Pregenerated sensors for PILRB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066682Ensembl transcript IDs: ENSMUST00000164886.2, ENSMUST00000196162.5, ENSMUST00000198024.5, ENSMUST00000199247.2, ENSMUST00000199773.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACAATCCCTCAGTTGTCCCTTGGGATGGCAAGCACTCACCTGGCTaGGGTTTAGGCTTTAGTGTGCTGGCCTGTAGGAGAAGAAACTGT | + |
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Preference number: 1 (lower is better) Translates to: NNPSVVPWDGKHSPG*GLGFSVLACRRRNC Trigger: ACAGTTTCTTCTCCTACAGGCCAGCACACTAAAGCCTAAACCCCAGCCAGGTGAGTGCTTGCCATCCCAAGGGACAACTGAGGGATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR CCA 90 bp | TACCACTTGGGTCCCCAGGAATTCCATCCAGGTCATTGGGCTAGGTaGCAGGCTCCATTTCTCACTGAGCTATCTCACTGGTACACACTA | + |
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Preference number: 1 (lower is better) Translates to: YHLGPQEFHPGHWAR*QAPFLTELSHWYTL Trigger: TAGTGTGTACCAGTGAGATAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGAATTCCTGGGGACCCAAGTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR CCA 90 bp | TTCTCTTTGTACCACTTGGGTCCCCAGGAATTCCATCCAGGTCATTaGGCTAGGTGGCAGGCTCCATTTCTCACTGAGCTATCTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: FSLYHLGPQEFHPGH*ARWQAPFLTELSHW Trigger: CCAGTGAGATAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGAATTCCTGGGGACCCAAGTGGTACAAAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR GCA 90 bp | CATCCCTGGCTCAGGATCCATCAAACTCAGGTCCTTCTACTCATGTaGAATGCTTTTCTGACTGAATCATCTCTCTGGCTCCCTTGCATG | + |
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Preference number: 1 (lower is better) Translates to: HPWLRIHQTQVLLLM*NAFLTESSLWLPCM Trigger: CATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTGCACATGAGTAGAAGGACCTGAGTTTGATGGATCCTGAGCCAGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR GCA 90 bp | CTCATGTGCAATGCTTTTCTGACTGAATCATCTCTCTGGCTCCCTTaGATGCCTCTCATAATAACTTCCCAACAATCCCTCAGTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: LMCNAFLTESSLWLP*MPLIITSQQSLSCP Trigger: GGGACAACTGAGGGATTGTTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTGCACATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR CCA 90 bp | CTCTTCCTTGACCAGGGATGTGATTATAAATTCCTGCCACATCCCTaGCTCAGGATCCATCAAACTCAGGTCCTTCTACTCATGTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: LFLDQGCDYKFLPHP*LRIHQTQVLLLMCN Trigger: ATTGCACATGAGTAGAAGGACCTGAGTTTGATGGATCCTGAGCCAGGGATGTGGCAGGAATTTATAATCACATCCCTGGTCAAGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR CCA 90 bp | GTCCTTCTACTCATGTGCAATGCTTTTCTGACTGAATCATCTCTCTaGCTCCCTTGCATGCCTCTCATAATAACTTCCCAACAATCCCTC | + |
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Preference number: 1 (lower is better) Translates to: VLLLMCNAFLTESSL*LPCMPLIITSQQSL Trigger: GAGGGATTGTTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTGCACATGAGTAGAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR TCA 90 bp | CCATCAAACTCAGGTCCTTCTACTCATGTGCAATGCTTTTCTGACTaGATCATCTCTCTGGCTCCCTTGCATGCCTCTCATAATAACTTC | + |
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Preference number: 1 (lower is better) Translates to: PSNSGPSTHVQCFSD*IISLAPLHASHNNF Trigger: GAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTGCACATGAGTAGAAGGACCTGAGTTTGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTGTGTCCGGACAATGTaGGGGGCCCAGGGCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: RDTQYDLASEERISEPRECVRTM*GAQGSK Trigger: TTTGCTGCCCTGGGCCCCTCACATTGTCCGGACACA...CTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000198024.5 |
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| 3UTR-3UTR TCA 90 bp | TTTATTGAAAGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTGTGTCCGGACAATGTaGGGGGCCCAGGGCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FIESANNSMSRQRTAQSGCVRTM*GAQGSK Trigger: TTTGCTGCCCTGGGCCCCTCACATTGTCCGGACACA...GCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACTTTCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000198024.5 |
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| 3UTR-3UTR TCA 90 bp | GCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGACAATCCTGCAGCCATaGGCTCTGATTCTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ANNSMSRQRTAQSGFENQTILQP*ALILAG Trigger: CCCAGCCAGAATCAGAGCTCATGGCTGCAGGATTGT...CTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196162.5 ENSMUST00000198024.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTGTGTGTCAGCCATGCTaGTTCTCCATCCTGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: EERISEPREYQSLAEVGVVCQPC*FSILTL Trigger: GAGAGTCAGGATGGAGAACCAGCATGGCTGACACAC...AACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000198024.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGCTCAGGATCCATCAAACTCAGGTCCTTCTACTCATGTGCAATGCTTTAAGCACTCACCTGGCTaGGGTTTAGGCTTTAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SLAQDPSNSGPSTHVQCFKHSPG*GLGFSV Trigger: CACACTAAAGCCTAAACCCCAGCCAGGTGAGTGCTT...AAAGCATTGCACATGAGTAGAAGGACCTGAGTTTGATGGATCCTGAGCCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTCTCTCTGGCTCCCTTaGATGCCTCTCATAATAACT | + |
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Preference number: 2 (lower is better) Translates to: RDTQYDLASEERISEPRESLWLP*MPLIIT Trigger: AGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGA...CTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAAGTGGGGGTTATCTTCTATGTCTATCCAAGAATGGTGATGTTTCATAGCGTGATTATAAATTCCTaGCACATCCCTGGCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: AEVGVIFYVYPRMVMFHSVIINS*HIPGSG Trigger: TCCTGAGCCAGGGATGTGGCAGGAATTTATAATCAC...GCTATGAAACATCACCATTCTTGGATAGACATAGAAGATAACCCCCACTTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR CCA 72 bp | GGTCCCCAGGAATTCCATCCAGGTCATTGGGCTAGGTaGCAGGCTCCATTTCTCACTGAGCTATCTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: GPQEFHPGHWAR*QAPFLTELSHW Trigger: CCAGTGAGATAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGAATTCCTGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR CCA 72 bp | TACCACTTGGGTCCCCAGGAATTCCATCCAGGTCATTaGGCTAGGTGGCAGGCTCCATTTCTCACTGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: YHLGPQEFHPGH*ARWQAPFLTEL Trigger: TAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGAATTCCTGGGGACCCAAGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTATCCAACAATCCCTCAGTaGTCCCTTGGGATGGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: RENIRTQRVSESGRSGGYPTIPQ*SLGMAS Trigger: GCTTGCCATCCCAAGGGACAACTGAGGGATTGTTGG...ATAACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR TCA 72 bp | CTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTaGGAATCAGAGACACACAGTATGACCTGGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LHEQTENSTVRL*ESETHSMTWLL Trigger: CAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000198024.5 ENSMUST00000199247.2 |
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| 3UTR CCA 72 bp | ACAATCGCCCAGATTGAGTTTTCTCTTTGTACCACTTaGGTCCCCAGGAATTCCATCCAGGTCATTGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: TIAQIEFSLCTT*VPRNSIQVIGL Trigger: TAGCCCAATGACCTGGATGGAATTCCTGGGGACCCAAGTGGTACAAAGAGAAAACTCAATCTGGGCGATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR TCA 72 bp | TCAGGTCCTTCTACTCATGTGCAATGCTTTTCTGACTaGATCATCTCTCTGGCTCCCTTGCATGCCTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SGPSTHVQCFSD*IISLAPLHASH Trigger: ATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTGCACATGAGTAGAAGGACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR GCA 72 bp | CTCAGGATCCATCAAACTCAGGTCCTTCTACTCATGTaGAATGCTTTTCTGACTGAATCATCTCTCTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: LRIHQTQVLLLM*NAFLTESSLWL Trigger: GAGCCAGAGAGATGATTCAGTCAGAAAAGCATTGCACATGAGTAGAAGGACCTGAGTTTGATGGATCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR TCA 72 bp | AGAATGGTGATGTTTCATAGCACAATCCTGCAGCCATaGGCTCTGATTCTGAAAGAGAGGAGACATGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RMVMFHSTILQP*ALILKERRHGR Trigger: TCTTCCATGTCTCCTCTCTTTCAGAATCAGAGCTCATGGCTGCAGGATTGTGCTATGAAACATCACCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR TCA 72 bp | AAGTGGGGGTTATCTTCTATGTCTATCCAAGAATGGTaGTGTTTCATAGCACAATCCTGCAGCCATGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: KWGLSSMSIQEW*CFIAQSCSHEL Trigger: GAGCTCATGGCTGCAGGATTGTGCTATGAAACATCACCATTCTTGGATAGACATAGAAGATAACCCCCACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000198024.5 |
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| 3UTR GCA 72 bp | AATGCTTTTCTGACTGAATCATCTCTCTGGCTCCCTTaGATGCCTCTCATAATAACTTCCCAACAATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: NAFLTESSLWLP*MPLIITSQQSL Trigger: GAGGGATTGTTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR CCA 72 bp | CTCATGTGCAATGCTTTTCTGACTGAATCATCTCTCTaGCTCCCTTGCATGCCTCTCATAATAACTTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LMCNAFLTESSL*LPCMPLIITSQ Trigger: TTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTGCACATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| 3UTR TCA 72 bp | GGAGTAAGACATTTATTGAAAGTGCTAATAACTCCATaGGCAGACAGAGAACAGCACAGTCAGGCTTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: GVRHLLKVLITP*ADREQHSQALR Trigger: TCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACTTTCAATAAATGTCTTACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000196162.5 ENSMUST00000198024.5 ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | AGTGTGTCAGCCATGCTGGTTCTCCATCCTGACTCTCAGCTGTTCTCTGTGTCCAGCCGGCCCTTGAAGTaGTCATGTATGAAAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: SVSAMLVLHPDSQLFSVSSRPLK*SCMKGM Trigger: CATGCCTTTCATACATGAGCACTTCAAGGGCCGGCT...GGACACAGAGAACAGCTGAGAGTCAGGATGGAGAACCAGCATGGCTGACACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGGCTCAGGATCCATCAAACTCAGGTCCTTCTACTCATGTGCAATGCTTTCTCTTGTCCCTTGTGTaGTCCAGGCCAGCTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLAQDPSNSGPSTHVQCFLLSLV*SRPAVV Trigger: CACCACAGCTGGCCTGGAGCACACAAGGGACAAGAG...AAAGCATTGCACATGAGTAGAAGGACCTGAGTTTGATGGATCCTGAGCCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| CDS-3UTR GCA 90 bp | GCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGCTCTTGTCCCTTGTGTaGTCCAGGCCAGCTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ASEERISEPREYQSLAEVLLSLV*SRPAVV Trigger: CACCACAGCTGGCCTGGAGCACACAAGGGACAAGAG...CACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR TCA 90 bp | GAAAGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGGTGCTTGTGTCAGGGTaGGTTGGGTTCCAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ESANNSMSRQRTAQSGFEVLVSG*VGFQEV Trigger: CACTTCCTGGAACCCAACTCACCCTGACACAAGCAC...CTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR TCA 90 bp | CTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGATTCTTGTGTCAGGGTaGGTTGGGTTCCAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LKREYQNPESIRVWQKWGILVSG*VGFQEV Trigger: CACTTCCTGGAACCCAACTCACCCTGACACAAGAAT...CCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199247.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTATGATCTGAGCCATGGCTaGAGTCTCTCCAGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: RENIRTQRVSESGRSGGYDLSHG*SLSRKR Trigger: TCGCTTCCTGGAGAGACTCCAGCCATGGCTCAGATC...ATAACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CCA 90 bp | AAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTAGCAGGATCTGAGCCATaGCTGGAGTCTCTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KREYQNPESIRVWQKWGLAGSEP*LESLQE Trigger: TTCCTGGAGAGACTCCAGCCATGGCTCAGATCCTGC...TAACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CCA 90 bp | TCAGAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGGCAGGATCTGAGCCATaGCTGGAGTCTCTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SETHSMTWLLKREYQNPEAGSEP*LESLQE Trigger: TTCCTGGAGAGACTCCAGCCATGGCTCAGATCCTGC...CTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR TCA 90 bp | ACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCGTGCTTGTGTCAGGGTaGGTTGGGTTCCAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: THSMTWLLKREYQNPESIVLVSG*VGFQEV Trigger: CACTTCCTGGAACCCAACTCACCCTGACACAAGCAC...GATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR GCA 90 bp | TCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGCTGAATTTCCAGCATaGAGACAGGCTGATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SEERISEPREYQSLAEVGAEFPA*RQADES Trigger: GCTCTCATCAGCCTGTCTGCATGCTGGAAATTCAGC...CCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CCA 90 bp | GAATCAGAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGATCTGAGCCATGGCTaGAGTCTCTCCAGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: ESETHSMTWLLKREYQNPDLSHG*SLSRKR Trigger: TCGCTTCCTGGAGAGACTCCAGCCATGGCTCAGATC...TGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR TCA 90 bp | GAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTTTGGGTTCCAGGAAGTaGCTGCCAAAACTTTATGCC | + |
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Preference number: 4 (lower is better) Translates to: EERISEPREYQSLAEVGVLGSRK*LPKLYA Trigger: GGCATAAAGTTTTGGCAGTCACTTCCTGGAACCCAA...AACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR TCA 90 bp | CAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGCTTCTGAATTGGGTTCCAGGAAGTaGCTGCCAAAACTTTATGCC | + |
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Preference number: 4 (lower is better) Translates to: QHSQALRIRDTQYDLASELGSRK*LPKLYA Trigger: GGCATAAAGTTTTGGCAGTCACTTCCTGGAACCCAA...TTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | AGAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGAGCCGGCCCTTGAAGTaGTCATGTATGAAAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: RDTQYDLASEERISEPRESRPLK*SCMKGM Trigger: CATGCCTTTCATACATGAGCACTTCAAGGGCCGGCT...CTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR CCA 90 bp | CAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTTGTGTCAGGGTGAGTTaGGTTCCAGGAAGTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: QYDLASEERISEPREYQSCVRVS*VPGSDC Trigger: GCAGTCACTTCCTGGAACCCAACTCACCCTGACACA...ACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR TCA 90 bp | GCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGTTGGGTTCCAGGAAGTaGCTGCCAAAACTTTATGCC | + |
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Preference number: 4 (lower is better) Translates to: ASEERISEPREYQSLAEVLGSRK*LPKLYA Trigger: GGCATAAAGTTTTGGCAGTCACTTCCTGGAACCCAA...CACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATTCCCAGGTTCATCAGTaGAGGATTCCTCTTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SANNSMSRQRTAQSGFENSQVHQ*RIPLVP Trigger: AGGGACAAGAGGAATCCTTCACTGATGAACCTGGGA...ATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR TCA 90 bp | CTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGACAATCCTGCAGCCATaGGCTCTGATTCTTGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LLKREYQNPESIRVWQKWTILQP*ALILVS Trigger: TGACACAAGAATCAGAGCTCATGGCTGCAGGATTGT...CCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | TATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGAGCCGGCCCTTGAAGTaGTCATGTATGAAAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: YDLASEERISEPREYQSLSRPLK*SCMKGM Trigger: CATGCCTTTCATACATGAGCACTTCAAGGGCCGGCT...CAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | CATCCCTGGCTCAGGATCCATCAAACTCAGGTCCTTCTACTCATGTGCAATGCTTTTGCAGAAAAACTCTaGAGAAGTACCAGGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: HPWLRIHQTQVLLLMCNAFAEKL*RSTRSG Trigger: ACCAGACCTGGTACTTCTGCAGAGTTTTTCTGCAAA...AGCATTGCACATGAGTAGAAGGACCTGAGTTTGATGGATCCTGAGCCAGGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| CDS-3UTR GCA 90 bp | GAAACTGTCAGTGTGTCAGCCATGCTGGTTCTCCATCCTGACTCTCAGCTGTTCATGCCTTCTGTTGTTTaGAGAAAAACTCTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ETVSVSAMLVLHPDSQLFMPSVV*RKTLQK Trigger: CTTCTGCAGAGTTTTTCTGCAAACAACAGAAGGCAT...GAACAGCTGAGAGTCAGGATGGAGAACCAGCATGGCTGACACACTGACAGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| CDS-3UTR GCA 90 bp | TTTATTGAAAGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCGCTGAATTTCCAGCATaGAGACAGGCTGATGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIESANNSMSRQRTAQSGAEFPA*RQADES Trigger: GCTCTCATCAGCCTGTCTGCATGCTGGAAATTCAGC...GCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACTTTCAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR GCA 90 bp | GAAACTGTCAGTGTGTCAGCCATGCTGGTTCTCCATCCTGACTCTCAGCTGTTCACTGCCAAAACTTTATaGCTTCTGTTGTTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETVSVSAMLVLHPDSQLFTAKTL*LLLFAE Trigger: TTCTGCAAACAACAGAAGGCATAAAGTTTTGGCAGT...GAACAGCTGAGAGTCAGGATGGAGAACCAGCATGGCTGACACACTGACAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164886.2 |
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| CDS-3UTR GCA 90 bp | TGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTTTGCAGAAAAACTCTaGAGAAGTACCAGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLKREYQNPESIRVWQKFAEKL*RSTRSG Trigger: ACCAGACCTGGTACTTCTGCAGAGTTTTTCTGCAAA...CTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | CAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGCTTCTGAAATGCCTTCTGTTGTTTaGAGAAAAACTCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHSQALRIRDTQYDLASEMPSVV*RKTLQK Trigger: CTTCTGCAGAGTTTTTCTGCAAACAACAGAAGGCAT...TTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR TCA 90 bp | ACATTTATTGAAAGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCATCCCAGGTTCATCAGTaGAGGATTCCTCTTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFIESANNSMSRQRTAQSSQVHQ*RIPLVP Trigger: AGGGACAAGAGGAATCCTTCACTGATGAACCTGGGA...TGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACTTTCAATAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR GCA 90 bp | ACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGTTTGCAGAAAAACTCTaGAGAAGTACCAGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQYDLASEERISEPREYQFAEKL*RSTRSG Trigger: ACCAGACCTGGTACTTCTGCAGAGTTTTTCTGCAAA...CTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | GAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATGCCTTCTGTTGTTTaGAGAAAAACTCTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ETHSMTWLLKREYQNPESMPSVV*RKTLQK Trigger: CTTCTGCAGAGTTTTTCTGCAAACAACAGAAGGCAT...ACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR TCA 90 bp | ACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCTCTATCCAAGAATGGTaGTGTTTCATAGCACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: THSMTWLLKREYQNPESISIQEW*CFIAQS Trigger: GGATTGTGCTATGAAACATCACCATTCTTGGATAGA...GATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | TGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGACTGCCAAAACTTTATaGCTTCTGTTGTTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLLKREYQNPESIRVWQKTAKTL*LLLFAE Trigger: TTCTGCAAACAACAGAAGGCATAAAGTTTTGGCAGT...CTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR GCA 90 bp | ACATTTATTGAAAGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAACTGCCAAAACTTTATaGCTTCTGTTGTTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFIESANNSMSRQRTAQSTAKTL*LLLFAE Trigger: TTCTGCAAACAACAGAAGGCATAAAGTTTTGGCAGT...TGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACTTTCAATAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS TCA 90 bp | GAATTTCCAGCATGCAGACAGGCTGATGAGAGCAGAAGCAGGATCTaGGCCATGGCTGGAGTCTCTCCAGGAAGCGAGATCAGCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EFPACRQADESRSRI*AMAGVSPGSEISKA Trigger: GGCTTTGCTGATCTCGCTTCCTGGAGAGACTCCAGCCATGGCTCAGATCCTGCTTCTGCTCTCATCAGCCTGTCTGCATGCTGGAAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS TCA 90 bp | TGTCGATGGAGCCACCCTGGACTCCAGAGCAGCGTTCAGGTTGGTTaGCCCCAAAGTCATTTCCTCCGTTTGATCTTGCTGAATTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRWSHPGLQSSVQVG*PQSHFLRLILLNFQ Trigger: CTGGAAATTCAGCAAGATCAAACGGAGGAAATGACTTTGGGGTCAACCAACCTGAACGCTGCTCTGGAGTCCAGGGTGGCTCCATCGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS TCA 90 bp | TGGTCAGACTCCTTAAAGTTCAGGATTCTGAGGACTCCAGATGTCTaGCCCTGTGTCCAGTTCAGGATGAGCCGGCCCTTGAAGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WSDSLKFRILRTPDV*PCVQFRMSRPLKCS Trigger: TGAGCACTTCAAGGGCCGGCTCATCCTGAACTGGACACAGGGTCAGACATCTGGAGTCCTCAGAATCCTGAACTTTAAGGAGTCTGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS TCA 90 bp | TGTCGATGGAGCCACCCTGGACTCCAGAGCAGCGTTCAGGTTGGTTaGCCCCAAAGTCATTTCCTCCGTTTGATCTTGCTGAATTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CRWSHPGLQSSVQVG*PQSHFLRLILLNFL Trigger: CAGGAAATTCAGCAAGATCAAACGGAGGAAATGACTTTGGGGTCAACCAACCTGAACGCTGCTCTGGAGTCCAGGGTGGCTCCATCGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199773.2 |
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| CDS-3UTR CAA 90 bp | CAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGCTTCTGAAGATTCCTCTTGTCCCTaGTGTGCTCCAGGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QHSQALRIRDTQYDLASEDSSCP*CAPGQL Trigger: CAGCTGGCCTGGAGCACACAAGGGACAAGAGGAATC...TTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CAA 90 bp | CTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGATTCCTCTTGTCCCTaGTGTGCTCCAGGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LASEERISEPREYQSLAEDSSCP*CAPGQL Trigger: CAGCTGGCCTGGAGCACACAAGGGACAAGAGGAATC...TTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CAA 90 bp | CTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGAGAGCAGCGTTCAGGTaGGTTGACCCCAAAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LKREYQNPESIRVWQKWGRAAFR*VDPKVI Trigger: AATGACTTTGGGGTCAACCAACCTGAACGCTGCTCT...CCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGAGGATGAGCCGGCCCTaGAAGTGCTCATGTATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLKREYQNPESIRVWQKWRMSRP*KCSCMK Trigger: TTTCATACATGAGCACTTCAAGGGCCGGCTCATCCT...CCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR CAA 90 bp | GCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGAGGATGAGCCGGCCCTaGAAGTGCTCATGTATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ANNSMSRQRTAQSGFENQRMSRP*KCSCMK Trigger: TTTCATACATGAGCACTTCAAGGGCCGGCTCATCCT...CTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS TCA 90 bp | GGTGGTGTTGAGTGCTTGTGTCAGGGTGAGTTGGGTTCCAGGAAGTaGCTGCCAAAACTTTATGCCTTCTGTTGTTTGCAGAAAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGVECLCQGELGSRK*LPKLYAFCCLQKNS Trigger: AGAGTTTTTCTGCAAACAACAGAAGGCATAAAGTTTTGGCAGTCACTTCCTGGAACCCAACTCACCCTGACACAAGCACTCAACACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CAA 90 bp | CAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATAAGGATGAGCCGGCCCTaGAAGTGCTCATGTATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QALRIRDTQYDLASEERIRMSRP*KCSCMK Trigger: TTTCATACATGAGCACTTCAAGGGCCGGCTCATCCT...TATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS CCA 90 bp | ATGCCTTCTGTTGTTTGCAGAAAAACTCTGCAGAAGTACCAGGTCTaGTCAGACTCCTTAAAGTTCAGGATTCTGAGGACTCCAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: MPSVVCRKTLQKYQV*SDSLKFRILRTPDV Trigger: GACATCTGGAGTCCTCAGAATCCTGAACTTTAAGGAGTCTGACCAGACCTGGTACTTCTGCAGAGTTTTTCTGCAAACAACAGAAGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR CAA 90 bp | TATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGTTCCTCCGTTTGATCTaGCTGAATTTCCAGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: YDLASEERISEPREYQSLFLRLI*LNFQHA Trigger: TGCATGCTGGAAATTCAGCAAGATCAAACGGAGGAA...CAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CAA 90 bp | GAGACACACAGTATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTAGTCATTTCCTCCGTTaGATCTTGCTGAATTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ETHSMTWLLKREYQNPESSHFLR*ILLNFQ Trigger: CTGGAAATTCAGCAAGATCAAACGGAGGAAATGACT...ACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATACTGTGTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTATAGTCATTTCCTCCGTTaGATCTTGCTGAATTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RENIRTQRVSESGRSGGYSHFLR*ILLNFQ Trigger: CTGGAAATTCAGCAAGATCAAACGGAGGAAATGACT...ATAACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS-3UTR CAA 90 bp | CAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGCTTCTGAAACTTTATGCCTTCTGTaGTTTGCAGAAAAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QHSQALRIRDTQYDLASETLCLL*FAEKLC Trigger: GCAGAGTTTTTCTGCAAACAACAGAAGGCATAAAGT...TTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR CAA 90 bp | TATGACCTGGCTTCTGAAGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGACTTTATGCCTTCTGTaGTTTGCAGAAAAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YDLASEERISEPREYQSLTLCLL*FAEKLC Trigger: GCAGAGTTTTTCTGCAAACAACAGAAGGCATAAAGT...CAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCTTCAGAAGCCAGGTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATACTTTATGCCTTCTGTaGTTTGCAGAAAAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SANNSMSRQRTAQSGFENTLCLL*FAEKLC Trigger: GCAGAGTTTTTCTGCAAACAACAGAAGGCATAAAGT...ATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS-3UTR CAA 90 bp | ACATTTATTGAAAGTGCTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCATTCCTCCGTTTGATCTaGCTGAATTTCCAGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TFIESANNSMSRQRTAQSFLRLI*LNFQHA Trigger: TGCATGCTGGAAATTCAGCAAGATCAAACGGAGGAA...TGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAGCACTTTCAATAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS TCA 72 bp | GCATGCAGACAGGCTGATGAGAGCAGAAGCAGGATCTaGGCCATGGCTGGAGTCTCTCCAGGAAGCGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: ACRQADESRSRI*AMAGVSPGSEI Trigger: GATCTCGCTTCCTGGAGAGACTCCAGCCATGGCTCAGATCCTGCTTCTGCTCTCATCAGCCTGTCTGCATGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199773.2 |
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| CDS CAA 72 bp | ACCATGGCTCCCAGGTTCATCAGTGAAGGATTCCTCTaGTCCCTTGTGTGCTCCAGGCCAGCTGTGGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TMAPRFISEGFL*SLVCSRPAVVN Trigger: ATTCACCACAGCTGGCCTGGAGCACACAAGGGACAAGAGGAATCCTTCACTGATGAACCTGGGAGCCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS TCA 72 bp | TCCTTAAAGTTCAGGATTCTGAGGACTCCAGATGTCTaGCCCTGTGTCCAGTTCAGGATGAGCCGGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLKFRILRTPDV*PCVQFRMSRPL Trigger: CAAGGGCCGGCTCATCCTGAACTGGACACAGGGTCAGACATCTGGAGTCCTCAGAATCCTGAACTTTAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS GCA 72 bp | AGGTTCATCAGTGAAGGATTCCTCTTGTCCCTTGTGTaGTCCAGGCCAGCTGTGGTGAATTCAGAGGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: RFISEGFLLSLV*SRPAVVNSEVT Trigger: CGTCACCTCTGAATTCACCACAGCTGGCCTGGAGCACACAAGGGACAAGAGGAATCCTTCACTGATGAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS CAA 90 bp | ATGTCGATGGAGCCACCCTGGACTCCAGAGCAGCGTTCAGGTTGGTaGACCCCAAAGTCATTTCCTCCGTTTGATCTTGCTGAATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MSMEPPWTPEQRSGW*TPKSFPPFDLAEFP Trigger: TGGAAATTCAGCAAGATCAAACGGAGGAAATGACTTTGGGGTCAACCAACCTGAACGCTGCTCTGGAGTCCAGGGTGGCTCCATCGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
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| CDS CAA 90 bp | ATGTCGATGGAGCCACCCTGGACTCCAGAGCAGCGTTCAGGTTGGTaGACCCCAAAGTCATTTCCTCCGTTTGATCTTGCTGAATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MSMEPPWTPEQRSGW*TPKSFPPFDLAEFP Trigger: AGGAAATTCAGCAAGATCAAACGGAGGAAATGACTTTGGGGTCAACCAACCTGAACGCTGCTCTGGAGTCCAGGGTGGCTCCATCGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199773.2 |
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| CDS CCA 72 bp | CTCATGGTGGTGTTGAGTGCTTGTGTCAGGGTGAGTTaGGTTCCAGGAAGTGACTGCCAAAACTTTATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LMVVLSACVRVS*VPGSDCQNFMP Trigger: AGGCATAAAGTTTTGGCAGTCACTTCCTGGAACCCAACTCACCCTGACACAAGCACTCAACACCACCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
||
| CDS TCA 72 bp | GAGTGCTTGTGTCAGGGTGAGTTGGGTTCCAGGAAGTaGCTGCCAAAACTTTATGCCTTCTGTTGTTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ECLCQGELGSRK*LPKLYAFCCLQ Trigger: CTGCAAACAACAGAAGGCATAAAGTTTTGGCAGTCACTTCCTGGAACCCAACTCACCCTGACACAAGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 |
||
| CDS CCA 72 bp | GTTGTTTGCAGAAAAACTCTGCAGAAGTACCAGGTCTaGTCAGACTCCTTAAAGTTCAGGATTCTGAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: VVCRKTLQKYQV*SDSLKFRILRT Trigger: AGTCCTCAGAATCCTGAACTTTAAGGAGTCTGACCAGACCTGGTACTTCTGCAGAGTTTTTCTGCAAACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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| CDS CAA 72 bp | TTCCAGGAAGTGACTGCCAAAACTTTATGCCTTCTGTaGTTTGCAGAAAAACTCTGCAGAAGTACCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FQEVTAKTLCLL*FAEKLCRSTRS Trigger: AGACCTGGTACTTCTGCAGAGTTTTTCTGCAAACAACAGAAGGCATAAAGTTTTGGCAGTCACTTCCTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164886.2 ENSMUST00000196162.5 ENSMUST00000199247.2 |
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