGACAGCCATCTGAGTCCCACTCCACAAGGATGTTGTCGGACTTaGGATCCCGATGGGCAATGCCCTGCTGAACCAGATGGTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: RDSHLSPTPQGCCRT*DPDGQCPAEPDGPR Trigger: GCGTGGACCATCTGGTTCAGCAGGGCATTGCCCATCGGGATCTCAAGTCCGACAACATCCTTGTGGAGTGGGACTCAGATGGCTGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS GCA 90 bp | GGTGCTGGGGCAGCGTGGGCATGGTGGCTTCATACACAGCGGCATTaGAACCCTTGCCAATGGCTTGCCCTATCAGATAATCCTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GAGAAWAWWLHTQRH*NPCQWLALSDNPPD Trigger: GTCTGGAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGCCCCAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS GCA 90 bp | CAGGCAGCTGAGCTTCCTGGTAGCTGCGGCTCTCGAGGTGGGCACTaGCTTGGCCATAGAAGGGATTGGCAAGCCCAAAGATTTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: QAAELPGSCGSRGGH*LGHRRDWQAQRFHR Trigger: CCTATGAAATCTTTGGGCTTGCCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGAGCCGCAGCTACCAGGAAGCTCAGCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | GGGCCCTTTCCTATAAGGCCAAGGTGTTTGGCCTTTTCCAGGTGCTaGGGCAGCGTGGGCATGGTGGCTTCATACACAGCGGCATTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPFPIRPRCLAFSRC*GSVGMVASYTAALQ Trigger: TTGCAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAAACACCTTGGCCTTATAGGAAAGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTGTTCAAGGCTGTTCTTCCCATTTGCTGAGCCCAAGGCTGACCAGCCCTCTACACTGGAGCTGTaGAAAGGCAGCCGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSCSRLFFPFAEPKADQPSTLEL*KGSRRP Trigger: TGGCCTGCGGCTGCCTTTCAACAGCTCCAGTGTAGA...GGGCTGGTCAGCCTTGGGCTCAGCAAATGGGAAGAACAGCCTTGAACAGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS GCA 90 bp | GCAGCGTGGGCATGGTGGCTTCATACACAGCGGCATTGCAACCCTTaGCAATGGCTTGCCCTATCAGATAATCCTCCAGACGGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAWAWWLHTQRHCNP*QWLALSDNPPDGSP Trigger: AGGGCTTCCGTCTGGAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | TGGGCATGGTGGCTTCATACACAGCGGCATTGCAACCCTTGCCAATaGCTTGCCCTATCAGATAATCCTCCAGACGGAAGCCCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WAWWLHTQRHCNPCQ*LALSDNPPDGSPAS Trigger: GCTGGCAGGGCTTCCGTCTGGAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | GTCTTAATTCTGCCCAAGAACCTAACTGGACGGGCACAGGTAGTGCCTCTCTCCGAGGTGGGCACTGCCTaGGCCATAGAAGGGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLILPKNLTGRAQVVPLSEVGTA*AIEGIG Trigger: GCCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTC...GGAGAGAGGCACTACCTGTGCCCGTCCAGTTAGGTTCTTGGGCAGAATTAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS TCA 90 bp | ACAAGGATGTTGTCGGACTTGAGATCCCGATGGGCAATGCCCTGCTaGACCAGATGGTCCACGCCCTCCAGCAACTGCAAGGTCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: TRMLSDLRSRWAMPC*TRWSTPSSNCKVIM Trigger: CATGATGACCTTGCAGTTGCTGGAGGGCGTGGACCATCTGGTTCAGCAGGGCATTGCCCATCGGGATCTCAAGTCCGACAACATCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS TCA 90 bp | CACGCAGCTCTTCTCTCTCAGCCTGTCAGCCAGCAGAGTGGCTGCTaGCTGCTGCAAGAGCCAGGCGATCATCTTGTCCAATTTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HAALLSQPVSQQSGC*LLQEPGDHLVQFQV Trigger: AACCTGAAATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGCTGACAGGCTGAGAGAGAAGAGCTGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS GCA 90 bp | CAAAGATTTCATAGGCGATGGCCCCCACAGCCCAGGTATCGGCTTTaGTGTAGTCAATTACCGCACTGGGGCCAGAATGGGCTGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QRFHRRWPPQPRYRL*CSQLPHWGQNGLWT Trigger: TGTCCACAGCCCATTCTGGCCCCAGTGCGGTAATTGACTACAGCAAAGCCGATACCTGGGCTGTGGGGGCCATCGCCTATGAAATCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS GCA 90 bp | TTCAGGTTCTTCAGGGCTAGAAGATGCTCGCCCCAGAGGCTTAAGTaGAGCACATTTGCAGCTAAGCGTGCAGACGGTCTCTTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRFFRARRCSPQRLK*STFAAKRADGLLLA Trigger: GGCCAGCAAGAGACCGTCTGCACGCTTAGCTGCAAATGTGCTGCACTTAAGCCTCTGGGGCGAGCATCTTCTAGCCCTGAAGAACCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | TTGTCTCCACGCAGCTCTTCTCTCTCAGCCTGTCAGCCAGCAGAGTaGCTGCTGACTGCTGCAAGAGCCAGGCGATCATCTTGTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LSPRSSSLSACQPAE*LLTAARARRSSCPI Trigger: AATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGCTGACAGGCTGAGAGAGAAGAGCTGCGTGGAGACAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS GCA 90 bp | CTCTTCTCTCTCAGCCTGTCAGCCAGCAGAGTGGCTGCTGACTGCTaGAAGAGCCAGGCGATCATCTTGTCCAATTTCAGGTTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFSLSLSASRVAADC*KSQAIILSNFRFFR Trigger: CCTGAAGAACCTGAAATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGCTGACAGGCTGAGAGAGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS GCA 90 bp | CAGCTCTTCTCTCTCAGCCTGTCAGCCAGCAGAGTGGCTGCTGACTaGTGCAAGAGCCAGGCGATCATCTTGTCCAATTTCAGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLFSLSLSASRVAAD*CKSQAIILSNFRFF Trigger: GAAGAACCTGAAATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGCTGACAGGCTGAGAGAGAAGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCTCATACACAGCGGCATaGCAACCCTTGCCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAHPAKPPSSAFVYCHDISYTAA*QPLPMA Trigger: AGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGA...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCCACTCCACAAGGATGTaGTCGGACTTGAGATCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PAHPAKPPSSAFVYCHDIHSTRM*SDLRSR Trigger: TCGGGATCTCAAGTCCGACAACATCCTTGTGGAGTG...GATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGTGGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CAA 90 bp | AACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGCGTGCAGACGGTCTCTaGCTGGCCTCTCGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLLTTSKVQCWPHCSACLRADGL*LASRWS Trigger: GCTCCAGCGAGAGGCCAGCAAGAGACCGTCTGCACG...CAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS CCA 90 bp | CTTGGCCATAGAAGGGATTGGCAAGCCCAAAGATTTCATAGGCGATaGCCCCCACAGCCCAGGTATCGGCTTTGCTGTAGTCAATTACCG | + |
|
Preference number: 5 (lower is better) Translates to: LGHRRDWQAQRFHRR*PPQPRYRLCCSQLP Trigger: CGGTAATTGACTACAGCAAAGCCGATACCTGGGCTGTGGGGGCCATCGCCTATGAAATCTTTGGGCTTGCCAATCCCTTCTATGGCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS CCA 90 bp | CAGATAATCCTCCAGACGGAAGCCCTGCCAGCATCGAGTGTCCAGTaGGTCAGACACGCGCTTGGTTTTCTGTGTAAAAATTGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QIILQTEALPASSVQ*VRHALGFLCKNCLD Trigger: ATCCAGGCAATTTTTACACAGAAAACCAAGCGCGTGTCTGACCCACTGGACACTCGATGCTGGCAGGGCTTCCGTCTGGAGGATTATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCAGGACACACAGCATCTGCAGCTTaGTCTCCACGCAGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TQPSHLLQPSYTVMTSGHTASAA*SPRSSS Trigger: AGAAGAGCTGCGTGGAGACAAAGCTGCAGATGCTGT...GTGTCCTGATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS GCA 90 bp | CAGGCGATCATCTTGTCCAATTTCAGGTTCTTCAGGGCTAGAAGATaGTCGCCCCAGAGGCTTAAGTGCAGCACATTTGCAGCTAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QAIILSNFRFFRARR*SPQRLKCSTFAAKR Trigger: ACGCTTAGCTGCAAATGTGCTGCACTTAAGCCTCTGGGGCGAGCATCTTCTAGCCCTGAAGAACCTGAAATTGGACAAGATGATCGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS-3UTR CAA 90 bp | ACCCAGCCAAGCCACCTTCTTCAGCCTTCGTATACTGTCATGACATCAGGACACGGGTCAGACACGCGCTaGGTTTTCTGTGTAAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: TQPSHLLQPSYTVMTSGHGSDTR*VFCVKI Trigger: AATTTTTACACAGAAAACCAAGCGCGTGTCTGACCC...GTGTCCTGATGTCATGACAGTATACGAAGGCTGAAGAAGGTGGCTTGGCTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CAA 90 bp | AACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTGCTTGCTTGAGCTCCTGGCTCATTTaGCTTAAGATGGCTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLLTTSKVQCWPHCSACLSSWLI*LKMASL Trigger: CAGCGAAGCCATCTTAAGCAAAATGAGCCAGGAGCT...CAAGCAAGCACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CAA 90 bp | AATGAGCAGAACTTATTGACGACAAGCAAAGTTCAGTGTTGGCCTCACTGCAGTACCCTTGCCAATGGCTaGCCCTATCAGATAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NEQNLLTTSKVQCWPHCSTLANG*PYQIIL Trigger: GAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGT...ACTGCAGTGAGGCCAACACTGAACTTTGCTTGTCGTCAATAAGTTCTGCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS-3UTR CAA 90 bp | GAGTTAGACATAAAGAATGCATTTAGCCCAGGAATTGGTAAATTTGACTATGAGACCTCACCAGCCGTCTaGCCTCTGGAGGCACCGACT | + |
|
Preference number: 5 (lower is better) Translates to: ELDIKNAFSPGIGKFDYETSPAV*PLEAPT Trigger: AGTCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGGT...CTCATAGTCAAATTTACCAATTCCTGGGCTAAATGCATTCTTTATGTCTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS-3UTR CAA 90 bp | GAGTTAGACATAAAGAATGCATTTAGCCCAGGAATTGGTAAATTTGACTATGAGACAGCATCTGCAGCTTaGTCTCCACGCAGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELDIKNAFSPGIGKFDYETASAA*SPRSSS Trigger: AGAAGAGCTGCGTGGAGACAAAGCTGCAGATGCTGT...CTCATAGTCAAATTTACCAATTCCTGGGCTAAATGCATTCTTTATGTCTAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 |
||
| CDS CAA 90 bp | GCCGCCGCGGGGCCGGGCTTCCCCCAGCCGAACAGCGGGCCGGGCTaGGGCGCGAAGCGCAGCAGCAGCGCCCGACCCAGCTGCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAAGPGFPQPNSGPG*GAKRSSSARPSCRP Trigger: AGGCCTGCAGCTGGGTCGGGCGCTGCTGCTGCGCTTCGCGCCCAAGCCCGGCCCGCTGTTCGGCTGGGGGAAGCCCGGCCCCGCGGCGGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS CAA 72 bp | GGGCCGGGCTTCCCCCAGCCGAACAGCGGGCCGGGCTaGGGCGCGAAGCGCAGCAGCAGCGCCCGACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPGFPQPNSGPG*GAKRSSSARPS Trigger: GCTGGGTCGGGCGCTGCTGCTGCGCTTCGCGCCCAAGCCCGGCCCGCTGTTCGGCTGGGGGAAGCCCGGCCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS GCA 72 bp | GCGGTCCGGGAGGGGGAGCCCGACCGGCCGAGGCTGTaGTCCGGGGCTTACGACCTGGCCTGGGCGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVREGEPDRPRL*SGAYDLAWALS Trigger: GGAGAGCGCCCAGGCCAGGTCGTAAGCCCCGGAGCACAGCCTCGGCCGGTCGGGCTCCCCCTCCCGGACCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS GCA 72 bp | GCGGTCCGGGAGGGGGAGCCCGACCGGCCGAGGCTGTaGTCCGGGGCTTACGACCTGGCCTGGGCGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVREGEPDRPRL*SGAYDLAWALQ Trigger: CTGGAGCGCCCAGGCCAGGTCGTAAGCCCCGGAGCACAGCCTCGGCCGGTCGGGCTCCCCCTCCCGGACCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105817.4 |
||
| CDS CCA 72 bp | GGCCGGGCTTCCCCCAGCCGAACAGCGGGCCGGGCTTaGGCGCGAAGCGCAGCAGCAGCGCCCGACCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRASPSRTAGRA*ARSAAAAPDPA Trigger: AGCTGGGTCGGGCGCTGCTGCTGCGCTTCGCGCCCAAGCCCGGCCCGCTGTTCGGCTGGGGGAAGCCCGGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030536.13 |
||
| CDS CCA 72 bp | CCTGCGCCGCCCCGGGCCCGCACCATGAACTGCCTCTaGATCCGCGCCGCCAGCCCAGCTACCGACTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAPPRARTMNCL*IRAASPATDWR Trigger: CCGCCAGTCGGTAGCTGGGCTGGCGGCGCGGATCCAGAGGCAGTTCATGGTGCGGGCCCGGGGCGGCGCAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 72 bp | CCGACCGGCCGAGGCTGTGCTCCGGGGCTTACGACCTaGCCTGGGCGCTCCAGCTGCAGGCCTCGGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PTGRGCAPGLTT*PGRSSCRPRPS Trigger: ACTGGGCCGAGGCCTGCAGCTGGAGCGCCCAGGCCAGGTCGTAAGCCCCGGAGCACAGCCTCGGCCGGTCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105817.4 |
||
| CDS TCA 72 bp | TGCAGACGGTCTCTTGCTGGCCTCTCGCTGGAGCAGTaGCCTCACCAGCCGTCTTGCCTCTGGAGGCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: CRRSLAGLSLEQ*PHQPSCLWRHR Trigger: TCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGGTCACTGCTCCAGCGAGAGGCCAGCAAGAGACCGTCTGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS GCA 72 bp | GGGAAAGGTGGGAGTCCCTGGAGCCTGCTCCCCGTCTaGTCCCTTCAGGACGACATCCGGGCCCTTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GKGGSPWSLLPV*SLQDDIRALSY Trigger: ATAGGAAAGGGCCCGGATGTCGTCCTGAAGGGAGCAGACGGGGAGCAGGCTCCAGGGACTCCCACCTTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 72 bp | TGTGCGACCGTGGCCCAGGCCTTCTGGGTAGTAGTGTaGGGGCAGCATATCAGGATAGTCAGCCAGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CATVAQAFWVVV*GQHIRIVSQGP Trigger: GGGGCCCTGGCTGACTATCCTGATATGCTGCCCCCACACTACTACCCAGAAGGCCTGGGCCACGGTCGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CAA 72 bp | TGGCCTCTCGCTGGAGCAGTGACCTCACCAGCCGTCTaGCCTCTGGAGGCACCGACTCAGGCATCTCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WPLAGAVTSPAV*PLEAPTQASQA Trigger: TGCCTGAGATGCCTGAGTCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGGTCACTGCTCCAGCGAGAGGCCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS CAA 90 bp | GGGGCCATCAGGGAGCCATTGCCACCACGCTCTACACTGGAGCTGTaGAAAGGCAGCCGCAGGCCAACATGCTGGTCAGCCAGGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GAIREPLPPRSTLEL*KGSRRPTCWSARQQ Trigger: CTGCTGCCTGGCTGACCAGCATGTTGGCCTGCGGCTGCCTTTCAACAGCTCCAGTGTAGAGCGTGGTGGCAATGGCTCCCTGATGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CAA 90 bp | GGGCCAGAATGGGCTGTGGACACCTCAGGGGCCATCAGGGAGCCATaGCCACCACGCTCTACACTGGAGCTGTTGAAAGGCAGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPEWAVDTSGAIREP*PPRSTLELLKGSRR Trigger: CCTGCGGCTGCCTTTCAACAGCTCCAGTGTAGAGCGTGGTGGCAATGGCTCCCTGATGGCCCCTGAGGTGTCCACAGCCCATTCTGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CAA 90 bp | GTCTCTTGCTGGCCTCTCGCTGGAGCAGTGACCTCACCAGCCGTCTaGCCTCTGGAGGCACCGACTCAGGCATCTCAGGCAGCTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSCWPLAGAVTSPAV*PLEAPTQASQAAEL Trigger: AAGCTCAGCTGCCTGAGATGCCTGAGTCGGTGCCTCCAGAGGCAAGACGGCTGGTGAGGTCACTGCTCCAGCGAGAGGCCAGCAAGAGAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
||
| CDS GCA 72 bp | TTGATGGCAAAGGGAAAGGTGGGAGTCCCTGGAGCCTaGTCCCCGTCTGCTCCCTTCAGGACGACATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LMAKGKVGVPGA*SPSAPFRTTSG Trigger: CCCGGATGTCGTCCTGAAGGGAGCAGACGGGGAGCAGGCTCCAGGGACTCCCACCTTTCCCTTTGCCATCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CAA 72 bp | GCCACGCGGCTTGCCGGGACCAGCTCCTGGCTCATTTaGCTTAAGATGGCTTCGCTGGAGGAACCTGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATRLAGTSSWLI*LKMASLEEPAE Trigger: CTCGGCAGGTTCCTCCAGCGAAGCCATCTTAAGCAAAATGAGCCAGGAGCTGGTCCCGGCAAGCCGCGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS GCA 72 bp | CCACGCGGCTTGCCGGGACCAGCTCCTGGCTCATTTTaGTTAAGATGGCTTCGCTGGAGGAACCTGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRGLPGPAPGSF*LRWLRWRNLPR Trigger: TCTCGGCAGGTTCCTCCAGCGAAGCCATCTTAAGCAAAATGAGCCAGGAGCTGGTCCCGGCAAGCCGCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
||
| CDS CCA 72 bp | GCACATTTGCAGCTAAGCGTGCAGACGGTCTCTTGCTaGCCTCTCGCTGGAGCAGTGACCTCACCAGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: AHLQLSVQTVSC*PLAGAVTSPAV Trigger: GACGGCTGGTGAGGTCACTGCTCCAGCGAGAGGCCAGCAAGAGACCGTCTGCACGCTTAGCTGCAAATGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CAA 72 bp | TGGGCTGTGGACACCTCAGGGGCCATCAGGGAGCCATaGCCACCACGCTCTACACTGGAGCTGTTGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: WAVDTSGAIREP*PPRSTLELLKG Trigger: GCCTTTCAACAGCTCCAGTGTAGAGCGTGGTGGCAATGGCTCCCTGATGGCCCCTGAGGTGTCCACAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | CATAGGCGATGGCCCCCACAGCCCAGGTATCGGCTTTaGTGTAGTCAATTACCGCACTGGGGCCAGAATGGG | + |
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Preference number: 6 (lower is better) Translates to: HRRWPPQPRYRL*CSQLPHWGQNG Trigger: CCCATTCTGGCCCCAGTGCGGTAATTGACTACAGCAAAGCCGATACCTGGGCTGTGGGGGCCATCGCCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | GAGCTTCCTGGTAGCTGCGGCTCTCGAGGTGGGCACTaGCTTGGCCATAGAAGGGATTGGCAAGCCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ELPGSCGSRGGH*LGHRRDWQAQR Trigger: TCTTTGGGCTTGCCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGAGCCGCAGCTACCAGGAAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | CCAGCCAAAGCCACGCGGCTTGCCGGGACCAGCTCCTaGCTCATTTTGCTTAAGATGGCTTCGCTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PAKATRLAGTSS*LILLKMASLEE Trigger: TTCCTCCAGCGAAGCCATCTTAAGCAAAATGAGCCAGGAGCTGGTCCCGGCAAGCCGCGTGGCTTTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | CCCAGGTATCGGCTTTGCTGTAGTCAATTACCGCACTaGGGCCAGAATGGGCTGTGGACACCTCAGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PRYRLCCSQLPH*GQNGLWTPQGP Trigger: TGGCCCCTGAGGTGTCCACAGCCCATTCTGGCCCCAGTGCGGTAATTGACTACAGCAAAGCCGATACCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CAA 72 bp | ACGACATCCGGGCCCTTTCCTATAAGGCCAAGGTGTTaGGCCTTTTCCAGGTGCTGGGGCAGCGTGGGCATG | + |
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Preference number: 6 (lower is better) Translates to: TTSGPFPIRPRC*AFSRCWGSVGM Trigger: CATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAAACACCTTGGCCTTATAGGAAAGGGCCCGGATGTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CAA 90 bp | TCAGGGCTAGAAGATGCTCGCCCCAGAGGCTTAAGTGCAGCACATTaGCAGCTAAGCGTGCAGACGGTCTCTTGCTGGCCTCTCGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SGLEDARPRGLSAAH*QLSVQTVSCWPLAG Trigger: TCCAGCGAGAGGCCAGCAAGAGACCGTCTGCACGCTTAGCTGCAAATGTGCTGCACTTAAGCCTCTGGGGCGAGCATCTTCTAGCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS TCA 72 bp | TTGTCGGACTTGAGATCCCGATGGGCAATGCCCTGCTaGACCAGATGGTCCACGCCCTCCAGCAACTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSDLRSRWAMPC*TRWSTPSSNCK Trigger: CTTGCAGTTGCTGGAGGGCGTGGACCATCTGGTTCAGCAGGGCATTGCCCATCGGGATCTCAAGTCCGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | ACACTGGAGCTGTTGAAAGGCAGCCGCAGGCCAACATaGTGGTCAGCCAGGCAGCAGCCAAAGTCTGAGATC | + |
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Preference number: 6 (lower is better) Translates to: TLELLKGSRRPT*WSARQQPKSEI Trigger: GATCTCAGACTTTGGCTGCTGCCTGGCTGACCAGCATGTTGGCCTGCGGCTGCCTTTCAACAGCTCCAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | CAAGGTGTTTGGCCTTTTCCAGGTGCTGGGGCAGCGTaGGCATGGTGGCTTCATACACAGCGGCATTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: QGVWPFPGAGAA*AWWLHTQRHCN Trigger: GTTGCAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAAACACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | CCTATAAGGCCAAGGTGTTTGGCCTTTTCCAGGTGCTaGGGCAGCGTGGGCATGGTGGCTTCATACACAGCG | + |
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Preference number: 6 (lower is better) Translates to: PIRPRCLAFSRC*GSVGMVASYTA Trigger: CGCTGTGTATGAAGCCACCATGCCCACGCTGCCCCAGCACCTGGAAAAGGCCAAACACCTTGGCCTTATAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | CTGGAGCTGTTGAAAGGCAGCCGCAGGCCAACATGCTaGTCAGCCAGGCAGCAGCCAAAGTCTGAGATCACT | + |
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Preference number: 6 (lower is better) Translates to: LELLKGSRRPTC*SARQQPKSEIT Trigger: AGTGATCTCAGACTTTGGCTGCTGCCTGGCTGACCAGCATGTTGGCCTGCGGCTGCCTTTCAACAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CAA 72 bp | CAGGGACAGCCATCTGAGTCCCACTCCACAAGGATGTaGTCGGACTTGAGATCCCGATGGGCAATGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QGQPSESHSTRM*SDLRSRWAMPC Trigger: GCAGGGCATTGCCCATCGGGATCTCAAGTCCGACAACATCCTTGTGGAGTGGGACTCAGATGGCTGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CAA 90 bp | CAGCTGAGCTTCCTGGTAGCTGCGGCTCTCGAGGTGGGCACTGCCTaGGCCATAGAAGGGATTGGCAAGCCCAAAGATTTCATAGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: QLSFLVAAALEVGTA*AIEGIGKPKDFIGD Trigger: ATCGCCTATGAAATCTTTGGGCTTGCCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGAGCCGCAGCTACCAGGAAGCTCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CAA 90 bp | GCCAGCAGAGTGGCTGCTGACTGCTGCAAGAGCCAGGCGATCATCTaGTCCAATTTCAGGTTCTTCAGGGCTAGAAGATGCTCGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ASRVAADCCKSQAII*SNFRFFRARRCSPQ Trigger: CTGGGGCGAGCATCTTCTAGCCCTGAAGAACCTGAAATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS TCA 72 bp | CTTCTCTCTCAGCCTGTCAGCCAGCAGAGTGGCTGCTaGCTGCTGCAAGAGCCAGGCGATCATCTTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LLSQPVSQQSGC*LLQEPGDHLVQ Trigger: TTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGCTGACAGGCTGAGAGAGAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | CTCAGCCTGTCAGCCAGCAGAGTGGCTGCTGACTGCTaGAAGAGCCAGGCGATCATCTTGTCCAATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSLSASRVAADC*KSQAIILSNFR Trigger: CCTGAAATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGCTGACAGGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | GGTGAAGGCGCGGAAAACCCGGATGATGTTAGGGTGTaGGGCAAGCTGCTTGGGACCATCTCTGGATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GEGAENPDDVRV*GKLLGTISGSS Trigger: AGAAGATCCAGAGATGGTCCCAAGCAGCTTGCCCCACACCCTAACATCATCCGGGTTTTCCGCGCCTTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | TCTCGAGGTGGGCACTGCCTTGGCCATAGAAGGGATTaGCAAGCCCAAAGATTTCATAGGCGATGGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SRGGHCLGHRRD*QAQRFHRRWPP Trigger: TGGGGGCCATCGCCTATGAAATCTTTGGGCTTGCCAATCCCTTCTATGGCCAAGGCAGTGCCCACCTCGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CAA 72 bp | GAAGATGCTCGCCCCAGAGGCTTAAGTGCAGCACATTaGCAGCTAAGCGTGCAGACGGTCTCTTGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EDARPRGLSAAH*QLSVQTVSCWP Trigger: AGGCCAGCAAGAGACCGTCTGCACGCTTAGCTGCAAATGTGCTGCACTTAAGCCTCTGGGGCGAGCATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CAA 90 bp | CATGGTGGCTTCATACACAGCGGCATTGCAACCCTTGCCAATGGCTaGCCCTATCAGATAATCCTCCAGACGGAAGCCCTGCCAGCATCG | + |
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Preference number: 6 (lower is better) Translates to: HGGFIHSGIATLANG*PYQIILQTEALPAS Trigger: CGATGCTGGCAGGGCTTCCGTCTGGAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | TCTCTCAGCCTGTCAGCCAGCAGAGTGGCTGCTGACTaGTGCAAGAGCCAGGCGATCATCTTGTCCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: SLSLSASRVAAD*CKSQAIILSNF Trigger: GAAATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCACTCTGCTGGCTGACAGGCTGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CAA 72 bp | TCGCTGGAGGAACCTGCCGAGATATTCCACATCATCTaGATGGCAAAGGGAAAGGTGGGAGTCCCTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SLEEPAEIFHII*MAKGKVGVPGA Trigger: GGCTCCAGGGACTCCCACCTTTCCCTTTGCCATCAAGATGATGTGGAATATCTCGGCAGGTTCCTCCAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS TCA 72 bp | CATCTGAGTCCCACTCCACAAGGATGTTGTCGGACTTaGGATCCCGATGGGCAATGCCCTGCTGAACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HLSPTPQGCCRT*DPDGQCPAEPD Trigger: ATCTGGTTCAGCAGGGCATTGCCCATCGGGATCTCAAGTCCGACAACATCCTTGTGGAGTGGGACTCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | GCAGCGTGGGCATGGTGGCTTCATACACAGCGGCATTaGAACCCTTGCCAATGGCTTGCCCTATCAGATAAT | + |
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Preference number: 6 (lower is better) Translates to: AAWAWWLHTQRH*NPCQWLALSDN Trigger: ATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATGCCCACGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | AGAGCCTCACACTCCAGGTTAGCCAGAAACAGCATCTaGAGCTTTGTCTCCACGCAGCTCTTCTCTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RASHSRLARNSI*SFVSTQLFSLS Trigger: GCTGAGAGAGAAGAGCTGCGTGGAGACAAAGCTGCAGATGCTGTTTCTGGCTAACCTGGAGTGTGAGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | CTCCAGACGGAAGCCCTGCCAGCATCGAGTGTCCAGTaGGTCAGACACGCGCTTGGTTTTCTGTGTAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LQTEALPASSVQ*VRHALGFLCKN Trigger: ATTTTTACACAGAAAACCAAGCGCGTGTCTGACCCACTGGACACTCGATGCTGGCAGGGCTTCCGTCTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | TTGCCGGGACCAGCTCCTGGCTCATTTTGCTTAAGATaGCTTCGCTGGAGGAACCTGCCGAGATATTCCACA | + |
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Preference number: 6 (lower is better) Translates to: LPGPAPGSFCLR*LRWRNLPRYST Trigger: TGTGGAATATCTCGGCAGGTTCCTCCAGCGAAGCCATCTTAAGCAAAATGAGCCAGGAGCTGGTCCCGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | AGAAGGGATTGGCAAGCCCAAAGATTTCATAGGCGATaGCCCCCACAGCCCAGGTATCGGCTTTGCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RRDWQAQRFHRR*PPQPRYRLCCS Trigger: ACTACAGCAAAGCCGATACCTGGGCTGTGGGGGCCATCGCCTATGAAATCTTTGGGCTTGCCAATCCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | GCATGGTGGCTTCATACACAGCGGCATTGCAACCCTTaGCAATGGCTTGCCCTATCAGATAATCCTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: AWWLHTQRHCNP*QWLALSDNPPD Trigger: GTCTGGAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCACCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CCA 72 bp | TGGCTTCATACACAGCGGCATTGCAACCCTTGCCAATaGCTTGCCCTATCAGATAATCCTCCAGACGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: WLHTQRHCNPCQ*LALSDNPPDGS Trigger: GCTTCCGTCTGGAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CAA 72 bp | TTCATACACAGCGGCATTGCAACCCTTGCCAATGGCTaGCCCTATCAGATAATCCTCCAGACGGAAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FIHSGIATLANG*PYQIILQTEAL Trigger: CAGGGCTTCCGTCTGGAGGATTATCTGATAGGGCAAGCCATTGGCAAGGGTTGCAATGCCGCTGTGTATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030536.13 ENSMUST00000105817.4 |
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| CDS CAA 72 bp | GTGGCTGCTGACTGCTGCAAGAGCCAGGCGATCATCTaGTCCAATTTCAGGTTCTTCAGGGCTAGAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: VAADCCKSQAII*SNFRFFRARRC Trigger: GCATCTTCTAGCCCTGAAGAACCTGAAATTGGACAAGATGATCGCCTGGCTCTTGCAGCAGTCAGCAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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| CDS GCA 72 bp | ATCTTGTCCAATTTCAGGTTCTTCAGGGCTAGAAGATaGTCGCCCCAGAGGCTTAAGTGCAGCACATTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ILSNFRFFRARR*SPQRLKCSTFA Trigger: TGCAAATGTGCTGCACTTAAGCCTCTGGGGCGAGCATCTTCTAGCCCTGAAGAACCTGAAATTGGACAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030536.13 ENSMUST00000105816.8 ENSMUST00000105817.4 |
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