Pregenerated sensors for PIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032171Ensembl transcript IDs: ENSMUST00000034689.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGACAGCATGTGCAGATCTTCACTGGCCATGACCCCGCCCTGCTaGGGCCACCAGGAGGCTGCTGTCCCATCTCTAATTAATGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: RDSMCRSSLAMTPPC*GHQEAAVPSLINGL Trigger: GAGGCCATTAATTAGAGATGGGACAGCAGCCTCCTGGTGGCCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR CCA 90 bp | GGTGCTGCACTGCACCCTGAGGCTGAGTTGCTGCACCGCCAGGTATaGAGCGTCTGCTTTTTGCAACTGAACAGAGGAACGAATGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: GAALHPEAELLHRQV*SVCFLQLNRGTNGA Trigger: TGCTCCATTCGTTCCTCTGTTCAGTTGCAAAAAGCAGACGCTCCATACCTGGCGGTGCAGCAACTCAGCCTCAGGGTGCAGTGCAGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR TCA 90 bp | TTGCAAGCTAAGCTAGAGGTCCTCTTCTTCCCTCCAAAGGTCCCATaGTACTTGGAGGGCTGCCACTGCCTCCTGAGCCCACCCAACTGT | + |
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Preference number: 1 (lower is better) Translates to: LQAKLEVLFFPPKVP*YLEGCHCLLSPPNC Trigger: ACAGTTGGGTGGGCTCAGGAGGCAGTGGCAGCCCTCCAAGTATCATGGGACCTTTGGAGGGAAGAAGAGGACCTCTAGCTTAGCTTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR TCA 90 bp | CTGTTACCATGGAAACAGCACCTGGAGAGTGCTAGGTCTTGTGGCTaGGCCCAGGAATATCCAGTCAGAAGTGGGTGGCAGATGCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: LLPWKQHLESARSCG*AQEYPVRSGWQMLG Trigger: ACCCAGCATCTGCCACCCACTTCTGACTGGATATTCCTGGGCTCAGCCACAAGACCTAGCACTCTCCAGGTGCTGTTTCCATGGTAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR TCA 90 bp | TCCCTCCAAAGGTCCCATGATACTTGGAGGGCTGCCACTGCCTCCTaGGCCCACCCAACTGTTGCAAGACAGCAAAACTGTGACTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: SLQRSHDTWRAATAS*AHPTVARQQNCDCL Trigger: CAAACAGTCACAGTTTTGCTGTCTTGCAACAGTTGGGTGGGCTCAGGAGGCAGTGGCAGCCCTCCAAGTATCATGGGACCTTTGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR TCA 90 bp | CTGAGCCCAGGAATATCCAGTCAGAAGTGGGTGGCAGATGCTGGGTaGTTTGTTCTCACCAATAAGCAGTCTGTCTGTGTGCTGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: LSPGISSQKWVADAG*FVLTNKQSVCVLRG Trigger: CCCCCTCAGCACACAGACAGACTGCTTATTGGTGAGAACAAATCACCCAGCATCTGCCACCCACTTCTGACTGGATATTCCTGGGCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR CCA 90 bp | GGAAAAGGAGTGCGCATGTCTCCTGCCTGTAACTTGTGCTCAAGGTaGTCATGGTCTCAGAGTCAAAGAACCAGGCTGCACTTACAGCAC | + |
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Preference number: 1 (lower is better) Translates to: GKGVRMSPACNLCSR*SWSQSQRTRLHLQH Trigger: GTGCTGTAAGTGCAGCCTGGTTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACATGCGCACTCCTTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR CCA 90 bp | GATGCACAAATTACCACTATGGTAATACCTGCTTCTTACAGGCAGTaGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: DAQITTMVIPASYRQ*IRCGSGPRENLPEL Trigger: GAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCACTGCCTGTAAGAAGCAGGTATTACCATAGTGGTAATTTGTGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR GCA 90 bp | ACCCGGGTGAGATCTTGTCTCAAATTTCCAAATAAGGAAAAGGAGTaGGCATGTCTCCTGCCTGTAACTTGTGCTCAAGGTGGTCATGGT | + |
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Preference number: 1 (lower is better) Translates to: TRVRSCLKFPNKEKE*ACLLPVTCAQGGHG Trigger: ACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACATGCGCACTCCTTTTCCTTATTTGGAAATTTGAGACAAGATCTCACCCGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCCCATCCCCCACACCAGCCCACCGAACCCACGGCAGGGACAGCATGTGCATGACCCCGCCCTGCTaGGGCCACCAGGAGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CSPSPTPAHRTHGRDSMCMTPPC*GHQEAA Trigger: AGCAGCCTCCTGGTGGCCTCAGCAGGGCGGGGTCAT...GCACATGCTGTCCCTGCCGTGGGTTCGGTGGGCTGGTGTGGGGGATGGGGAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCCCATCCCCCACACCAGCCCACCGAACCCACGGCAGGGACAGCATGTGCGATCTTCACTGGCCATaGCCCCGCCCTGCTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: CSPSPTPAHRTHGRDSMCDLHWP*PRPAEA Trigger: GGCCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATC...GCACATGCTGTCCCTGCCGTGGGTTCGGTGGGCTGGTGTGGGGGATGGGGAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCCCATCCCCCACACCAGCCCACCGAACCCACGGCAGGGACAGCATGTGCCTGGCCCCCAAGCCTTaGTGGTTAGAACATCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: CSPSPTPAHRTHGRDSMCLAPKP*WLEHPP Trigger: TGGGGGATGTTCTAACCAGCAAGGCTTGGGGGCCAG...GCACATGCTGTCCCTGCCGTGGGTTCGGTGGGCTGGTGTGGGGGATGGGGAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAGTGGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTGGATCAGGTCACCTCTaGCCCCCTGAGCCTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: TGSGSDVAVALGRTSQSSGSGHL*PPEPGG Trigger: GCCCCCAGGCTCAGGGGGTCAGAGGTGACCTGATCC...AGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCACTGCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAGTGGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTCCTCCTGCCTGCCTCTaGGACCTGGGGGATCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: TGSGSDVAVALGRTSQSSPPACL*DLGDQV Trigger: GACCTGATCCCCCAGGTCTCAGAGGCAGGCAGGAGG...AGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCACTGCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGAAATGGAGCAGTGAGCAATACATGCTGCTCCCCATCCCCCACACCAGCCCTAACAGCTGGAAGTaGGGTGGGGTGGTGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QLKWSSEQYMLLPIPHTSPNSWK*GGVVGW Trigger: CCACCCCACCACCCCACCCCACTTCCAGCTGTTAGG...GCTGGTGTGGGGGATGGGGAGCAGCATGTATTGCTCACTGCTCCATTTCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCAGGGACAGCATGTGCAGATCTTCACTGGCCATGACCCCGCCCTGCTGAGGCATGGAAACAGCACCTaGAGAGTGCTAGGTCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: RQGQHVQIFTGHDPALLRHGNST*RVLGLV Trigger: CACAAGACCTAGCACTCTCCAGGTGCTGTTTCCATG...CCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGAAATGGAGCAGTGAGCAATACATGCTGCTCCCCATCCCCCACACCAGCTGGTCTGCGCATACCTaGACAGTCCCCAGGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QLKWSSEQYMLLPIPHTSWSAHT*TVPRVL Trigger: AAGCACCCTGGGGACTGTTCAGGTATGCGCAGACCA...GCTGGTGTGGGGGATGGGGAGCAGCATGTATTGCTCACTGCTCCATTTCAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGTCCGCCTTCTCTCCCCACCTGCCACTCAAAGCAATATCCATTTCCCAAAACAGGGAGCGGGATaGTCAGAGCCCCTCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GRVRLLSPPATQSNIHFPKQGAG*SEPLPV Trigger: GACTGGGAGGGGCTCTGAGCATCCCGCTCCCTGTTT...TGGGAAATGGATATTGCTTTGAGTGGCAGGTGGGGAGAGAAGGCGGACTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAGTGGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTTCCCCACTGCCCTTCTaGAGTCAATTCCTCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TGSGSDVAVALGRTSQSSSPLPF*SQFLQK Trigger: CTTCTGGAGGAATTGACTTCAGAAGGGCAGTGGGGA...AGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCACTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | CGGCAGGGACAGCATGTGCAGATCTTCACTGGCCATGACCCCGCCCTGCTGAGGCACTGGAGAACATTTTaGTGGAGGTATAGCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: RQGQHVQIFTGHDPALLRHWRTF*WRYSQL Trigger: GAGTTGGCTATACCTCCAGCAAAATGTTCTCCAGTG...CCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGTCCGCCTTCTCTCCCCACCTGCCACTCAAAGCAATATCCATTTCCCATCCAGACCTAACAGCTaGAAGTGGGGTGGGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GRVRLLSPPATQSNIHFPSRPNS*KWGGVV Trigger: CACCACCCCACCCCACTTCCAGCTGTTAGGTCTGGA...TGGGAAATGGATATTGCTTTGAGTGGCAGGTGGGGAGAGAAGGCGGACTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR CAA 90 bp | AGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTTGGTGTaGCAAGCTAAGCTAGAGGTCCTCTTCTTCCCTCCAAAGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RCGSGPRENLPELLV*QAKLEVLFFPPKVP Trigger: TGGGACCTTTGGAGGGAAGAAGAGGACCTCTAGCTTAGCTTGCAACACCAAGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCCACTGAAGACAGCAAAGGCTTGGCATGGAGGAACCCACTAGACATACCAGAAAGAAGGCCCTCCTaGCTGCCTCTGAGACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: HATEDSKGLAWRNPLDIPERRPS*LPLRPG Trigger: CCCAGGTCTCAGAGGCAGGCAGGAGGGCCTTCTTTC...TGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGCCAGAGCATCTGATAGTACACCCACTGTGTCACTCTTATACGTATGCACATCCGTGGGCTGTGTaGCAGCCAGAGCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LGPEHLIVHPLCHSYTYAHPWAV*QPEQAG Trigger: GCCAGCCTGCTCTGGCTGCCACACAGCCCACGGATG...TGCATACGTATAAGAGTGACACAGTGGGTGTACTATCAGATGCTCTGGCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR CAA 90 bp | TGGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTaGGTGTTGCAAGCTAAGCTAGAGGTCCTCTTCTTCCCTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: WIRCGSGPRENLPEL*VLQAKLEVLFFPPK Trigger: CTTTGGAGGGAAGAAGAGGACCTCTAGCTTAGCTTGCAACACCAAGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGCCAGAGCATCTGATAGTACACCCACTGTGTCACTCTTATACGTATGCATTGGAGGGCTGCCACTaGCTCCTGAGCCCACCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LGPEHLIVHPLCHSYTYALEGCH*LLSPPN Trigger: GTTGGGTGGGCTCAGGAGGCAGTGGCAGCCCTCCAA...TGCATACGTATAAGAGTGACACAGTGGGTGTACTATCAGATGCTCTGGCCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGAAATGGAGCAGTGAGCAATACATGCTGCTCCCCATCCCCCACACCAGCGGGTTGTTACACTGTTaGCATCCTAAAGGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QLKWSSEQYMLLPIPHTSGLLHC*HPKGPG Trigger: TCCTGGGCCTTTAGGATGGCAACAGTGTAACAACCC...GCTGGTGTGGGGGATGGGGAGCAGCATGTATTGCTCACTGCTCCATTTCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCTGCCTGTAACTTGTGCTCAAGGTGGTCATGGTCTCAGAGTCAAAGAACAGGAAGGGCATCCGTaGGCTGTGTGGCAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CLLPVTCAQGGHGLRVKEQEGHP*AVWQPE Trigger: CTCTGGCTGCCACACAGCCCACGGATGCCCTTCCTG...TTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGTCCGCCTTCTCTCCCCACCTGCCACTCAAAGCAATATCCATTTCCCAGGGCCTCTGTTACCATaGAAACAGCACCTGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GRVRLLSPPATQSNIHFPGPLLP*KQHLES Trigger: ACTCTCCAGGTGCTGTTTCCATGGTAACAGAGGCCC...TGGGAAATGGATATTGCTTTGAGTGGCAGGTGGGGAGAGAAGGCGGACTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCAGGGACAGCATGTGCAGATCTTCACTGGCCATGACCCCGCCCTGCTGAGGGCTCTAAATCATAGATaGCTGTTTGGCTATAATCAG | + |
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Preference number: 2 (lower is better) Translates to: RQGQHVQIFTGHDPALLRALNHR*LFGYNQ Trigger: CTGATTATAGCCAAACAGTCATCTATGATTTAGAGC...CCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCAGTGGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTCAGGTATGGAGCGTCTaGTTTTTGCAACTGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: TGSGSDVAVALGRTSQSSQVWSV*FLQLNR Trigger: TCTGTTCAGTTGCAAAAAGCAGACGCTCCATACCTG...AGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCACTGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGTCCGCCTTCTCTCCCCACCTGCCACTCAAAGCAATATCCATTTCCCAGAAGTGGGTGGCAGATaGTGGGTGATTTGTTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GRVRLLSPPATQSNIHFPEVGGR*WVICSH Trigger: GTGAGAACAAATCACCCAGCATCTGCCACCCACTTC...TGGGAAATGGATATTGCTTTGAGTGGCAGGTGGGGAGAGAAGGCGGACTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAGTGGGTCTGGACTGGTGGGGCTCAGAGGTATTTGCAGCCCTGGGAATACTGCACCGCCAGGTATaGAGCGTCTGCTTTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: IQVGLDWWGSEVFAALGILHRQV*SVCFLQ Trigger: TTGCAAAAAGCAGACGCTCCATACCTGGCGGTGCAG...TATTCCCAGGGCTGCAAATACCTCTGAGCCCCACCAGTCCAGACCCACTTGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCTGCCTGTAACTTGTGCTCAAGGTGGTCATGGTCTCAGAGTCAAAGAAGCTGGGGACGCTGAGTaGGCTCCTGGGGCTCATTTA | + |
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Preference number: 2 (lower is better) Translates to: CLLPVTCAQGGHGLRVKEAGDAE*APGAHL Trigger: TAAATGAGCCCCAGGAGCCCACTCAGCGTCCCCAGC...TTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCCACTGAAGACAGCAAAGGCTTGGCATGGAGGAACCCACTAGACATACCAACTCAGCTCAGCCTGTaGCTGTCTGAGCTGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: HATEDSKGLAWRNPLDIPTQLSL*LSELGK Trigger: TTTTCCCAGCTCAGACAGGCACAGGCTGAGCTGAGT...TGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR GCA 90 bp | CGGCAGGGACAGCATGTGCAGATCTTCACTGGCCATGACCCCGCCCTGCTGAGGAATAATGAATGGGGCTaGCTAATGCACTCATTTAAA | + |
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Preference number: 2 (lower is better) Translates to: RQGQHVQIFTGHDPALLRNNEWG*LMHSFK Trigger: TTTAAATGAGTGCATTAGGCAGCCCCATTCATTATT...CCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCCTGCCTGTAACTTGTGCTCAAGGTGGTCATGGTCTCAGAGTCAAAGAAGCTAGGTCTTGTGGCTaGGCCCAGGAATATCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CLLPVTCAQGGHGLRVKEARSCG*AQEYPV Trigger: GACTGGATATTCCTGGGCTCAGCCACAAGACCTAGC...TTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCTGCCTGTAACTTGTGCTCAAGGTGGTCATGGTCTCAGAGTCAAAGAACCAGTCAGAAGTGGGTaGCAGATGCTGGGTGATTTG | + |
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Preference number: 2 (lower is better) Translates to: CLLPVTCAQGGHGLRVKEPVRSG*QMLGDL Trigger: CAAATCACCCAGCATCTGCCACCCACTTCTGACTGG...TTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCTGCCTGTAACTTGTGCTCAAGGTGGTCATGGTCTCAGAGTCAAAGAAGCTTCTTACAGGCAGTaGATCAGATGTGGCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: CLLPVTCAQGGHGLRVKEASYRQ*IRCGSG Trigger: GCCACTGCCACATCTGATCCACTGCCTGTAAGAAGC...TTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCCACTGAAGACAGCAAAGGCTTGGCATGGAGGAACCCACTAGACATACCAAGGATAGAACTGATGTaGACATGTCTGTCACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HATEDSKGLAWRNPLDIPRIELM*TCLSQV Trigger: CACCTGTGACAGACATGTTCACATCAGTTCTATCCT...TGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGGTGTTGCAAGCTAAGCTAGAGGTCCTCTTCTTCCCTCCAAAGGTCCCATGGAGAACATTTTGCTaGAGGTATAGCCAACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLVLQAKLEVLFFPPKVPWRTFC*RYSQLS Trigger: GCTGAGTTGGCTATACCTCCAGCAAAATGTTCTCCA...TGGGACCTTTGGAGGGAAGAAGAGGACCTCTAGCTTAGCTTGCAACACCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCTCTGTGATTAAATCATCTCCGGGAACTCAGACTTGGATGCCATATTGGGACAGGAAAAGAGGTTaGCAGGGGTCCAAAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: MASVIKSSPGTQTWMPYWDRKRG*QGSKGQ Trigger: CTGTCCTTTGGACCCCTGCCAACCTCTTTTCCTGTC...CCAATATGGCATCCAAGTCTGAGTTCCCGGAGATGATTTAATCACAGAGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCCACTGAAGACAGCAAAGGCTTGGCATGGAGGAACCCACTAGACATACCATATATGCAGAAACCTTaGTTGAATTCTGAGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: HATEDSKGLAWRNPLDIPYMQKP*LNSEPS Trigger: TGAGGGCTCAGAATTCAATCAAGGTTTCTGCATATA...TGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTATACGTATGCACTCTTAATGTATACAGTCAATGAATACATGCACACGCATATATGCTGGGGACGCTaGGTGGGCTCCTGGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SYTYALLMYTVNEYMHTHICWGR*VGSWGS Trigger: TGAGCCCCAGGAGCCCACTCAGCGTCCCCAGCATAT...ATGCGTGTGCATGTATTCATTGACTGTATACATTAAGAGTGCATACGTATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTATACGTATGCACTCTTAATGTATACAGTCAATGAATACATGCACACGCATAGTGGGGTGGGGTGGTaGGGTGGTCTGCGCATACCT | + |
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Preference number: 2 (lower is better) Translates to: SYTYALLMYTVNEYMHTHSGVGW*GGLRIP Trigger: AGGTATGCGCAGACCACCCCACCACCCCACCCCACT...ATGCGTGTGCATGTATTCATTGACTGTATACATTAAGAGTGCATACGTATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTCATTAAACCTTCCTAATGACAAATGCTCCAGCAGGCGGCTGGCAAAGGTGGGTGGCAGATGCTaGGTGATTTGTTCTCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: KNSLNLPNDKCSSRRLAKVGGRC*VICSHQ Trigger: TTGGTGAGAACAAATCACCCAGCATCTGCCACCCAC...CTTTGCCAGCCGCCTGCTGGAGCATTTGTCATTAGGAAGGTTTAATGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAACTCATTAAACCTTCCTAATGACAAATGCTCCAGCAGGCGGCTGGCAAAGGTGGCAGATGCTGGGTaGTTTGTTCTCACCAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: KNSLNLPNDKCSSRRLAKVADAG*FVLTNK Trigger: CTTATTGGTGAGAACAAATCACCCAGCATCTGCCAC...CTTTGCCAGCCGCCTGCTGGAGCATTTGTCATTAGGAAGGTTTAATGAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCCACTGAAGACAGCAAAGGCTTGGCATGGAGGAACCCACTAGACATACCAACATGCATGCCTGAATaGAAATATACAAATTACTCG | + |
|
Preference number: 2 (lower is better) Translates to: HATEDSKGLAWRNPLDIPTCMPE*KYTNYS Trigger: CGAGTAATTTGTATATTTGCATTCAGGCATGCATGT...TGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCCCATCCCCCACACCAGCCCACCGAACCCACGGCAGGGACAGCATGTGCCACCCTGAGGCTGAGTaGCTGCACCGCCAGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: CSPSPTPAHRTHGRDSMCHPEAE*LHRQVW Trigger: CCATACCTGGCGGTGCAGCAACTCAGCCTCAGGGTG...GCACATGCTGTCCCTGCCGTGGGTTCGGTGGGCTGGTGTGGGGGATGGGGAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR TCA 72 bp | ACGGCAGGGACAGCATGTGCAGATCTTCACTGGCCATaGCCCCGCCCTGCTGAGGCCACCAGGAGGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TAGTACADLHWP*PRPAEATRRLL Trigger: CAGCAGCCTCCTGGTGGCCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCTGCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCCCATCCCCCACACCAGCCCACCGAACCCACGGCAGGGACAGCATGTGCGAAGACAGCAAAGGCTaGGCATGGAGGAACCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: CSPSPTPAHRTHGRDSMCEDSKG*AWRNPL Trigger: TAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTC...GCACATGCTGTCCCTGCCGTGGGTTCGGTGGGCTGGTGTGGGGGATGGGGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | CCCCCTCTCCTCCAGTTGAGGGGGCCTCTGTTACCATaGAAACAGCACCTGGAGAGTGCTAGGTCTTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPLLQLRGPLLP*KQHLESARSCG Trigger: GCCACAAGACCTAGCACTCTCCAGGTGCTGTTTCCATGGTAACAGAGGCCCCCTCAACTGGAGGAGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCAGTGGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTGGGGCTCAGAGGTATTaGCAGCCCTGGGAATATAGC | + |
|
Preference number: 3 (lower is better) Translates to: TGSGSDVAVALGRTSQSSGAQRY*QPWEYS Trigger: GCTATATTCCCAGGGCTGCAAATACCTCTGAGCCCC...AGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCACTGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR GCA 72 bp | GACAAATGCTCCAGCAGGCGGCTGGCAAAGAGCGATTaGTCTAGAAAGCAGCCAGATGGGAGCAGGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DKCSSRRLAKSD*SRKQPDGSRLR Trigger: CCTGAGCCTGCTCCCATCTGGCTGCTTTCTAGAGCAATCGCTCTTTGCCAGCCGCCTGCTGGAGCATTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | CCTGAACAGTCCCCAGGGTGCTTATACAAGTGGGTCTaGACTGGTGGGGCTCAGAGGTATTTGCAGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PEQSPGCLYKWV*TGGAQRYLQPW Trigger: CCAGGGCTGCAAATACCTCTGAGCCCCACCAGTCCAGACCCACTTGTATAAGCACCCTGGGGACTGTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR TCA 72 bp | AAGCTAGAGGTCCTCTTCTTCCCTCCAAAGGTCCCATaGTACTTGGAGGGCTGCCACTGCCTCCTGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KLEVLFFPPKVP*YLEGCHCLLSP Trigger: TGGGCTCAGGAGGCAGTGGCAGCCCTCCAAGTATCATGGGACCTTTGGAGGGAAGAAGAGGACCTCTAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR GCA 72 bp | TGCCTTGAGTCCCCACTGGCCCACTGGAGAACATTTTaGTGGAGGTATAGCCAACTCAGCTCAGCCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CLESPLAHWRTF*WRYSQLSSACA Trigger: GGCACAGGCTGAGCTGAGTTGGCTATACCTCCAGCAAAATGTTCTCCAGTGGGCCAGTGGGGACTCAAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | ACTGCCCTTCTGAAGTCAATTCCTCCAGAAGGAGCCTaGCTAGGACAGCCCCGAATAGGGGCAAACAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TALLKSIPPEGA*LGQPRIGANRE Trigger: CTCCCTGTTTGCCCCTATTCGGGGCTGTCCTAGCCAGGCTCCTTCTGGAGGAATTGACTTCAGAAGGGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | CTGCACCCTGAGGCTGAGTTGCTGCACCGCCAGGTATaGAGCGTCTGCTTTTTGCAACTGAACAGAGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: LHPEAELLHRQV*SVCFLQLNRGT Trigger: CGTTCCTCTGTTCAGTTGCAAAAAGCAGACGCTCCATACCTGGCGGTGCAGCAACTCAGCCTCAGGGTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR TCA 72 bp | CTGAGCCCACCCAACTGTTGCAAGACAGCAAAACTGTaGCTGTTTGCCTTGAGTCCCCACTGGCCCACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSPPNCCKTAKL*LFALSPHWPTG Trigger: TCCAGTGGGCCAGTGGGGACTCAAGGCAAACAGTCACAGTTTTGCTGTCTTGCAACAGTTGGGTGGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | ACAGTCCCCAGGGTGCTTATACAAGTGGGTCTGGACTaGTGGGGCTCAGAGGTATTTGCAGCCCTGGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: TVPRVLIQVGLD*WGSEVFAALGI Trigger: TATTCCCAGGGCTGCAAATACCTCTGAGCCCCACCAGTCCAGACCCACTTGTATAAGCACCCTGGGGACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | CGCATACCTGAACAGTCCCCAGGGTGCTTATACAAGTaGGTCTGGACTGGTGGGGCTCAGAGGTATTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RIPEQSPGCLYK*VWTGGAQRYLQ Trigger: CTGCAAATACCTCTGAGCCCCACCAGTCCAGACCCACTTGTATAAGCACCCTGGGGACTGTTCAGGTATGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | CTTGAGTCCCCACTGGCCCACTGGAGAACATTTTGCTaGAGGTATAGCCAACTCAGCTCAGCCTGTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LESPLAHWRTFC*RYSQLSSACAC Trigger: ACAGGCACAGGCTGAGCTGAGTTGGCTATACCTCCAGCAAAATGTTCTCCAGTGGGCCAGTGGGGACTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR GCA 72 bp | GAGGCTGAGTTGCTGCACCGCCAGGTATGGAGCGTCTaGTTTTTGCAACTGAACAGAGGAACGAATGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: EAELLHRQVWSV*FLQLNRGTNGA Trigger: TGCTCCATTCGTTCCTCTGTTCAGTTGCAAAAAGCAGACGCTCCATACCTGGCGGTGCAGCAACTCAGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | GTGCGCATGTCTCCTGCCTGTAACTTGTGCTCAAGGTaGTCATGGTCTCAGAGTCAAAGAACCAGGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VRMSPACNLCSR*SWSQSQRTRLH Trigger: GTGCAGCCTGGTTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACATGCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | AGAGCAGTGAGTTATGTGCGGGGCTTTCAGCTGAAATaGAGCAGTGAGCAATACATGCTGCTCCCCATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RAVSYVRGFQLK*SSEQYMLLPIP Trigger: GGGGATGGGGAGCAGCATGTATTGCTCACTGCTCCATTTCAGCTGAAAGCCCCGCACATAACTCACTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | ACTGTGACTGTTTGCCTTGAGTCCCCACTGGCCCACTaGAGAACATTTTGCTGGAGGTATAGCCAACTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TVTVCLESPLAH*RTFCWRYSQLS Trigger: GCTGAGTTGGCTATACCTCCAGCAAAATGTTCTCCAGTGGGCCAGTGGGGACTCAAGGCAAACAGTCACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTGGTGTTGCAAGCTAAGCTAGAGGTCCTCTTCTTCCCTCCAAAGGTCCCATGGAGCGTCTGCTTTTaGCAACTGAACAGAGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: LLVLQAKLEVLFFPPKVPWSVCF*QLNRGT Trigger: CGTTCCTCTGTTCAGTTGCAAAAAGCAGACGCTCCA...TGGGACCTTTGGAGGGAAGAAGAGGACCTCTAGCTTAGCTTGCAACACCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | AAACTTCATGCCACTGAAGACAGCAAAGGCTTGGCATaGAGGAACCCACTAGACATACCAGTTCTGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLHATEDSKGLA*RNPLDIPVLGR Trigger: CCTCCCCAGAACTGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATGAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGCCAGAGCATCTGATAGTACACCCACTGTGTCACTCTTATACGTATGCAAGACAGGAAAAGAGGTaGGCAGGGGTCCAAAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LGPEHLIVHPLCHSYTYARQEKR*AGVQRT Trigger: TGTCCTTTGGACCCCTGCCAACCTCTTTTCCTGTCT...TGCATACGTATAAGAGTGACACAGTGGGTGTACTATCAGATGCTCTGGCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR GCA 72 bp | ACCCAACTGTTGCAAGACAGCAAAACTGTGACTGTTTaGCTTGAGTCCCCACTGGCCCACTGGAGAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: TQLLQDSKTVTV*LESPLAHWRTF Trigger: AAATGTTCTCCAGTGGGCCAGTGGGGACTCAAGGCAAACAGTCACAGTTTTGCTGTCTTGCAACAGTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR GCA 72 bp | GAGTTCCAGGACAGCCAGAGCTACACAGAGAAACTCTaGCAAGTTTTATGGTTGGAGGGTCACCCTAACATG | + |
|
Preference number: 3 (lower is better) Translates to: EFQDSQSYTEKL*QVLWLEGHPNM Trigger: CATGTTAGGGTGACCCTCCAACCATAAAACTTGGCAGAGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CCA 72 bp | ATTACCACTATGGTAATACCTGCTTCTTACAGGCAGTaGATCAGATGTGGCAGTGGCCCTAGGGAGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: ITTMVIPASYRQ*IRCGSGPRENL Trigger: GAGGTTCTCCCTAGGGCCACTGCCACATCTGATCCACTGCCTGTAAGAAGCAGGTATTACCATAGTGGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCACTGAAGACAGCAAAGGCTTGGCATGGAGGAACCCACTAGACATACCACAGATGCTGGGTGATTaGTTCTCACCAATAAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HATEDSKGLAWRNPLDIPQMLGD*FSPISS Trigger: ACTGCTTATTGGTGAGAACAAATCACCCAGCATCTG...TGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR TCA 72 bp | GGAATATCCAGTCAGAAGTGGGTGGCAGATGCTGGGTaGTTTGTTCTCACCAATAAGCAGTCTGTCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GISSQKWVADAG*FVLTNKQSVCV Trigger: CACACAGACAGACTGCTTATTGGTGAGAACAAATCACCCAGCATCTGCCACCCACTTCTGACTGGATATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR TCA 72 bp | GACATACCAGTTCTGGGGAGGCTGATGCCACCCGGGTaGGATCTTGTCTCAAATTTCCAAATAAGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DIPVLGRLMPPG*DLVSNFQIRKR Trigger: CCTTTTCCTTATTTGGAAATTTGAGACAAGATCTCACCCGGGTGGCATCAGCCTCCCCAGAACTGGTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATACGTATGCACTCTTAATGTATACAGTCAATGAATACATGCACACGCATCCCCCTCTCCTCCAGTaGAGGGGGCCTCTGTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SYTYALLMYTVNEYMHTHPPLLQ*RGPLLP Trigger: TGGTAACAGAGGCCCCCTCAACTGGAGGAGAGGGGG...ATGCGTGTGCATGTATTCATTGACTGTATACATTAAGAGTGCATACGTATAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR TCA 72 bp | TGCACCGCCAGGTATGGAGCGTCTGCTTTTTGCAACTaGACAGAGGAACGAATGGAGCATATAACTAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: CTARYGASAFCN*TEERMEHITNK Trigger: CTTGTTAGTTATATGCTCCATTCGTTCCTCTGTTCAGTTGCAAAAAGCAGACGCTCCATACCTGGCGGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCCTGCCTGTAACTTGTGCTCAAGGTGGTCATGGTCTCAGAGTCAAAGAAATCATAGATGACTGTTaGGCTATAATCAGGAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CLLPVTCAQGGHGLRVKEIIDDC*AIIRRL Trigger: CAGCCTCCTGATTATAGCCAAACAGTCATCTATGAT...TTCTTTGACTCTGAGACCATGACCACCTTGAGCACAAGTTACAGGCAGGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR GCA 72 bp | AGATCTTGTCTCAAATTTCCAAATAAGGAAAAGGAGTaGGCATGTCTCCTGCCTGTAACTTGTGCTCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSCLKFPNKEKE*ACLLPVTCAQG Trigger: ACCTTGAGCACAAGTTACAGGCAGGAGACATGCGCACTCCTTTTCCTTATTTGGAAATTTGAGACAAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR TCA 90 bp | CGGCAGGGACAGCATGTGCAGATCTTCACTGGCCATGACCCCGCCCTGCTGAGGTTCCTGCCGCCAGGATaGGGGCCTCCGAGACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQGQHVQIFTGHDPALLRFLPPG*GPPRLA Trigger: AGCCAGTCTCGGAGGCCCTCATCCTGGCGGCAGGAA...CCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCTGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCCCCATCCCCCACACCAGCCCACCGAACCCACGGCAGGGACAGCATGTGCCCTGGCCATTCTTGCTaGTGCCTCCAACAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSPSPTPAHRTHGRDSMCPGHSC*CLQQCC Trigger: GCAGCACTGTTGGAGGCAGCAGCAAGAATGGCCAGG...GCACATGCTGTCCCTGCCGTGGGTTCGGTGGGCTGGTGTGGGGGATGGGGAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR CCA 90 bp | CGGCAGGGACAGCATGTGCAGATCTTCACTGGCCATGACCCCGCCCTGCTGAGGGTGAGCAGCGCACCTTaGCAGGCTCACCCTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQGQHVQIFTGHDPALLRVSSAP*QAHPGH Trigger: ATGGCCAGGGTGAGCCTGCCAAGGTGCGCTGCTCAC...CCTCAGCAGGGCGGGGTCATGGCCAGTGAAGATCTGCACATGCTGTCCCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGAAATGGAGCAGTGAGCAATACATGCTGCTCCCCATCCCCCACACCAGCTGCTGCCTCCAACAGTaGTGCCGCCGCTGGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLKWSSEQYMLLPIPHTSCCLQQ*CRRWAA Trigger: AGCGGCCCAGCGGCGGCAGCACTGTTGGAGGCAGCA...GCTGGTGTGGGGGATGGGGAGCAGCATGTATTGCTCACTGCTCCATTTCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR TCA 90 bp | ATACTGTGTGACAGTAGCAGGAAGGGCATCCGTGGGCTGTGTGGCAGCCAGAGCCTTCACCAGCAGATGTaGGCAGCGCACCTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILCDSSRKGIRGLCGSQSLHQQM*AAHLGR Trigger: CCTGCCAAGGTGCGCTGCTCACATCTGCTGGTGAAG...GCTCTGGCTGCCACACAGCCCACGGATGCCCTTCCTGCTACTGTCACACAGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGAAATGGAGCAGTGAGCAATACATGCTGCTCCCCATCCCCCACACCAGCGAGGGCCTCCGAGACTaGCTGTGCTTCACCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLKWSSEQYMLLPIPHTSEGLRD*LCFTSR Trigger: TCTGCTGGTGAAGCACAGCCAGTCTCGGAGGCCCTC...GCTGGTGTGGGGGATGGGGAGCAGCATGTATTGCTCACTGCTCCATTTCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR GCA 90 bp | ATACTGTGTGACAGTAGCAGGAAGGGCATCCGTGGGCTGTGTGGCAGCCAGAGCCTCCGAGACTGGCTGTaGTTCACCAGCAGATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILCDSSRKGIRGLCGSQSLRDWL*FTSRCE Trigger: CTCACATCTGCTGGTGAAGCACAGCCAGTCTCGGAG...GCTCTGGCTGCCACACAGCCCACGGATGCCCTTCCTGCTACTGTCACACAGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CAA 72 bp | TGTGGCAGTGGCCCTAGGGAGAACCTCCCAGAGCTCTaGGTGTTGCAAGCTAAGCTAGAGGTCCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSGPRENLPEL*VLQAKLEVLFF Trigger: GAAGAAGAGGACCTCTAGCTTAGCTTGCAACACCAAGAGCTCTGGGAGGTTCTCCCTAGGGCCACTGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGGCCAGAGCATCTGATAGTACACCCACTGTGTCACTCTTATACGTATGCACCTCCTTGCTCCTGGTaGTCTTTTCCTGCCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGPEHLIVHPLCHSYTYAPPCSW*SFPAAR Trigger: CCTGGCGGCAGGAAAAGATCACCAGGAGCAAGGAGG...TGCATACGTATAAGAGTGACACAGTGGGTGTACTATCAGATGCTCTGGCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR TCA 90 bp | ATACAAGTGGGTCTGGACTGGTGGGGCTCAGAGGTATTTGCAGCCCTGGGAATAAATGGTTTCTGCATCTaGCCTCTGCTGAAGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: IQVGLDWWGSEVFAALGINGFCI*PLLKGP Trigger: GGGTCCCTTCAGCAGAGGTCAGATGCAGAAACCATT...TATTCCCAGGGCTGCAAATACCTCTGAGCCCCACCAGTCCAGACCCACTTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGAAATGGAGCAGTGAGCAATACATGCTGCTCCCCATCCCCCACACCAGCCGACGCATCCTCAAATaGTTTCTGCATCTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLKWSSEQYMLLPIPHTSRRILK*FLHLTS Trigger: AGAGGTCAGATGCAGAAACCATTTGAGGATGCGTCG...GCTGGTGTGGGGGATGGGGAGCAGCATGTATTGCTCACTGCTCCATTTCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGTGTTGCAAGCTAAGCTAGAGGTCCTCTTCTTCCCTCCAAAGGTCCCACAGAGCTGCAATCACTaGACTGTGAGGCCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLQAKLEVLFFPPKVPQSCNH*TVRPEI Trigger: AATCTCTGGCCTCACAGTTCAGTGATTGCAGCTCTG...TGGGACCTTTGGAGGGAAGAAGAGGACCTCTAGCTTAGCTTGCAACACCAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| 3UTR CAA 72 bp | CATGACAAACTTCATGCCACTGAAGACAGCAAAGGCTaGGCATGGAGGAACCCACTAGACATACCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HDKLHATEDSKG*AWRNPLDIPVL Trigger: CAGAACTGGTATGTCTAGTGGGTTCCTCCATGCCAAGCCTTTGCTGTCTTCAGTGGCATGAAGTTTGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACTCATTAAACCTTCCTAATGACAAATGCTCCAGCAGGCGGCTGGCAAAGGCAATCACTGAACTGTaGGGCCAGAGATTCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNSLNLPNDKCSSRRLAKAITEL*GQRFKV Trigger: GACTTTGAATCTCTGGCCTCACAGTTCAGTGATTGC...CTTTGCCAGCCGCCTGCTGGAGCATTTGTCATTAGGAAGGTTTAATGAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
||
| CDS CCA 90 bp | TCCGAGACTGGCTGTGCTTCACCAGCAGATGTGAGCAGCGCACCTTaGCAGGCTCACCCTGGCCATTCTTGCTGCTGCCTCCAACAGTGC | + |
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Preference number: 5 (lower is better) Translates to: SETGCASPADVSSAP*QAHPGHSCCCLQQC Trigger: GCACTGTTGGAGGCAGCAGCAAGAATGGCCAGGGTGAGCCTGCCAAGGTGCGCTGCTCACATCTGCTGGTGAAGCACAGCCAGTCTCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| CDS-3UTR CAA 90 bp | ATGGCCTCTGTGATTAAATCATCTCCGGGAACTCAGACTTGGATGCCATATTGGTCACCCTGGCCATTCTaGCTGCTGCCTCCAACAGTG | + |
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Preference number: 5 (lower is better) Translates to: MASVIKSSPGTQTWMPYWSPWPF*LLPPTV Trigger: CACTGTTGGAGGCAGCAGCAAGAATGGCCAGGGTGA...CCAATATGGCATCCAAGTCTGAGTTCCCGGAGATGATTTAATCACAGAGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| CDS CCA 72 bp | AGCAGATGTGAGCAGCGCACCTTGGCAGGCTCACCCTaGCCATTCTTGCTGCTGCCTCCAACAGTGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SRCEQRTLAGSP*PFLLLPPTVLP Trigger: CGGCAGCACTGTTGGAGGCAGCAGCAAGAATGGCCAGGGTGAGCCTGCCAAGGTGCGCTGCTCACATCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| CDS CCA 72 bp | GGCTGTGCTTCACCAGCAGATGTGAGCAGCGCACCTTaGCAGGCTCACCCTGGCCATTCTTGCTGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GCASPADVSSAP*QAHPGHSCCCL Trigger: GAGGCAGCAGCAAGAATGGCCAGGGTGAGCCTGCCAAGGTGCGCTGCTCACATCTGCTGGTGAAGCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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| CDS CAA 90 bp | CTCCGAGACTGGCTGTGCTTCACCAGCAGATGTGAGCAGCGCACCTaGGCAGGCTCACCCTGGCCATTCTTGCTGCTGCCTCCAACAGTG | + |
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Preference number: 6 (lower is better) Translates to: LRDWLCFTSRCEQRT*AGSPWPFLLLPPTV Trigger: CACTGTTGGAGGCAGCAGCAAGAATGGCCAGGGTGAGCCTGCCAAGGTGCGCTGCTCACATCTGCTGGTGAAGCACAGCCAGTCTCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034689.8 |
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