Pregenerated sensors for PIM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024014Ensembl transcript IDs: ENSMUST00000024811.9, ENSMUST00000234270.2, ENSMUST00000234650.2, ENSMUST00000234665.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGACCCAGTCTCCATGGTGACTAAAGTTCCATCGACAGGGCTCTaGTCCACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GDPVSMVTKVPSTGL*STPTPNQGWIQGSP Trigger: TGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGTGGATCAGAGCCCTGTCGATGGAACTTTAGTCACCATGGAGACTGGGTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR TCA 90 bp | CTCTTTCCCTTGTGGGAGGCTCCTCCAGGGACCTGGAGTCTGGAATaGGTTGTCATTGCTGTCCCTGCATCGTCACGCAGGGTCCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LFPLWEAPPGTWSLE*VVIAVPASSRRVLL Trigger: CAACAGGACCCTGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTGGAGGAGCCTCCCACAAGGGAAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR GCA 90 bp | TCCTCCAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTaGATCGTCACGCAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: SSRDLESGMSCHCCP*IVTQGPVGRPEDKL Trigger: GAGCTTGTCTTCTGGCCTCCCAACAGGACCCTGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR CCA 90 bp | GTAGTCTCTTTCCCTTGTGGGAGGCTCCTCCAGGGACCTGGAGTCTaGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCAGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: VVSFPCGRLLQGPGV*NELSLLSLHRHAGS Trigger: GGACCCTGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTGGAGGAGCCTCCCACAAGGGAAAGAGACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACAGGGCCTCCCTGGAGGGTCTaGCAGACAGCAGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: STGGVPTEGTQELEEVTGPPWRV*QTAAER Trigger: CCTTTCTGCTGCTGTCTGTCAGACCCTCCAGGGAGG...CCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACAGGGACACCCCCAACCAGGGATaGATTCAGGGGAGCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: HRRSPHRRHSGVGRGDRDTPNQG*IQGSPA Trigger: TGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGT...GTCCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACGCTCACGCAGGGTCCTGTTaGGAGGCCAGAAGACAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: TPTPNQGWIQGSPATLDAHAGSC*EARRQA Trigger: AGCTTGTCTTCTGGCCTCCCAACAGGACCCTGCGTG...AGCGTCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCCTCCCTGGAGGGTCTaGCAGACAGCAGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SRDLESGMSCHCCPCIVTPPWRV*QTAAER Trigger: CCTTTCTGCTGCTGTCTGTCAGACCCTCCAGGGAGG...CGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACGCTCAGGGACCTGGAGTCTaGAATGAGTTGTCATTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TPTPNQGWIQGSPATLDAQGPGV*NELSLL Trigger: CAGCAATGACAACTCATTCCAGACTCCAGGTCCCTG...AGCGTCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAACATGACAATAAACCGGGGGCAACAGTCAGTGGAAGCTTGGACAGGAAGACCTGGAGTCTGGAATaGGTTGTCATTGCTGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: AEHDNKPGATVSGSLDRKTWSLE*VVIAVP Trigger: AGGGACAGCAATGACAACTCATTCCAGACTCCAGGT...CTTCCTGTCCAAGCTTCCACTGACTGTTGCCCCCGGTTTATTGTCATGTTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTGTTATCATCTACAGTCCTTTTGCAGGCTACCATGCCGGAACTATACACACCCGGCCCATCTTGGTaGCCCAGTCTCCATGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: KLLSSTVLLQATMPELYTPGPSW*PSLHGD Trigger: GTCACCATGGAGACTGGGTCACCAAGATGGGCCGGG...TGTGTATAGTTCCGGCATGGTAGCCTGCAAAAGGACTGTAGATGATAACAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCATTGGTTGTGCGTTCTGTGTGAGGTCTTGGTTTTGAAACAGTTAAGTCGAAACCCAGGCAGAGTTTaGGAAGCAGCAGGTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LHWLCVLCEVLVLKQLSRNPGRV*EAAGKR Trigger: CCTCTTACCTGCTGCTTCTCAAACTCTGCCTGGGTT...TCGACTTAACTGTTTCAAAACCAAGACCTCACACAGAACGCACAACCAATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTGTTATCATCTACAGTCCTTTTGCAGGCTACCATGCCGGAACTATACACACAGGGACCTGGAGTCTaGAATGAGTTGTCATTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KLLSSTVLLQATMPELYTQGPGV*NELSLL Trigger: CAGCAATGACAACTCATTCCAGACTCCAGGTCCCTG...TGTGTATAGTTCCGGCATGGTAGCCTGCAAAAGGACTGTAGATGATAACAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCATTGGTTGTGCGTTCTGTGTGAGGTCTTGGTTTTGAAACAGTTAAGTCGAAGGAGTTGGAAGAGGTaGCAGGGACTTAAATATGGT | + |
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Preference number: 2 (lower is better) Translates to: LHWLCVLCEVLVLKQLSRRSWKR*QGLKYG Trigger: ACCATATTTAAGTCCCTGTCACCTCTTCCAACTCCT...TCGACTTAACTGTTTCAAAACCAAGACCTCACACAGAACGCACAACCAATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR TCA 72 bp | TTGTGGGAGGCTCCTCCAGGGACCTGGAGTCTGGAATaGGTTGTCATTGCTGTCCCTGCATCGTCACGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LWEAPPGTWSLE*VVIAVPASSRR Trigger: CCTGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTGGAGGAGCCTCCCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR GCA 72 bp | GACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTaGATCGTCACGCAGGGTCCTGTTGGGAGGCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: DLESGMSCHCCP*IVTQGPVGRPE Trigger: TTCTGGCCTCCCAACAGGACCCTGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR CCA 72 bp | TTCCCTTGTGGGAGGCTCCTCCAGGGACCTGGAGTCTaGAATGAGTTGTCATTGCTGTCCCTGCATCGTCAC | + |
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Preference number: 3 (lower is better) Translates to: FPCGRLLQGPGV*NELSLLSLHRH Trigger: GTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTGGAGGAGCCTCCCACAAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGAACATGACAATAAACCGGGGGCAACAGTCAGTGGAAGCTTGGACAGGAAGTCACGCAGGGTCCTGTaGGGAGGCCAGAAGACAAGC | + |
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Preference number: 3 (lower is better) Translates to: AEHDNKPGATVSGSLDRKSRRVL*GGQKTS Trigger: GCTTGTCTTCTGGCCTCCCAACAGGACCCTGCGTGA...CTTCCTGTCCAAGCTTCCACTGACTGTTGCCCCCGGTTTATTGTCATGTTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR CAA 90 bp | CGCAAAGAGGGGCCCAGGACCAGTGAAGTAGTCTCTTTCCCTTGTGGGAGGCTCGGAGTCTGGAATGAGTaGTCATTGCTGTCCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: RKEGPRTSEVVSFPCGRLGVWNE*SLLSLH Trigger: ATGCAGGGACAGCAATGACAACTCATTCCAGACTCC...GAGCCTCCCACAAGGGAAAGAGACTACTTCACTGGTCCTGGGCCCCTCTTTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| 3UTR TCA 72 bp | GTCTCCATGGTGACTAAAGTTCCATCGACAGGGCTCTaGTCCACTCCCACCCCCAACCAGGGATGGATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSMVTKVPSTGL*STPTPNQGWIQ Trigger: CTGAATCCATCCCTGGTTGGGGGTGGGAGTGGATCAGAGCCCTGTCGATGGAACTTTAGTCACCATGGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCAGAGAGGATCCGGAAGGCACACCACACCGGAACTGTTTTATGTACAGTGAAGGCACTCAGGAGTaGGAAGAGGTGACAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: SPREDPEGTPHRNCFMYSEGTQE*EEVTGT Trigger: AGTCCCTGTCACCTCTTCCAACTCCTGAGTGCCTTC...ACTGTACATAAAACAGTTCCGGTGTGGTGTGCCTTCCGGATCCTCTCTGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR GCA 72 bp | TGTACAGTATACTTTACTCAGATAAAACCAGCGGGCTaGACGCTGCTCAAAGCACAGCCCCAGAGAGGATCC | + |
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Preference number: 3 (lower is better) Translates to: CTVYFTQIKPAG*TLLKAQPQRGS Trigger: GGATCCTCTCTGGGGCTGTGCTTTGAGCAGCGTGCAGCCCGCTGGTTTTATCTGAGTAAAGTATACTGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR TCA 72 bp | GAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTaGCAGGGACTTAAATATGGTGCTAGTTTTTATCCC | + |
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Preference number: 3 (lower is better) Translates to: ESPQKALRSWKR*QGLKYGASFYP Trigger: GGGATAAAAACTAGCACCATATTTAAGTCCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGAACATGACAATAAACCGGGGGCAACAGTCAGTGGAAGCTTGGACAGGAAGGGAAGACCAGTTTGCTaGGGAATTTTACTAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: AEHDNKPGATVSGSLDRKGRPVC*GILLKE Trigger: CTCCTTTAGTAAAATTCCCAAGCAAACTGGTCTTCC...CTTCCTGTCCAAGCTTCCACTGACTGTTGCCCCCGGTTTATTGTCATGTTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR-3UTR CAA 90 bp | AAATTGTTATCATCTACAGTCCTTTTGCAGGCTACCATGCCGGAACTATACACAGGAGTCTGGAATGAGTaGTCATTGCTGTCCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: KLLSSTVLLQATMPELYTGVWNE*SLLSLH Trigger: ATGCAGGGACAGCAATGACAACTCATTCCAGACTCC...TGTGTATAGTTCCGGCATGGTAGCCTGCAAAAGGACTGTAGATGATAACAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | CCTGCATCGTCACGCAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCTGGCGTGCAGGTCGTTaGAGGGCGCGGCGCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PASSRRVLLGGQKTSSPSWRAGR*RARRAG Trigger: ACCTGCGCGCCGCGCCCTGCAACGACCTGCACGCCA...GGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTGCGTGACGATGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CCA 90 bp | GGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGAACAGCGGGCCCACCTaGTACTGCGACTCCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GRPEDKLSLPGGSDRQQQNSGPT*YCDSRG Trigger: GCCCCTGGAGTCGCAGTACCAGGTGGGCCCGCTGTT...CTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CCA 90 bp | CCTGCATCGTCACGCAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCAGAACCCCGCAGTTGTaGCAATGCCGCACGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PASSRRVLLGGQKTSSPSRTPQL*QCRTAS Trigger: GGAGGCCGTGCGGCATTGCCACAACTGCGGGGTTCT...GGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTGCGTGACGATGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR TCA 90 bp | AGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACAGGGTGTAGACTGTGTCCTTaGGCAGCGCCCCCGACCCGA | + |
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Preference number: 4 (lower is better) Translates to: STGGVPTEGTQELEEVTGCRLCP*AAPPTR Trigger: TCGGGTCGGGGGCGCTGCTCAAGGACACAGTCTACA...CCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR GCA 90 bp | CCTGCATCGTCACGCAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCGGCAGGAGGTCACCCTaGATCCATGGATGGTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PASSRRVLLGGQKTSSPSGRRSP*IHGWFR Trigger: CCGGAACCATCCATGGATGCAGGGTGACCTCCTGCC...GGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTGCGTGACGATGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGAAAGGCTCCGGCGCCAGCTTGGTaGCGTGCAGGTCGTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QKTSSPSLEGLTDSSRKAPAPAW*RAGRCR Trigger: CCTGCAACGACCTGCACGCCACCAAGCTGGCGCCGG...AGCCTTTCTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGAAAGGCTTGCCCGGCGCCAGCTTaGTGGCGTGCAGGTCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QKTSSPSLEGLTDSSRKACPAPA*WRAGRC Trigger: GCAACGACCTGCACGCCACCAAGCTGGCGCCGGGCA...AGCCTTTCTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR TCA 90 bp | GGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGAAAGGAGGGCCGATCTaGTGGTCTCAGGGACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GRPEDKLSLPGGSDRQQQKGGPI*WSQGQA Trigger: TGCCTGTCCCTGAGACCATCAGATCGGCCCTCCTTT...CTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | ACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACGCTAGACAGCTGCCGACCTaGCGTGGTAGCGATGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TPTPNQGWIQGSPATLDARQLPT*RGSDGS Trigger: GCTACCATCGCTACCACGGCAGGTCGGCAGCTGTCT...AGCGTCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CCA 90 bp | CAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCAGGCGCGGCGCGCAGGTaGGCCAGGGAGTTGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: QGPGVWNELSLLSLHRHAGAARR*ARELIL Trigger: CAAGATCAACTCCCTGGCCCACCTGCGCGCCGCGCC...TGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR TCA 90 bp | CACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACAGGGACCTTGCTGGACCCCGGTaGCAGACTGTGCAGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: HRRSPHRRHSGVGRGDRDLAGPR*QTVQMD Trigger: ATCCATCTGCACAGTCTGTCACCGGGGTCCAGCAAG...GTCCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR TCA 90 bp | GGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACTTGCTGGACCCCGGTaGCAGACTGTGCAGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: GPVGRPEDKLSLPGGSDRLAGPR*QTVQMD Trigger: ATCCATCTGCACAGTCTGTCACCGGGGTCCAGCAAG...TCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGAATGGATCTCAGAAGCTaGCTGGGGCAGGAGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: GPVGRPEDKLSLPGGSDRMDLRS*LGQEVT Trigger: GGTGACCTCCTGCCCCAGGCAGCTTCTGAGATCCAT...TCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR CCA 90 bp | GGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGATCCTTGATGTCGCGGTaGAGAACCCCGCAGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GPVGRPEDKLSLPGGSDRSLMSR*RTPQLW Trigger: CCACAACTGCGGGGTTCTCCACCGCGACATCAAGGA...TCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CCA 90 bp | GGCTACAGCAGCTGTCCCACCGGAGCCCCAACACCCCAGCAAGCGTCACAGCCCCCCTGCATCCATGGATaGTTCCGGATTTCTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GYSSCPTGAPTPQQASQPPCIHG*FRISSK Trigger: CTTTGAAGAAATCCGGAACCATCCATGGATGCAGGG...GGGCTGTGACGCTTGCTGGGGTGTTGGGGCTCCGGTGGGACAGCTGCTGTAGCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR CCA 90 bp | CGCAAAGAGGGGCCCAGGACCAGTGAAGTAGTCTCTTTCCCTTGTGGGAGGCTCATCTCAGAAGCTGCCTaGGGCAGGAGGTCACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RKEGPRTSEVVSFPCGRLISEAA*GRRSPC Trigger: GCAGGGTGACCTCCTGCCCCAGGCAGCTTCTGAGAT...GAGCCTCCCACAAGGGAAAGAGACTACTTCACTGGTCCTGGGCCCCTCTTTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR TCA 90 bp | ACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACGCTAGATGTTCTCGTCCTTaGTGTCGCGGTGGAGAACCC | + |
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Preference number: 4 (lower is better) Translates to: TPTPNQGWIQGSPATLDARCSRP*CRGGEP Trigger: GGGTTCTCCACCGCGACATCAAGGACGAGAACATCT...AGCGTCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR TCA 90 bp | CGCAAAGAGGGGCCCAGGACCAGTGAAGTAGTCTCTTTCCCTTGTGGGAGGCTCAAAGGAGGGCCGATCTaGTGGTCTCAGGGACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RKEGPRTSEVVSFPCGRLKGGPI*WSQGQA Trigger: TGCCTGTCCCTGAGACCATCAGATCGGCCCTCCTTT...GAGCCTCCCACAAGGGAAAGAGACTACTTCACTGGTCCTGGGCCCCTCTTTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | CAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCAACGGCCTCCAGCACCTaGCAGAAGAATCCTCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGPGVWNELSLLSLHRHATASST*QKNPRA Trigger: GGCCCGAGGATTCTTCTGGCAGGTGCTGGAGGCCGT...TGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGAAGGGACCAGACAGCTaGCGACCTGCCGTGGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRDLESGMSCHCCPCIVTKGPDS*RPAVVA Trigger: CGCTACCACGGCAGGTCGGCAGCTGTCTGGTCCCTT...CGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGAAAGGCTGGCAGGAGGTCACCCTaGATCCATGGATGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QKTSSPSLEGLTDSSRKAGRRSP*IHGWFR Trigger: CCGGAACCATCCATGGATGCAGGGTGACCTCCTGCC...AGCCTTTCTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTATTTCTCCCAGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGATCTCAGAAGCTGCCTaGGGCAGGAGGTCACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVFLPAQAESPQKALRSWISEAA*GRRSPC Trigger: GCAGGGTGACCTCCTGCCCCAGGCAGCTTCTGAGAT...CCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCTGGGAGAAATACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGAAAGGCTCTTGCTGGACCCCGGTaGCAGACTGTGCAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKTSSPSLEGLTDSSRKALAGPR*QTVQMD Trigger: ATCCATCTGCACAGTCTGTCACCGGGGTCCAGCAAG...AGCCTTTCTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
||
| CDS-3UTR GCA 90 bp | GCAGAACATGACAATAAACCGGGGGCAACAGTCAGTGGAAGCTTGGACAGGAAGCCGCAGTTGTGGCAATaGCGCACGGCCTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: AEHDNKPGATVSGSLDRKPQLWQ*RTASST Trigger: GGTGCTGGAGGCCGTGCGGCATTGCCACAACTGCGG...CTTCCTGTCCAAGCTTCCACTGACTGTTGCCCCCGGTTTATTGTCATGTTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACGCTCCCGGTGACAGACTGTaGAGATGGATCTCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTPNQGWIQGSPATLDAPGDRL*RWISEA Trigger: AGCTTCTGAGATCCATCTGCACAGTCTGTCACCGGG...AGCGTCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAAGGTGCTGACACTCTaGAGAGACAGTTTGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGPVGRPEDKLSLPGGSDKVLTL*RDSLPE Trigger: TTCAGGCAAACTGTCTCTTCAGAGTGTCAGCACCTT...GTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCAAAAGGAGGGCCGATCTaGTGGTCTCAGGGACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGPGVWNELSLLSLHRHAKGGPI*WSQGQA Trigger: TGCCTGTCCCTGAGACCATCAGATCGGCCCTCCTTT...TGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACTCTGAAGAGACAGTTTaGCTGAAGAACACTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGPVGRPEDKLSLPGGSDSEETV*LKNTWP Trigger: GGGCCAAGTGTTCTTCAGGCAAACTGTCTCTTCAGA...GTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCCAGAGAGGATCCGGAAGGCACACCACACCGGAACTGTTTTATGTACAGTGGCAGGAGGTCACCCTaGATCCATGGATGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPREDPEGTPHRNCFMYSGRRSP*IHGWFR Trigger: CCGGAACCATCCATGGATGCAGGGTGACCTCCTGCC...ACTGTACATAAAACAGTTCCGGTGTGGTGTGCCTTCCGGATCCTCTCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS-3UTR GCA 90 bp | ATCCACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACCCGGTGACAGACTGTaGAGATGGATCTCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSHPQPGMDSGEPSNTRPGDRL*RWISEA Trigger: AGCTTCTGAGATCCATCTGCACAGTCTGTCACCGGG...TCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGTGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACGCTAAGGTGCTGACACTCTaGAGAGACAGTTTGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPTPNQGWIQGSPATLDAKVLTL*RDSLPE Trigger: TTCAGGCAAACTGTCTCTTCAGAGTGTCAGCACCTT...AGCGTCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGAGAGGATCCGGAAGGCACACCACACCGGAACTGTTTTATGTACAGTCGGTCCTTCTCCACGTaGTTAATGGCCACCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPREDPEGTPHRNCFMYSRSFST*LMATGK Trigger: CTTGCCGGTGGCCATTAAGCACGTGGAGAAGGACCG...ACTGTACATAAAACAGTTCCGGTGTGGTGTGCCTTCCGGATCCTCTCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS-3UTR GCA 90 bp | CACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACAGGGACTCTGAAGAGACAGTTTaGCTGAAGAACACTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRRSPHRRHSGVGRGDRDSEETV*LKNTWP Trigger: GGGCCAAGTGTTCTTCAGGCAAACTGTCTCTTCAGA...GTCCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGAGAGGATCCGGAAGGCACACCACACCGGAACTGTTTTATGTACAGTATGGATCTCAGAAGCTaGCTGGGGCAGGAGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SPREDPEGTPHRNCFMYSMDLRS*LGQEVT Trigger: GGTGACCTCCTGCCCCAGGCAGCTTCTGAGATCCAT...ACTGTACATAAAACAGTTCCGGTGTGGTGTGCCTTCCGGATCCTCTCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGGATCCGGAAGGCACACCACACCGGAACTGTTTTATGTACAGTCAGCATGGATCTCAGAAGCTaGCTGGGGCAGGAGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PERIRKAHHTGTVLCTVSMDLRS*LGQEVT Trigger: GGTGACCTCCTGCCCCAGGCAGCTTCTGAGATCCAT...GCTGACTGTACATAAAACAGTTCCGGTGTGGTGTGCCTTCCGGATCCTCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGTGCCTGAAGAACACTTaGCCCTTGATGATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPEDKLSLPGGSDRQQQCLKNT*PLMISS Trigger: TGAAGAGATCATCAAGGGCCAAGTGTTCTTCAGGCA...CTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACATGATCTCTTCATCGTaGTCAAACGGAATATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGPVGRPEDKLSLPGGSDMISSS*SNGISP Trigger: CGGAGATATTCCGTTTGAGCACGATGAAGAGATCAT...GTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | AGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCAGCCCGGTGACAGACTGTaGAGATGGATCTCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLESGMSCHCCPCIVTQPGDRL*RWISEA Trigger: AGCTTCTGAGATCCATCTGCACAGTCTGTCACCGGG...CTGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACTGCCTGAAGAACACTTaGCCCTTGATGATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQHRRSPHRRHSGVGRGDCLKNT*PLMISS Trigger: TGAAGAGATCATCAAGGGCCAAGTGTTCTTCAGGCA...GTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR CCA 90 bp | AGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACAGGGTGCCTGAAGAACACTTaGCCCTTGATGATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STGGVPTEGTQELEEVTGCLKNT*PLMISS Trigger: TGAAGAGATCATCAAGGGCCAAGTGTTCTTCAGGCA...CCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR CCA 90 bp | CGCAAAGAGGGGCCCAGGACCAGTGAAGTAGTCTCTTTCCCTTGTGGGAGGCTCCCCTGCATCCATGGATaGTTCCGGATTTCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKEGPRTSEVVSFPCGRLPCIHG*FRISSK Trigger: CTTTGAAGAAATCCGGAACCATCCATGGATGCAGGG...GAGCCTCCCACAAGGGAAAGAGACTACTTCACTGGTCCTGGGCCCCTCTTTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGAAAGGCTAAGGTGCTGACACTCTaGAGAGACAGTTTGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKTSSPSLEGLTDSSRKAKVLTL*RDSLPE Trigger: TTCAGGCAAACTGTCTCTTCAGAGTGTCAGCACCTT...AGCCTTTCTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | AGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACAGGGATGATCTCTTCATCGTaGTCAAACGGAATATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STGGVPTEGTQELEEVTGMISSS*SNGISP Trigger: CGGAGATATTCCGTTTGAGCACGATGAAGAGATCAT...CCCTGTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR TCA 90 bp | ACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGACGCTCATTTAATAAGGTGCTaGCACTCTGAAGAGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTPNQGWIQGSPATLDAHLIRC*HSEETV Trigger: AACTGTCTCTTCAGAGTGTCAGCACCTTATTAAATG...AGCGTCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | AAATTGTTATCATCTACAGTCCTTTTGCAGGCTACCATGCCGGAACTATACACAGCCAGCTTGGTGGCGTaGAGGTCGTTGCAGGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLLSSTVLLQATMPELYTASLVA*RSLQGA Trigger: CGCGCCCTGCAACGACCTGCACGCCACCAAGCTGGC...TGTGTATAGTTCCGGCATGGTAGCCTGCAAAAGGACTGTAGATGATAACAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR GCA 90 bp | AAATTGTTATCATCTACAGTCCTTTTGCAGGCTACCATGCCGGAACTATACACAAGCCGAAGCCACCGCTaGCCAACAGCGGGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSSTVLLQATMPELYTSRSHR*PTAGPP Trigger: AGGTGGGCCCGCTGTTGGGCAGCGGTGGCTTCGGCT...TGTGTATAGTTCCGGCATGGTAGCCTGCAAAAGGACTGTAGATGATAACAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CCA 90 bp | AGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCAGCCCTGCATCCATGGATaGTTCCGGATTTCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDLESGMSCHCCPCIVTQPCIHG*FRISSK Trigger: CTTTGAAGAAATCCGGAACCATCCATGGATGCAGGG...CTGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGAGAGGATCCGGAAGGCACACCACACCGGAACTGTTTTATGTACAGTTCTGAAGAGACAGTTTaGCTGAAGAACACTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPREDPEGTPHRNCFMYSSEETV*LKNTWP Trigger: GGGCCAAGTGTTCTTCAGGCAAACTGTCTCTTCAGA...ACTGTACATAAAACAGTTCCGGTGTGGTGTGCCTTCCGGATCCTCTCTGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS-3UTR GCA 90 bp | AAATTGTTATCATCTACAGTCCTTTTGCAGGCTACCATGCCGGAACTATACACATGTCGGCGACGCGGATaGCAGAGTAGACCGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KLLSSTVLLQATMPELYTCRRRG*QSRPSR Trigger: TCGGCTCGGTCTACTCTGGCATCCGCGTCGCCGACA...TGTGTATAGTTCCGGCATGGTAGCCTGCAAAAGGACTGTAGATGATAACAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CCA 90 bp | TTGCATTGGTTGTGCGTTCTGTGTGAGGTCTTGGTTTTGAAACAGTTAAGTCGAATCTCAGAAGCTGCCTaGGGCAGGAGGTCACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHWLCVLCEVLVLKQLSRISEAA*GRRSPC Trigger: GCAGGGTGACCTCCTGCCCCAGGCAGCTTCTGAGAT...TCGACTTAACTGTTTCAAAACCAAGACCTCACACAGAACGCACAACCAATGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR TCA 90 bp | CAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCACATTTAATAAGGTGCTaGCACTCTGAAGAGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGPGVWNELSLLSLHRHAHLIRC*HSEETV Trigger: AACTGTCTCTTCAGAGTGTCAGCACCTTATTAAATG...TGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR GCA 90 bp | GCAGAACATGACAATAAACCGGGGGCAACAGTCAGTGGAAGCTTGGACAGGAAGATGATCTCTTCATCGTaGTCAAACGGAATATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AEHDNKPGATVSGSLDRKMISSS*SNGISP Trigger: CGGAGATATTCCGTTTGAGCACGATGAAGAGATCAT...CTTCCTGTCCAAGCTTCCACTGACTGTTGCCCCCGGTTTATTGTCATGTTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| 3UTR CAA 72 bp | TTGCATTGGTTGTGCGTTCTGTGTGAGGTCTTGGTTTaGAAACAGTTAAGTCGAAACCAAAGAGGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHWLCVLCEVLV*KQLSRNQRGRP Trigger: TGGTCTTCCTCTTTGGTTTCGACTTAACTGTTTCAAAACCAAGACCTCACACAGAACGCACAACCAATGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS-3UTR TCA 90 bp | TTGCATTGGTTGTGCGTTCTGTGTGAGGTCTTGGTTTTGAAACAGTTAAGTCGACATTTAATAAGGTGCTaGCACTCTGAAGAGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHWLCVLCEVLVLKQLSRHLIRC*HSEETV Trigger: AACTGTCTCTTCAGAGTGTCAGCACCTTATTAAATG...TCGACTTAACTGTTTCAAAACCAAGACCTCACACAGAACGCACAACCAATGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| 3UTR CAA 72 bp | TTTGTTTTGCATTGGTTGTGCGTTCTGTGTGAGGTCTaGGTTTTGAAACAGTTAAGTCGAAACCAAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVLHWLCVLCEV*VLKQLSRNQRG Trigger: TCCTCTTTGGTTTCGACTTAACTGTTTCAAAACCAAGACCTCACACAGAACGCACAACCAATGCAAAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
||
| CDS GCA 90 bp | TGGGCACTCGGGTGCCATTGGGCGGCAAGTTGTCGGCGACGCGGATaGCAGAGTAGACCGAGCCGAAGCCACCGCTGCCCAACAGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WALGCHWAASCRRRG*QSRPSRSHRCPTAG Trigger: GCCCGCTGTTGGGCAGCGGTGGCTTCGGCTCGGTCTACTCTGGCATCCGCGTCGCCGACAACTTGCCGCCCAATGGCACCCGAGTGCCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234650.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTATTTCTCCCAGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGGTGGCGTGCAGGTCGTaGCAGGGCGCGGCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QVFLPAQAESPQKALRSWVACRS*QGAARR Trigger: CCTGCGCGCCGCGCCCTGCAACGACCTGCACGCCAC...CCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCTGGGAGAAATACTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS-3UTR CAA 90 bp | GGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGATTGCCCGGCGCCAGCTaGGTGGCGTGCAGGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPVGRPEDKLSLPGGSDRLPGAS*VACRSL Trigger: CAACGACCTGCACGCCACCAAGCTGGCGCCGGGCAA...TCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGGGGCTCCTTCTCTTaGCCCGGCGCCAGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGPVGRPEDKLSLPGGSDRGSFS*PGASLV Trigger: CACCAAGCTGGCGCCGGGCAAAGAGAAGGAGCCCCT...GTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS CCA 90 bp | CGCCCGAGAAGTCCGAGCTCACCTTCTTCAACAGGACCACTTCCATaGGCACTCGGGTGCCATTGGGCGGCAAGTTGTCGGCGACGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPRSPSSPSSTGPLP*ALGCHWAASCRRRG Trigger: TCCGCGTCGCCGACAACTTGCCGCCCAATGGCACCCGAGTGCCCATGGAAGTGGTCCTGTTGAAGAAGGTGAGCTCGGACTTCTCGGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234650.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGAATGGCCACCGGCAAGTaGTCGGCGACGCGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPVGRPEDKLSLPGGSDRMATGK*SATRMP Trigger: TGGCATCCGCGTCGCCGACAACTTGCCGGTGGCCAT...TCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
||
| CDS-3UTR CAA 90 bp | GGCTACAGCAGCTGTCCCACCGGAGCCCCAACACCCCAGCAAGCGTCACAGCCCAAGATGTTCTCGTCCTaGATGTCGCGGTGGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GYSSCPTGAPTPQQASQPKMFSS*MSRWRT Trigger: GGTTCTCCACCGCGACATCAAGGACGAGAACATCTT...GGGCTGTGACGCTTGCTGGGGTGTTGGGGCTCCGGTGGGACAGCTGCTGTAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CAA 90 bp | CAAGTATTTCTCCCAGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGTGGAGAACCCCGCAGTaGTGGCAATGCCGCACGGCC | + |
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Preference number: 5 (lower is better) Translates to: QVFLPAQAESPQKALRSWWRTPQ*WQCRTA Trigger: GGCCGTGCGGCATTGCCACAACTGCGGGGTTCTCCA...CCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCTGGGAGAAATACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CAA 90 bp | GGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGCCGAAGTCGATGAGTTaGATTTCGCCGCGGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GRPEDKLSLPGGSDRQQQPKSMS*ISPRLR Trigger: CCTGAGCCGCGGCGAAATCAAACTCATCGACTTCGG...CTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS CCA 90 bp | CGCCCGAGAAGTCCGAGCTCACCTTCTTCAACAGGACCACTTCCATaGGCACTCGGGTGCCATTGGGCAGTTCTCCCCAATCGGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: RPRSPSSPSSTGPLP*ALGCHWAVLPNRKS Trigger: GGATTTCCGATTGGGGAGAACTGCCCAATGGCACCCGAGTGCCCATGGAAGTGGTCCTGTTGAAGAAGGTGAGCTCGGACTTCTCGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS-3UTR CAA 90 bp | CCTGCATCGTCACGCAGGGTCCTGTTGGGAGGCCAGAAGACAAGCTCTCCCTCCAAGAACACTTGGCCCTaGATGATCTCTTCATCGTGC | + |
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Preference number: 5 (lower is better) Translates to: PASSRRVLLGGQKTSSPSKNTWP*MISSSC Trigger: GCACGATGAAGAGATCATCAAGGGCCAAGTGTTCTT...GGAGGGAGAGCTTGTCTTCTGGCCTCCCAACAGGACCCTGCGTGACGATGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCCAGAAGACAAGCTCTCCCTCCCTGGAGGGTCTGACAGACAGCAGCAGTTGCCTGAAGAACACTaGGCCCTTGATGATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GRPEDKLSLPGGSDRQQQLPEEH*ALDDLF Trigger: GAAGAGATCATCAAGGGCCAAGTGTTCTTCAGGCAA...CTGCTGCTGTCTGTCAGACCCTCCAGGGAGGGAGAGCTTGTCTTCTGGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGCACAGGCGGAGTCCCCACAGAAGGCACTCAGGAGTTGGAAGAGGTGACTTGCCTGAAGAACACTaGGCCCTTGATGATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SQHRRSPHRRHSGVGRGDLPEEH*ALDDLF Trigger: GAAGAGATCATCAAGGGCCAAGTGTTCTTCAGGCAA...GTCACCTCTTCCAACTCCTGAGTGCCTTCTGTGGGGACTCCGCCTGTGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR CAA 90 bp | ATCCACTCCCACCCCCAACCAGGGATGGATTCAGGGGAGCCCAGCAACACTAGAAAGAACACTTGGCCCTaGATGATCTCTTCATCGTGC | + |
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Preference number: 5 (lower is better) Translates to: IHSHPQPGMDSGEPSNTRKNTWP*MISSSC Trigger: GCACGATGAAGAGATCATCAAGGGCCAAGTGTTCTT...TCTAGTGTTGCTGGGCTCCCCTGAATCCATCCCTGGTTGGGGGTGGGAGTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS-3UTR CAA 90 bp | CAGGGACCTGGAGTCTGGAATGAGTTGTCATTGCTGTCCCTGCATCGTCACGCATTGCCTGAAGAACACTaGGCCCTTGATGATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: QGPGVWNELSLLSLHRHALPEEH*ALDDLF Trigger: GAAGAGATCATCAAGGGCCAAGTGTTCTTCAGGCAA...TGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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| CDS-3UTR CAA 90 bp | GCAGAACATGACAATAAACCGGGGGCAACAGTCAGTGGAAGCTTGGACAGGAAGAAGAACACTTGGCCCTaGATGATCTCTTCATCGTGC | + |
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Preference number: 5 (lower is better) Translates to: AEHDNKPGATVSGSLDRKKNTWP*MISSSC Trigger: GCACGATGAAGAGATCATCAAGGGCCAAGTGTTCTT...CTTCCTGTCCAAGCTTCCACTGACTGTTGCCCCCGGTTTATTGTCATGTTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234665.2 |
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| CDS GCA 72 bp | GGCTCCTTCTCTTTGCCCGGCGCCAGCTTGGTGGCGTaGAGGTCGTTGCAGGGCGCGGCGCGCAGGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSFSLPGASLVA*RSLQGAARRWA Trigger: GGCCCACCTGCGCGCCGCGCCCTGCAACGACCTGCACGCCACCAAGCTGGCGCCGGGCAAAGAGAAGGAGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234650.2 |
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| CDS CCA 72 bp | CCAGGGGCTCCTTCTCTTTGCCCGGCGCCAGCTTGGTaGCGTGCAGGTCGTTGCAGGGCGCGGCGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PGAPSLCPAPAW*RAGRCRARRAG Trigger: ACCTGCGCGCCGCGCCCTGCAACGACCTGCACGCCACCAAGCTGGCGCCGGGCAAAGAGAAGGAGCCCCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234650.2 |
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| CDS CAA 72 bp | TCTTTGCCCGGCGCCAGCTTGGTGGCGTGCAGGTCGTaGCAGGGCGCGGCGCGCAGGTGGGCCAGGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLPGASLVACRS*QGAARRWAREL Trigger: CAACTCCCTGGCCCACCTGCGCGCCGCGCCCTGCAACGACCTGCACGCCACCAAGCTGGCGCCGGGCAAAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234650.2 |
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| CDS CCA 72 bp | ACTCCAGGGGCTCCTTCTCTTTGCCCGGCGCCAGCTTaGTGGCGTGCAGGTCGTTGCAGGGCGCGGCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: TPGAPSLCPAPA*WRAGRCRARRA Trigger: TGCGCGCCGCGCCCTGCAACGACCTGCACGCCACCAAGCTGGCGCCGGGCAAAGAGAAGGAGCCCCTGGAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234650.2 |
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| CDS CAA 90 bp | GGCTCCTTCTCTTTGCCCGGCGCCAGCTTGGTGGCGTGCAGGTCGTaGCAGGGCGCGGCGCGCAGGTGGGCCAGGGAGTTGATCTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GSFSLPGASLVACRS*QGAARRWARELILD Trigger: GTCCAAGATCAACTCCCTGGCCCACCTGCGCGCCGCGCCCTGCAACGACCTGCACGCCACCAAGCTGGCGCCGGGCAAAGAGAAGGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS GCA 72 bp | GGGTGCCATTGGGCGGCAAGTTGTCGGCGACGCGGATaGCAGAGTAGACCGAGCCGAAGCCACCGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GCHWAASCRRRG*QSRPSRSHRCP Trigger: TGGGCAGCGGTGGCTTCGGCTCGGTCTACTCTGGCATCCGCGTCGCCGACAACTTGCCGCCCAATGGCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234650.2 |
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| CDS CCA 72 bp | GAGCCGAAGCCACCGCTGCCCAACAGCGGGCCCACCTaGTACTGCGACTCCAGGGGCTCCTTCTCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: EPKPPLPNSGPT*YCDSRGSFSLP Trigger: GGGCAAAGAGAAGGAGCCCCTGGAGTCGCAGTACCAGGTGGGCCCGCTGTTGGGCAGCGGTGGCTTCGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234650.2 |
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| CDS GCA 72 bp | CCGCAGTTGTGGCAATGCCGCACGGCCTCCAGCACCTaGCAGAAGAATCCTCGGGCCAGGTCCTCCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PQLWQCRTASST*QKNPRARSSCR Trigger: CCTACAGGAGGACCTGGCCCGAGGATTCTTCTGGCAGGTGCTGGAGGCCGTGCGGCATTGCCACAACTGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234650.2 |
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| CDS GCA 72 bp | AGAGCAGGATCCCAAGGGACCAGACAGCTGCCGACCTaGCGTGGTAGCGATGGTAGCGAATCCACTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RAGSQGTRQLPT*RGSDGSESTLE Trigger: CTCCAGAGTGGATTCGCTACCATCGCTACCACGGCAGGTCGGCAGCTGTCTGGTCCCTTGGGATCCTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS GCA 72 bp | AGTTCTCCCCAATCGGAAATCCGGTCCTTCTCCACGTaGTTAATGGCCACCGGCAAGTTGTCGGCGACGCGG | + |
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Preference number: 6 (lower is better) Translates to: SSPQSEIRSFST*LMATGKLSATR Trigger: CCGCGTCGCCGACAACTTGCCGGTGGCCATTAAGCACGTGGAGAAGGACCGGATTTCCGATTGGGGAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS CCA 72 bp | AGTCCGAGCTCACCTTCTTCAACAGGACCACTTCCATaGGCACTCGGGTGCCATTGGGCGGCAAGTTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: SPSSPSSTGPLP*ALGCHWAASCR Trigger: CCGACAACTTGCCGCCCAATGGCACCCGAGTGCCCATGGAAGTGGTCCTGTTGAAGAAGGTGAGCTCGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234650.2 |
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| CDS TCA 72 bp | CGCCGCGGCTCAGGTCGATTAAGATGTTCTCGTCCTTaGTGTCGCGGTGGAGAACCCCGCAGTTGTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: RRGSGRLRCSRP*CRGGEPRSCGN Trigger: ATTGCCACAACTGCGGGGTTCTCCACCGCGACATCAAGGACGAGAACATCTTAATCGACCTGAGCCGCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024811.9 ENSMUST00000234650.2 |
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| CDS GCA 72 bp | CCTTCTTCAACAGGACCACTTCCATGGGCACTCGGGTaGCATTGGGCAGTTCTCCCCAATCGGAAATCCGGT | + |
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Preference number: 6 (lower is better) Translates to: PSSTGPLPWALG*HWAVLPNRKSG Trigger: ACCGGATTTCCGATTGGGGAGAACTGCCCAATGGCACCCGAGTGCCCATGGAAGTGGTCCTGTTGAAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS CCA 72 bp | AGTCCGAGCTCACCTTCTTCAACAGGACCACTTCCATaGGCACTCGGGTGCCATTGGGCAGTTCTCCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SPSSPSSTGPLP*ALGCHWAVLPN Trigger: ATTGGGGAGAACTGCCCAATGGCACCCGAGTGCCCATGGAAGTGGTCCTGTTGAAGAAGGTGAGCTCGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024811.9 |
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| CDS CAA 72 bp | TCTGAAGAGACAGTTTGCCTGAAGAACACTTGGCCCTaGATGATCTCTTCATCGTGCTCAAACGGAATATCT | + |
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Preference number: 6 (lower is better) Translates to: SEETVCLKNTWP*MISSSCSNGIS Trigger: AGATATTCCGTTTGAGCACGATGAAGAGATCATCAAGGGCCAAGTGTTCTTCAGGCAAACTGTCTCTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024811.9 ENSMUST00000234270.2 ENSMUST00000234665.2 |
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