Pregenerated sensors for PILRB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066684Ensembl transcript IDs: ENSMUST00000110978.7, ENSMUST00000196195.2, ENSMUST00000197914.5, ENSMUST00000198703.2, ENSMUST00000199387.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAACAACCCCTCAGCTGTCCCTTGGGATGGCAAGCACTCACCTTaGTGGGGTTTAGGCTTTAGTGTGCTGGCCTGTAGGAGAAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: PNNPSAVPWDGKHSP*WGLGFSVLACRRRN Trigger: GTTTCTTCTCCTACAGGCCAGCACACTAAAGCCTAAACCCCAGCAAGGTGAGTGCTTGCCATCCCAAGGGACAGCTGAGGGGTTGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 90 bp | AACAACCCCTCAGCTGTCCCTTGGGATGGCAAGCACTCACCTTGCTaGGGTTTAGGCTTTAGTGTGCTGGCCTGTAGGAGAAGAAACTGT | + |
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Preference number: 1 (lower is better) Translates to: NNPSAVPWDGKHSPC*GLGFSVLACRRRNC Trigger: ACAGTTTCTTCTCCTACAGGCCAGCACACTAAAGCCTAAACCCCAGCAAGGTGAGTGCTTGCCATCCCAAGGGACAGCTGAGGGGTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 90 bp | GTCTCTTTGTACCATTTGGGTCCCCAGGAATCCCATCCAGGTCATTaGGCTAGGTGGCAGGCTCCATTTCTCACTGAGCTATCTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: VSLYHLGPQESHPGH*ARWQAPFLTELSHW Trigger: CCAGTGAGATAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGGATTCCTGGGGACCCAAATGGTACAAAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 90 bp | TACCATTTGGGTCCCCAGGAATCCCATCCAGGTCATTGGGCTAGGTaGCAGGCTCCATTTCTCACTGAGCTATCTCACTGGTACACACTA | + |
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Preference number: 1 (lower is better) Translates to: YHLGPQESHPGHWAR*QAPFLTELSHWYTL Trigger: TAGTGTGTACCAGTGAGATAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGGATTCCTGGGGACCCAAATGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR GCA 90 bp | CCCACGCGAAATGCTTTTCTGACTGAATCATCTCTCTGGCTCCCTTaGATGCCTCTCATAATAACTTCCCAACAACCCCTCAGCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: PTRNAFLTESSLWLP*MPLIITSQQPLSCP Trigger: GGGACAGCTGAGGGGTTGTTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTTCGCGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR GCA 90 bp | ACTCTGCCTGTCTCTTCCTTGACCAGGGATGTGATTATAAATTCCTaGCACATCCCTGGCTCAGGATCCATCAAACTCAGGTCCTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: TLPVSSLTRDVIINS*HIPGSGSIKLRSFY Trigger: GTAGAAGGACCTGAGTTTGATGGATCCTGAGCCAGGGATGTGGCAGGAATTTATAATCACATCCCTGGTCAAGGAAGAGACAGGCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 90 bp | GATGTTTCACAGCACAATCCTGCAGCCATGAGCTCTGATTCTTGCTaGGGTTTAGGCTTTAGTGTGCTGGCCTGTAGGAGAAGAAACTGT | + |
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Preference number: 1 (lower is better) Translates to: DVSQHNPAAMSSDSC*GLGFSVLACRRRNC Trigger: ACAGTTTCTTCTCCTACAGGCCAGCACACTAAAGCCTAAACCCCAGCAAGAATCAGAGCTCATGGCTGCAGGATTGTGCTGTGAAACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197914.5 |
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| 3UTR CCA 90 bp | GTCCTTCTACCCACGCGAAATGCTTTTCTGACTGAATCATCTCTCTaGCTCCCTTGCATGCCTCTCATAATAACTTCCCAACAACCCCTC | + |
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Preference number: 1 (lower is better) Translates to: VLLPTRNAFLTESSL*LPCMPLIITSQQPL Trigger: GAGGGGTTGTTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTTCGCGTGGGTAGAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CAA 90 bp | GGGAGCCTGTGTGTGACCCTGAGACGTAGAGGACAATCGCCCAGATaGAGTTGTCTCTTTGTACCATTTGGGTCCCCAGGAATCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GSLCVTLRRRGQSPR*SCLFVPFGSPGIPS Trigger: GGATGGGATTCCTGGGGACCCAAATGGTACAAAGAGACAACTCAATCTGGGCGATTGTCCTCTACGTCTCAGGGTCACACACAGGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACTGTCAGTGTATCAGCCATGCTGGTTCTCCATCCTGACTCTCAGCTGTTGCAGCCATGAGCTCTaGTTCTTGCTGGGGTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: KKLSVYQPCWFSILTLSCCSHEL*FLLGFR Trigger: CCTAAACCCCAGCAAGAATCAGAGCTCATGGCTGCA...ACAGCTGAGAGTCAGGATGGAGAACCAGCATGGCTGATACACTGACAGTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197914.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGATGTGATTATAAATTCCTGCCACATCCCTGGCTCAGGATCCATCAAACTAGCTGTCCCTTGGGATaGCAAGCACTCACCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QGCDYKFLPHPWLRIHQTSCPLG*QALTLL Trigger: CAGCAAGGTGAGTGCTTGCCATCCCAAGGGACAGCT...AGTTTGATGGATCCTGAGCCAGGGATGTGGCAGGAATTTATAATCACATCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTAACAATCCTGCAGCCATaGGCTCTGATTCTTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: MSRQRTAQSGFENQRHTVTILQP*ALILAG Trigger: CCCAGCAAGAATCAGAGCTCATGGCTGCAGGATTGT...TACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000197914.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGTATCAGAGTCTGGCAGAAGTGGGGGTTATCTTCTATGTCTATCCAAGAATTGCAGCCATGAGCTCTaGTTCTTGCTGGGGTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: RVSESGRSGGYLLCLSKNCSHEL*FLLGFR Trigger: CCTAAACCCCAGCAAGAATCAGAGCTCATGGCTGCA...ATTCTTGGATAGACATAGAAGATAACCCCCACTTCTGCCAGACTCTGATACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000197914.5 |
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| 3UTR-3UTR GCA 90 bp | GTTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGGGCAAGCACTCACCTTaGTGGGGTTTAGGCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: VNNSMSRQRTAQSGFENQGKHSP*WGLGFS Trigger: ACTAAAGCCTAAACCCCAGCAAGGTGAGTGCTTGCC...CTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR-3UTR TCA 90 bp | AACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGAGACACTCTATCCAAGAATGGTaGTGTTTCACAGCACAATCC | + |
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Preference number: 2 (lower is better) Translates to: NSMSRQRTAQSGFENQRHSIQEW*CFTAQS Trigger: GGATTGTGCTGTGAAACATCACCATTCTTGGATAGA...GTGTCTCTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000197914.5 ENSMUST00000199387.2 |
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| 3UTR-3UTR TCA 90 bp | CTATCCAAGAATGGTGATGTTTCACAGCACAATCCTGCAGCCATGAGCTCTGATTCTATCCAAGAATGGTaGTGTTTCACAGCACAATCC | + |
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Preference number: 2 (lower is better) Translates to: LSKNGDVSQHNPAAMSSDSIQEW*CFTAQS Trigger: GGATTGTGCTGTGAAACATCACCATTCTTGGATAGA...ATCAGAGCTCATGGCTGCAGGATTGTGCTGTGAAACATCACCATTCTTGGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000197914.5 ENSMUST00000199387.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGACACACAGTATGACCTaGCTTCTGAGGAGAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: VNNSMSRQRTAQSGFENQTHSMT*LLRREY Trigger: ATATTCTCTCCTCAGAAGCCAGGTCATACTGTGTGT...CTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110978.7 ENSMUST00000197914.5 ENSMUST00000198703.2 ENSMUST00000199387.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATATGAGCTCTGATTCTTaGTGGGGTTTAGGCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: SVNNSMSRQRTAQSGFENMSSDS*WGLGFS Trigger: ACTAAAGCCTAAACCCCAGCAAGAATCAGAGCTCAT...ATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197914.5 |
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| 3UTR GCA 72 bp | CCCTCAGCTGTCCCTTGGGATGGCAAGCACTCACCTTaGTGGGGTTTAGGCTTTAGTGTGCTGGCCTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: PSAVPWDGKHSP*WGLGFSVLACR Trigger: CCTACAGGCCAGCACACTAAAGCCTAAACCCCAGCAAGGTGAGTGCTTGCCATCCCAAGGGACAGCTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 72 bp | GGTCCCCAGGAATCCCATCCAGGTCATTGGGCTAGGTaGCAGGCTCCATTTCTCACTGAGCTATCTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: GPQESHPGHWAR*QAPFLTELSHW Trigger: CCAGTGAGATAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGGATTCCTGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 72 bp | TCAGCTGTCCCTTGGGATGGCAAGCACTCACCTTGCTaGGGTTTAGGCTTTAGTGTGCTGGCCTGTAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SAVPWDGKHSPC*GLGFSVLACRR Trigger: TCTCCTACAGGCCAGCACACTAAAGCCTAAACCCCAGCAAGGTGAGTGCTTGCCATCCCAAGGGACAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 72 bp | TACCATTTGGGTCCCCAGGAATCCCATCCAGGTCATTaGGCTAGGTGGCAGGCTCCATTTCTCACTGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: YHLGPQESHPGH*ARWQAPFLTEL Trigger: TAGCTCAGTGAGAAATGGAGCCTGCCACCTAGCCCAATGACCTGGATGGGATTCCTGGGGACCCAAATGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 72 bp | CAGCACAATCCTGCAGCCATGAGCTCTGATTCTTGCTaGGGTTTAGGCTTTAGTGTGCTGGCCTGTAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QHNPAAMSSDSC*GLGFSVLACRR Trigger: TCTCCTACAGGCCAGCACACTAAAGCCTAAACCCCAGCAAGAATCAGAGCTCATGGCTGCAGGATTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197914.5 |
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| 3UTR TCA 72 bp | AAACTCAGGTCCTTCTACCCACGCGAAATGCTTTTCTaGCTGAATCATCTCTCTGGCTCCCTTGCATGCCTC | + |
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Preference number: 3 (lower is better) Translates to: KLRSFYPREMLF*LNHLSGSLACL Trigger: GAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTTCGCGTGGGTAGAAGGACCTGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 72 bp | ACAATCGCCCAGATTGAGTTGTCTCTTTGTACCATTTaGGTCCCCAGGAATCCCATCCAGGTCATTGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: TIAQIELSLCTI*VPRNPIQVIGL Trigger: TAGCCCAATGACCTGGATGGGATTCCTGGGGACCCAAATGGTACAAAGAGACAACTCAATCTGGGCGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CCA 72 bp | CCCACGCGAAATGCTTTTCTGACTGAATCATCTCTCTaGCTCCCTTGCATGCCTCTCATAATAACTTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: PTRNAFLTESSL*LPCMPLIITSQ Trigger: TTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATTTCGCGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR TCA 72 bp | AAGTGGGGGTTATCTTCTATGTCTATCCAAGAATGGTaGTGTTTCACAGCACAATCCTGCAGCCATGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: KWGLSSMSIQEW*CFTAQSCSHEL Trigger: GAGCTCATGGCTGCAGGATTGTGCTGTGAAACATCACCATTCTTGGATAGACATAGAAGATAACCCCCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000197914.5 ENSMUST00000199387.2 |
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| 3UTR TCA 72 bp | AGAATGGTGATGTTTCACAGCACAATCCTGCAGCCATaGGCTCTGATTCTGAAAGAGAGGAGACATGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RMVMFHSTILQP*ALILKERRHGR Trigger: TCTTCCATGTCTCCTCTCTTTCAGAATCAGAGCTCATGGCTGCAGGATTGTGCTGTGAAACATCACCATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR GCA 72 bp | AATGCTTTTCTGACTGAATCATCTCTCTGGCTCCCTTaGATGCCTCTCATAATAACTTCCCAACAACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: NAFLTESSLWLP*MPLIITSQQPL Trigger: GAGGGGTTGTTGGGAAGTTATTATGAGAGGCATGCAAGGGAGCCAGAGAGATGATTCAGTCAGAAAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR TCA 72 bp | GGAGTAAGACATTTATTGAAAGTGTTAATAACTCCATaGGCAGACAGAGAACAGCACAGTCAGGCTTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: GVRHLLKVLITP*ADREQHSQALR Trigger: TCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAACACTTTCAATAAATGTCTTACTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000197914.5 ENSMUST00000198703.2 |
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| CDS-3UTR TCA 90 bp | GCCATGCTGGTTCTCCATCCTGACTCTCAGCTGTTCTCTGTGTCCGGACAACGTAGCAGAAGCAGGACCTaGGCCATGGCTGGAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: AMLVLHPDSQLFSVSGQRSRSRT*AMAGVP Trigger: AGGGACTCCAGCCATGGCTCAGGTCCTGCTTCTGCT...ACGTTGTCCGGACACAGAGAACAGCTGAGAGTCAGGATGGAGAACCAGCATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTTCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAACTCTGGTCGCTTGTGTaGTCCAGGCCAGCTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LASEERISEPREYQSLAELWSLV*SRPAVV Trigger: CACCACAGCTGGCCTGGAGCACACAAGCGACCAGAG...TTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGAAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CCA 90 bp | GACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGACCTGAGCCATGGCTaGAGTCCCTCCAGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: DREQHSQALRIRDTQYDLDLSHG*SPSRKR Trigger: TCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGGTC...CAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| 3UTR CAA 72 bp | CTCATAATAACTTCCCAACAACCCCTCAGCTGTCCCTaGGGATGGCAAGCACTCACCTTGCTGGGGTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LIITSQQPLSCP*GWQALTLLGFR Trigger: CCTAAACCCCAGCAAGGTGAGTGCTTGCCATCCCAAGGGACAGCTGAGGGGTTGTTGGGAAGTTATTATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | ATTGAGTTGTCTCTTTGTACCATTTGGGTCCCCAGGAATCCCATCCAGGTCATTCTCTGGTCGCTTGTGTaGTCCAGGCCAGCTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: IELSLCTIWVPRNPIQVILWSLV*SRPAVV Trigger: CACCACAGCTGGCCTGGAGCACACAAGCGACCAGAG...AATGACCTGGATGGGATTCCTGGGGACCCAAATGGTACAAAGAGACAACTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR CCA 90 bp | AGTCAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGCTTCTGAGGAGAGATCGATGGAGCCACCCTaGACTCCAGAGCAGCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SQALRIRDTQYDLASEERSMEPP*TPEQRS Trigger: TGAACGCTGCTCTGGAGTCCAGGGTGGCTCCATCGA...TCTCTCCTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR TCA 90 bp | TATCAGAGTCTGGCAGAAGTGGGGGTTATCTTCTATGTCTATCCAAGAATGGTGAGCAGAAGCAGGACCTaGGCCATGGCTGGAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: YQSLAEVGVIFYVYPRMVSRSRT*AMAGVP Trigger: AGGGACTCCAGCCATGGCTCAGGTCCTGCTTCTGCT...CACCATTCTTGGATAGACATAGAAGATAACCCCCACTTCTGCCAGACTCTGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTATAGGACTCCAGATGTCTaGCCCTGTGTCCAGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GENIRTQRVSESGRSGGYRTPDV*PCVQFR Trigger: CCTGAACTGGACACAGGGTCAGACATCTGGAGTCCT...ATAACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| 3UTR CAA 72 bp | TGTGTGACCCTGAGACGTAGAGGACAATCGCCCAGATaGAGTTGTCTCTTTGTACCATTTGGGTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CVTLRRRGQSPR*SCLFVPFGSPG Trigger: TCCTGGGGACCCAAATGGTACAAAGAGACAACTCAATCTGGGCGATTGTCCTCTACGTCTCAGGGTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | CTTCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGCAGGGTCAGGTCTTTaGTTCCACCTCAGGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: LLRREYQNPESIRVWQKWAGSGL*FHLRKI Trigger: GATCTTCCTGAGGTGGAAGCAAAGACCTGACCCTGC...CCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197914.5 ENSMUST00000199387.2 |
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| CDS-3UTR CCA 90 bp | GGGGTTATCTTCTATGTCTATCCAAGAATGGTGATGTTTCACAGCACAATCCTGGACCTGAGCCATGGCTaGAGTCCCTCCAGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GVIFYVYPRMVMFHSTILDLSHG*SPSRKR Trigger: TCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGGTC...CAGGATTGTGCTGTGAAACATCACCATTCTTGGATAGACATAGAAGATAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CCA 90 bp | GTATCAGAGTCTGGCAGAAGTGGGGGTTATCTTCTATGTCTATCCAAGAATGGTTCGATGGAGCCACCCTaGACTCCAGAGCAGCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: VSESGRSGGYLLCLSKNGSMEPP*TPEQRS Trigger: TGAACGCTGCTCTGGAGTCCAGGGTGGCTCCATCGA...ACCATTCTTGGATAGACATAGAAGATAACCCCCACTTCTGCCAGACTCTGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | GCTAGGTGGCAGGCTCCATTTCTCACTGAGCTATCTCACTGGTACACACTACTTTCTGAATTTCCAGCATaGAGACAGCCTGATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ARWQAPFLTELSHWYTLLSEFPA*RQPDES Trigger: GCTCTCATCAGGCTGTCTGCATGCTGGAAATTCAGA...AAGTAGTGTGTACCAGTGAGATAGCTCAGTGAGAAATGGAGCCTGCCACCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | ACCTTTTCTTCTATGCTAAGTGGAGATCCATCCCATGACTCTGCCTGTCTCTTCGCAGGGTCAGGTCTTTaGTTCCACCTCAGGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: TFSSMLSGDPSHDSACLFAGSGL*FHLRKI Trigger: GATCTTCCTGAGGTGGAAGCAAAGACCTGACCCTGC...GAAGAGACAGGCAGAGTCATGGGATGGATCTCCACTTAGCATAGAAGAAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| 3UTR CAA 72 bp | GTGGAGATCCATCCCATGACTCTGCCTGTCTCTTCCTaGACCAGGGATGTGATTATAAATTCCTGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: VEIHPMTLPVSS*TRDVIINSCHI Trigger: GATGTGGCAGGAATTTATAATCACATCCCTGGTCAAGGAAGAGACAGGCAGAGTCATGGGATGGATCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | GCTTCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGTCTGAATTTCCAGCATaGAGACAGCCTGATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ASEERISEPREYQSLAEVSEFPA*RQPDES Trigger: GCTCTCATCAGGCTGTCTGCATGCTGGAAATTCAGA...CACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | CTTGACCAGGGATGTGATTATAAATTCCTGCCACATCCCTGGCTCAGGATCCATTCCATTTCCAGGCTATaGTCATCTGTGGATCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LDQGCDYKFLPHPWLRIHSISRL*SSVDPW Trigger: CCAAGGATCCACAGATGAGCATAGCCTGGAAATGGA...ATGGATCCTGAGCCAGGGATGTGGCAGGAATTTATAATCACATCCCTGGTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR TCA 90 bp | AATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGAGAACAATCCTGCAGCCATaGGCTCTGATTCTTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NNSMSRQRTAQSGFENQRTILQP*ALILGS Trigger: TGACCCAAGAATCAGAGCTCATGGCTGCAGGATTGT...TCTCTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198703.2 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTATCCATTTCCAGGCTATaGTCATCTGTGGATCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: MSRQRTAQSGFENQRHTVSISRL*SSVDPW Trigger: CCAAGGATCCACAGATGAGCATAGCCTGGAAATGGA...TACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR GCA 90 bp | AAGAATGGTGATGTTTCACAGCACAATCCTGCAGCCATGAGCTCTGATTCTTGCACTGCCACAACTTCATaGCTTCTGTCGACTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: KNGDVSQHNPAAMSSDSCTATTS*LLSTAD Trigger: ATCTGCAGTCGACAGAAGGCATGAAGTTGTGGCAGT...GCAAGAATCAGAGCTCATGGCTGCAGGATTGTGCTGTGAAACATCACCATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110978.7 |
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| CDS-3UTR CCA 90 bp | AGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTACTAAAGTACTGGGCTTaGTCAGACTCCTTCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RREYQNPESIRVWQKWGLLKYWA*SDSFKF Trigger: GAACTTGAAGGAGTCTGACCAAGCCCAGTACTTTAG...TAACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR TCA 90 bp | CTGGCTTCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAATCTATCCAAGAATGGTaGTGTTTCACAGCACAATCC | + |
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Preference number: 4 (lower is better) Translates to: LASEERISEPREYQSLAESIQEW*CFTAQS Trigger: GGATTGTGCTGTGAAACATCACCATTCTTGGATAGA...TTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGAAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198703.2 |
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| CDS-3UTR TCA 90 bp | GCTTCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGTCTGTTGTATCTTTCTaGATTTCCAGCATGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: ASEERISEPREYQSLAEVSVVSF*ISSMQT Trigger: TGTCTGCATGCTGGAAATTCAGAAAGATACAACAGA...CACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR TCA 90 bp | GCAGAAGTGGGGGTTATCTTCTATGTCTATCCAAGAATGGTGATGTTTCACAGCTCTGTTGTATCTTTCTaGATTTCCAGCATGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: AEVGVIFYVYPRMVMFHSSVVSF*ISSMQT Trigger: TGTCTGCATGCTGGAAATTCAGAAAGATACAACAGA...GCTGTGAAACATCACCATTCTTGGATAGACATAGAAGATAACCCCCACTTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS TCA 90 bp | GAAGCCACAGCATGCAGACAGCCTGATGAGAGCAGAAGCAGGACCTaGGCCATGGCTGGAGTCCCTCCAGGAAGCGAGATCAGCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: EATACRQPDESRSRT*AMAGVPPGSEISKA Trigger: GGCTTTGCTGATCTCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGGTCCTGCTTCTGCTCTCATCAGGCTGTCTGCATGCTGTGGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196195.2 |
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| CDS TCA 90 bp | GAATTTCCAGCATGCAGACAGCCTGATGAGAGCAGAAGCAGGACCTaGGCCATGGCTGGAGTCCCTCCAGGAAGCGAGATCAGCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: EFPACRQPDESRSRT*AMAGVPPGSEISKA Trigger: GGCTTTGCTGATCTCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGGTCCTGCTTCTGCTCTCATCAGGCTGTCTGCATGCTGGAAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | TCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGAGAGCAGCGTTCAGGTaGGTTGACCCCAAAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: SEERISEPREYQSLAEVGRAAFR*VDPKAI Trigger: AATGGCTTTGGGGTCAACCAACCTGAACGCTGCTCT...CCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGGTTGGGTTCCAGGAATaGACTGCCACAACTTCATGC | + |
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Preference number: 5 (lower is better) Translates to: LRREYQNPESIRVWQKWGVGFQE*TATTSC Trigger: GCATGAAGTTGTGGCAGTCAATTCCTGGAACCCAAC...CCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000198703.2 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTGGAGATCCATCCCATGACTCTGCCTGTCTCTTCCTTGACCAGGGATGTGTTGGGTTCCAGGAATaGACTGCCACAACTTCATGC | + |
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Preference number: 5 (lower is better) Translates to: LSGDPSHDSACLFLDQGCVGFQE*TATTSC Trigger: GCATGAAGTTGTGGCAGTCAATTCCTGGAACCCAAC...ACATCCCTGGTCAAGGAAGAGACAGGCAGAGTCATGGGATGGATCTCCACTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTTCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGGTGGTGTTGAGTGCTaGGGTCACGTTGAGTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: LASEERISEPREYQSLAEGGVEC*GHVELG Trigger: ACCCAACTCAACGTGACCCAAGCACTCAACACCACC...TTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGAAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | CTATCCAAGAATGGTGATGTTTCACAGCACAATCCTGCAGCCATGAGCTCTGATGGTGGTGTTGAGTGCTaGGGTCACGTTGAGTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: LSKNGDVSQHNPAAMSSDGGVEC*GHVELG Trigger: ACCCAACTCAACGTGACCCAAGCACTCAACACCACC...ATCAGAGCTCATGGCTGCAGGATTGTGCTGTGAAACATCACCATTCTTGGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCTTTGAGAATCAGAGACACACAGTATGACCTGGCTTCTGAGGAGAGAAGTGCTTGGGTCACGTaGAGTTGGGTTCCAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: SQALRIRDTQYDLASEERSAWVT*SWVPGI Trigger: AATTCCTGGAACCCAACTCAACGTGACCCAAGCACT...TCTCTCCTCAGAAGCCAGGTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTTCTGAGGAGAGAATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAAGTGCTTGGGTCACGTaGAGTTGGGTTCCAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: LASEERISEPREYQSLAESAWVT*SWVPGI Trigger: AATTCCTGGAACCCAACTCAACGTGACCCAAGCACT...TTCTGCCAGACTCTGATACTCTCTGGGTTCTGATATTCTCTCCTCAGAAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | GGGGGTTATCTTCTATGTCTATCCAAGAATGGTGATGTTTCACAGCACAATCCTAGAGCAGCGTTCAGGTaGGTTGACCCCAAAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: GGYLLCLSKNGDVSQHNPRAAFR*VDPKAI Trigger: AATGGCTTTGGGGTCAACCAACCTGAACGCTGCTCT...AGGATTGTGCTGTGAAACATCACCATTCTTGGATAGACATAGAAGATAACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | GCAGACAGAGAACAGCACAGTCAGGCTTTGAGAATCAGAGACACACAGTATGACACTAAAGTACTGGGCTaGGTCAGACTCCTTCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: ADREQHSQALRIRDTQYDTKVLG*VRLLQV Trigger: AACTTGAAGGAGTCTGACCAAGCCCAGTACTTTAGT...GTCATACTGTGTGTCTCTGATTCTCAAAGCCTGACTGTGCTGTTCTCTGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000198703.2 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | ATATCAGAACCCAGAGAGTATCAGAGTCTGGCAGAAGTGGGGGTTATCTTCTATACTAAAGTACTGGGCTaGGTCAGACTCCTTCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: ISEPREYQSLAEVGVIFYTKVLG*VRLLQV Trigger: AACTTGAAGGAGTCTGACCAAGCCCAGTACTTTAGT...ATAGAAGATAACCCCCACTTCTGCCAGACTCTGATACTCTCTGGGTTCTGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGAAAGTGTTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCGTTGGGTTCCAGGAATaGACTGCCACAACTTCATGC | + |
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Preference number: 5 (lower is better) Translates to: FIESVNNSMSRQRTAQSGVGFQE*TATTSC Trigger: GCATGAAGTTGTGGCAGTCAATTCCTGGAACCCAAC...GCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAACACTTTCAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000198703.2 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | ATCTTCTATGTCTATCCAAGAATGGTGATGTTTCACAGCACAATCCTGCAGCCAACTAAAGTACTGGGCTaGGTCAGACTCCTTCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: IFYVYPRMVMFHSTILQPTKVLG*VRLLQV Trigger: AACTTGAAGGAGTCTGACCAAGCCCAGTACTTTAGT...TGGCTGCAGGATTGTGCTGTGAAACATCACCATTCTTGGATAGACATAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGAAAGTGTTAATAACTCCATGAGCAGACAGAGAACAGCACAGTCAGGCGATTCTTGGGTCACGTaGAGTTGGGTTCCAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: FIESVNNSMSRQRTAQSGDSWVT*SWVPGI Trigger: AATTCCTGGAACCCAACTCAACGTGACCCAAGAATC...GCCTGACTGTGCTGTTCTCTGTCTGCTCATGGAGTTATTAACACTTTCAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198703.2 |
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| CDS TCA 72 bp | GCATGCAGACAGCCTGATGAGAGCAGAAGCAGGACCTaGGCCATGGCTGGAGTCCCTCCAGGAAGCGAGATC | + |
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Preference number: 6 (lower is better) Translates to: ACRQPDESRSRT*AMAGVPPGSEI Trigger: GATCTCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGGTCCTGCTTCTGCTCTCATCAGGCTGTCTGCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000196195.2 ENSMUST00000199387.2 |
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| CDS CCA 72 bp | GACAGCCTGATGAGAGCAGAAGCAGGACCTGAGCCATaGCTGGAGTCCCTCCAGGAAGCGAGATCAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DSLMRAEAGPEP*LESLQEARSAK Trigger: CTTTGCTGATCTCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGGTCCTGCTTCTGCTCTCATCAGGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000196195.2 ENSMUST00000199387.2 |
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| CDS CCA 72 bp | ACCATGGCTCCCAGGTTCATCAGTGAAGGATTCCTCTaGTCGCTTGTGTGCTCCAGGCCAGCTGTGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: TMAPRFISEGFL*SLVCSRPAVVN Trigger: ATTCACCACAGCTGGCCTGGAGCACACAAGCGACCAGAGGAATCCTTCACTGATGAACCTGGGAGCCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS GCA 72 bp | AGGTTCATCAGTGAAGGATTCCTCTGGTCGCTTGTGTaGTCCAGGCCAGCTGTGGTGAATTCAGAGGTGACG | + |
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Preference number: 6 (lower is better) Translates to: RFISEGFLWSLV*SRPAVVNSEVT Trigger: CGTCACCTCTGAATTCACCACAGCTGGCCTGGAGCACACAAGCGACCAGAGGAATCCTTCACTGATGAACCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS TCA 72 bp | GAGTGCTTGGGTCACGTTGAGTTGGGTTCCAGGAATTaGCTGCCACAACTTCATGCCTTCTGTCGACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ECLGHVELGSRN*LPQLHAFCRLQ Trigger: CTGCAGTCGACAGAAGGCATGAAGTTGTGGCAGTCAATTCCTGGAACCCAACTCAACGTGACCCAAGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS TCA 72 bp | ACTGGGCTTGGTCAGACTCCTTCAAGTTCAGGATTCTaGGGACTCCAGATGTCTGACCCTGTGTCCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TGLGQTPSSSGF*GLQMSDPVSSS Trigger: TGAACTGGACACAGGGTCAGACATCTGGAGTCCTCAGAATCCTGAACTTGAAGGAGTCTGACCAAGCCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000198703.2 ENSMUST00000199387.2 |
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| CDS CCA 72 bp | TCACAGCACAATCCTGCAGCCATGAGCTCTGATTCTTaGGTCACGTTGAGTTGGGTTCCAGGAATTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: SQHNPAAMSSDS*VTLSWVPGIDC Trigger: GCAGTCAATTCCTGGAACCCAACTCAACGTGACCCAAGAATCAGAGCTCATGGCTGCAGGATTGTGCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198703.2 |
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| CDS GCA 72 bp | GCTTGGGTCACGTTGAGTTGGGTTCCAGGAATTGACTaGCACAACTTCATGCCTTCTGTCGACTGCAGATTA | + |
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Preference number: 6 (lower is better) Translates to: AWVTLSWVPGID*HNFMPSVDCRL Trigger: TAATCTGCAGTCGACAGAAGGCATGAAGTTGTGGCAGTCAATTCCTGGAACCCAACTCAACGTGACCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110978.7 ENSMUST00000199387.2 |
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| CDS CAA 72 bp | AATCCTGCAGCCATGAGCTCTGATTCTTGGGTCACGTaGAGTTGGGTTCCAGGAATTGACTGCCACAACTTC | + |
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Preference number: 6 (lower is better) Translates to: NPAAMSSDSWVT*SWVPGIDCHNF Trigger: GAAGTTGTGGCAGTCAATTCCTGGAACCCAACTCAACGTGACCCAAGAATCAGAGCTCATGGCTGCAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198703.2 |
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| CDS GCA 72 bp | TCTTGGGTCACGTTGAGTTGGGTTCCAGGAATTGACTaGCACAACTTCATGCCTTCTGTCGACTGCAGATTA | + |
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Preference number: 6 (lower is better) Translates to: SWVTLSWVPGID*HNFMPSVDCRL Trigger: TAATCTGCAGTCGACAGAAGGCATGAAGTTGTGGCAGTCAATTCCTGGAACCCAACTCAACGTGACCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198703.2 |
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| CDS CCA 72 bp | GTCGACTGCAGATTAACTCGACTAAAGTACTGGGCTTaGTCAGACTCCTTCAAGTTCAGGATTCTGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: VDCRLTRLKYWA*SDSFKFRILRT Trigger: AGTCCTCAGAATCCTGAACTTGAAGGAGTCTGACCAAGCCCAGTACTTTAGTCGAGTTAATCTGCAGTCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000198703.2 ENSMUST00000199387.2 |
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| CDS CAA 72 bp | TGTCGACTGCAGATTAACTCGACTAAAGTACTGGGCTaGGTCAGACTCCTTCAAGTTCAGGATTCTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: CRLQINSTKVLG*VRLLQVQDSED Trigger: GTCCTCAGAATCCTGAACTTGAAGGAGTCTGACCAAGCCCAGTACTTTAGTCGAGTTAATCTGCAGTCGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110978.7 ENSMUST00000198703.2 ENSMUST00000199387.2 |
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