Pregenerated sensors for PILRA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046245Ensembl transcript IDs: ENSMUST00000058897.11, ENSMUST00000110980.2, ENSMUST00000197586.2, ENSMUST00000199028.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGAGAGAGGGGAGATGCAGCAGAGAGGCAGCTCAGAGGAGTTCCTaGCGGCCCTCTTTGAGGAGTAGAGTATTCTGGTCCCCCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: KREGRCSREAAQRSS*RPSLRSRVFWSPCC Trigger: ACAGCAGGGGGACCAGAATACTCTACTCCTCAAAGAGGGCCGCCAGGAACTCCTCTGAGCTGCCTCTCTGCTGCATCTCCCCTCTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR GCA 90 bp | AGTTCCTGGCGGCCCTCTTTGAGGAGTAGAGTATTCTGGTCCCCCTaGTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGC | + |
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Preference number: 1 (lower is better) Translates to: SSWRPSLRSRVFWSP*CCLPAGRASHFFPS Trigger: GCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCCTCAAAGAGGGCCGCCAGGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR GCA 90 bp | ATGCCCCCGACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTaGTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTGGA | + |
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Preference number: 1 (lower is better) Translates to: MPPTQEAASFPPDDD*SSDLDLEQLMEDIG Trigger: TCCAATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTTGCTGCCTCCTGTGTCGGGGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CCA 90 bp | AGGAGGCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGACCTaGACTTGGAGCAACTCATGGAAGACATTGGAGAGCCAGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: RRQQVSLLTMIAPVT*TWSNSWKTLESQKR Trigger: TCTCTTCTGGCTCTCCAATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTTGCTGCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR TCA 90 bp | GGCAAACTGCCATCTCTGGAGAATATAGGAAATTGGGGACAGCAGTaGGACCCAGAGCTGGGAGAACCTCTAGAAGATCATGTTTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GKLPSLENIGNWGQQ*DPELGEPLEDHVWA Trigger: AGCCCAAACATGATCTTCTAGAGGTTCTCCCAGCTCTGGGTCTCACTGCTGTCCCCAATTTCCTATATTCTCCAGAGATGGCAGTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR GCA 90 bp | CAGCCTGGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTaGTTTGTGTGTGTGTGTGTGTGTGTGTCGCTATGGCAAACTGCC | + |
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Preference number: 1 (lower is better) Translates to: QPGLIKQVSGITPEL*FVCVCVCVSLWQTA Trigger: GGCAGTTTGCCATAGCGACACACACACACACACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCCAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CCA 90 bp | GGCTTGAGCTACTTCTGGGAACTGCATGGCCTTAGGCAAATGCCTTaGCCACCTGGTGTTTATTTTAGTTCCATGTCTCACACCATCTGT | + |
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Preference number: 1 (lower is better) Translates to: GLSYFWELHGLRQMP*PPGVYFSSMSHTIC Trigger: ACAGATGGTGTGAGACATGGAACTAAAATAAACACCAGGTGGCCAAGGCATTTGCCTAAGGCCATGCAGTTCCCAGAAGTAGCTCAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CCA 90 bp | ACTCCTGAGCTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTCGCTATaGCAAACTGCCATCTCTGGAGAATATAGGAAATTGGGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: TPELCFVCVCVCVSL*QTAISGEYRKLGTA Trigger: TGCTGTCCCCAATTTCCTATATTCTCCAGAGATGGCAGTTTGCCATAGCGACACACACACACACACACACACAAAGCACAGCTCAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR TCA 90 bp | AACTTGGAGTTTCTCAGTTTGTCTGTGGTCAGACCTTCTGATGAGTaGATTTCTGTGTCTGCCTGTGGGAAGCTGAGAGTCTTCCTACTA | + |
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Preference number: 1 (lower is better) Translates to: NLEFLSLSVVRPSDE*ISVSACGKLRVFLL Trigger: TAGTAGGAAGACTCTCAGCTTCCCACAGGCAGACACAGAAATTCACTCATCAGAAGGTCTGACCACAGACAAACTGAGAAACTCCAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCCATCTGTCTAGGCTTTaGGCTGATGTCCAGTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GVEYSGPPAVVCLQGEPLHLSRL*ADVQCH Trigger: ATGGCACTGGACATCAGCCCAAAGCCTAGACAGATG...GAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CAA 90 bp | GCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGACCTGGACTaGGAGCAACTCATGGAAGACATTGGAGAGCCAGAAGAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AASFPPDDDCSSDLD*EQLMEDIGEPEERG Trigger: CCCTCTCTCTTCTGGCTCTCCAATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR GCA 90 bp | GGAGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTACTCCTGAGCTGTaGTTTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GVEYSGPPAVVCLQGEPLITPEL*FVCVCV Trigger: CACACACACACACACAAAGCACAGCTCAGGAGTAAT...GAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTGTGTCTGCCTGTaGGAAGCTGAGAGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SRVFWSPCCCLPAGRASHFCVCL*EAESLP Trigger: AGGAAGACTCTCAGCTTCCCACAGGCAGACACAGAA...ATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCCTGGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGGCGAAATGGCTCAGTaGGTAAGAGCACCCGACTGC | + |
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Preference number: 2 (lower is better) Translates to: VQPGLIKQVSGITPELCFGEMAQ*VRAPDC Trigger: GCAGTCGGGTGCTCTTACCCACTGAGCCATTTCGCC...AAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCCAGGCTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR GCA 90 bp | TCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAAGCTACTTCTGGGAACTaGATGGCCTTAGGCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: SKCPTPSAQHGACPLGKEATSGN*MALGKC Trigger: GCATTTGCCTAAGGCCATGCAGTTCCCAGAAGTAGC...TTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTGATGGAGTAGGGCATTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTCGCCCAGCAACCACATGGTaGCTCAACAACCATCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLELLLSCALCVCVCVCRPATTW*LNNHPQ Trigger: TTGGGGATGGTTGTTGAGCCACCATGTGGTTGCTGG...GCGACACACACACACACACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCCTGGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGGCTTGAGCTACTTCTaGGAACTGCATGGCCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: VQPGLIKQVSGITPELCFGLSYF*ELHGLR Trigger: CCTAAGGCCATGCAGTTCCCAGAAGTAGCTCAAGCC...AAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCCAGGCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | TCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAAACTTGGAGCAACTCATaGAAGACATTGGAGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SKCPTPSAQHGACPLGKETWSNS*KTLESQ Trigger: CTGGCTCTCCAATGTCTTCCATGAGTTGCTCCAAGT...TTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTGATGGAGTAGGGCATTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTGGAGAATATAGGAAATTGGGGACAGCAGTGAGACCCAGAGCTGGGAGAATCCCCAACAAGATCTaGCTCCCTCTTCTAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: ISGEYRKLGTAVRPRAGRIPNKI*LPLLEC Trigger: ACACTCTAGAAGAGGGAGTCAGATCTTGTTGGGGAT...TCTCCCAGCTCTGGGTCTCACTGCTGTCCCCAATTTCCTATATTCTCCAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR GCA 90 bp | AGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTAGGATCTCTTCCTTaGCTTGGGCTGCTAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: SRVFWSPCCCLPAGRASHLGSLP*LGLLEK Trigger: TTTTTCTAGCAGCCCAAGGCAAGGAAGAGATCCTAA...ATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTCGCAGTCACAGATGTGGGTaGATGTCATGGAGTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLELLLSCALCVCVCVCRSHRCG*MSWSQS Trigger: AGACTGACTCCATGACATGCACCCACATCTGTGACT...GCGACACACACACACACACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR TCA 90 bp | CCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTAGACCTTCTGATGAGTaGATTTCTGTGTCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PDDDCSSDLDLEQLMEDIRPSDE*ISVSAC Trigger: ACAGGCAGACACAGAAATTCACTCATCAGAAGGTCT...AATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR TCA 90 bp | AATTTATTGACCACCCATGCTGAATACATAGCTGACCCAAGGCTAGAATCCAAGGGGGTCCTTAGAGGGTaGGAAGTCAAGGGTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: NLLTTHAEYIADPRLESKGVLRG*EVKGLI Trigger: GATGAGACCCTTGACTTCTCACCCTCTAAGGACCCC...CTTGGATTCTAGCCTTGGGTCAGCTATGTATTCAGCATGGGTGGTCAATAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR TCA 90 bp | GGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGACCCGACTGCTCTTCTaGAGGTCCAGAGTTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: GLIKQVSGITPELCFVCVTRLLF*RSRVQI Trigger: GATTTGAACTCTGGACCTTCAGAAGAGCAGTCGGGT...CACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | AATTTATTGACCACCCATGCTGAATACATAGCTGACCCAAGGCTAGAATCCAAGCCAGTGACCTGGACTTaGAGCAACTCATGGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: NLLTTHAEYIADPRLESKPVTWT*SNSWKT Trigger: TGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGG...CTTGGATTCTAGCCTTGGGTCAGCTATGTATTCAGCATGGGTGGTCAATAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTTTAGAAAAAGGAACTTaGAGTTTCTCAGTTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PDDDCSSDLDLEQLMEDILEKGT*SFSVCL Trigger: CAGACAAACTGAGAAACTCCAAGTTCCTTTTTCTAA...AATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR GCA 72 bp | AGCATGGGGCTTGTCCATTGGGAAAGGAAGGGCTTGTaGCCCACATGCCCCCGACACAGGAGGCAGCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: SMGLVHWERKGL*PTCPRHRRQQV Trigger: AACTTGCTGCCTCCTGTGTCGGGGGCATGTGGGGCACAAGCCCTTCCTTTCCCAATGGACAAGCCCCATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGGGGAGATGCAGCAGAGAGGCAGCTCAGAGGAGTTCCTGGCGGCCCTCAGATCATGTTTGGGCTaGAGCTACTTCTGGGAACTG | + |
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Preference number: 3 (lower is better) Translates to: ERGEMQQRGSSEEFLAALRSCLG*SYFWEL Trigger: CAGTTCCCAGAAGTAGCTCAAGCCCAAACATGATCT...GAGGGCCGCCAGGAACTCCTCTGAGCTGCCTCTCTGCTGCATCTCCCCTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CCA 72 bp | AGTTCCTGGCGGCCCTCTTTGAGGAGTAGAGTATTCTaGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSWRPSLRSRVF*SPCCCLPAGRA Trigger: GGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCCTCAAAGAGGGCCGCCAGGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGGGGAGATGCAGCAGAGAGGCAGCTCAGAGGAGTTCCTGGCGGCCCTCATTAGGATCTCTTCCTaGCCTTGGGCTGCTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: ERGEMQQRGSSEEFLAALIRISS*PWAARK Trigger: TTTTCTAGCAGCCCAAGGCAAGGAAGAGATCCTAAT...GAGGGCCGCCAGGAACTCCTCTGAGCTGCCTCTCTGCTGCATCTCCCCTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CAA 90 bp | TCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAACTGGTCCCCCTGCTGTaGTTTGCCTGCAGGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: SKCPTPSAQHGACPLGKELVPLL*FACRES Trigger: GCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAG...TTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTGATGGAGTAGGGCATTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR GCA 72 bp | CGGCCCTCTTTGAGGAGTAGAGTATTCTGGTCCCCCTaGTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTC | + |
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Preference number: 3 (lower is better) Translates to: RPSLRSRVFWSP*CCLPAGRASHF Trigger: GAAATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCCTCAAAGAGGGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR GCA 72 bp | ACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTaGTCCAGTGACCTGGACTTGGAGCAACTCATGGAA | + |
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Preference number: 3 (lower is better) Translates to: TQEAASFPPDDD*SSDLDLEQLME Trigger: TTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTTGCTGCCTCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CAA 90 bp | TCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAACTCCTGAGCTGTGCTTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SKCPTPSAQHGACPLGKELLSCA*CVCVCV Trigger: CACACACACACACACACACAAAGCACAGCTCAGGAG...TTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTGATGGAGTAGGGCATTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CAA 90 bp | AGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTCTAGAAGATCATGTTaGGGCTTGAGCTACTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SRVFWSPCCCLPAGRASHSRRSC*GLSYFW Trigger: CCAGAAGTAGCTCAAGCCCAAACATGATCTTCTAGA...ATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR TCA 72 bp | GAGCTGGGAGAACCTCTAGAAGATCATGTTTGGGCTTaGGCTACTTCTGGGAACTGCATGGCCTTAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: ELGEPLEDHVWA*ATSGNCMALGK Trigger: TTTGCCTAAGGCCATGCAGTTCCCAGAAGTAGCTCAAGCCCAAACATGATCTTCTAGAGGTTCTCCCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CCA 72 bp | ACCTCTAGAAGATCATGTTTGGGCTTGAGCTACTTCTaGGAACTGCATGGCCTTAGGCAAATGCCTTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: TSRRSCLGLSYF*ELHGLRQMPWP Trigger: TGGCCAAGGCATTTGCCTAAGGCCATGCAGTTCCCAGAAGTAGCTCAAGCCCAAACATGATCTTCTAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR TCA 72 bp | CCACATGGTGGCTCAACAACCATCCCCAACAAGATCTaGCTCCCTCTTCTAGAGTGTCTGAAGACAGCTATA | + |
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Preference number: 3 (lower is better) Translates to: PHGGSTTIPNKI*LPLLECLKTAI Trigger: TATAGCTGTCTTCAGACACTCTAGAAGAGGGAGTCAGATCTTGTTGGGGATGGTTGTTGAGCCACCATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR TCA 72 bp | GCCTGGGTTAATAAAGCAGGTCTCTGGAATTACTCCTaGGCTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AWVNKAGLWNYS*AVLCVCVCVCV Trigger: GACACACACACACACACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR TCA 72 bp | ATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTaGCCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: ISSRAADKCWGC*PALLFKSAVQP Trigger: AGGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CAA 90 bp | AGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATGTTAGAAAAAGGAACTaGGAGTTTCTCAGTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: SRVFWSPCCCLPAGRASHVRKRN*EFLSLS Trigger: AGACAAACTGAGAAACTCCAAGTTCCTTTTTCTAAC...ATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR TCA 72 bp | TCTAGGCTTTGGGCTGATGTCCAGTGCCATGGTACATaGGCAAGTACACTGTGTGCAGGTTATTATAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: SRLWADVQCHGT*ASTLCAGYYSH Trigger: GTGACTATAATAACCTGCACACAGTGTACTTGCTCATGTACCATGGCACTGGACATCAGCCCAAAGCCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR-3UTR CAA 90 bp | AATTTATTGACCACCCATGCTGAATACATAGCTGACCCAAGGCTAGAATCCAAGGGAGAATATAGGAAATaGGGGACAGCAGTGAGACCC | + |
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Preference number: 3 (lower is better) Translates to: NLLTTHAEYIADPRLESKGEYRK*GTAVRP Trigger: GGGTCTCACTGCTGTCCCCAATTTCCTATATTCTCC...CTTGGATTCTAGCCTTGGGTCAGCTATGTATTCAGCATGGGTGGTCAATAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CCA 72 bp | TTAGAAAAAGGAACTTGGAGTTTCTCAGTTTGTCTGTaGTCAGACCTTCTGATGAGTGAATTTCTGTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: LEKGTWSFSVCL*SDLLMSEFLCL Trigger: CAGACACAGAAATTCACTCATCAGAAGGTCTGACCACAGACAAACTGAGAAACTCCAAGTTCCTTTTTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| CDS-3UTR CCA 90 bp | GGAGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCTACACAGTCTCTTCCTaGGGGTTCCCATGGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GVEYSGPPAVVCLQGEPLYTVSS*GFPWTG Trigger: GCCTGTCCATGGGAACCCCCAGGAAGAGACTGTGTA...GAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| CDS-3UTR CCA 90 bp | CCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTTCCTGGGGGTTCCCATaGACAGGCAGGTTGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PDDDCSSDLDLEQLMEDISWGFP*TGRLGA Trigger: AGCGCCCAACCTGCCTGTCCATGGGAACCCCCAGGA...AATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CAA 72 bp | GTCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTaGTCCATTGGGAAAGGAAGGGCTTGTGCCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: VQMPYSISSAWG*SIGKGRACAPH Trigger: ATGTGGGGCACAAGCCCTTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTGATGGAGTAGGGCATTTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
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| 3UTR CAA 72 bp | TTGAGGAGTAGAGTATTCTGGTCCCCCTGCTGTTGTTaGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSRVFWSPCCC*PAGRASHFFPS Trigger: GCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCCTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTCGCGCAGGATCTGAGCCATaGCTGGAGTCCCTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLELLLSCALCVCVCVCRAGSEP*LESLQE Trigger: TTCCTGGAGGGACTCCAGCCATGGCTCAGATCCTGC...GCGACACACACACACACACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATCTCACTGGTTTCCAATaGCTCCCTGGCTGGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRVFWSPCCCLPAGRASHLTGFQ*LPGWDF Trigger: GAAATCCCAGCCAGGGAGCCATTGGAAACCAGTGAG...ATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | GTGCAGCCTGGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGATCTGAGCCATGGCTaGAGTCCCTCCAGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VQPGLIKQVSGITPELCFDLSHG*SPSRKR Trigger: TCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGATC...AAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCCAGGCTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR TCA 90 bp | GGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGAGCAGAAGCAGGATCTaGGCCATGGCTGGAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLIKQVSGITPELCFVCVSRSRI*AMAGVP Trigger: AGGGACTCCAGCCATGGCTCAGATCCTGCTTCTGCT...CACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR TCA 90 bp | TCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAATTGGGTCCCAGGAATTaGCTGCCAAAACTGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKCPTPSAQHGACPLGKELGPRN*LPKLYA Trigger: GGCATACAGTTTTGGCAGTCAATTCCTGGGACCCAA...TTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTGATGGAGTAGGGCATTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| 3UTR CAA 72 bp | AGACCCAGAGCTGGGAGAACCTCTAGAAGATCATGTTaGGGCTTGAGCTACTTCTGGGAACTGCATGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPRAGRTSRRSC*GLSYFWELHGL Trigger: AAGGCCATGCAGTTCCCAGAAGTAGCTCAAGCCCAAACATGATCTTCTAGAGGTTCTCCCAGCTCTGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| 3UTR CAA 72 bp | TTCCCTCCTGACGATGATTGCTCCAGTGACCTGGACTaGGAGCAACTCATGGAAGACATTGGAGAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPPDDDCSSDLD*EQLMEDIGEPE Trigger: TTCTGGCTCTCCAATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATGCCTTCTGTTGTTTaGAGAAAAACTCTGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVEYSGPPAVVCLQGEPLMPSVV*RKTLPK Trigger: CTTTGGCAGAGTTTTTCTGCAAACAACAGAAGGCAT...GAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTCGCCCAAAGTACCGGGTCTaGTCAGACTCCTTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLELLLSCALCVCVCVCRPKYRV*SDSFKF Trigger: GAACTTGAAGGAGTCTGACCAGACCCGGTACTTTGG...GCGACACACACACACACACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGTATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATGGCTTGAGAGGGAGATaGAAGCATACACGATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVFWSPCCCLPAGRASHGLRGR*KHTRCY Trigger: ATAACATCGTGTATGCTTCCATCTCCCTCTCAAGCC...ATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAATACTCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | CCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTTTGGTCACATTGAGTTaGGTCCCAGGAATTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PDDDCSSDLDLEQLMEDILVTLS*VPGIDC Trigger: GCAGTCAATTCCTGGGACCCAACTCAATGTGACCAA...AATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGGAGAATATAGGAAATTGGGGACAGCAGTGAGACCCAGAGCTGGGAGACAATGGCTCCCTGGCTaGGATTTCAGCTTTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISGEYRKLGTAVRPRAGRQWLPG*DFSFSL Trigger: AAGACTAAAGCTGAAATCCCAGCCAGGGAGCCATTG...TCTCCCAGCTCTGGGTCTCACTGCTGTCCCCAATTTCCTATATTCTCCAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | AATTTATTGACCACCCATGCTGAATACATAGCTGACCCAAGGCTAGAATCCAAGTGCAGCAGTGGTGCTTaGAAGTGTAGTGGGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLLTTHAEYIADPRLESKCSSGA*KCSGGA Trigger: TGCACCCCCACTACACTTCCAAGCACCACTGCTGCA...CTTGGATTCTAGCCTTGGGTCAGCTATGTATTCAGCATGGGTGGTCAATAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR GCA 90 bp | TTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTTAATAAAGCATCTGAATTTCCAGCATaGAGACAGGCTGATGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTCSVVQVSCAAWVNKASEFPA*RQADES Trigger: GCTCTCATCAGCCTGTCTGCATGCTGGAAATTCAGA...TGCTTTATTAACCCAGGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | CCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTCCTTGGGGTTTTCTTTaGGATCCATACATTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDDDCSSDLDLEQLMEDIPWGFL*DPYIVL Trigger: AAGGACAATGTATGGATCCCAAAGAAAACCCCAAGG...AATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR GCA 90 bp | GGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGTTTGCAGAAAAACTCTaGCAAAGTACCGGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLIKQVSGITPELCFVCVFAEKL*QSTGSG Trigger: ACCAGACCCGGTACTTTGGCAGAGTTTTTCTGCAAA...CACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | CCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTATACATTGTCCTTCATaGCCAACACTCTCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDDDCSSDLDLEQLMEDIIHCPS*PTLSCF Trigger: GAAACATGAGAGTGTTGGCCATGAAGGACAATGTAT...AATGTCTTCCATGAGTTGCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | GAGAACAAGACTTCAGCCACCAACTTATCTGAGGAGAAAGAAATTAAAATTGTGTCGATGGAGCCACCCTaGACTCCAGAGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ENKTSATNLSEEKEIKIVSMEPP*TPEQLS Trigger: TGAAAGCTGCTCTGGAGTCCAGGGTGGCTCCATCGA...CACAATTTTAATTTCTTTCTCCTCAGATAAGTTGGTGGCTGAAGTCTTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | TGTGTCTGCCTGTGGGAAGCTGAGAGTCTTCCTACTAGAAACAAAGGTGACTCTCGATGTTATTATCCTTaGGGTTTTCTTTGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCLWEAESLPTRNKGDSRCYYP*GFLWDP Trigger: TGGATCCCAAAGAAAACCCCAAGGATAATAACATCG...AGAGTCACCTTTGTTTCTAGTAGGAAGACTCTCAGCTTCCCACAGGCAGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTTAGAAAAAGGAACTTGGAGTTTCTCAGTTTGTCTGTGGTCAGACCTTTCTCATGTTTCTCACTaGTTTCCAATGGCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKLEKGTWSFSVCLWSDLSHVSH*FPMAPW Trigger: CCAGGGAGCCATTGGAAACCAGTGAGAAACATGAGA...AAGGTCTGACCACAGACAAACTGAGAAACTCCAAGTTCCTTTTTCTAACTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR TCA 90 bp | AATTTATTGACCACCCATGCTGAATACATAGCTGACCCAAGGCTAGAATCCAAGTCTGTTGGATCTTTCTaGATTTCCAGCATGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NLLTTHAEYIADPRLESKSVGSF*ISSMQT Trigger: TGTCTGCATGCTGGAAATTCAGAAAGATCCAACAGA...CTTGGATTCTAGCCTTGGGTCAGCTATGTATTCAGCATGGGTGGTCAATAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTTAGAAAAAGGAACTTGGAGTTTCTCAGTTTGTCTGTGGTCAGACCTTACTGCCAAAACTGTATaGCTTCTGTTGTTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKLEKGTWSFSVCLWSDLTAKTV*LLLFAE Trigger: TTCTGCAAACAACAGAAGGCATACAGTTTTGGCAGT...AAGGTCTGACCACAGACAAACTGAGAAACTCCAAGTTCCTTTTTCTAACTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS CCA 90 bp | TGGAGTACACAGTCTCTTCCTGGGGGTTCCCATGGACAGGCAGGTTaGGCGCTGTTCCTGGTGAGGTCGGGCTTGAGAGGGAGATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WSTQSLPGGSHGQAG*ALFLVRSGLRGRWK Trigger: CTTCCATCTCCCTCTCAAGCCCGACCTCACCAGGAACAGCGCCCAACCTGCCTGTCCATGGGAACCCCCAGGAAGAGACTGTGTACTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGGGGAGATGCAGCAGAGAGGCAGCTCAGAGGAGTTCCTGGCGGCCCTCCAACCCAACTGTGGTTaGCAGATCCAGGCCACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERGEMQQRGSSEEFLAALQPNCG*QIQATN Trigger: ATTGGTGGCCTGGATCTGCAAACCACAGTTGGGTTG...GAGGGCCGCCAGGAACTCCTCTGAGCTGCCTCTCTGCTGCATCTCCCCTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS CCA 90 bp | TTGGCCTTTACGATGGAGTACACAGTCTCTTCCTGGGGGTTCCCATaGACAGGCAGGTTGGGCGCTGTTCCTGGTGAGGTCGGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAFTMEYTVSSWGFP*TGRLGAVPGEVGLE Trigger: CTCAAGCCCGACCTCACCAGGAACAGCGCCCAACCTGCCTGTCCATGGGAACCCCCAGGAAGAGACTGTGTACTCCATCGTAAAGGCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS TCA 90 bp | GAATTTCCAGCATGCAGACAGGCTGATGAGAGCAGAAGCAGGATCTaGGCCATGGCTGGAGTCCCTCCAGGAAGCGAGATCAGCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EFPACRQADESRSRI*AMAGVPPGSEISKA Trigger: GGCTTTGCTGATCTCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGATCCTGCTTCTGCTCTCATCAGCCTGTCTGCATGCTGGAAATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS TCA 90 bp | GATCTTTCAGCATGCAGACAGGCTGATGAGAGCAGAAGCAGGATCTaGGCCATGGCTGGAGTCCCTCCAGGAAGCGAGATCAGCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLSACRQADESRSRI*AMAGVPPGSEISKA Trigger: GGCTTTGCTGATCTCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGATCCTGCTTCTGCTCTCATCAGCCTGTCTGCATGCTGAAAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197586.2 |
||
| CDS TCA 90 bp | TGGTCAGACTCCTTCAAGTTCAGGATTCTGAGGACTCCAGATGTCTaGCCCTGTGTCCAGTTCAGGATGAGCCGGCCCTTGAAGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WSDSFKFRILRTPDV*PCVQFRMSRPLKCS Trigger: TGAGCACTTCAAGGGCCGGCTCATCCTGAACTGGACACAGGGTCAGACATCTGGAGTCCTCAGAATCCTGAACTTGAAGGAGTCTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS GCA 90 bp | CACTATCAATCCCAAAACCCCAACCAGGAACACAGCAGCAGCCGTTaGCAACCCAACTGTGGTTTGCAGATCCAGGCCACCAATGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HYQSQNPNQEHSSSR*QPNCGLQIQATNVS Trigger: GCTAACATTGGTGGCCTGGATCTGCAAACCACAGTTGGGTTGGCAACGGCTGCTGCTGTGTTCCTGGTTGGGGTTTTGGGATTGATAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGGGGGTGCAGGTGGCATaGGTCACATTGAGTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLIKQVSGITPELCFVCVGVQVA*VTLSWV Trigger: GACCCAACTCAATGTGACCAATGCCACCTGCACCCC...CACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS GCA 90 bp | TCCAATGGCTCCCTGGCTGGGATTTCAGCTTTAGTCTTCTGGCCTTaGCTTCTTCTCTTCCACCAGAGGAACACTATCAATCCCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: SNGSLAGISALVFWP*LLLFHQRNTINPKT Trigger: GGTTTTGGGATTGATAGTGTTCCTCTGGTGGAAGAGAAGAAGGCAAGGCCAGAAGACTAAAGCTGAAATCCCAGCCAGGGAGCCATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS CCA 90 bp | CTTGGAAGTGTAGTGGGGGTGCAGGTGGCATTGGTCACATTGAGTTaGGTCCCAGGAATTGACTGCCAAAACTGTATGCCTTCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGSVVGVQVALVTLS*VPGIDCQNCMPSVV Trigger: AACAACAGAAGGCATACAGTTTTGGCAGTCAATTCCTGGGACCCAACTCAATGTGACCAATGCCACCTGCACCCCCACTACACTTCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS CCA 90 bp | TTGTCCTTCATGGCCAACACTCTCATGTTTCTCACTGGTTTCCAATaGCTCCCTGGCTGGGATTTCAGCTTTAGTCTTCTGGCCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSFMANTLMFLTGFQ*LPGWDFSFSLLALP Trigger: AGGCAAGGCCAGAAGACTAAAGCTGAAATCCCAGCCAGGGAGCCATTGGAAACCAGTGAGAAACATGAGAGTGTTGGCCATGAAGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGGGGTGTGTGCAGAAGTaGCAGCAGTGGTGCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLIKQVSGITPELCFVCVGCVQK*QQWCLE Trigger: TTCCAAGCACCACTGCTGCAACTTCTGCACACACCC...CACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS GCA 90 bp | GTGCAGGTGGCATTGGTCACATTGAGTTGGGTCCCAGGAATTGACTaGCAAAACTGTATGCCTTCTGTTGTTTGCAGAAAAACTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VQVALVTLSWVPGID*QNCMPSVVCRKTLP Trigger: TGGCAGAGTTTTTCTGCAAACAACAGAAGGCATACAGTTTTGGCAGTCAATTCCTGGGACCCAACTCAATGTGACCAATGCCACCTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS CCA 90 bp | TCGGGCTTGAGAGGGAGATGGAAGCATACACGATGTTATTATCCTTaGGGTTTTCTTTGGGATCCATACATTGTCCTTCATGGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SGLRGRWKHTRCYYP*GFLWDPYIVLHGQH Trigger: GTGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAAGGATAATAACATCGTGTATGCTTCCATCTCCCTCTCAAGCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTGCCTGTGGGAAGCTGAGAGTCTTCCTACTAGAAACAAAGGTGACTCTATCCTTGGGGTTTTCTTaGGGATCCATACATTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSACGKLRVFLLETKVTLSLGFS*GSIHCP Trigger: AGGACAATGTATGGATCCCAAAGAAAACCCCAAGGA...TAGAGTCACCTTTGTTTCTAGTAGGAAGACTCTCAGCTTCCCACAGGCAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CAA 90 bp | GGGTTAATAAAGCAGGTCTCTGGAATTACTCCTGAGCTGTGCTTTGTGTGTGTGTTCTGTTATGTCATTTaGGGTGTGTGCAGAAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLIKQVSGITPELCFVCVFCYVI*GVCRSC Trigger: GCAACTTCTGCACACACCCAAAATGACATAACAGAA...CACACACACAAAGCACAGCTCAGGAGTAATTCCAGAGACCTGCTTTATTAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS CCA 90 bp | GGGAGATGGAAGCATACACGATGTTATTATCCTTGGGGTTTTCTTTaGGATCCATACATTGTCCTTCATGGCCAACACTCTCATGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRWKHTRCYYPWGFL*DPYIVLHGQHSHVS Trigger: AGAAACATGAGAGTGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAAGGATAATAACATCGTGTATGCTTCCATCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS-3UTR CAA 90 bp | AATTTATTGACCACCCATGCTGAATACATAGCTGACCCAAGGCTAGAATCCAAGACGATGTTATTATCCTaGGGGTTTTCTTTGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: NLLTTHAEYIADPRLESKTMLLS*GFSLGS Trigger: GGATCCCAAAGAAAACCCCAAGGATAATAACATCGT...CTTGGATTCTAGCCTTGGGTCAGCTATGTATTCAGCATGGGTGGTCAATAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CAA 90 bp | GAGAACAAGACTTCAGCCACCAACTTATCTGAGGAGAAAGAAATTAAAATTGTGTTTGGGATCCATACATaGTCCTTCATGGCCAACACT | + |
|
Preference number: 5 (lower is better) Translates to: ENKTSATNLSEEKEIKIVFGIHT*SFMANT Trigger: AGTGTTGGCCATGAAGGACAATGTATGGATCCCAAA...CACAATTTTAATTTCTTTCTCCTCAGATAAGTTGGTGGCTGAAGTCTTGTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CAA 90 bp | GAGAACAAGACTTCAGCCACCAACTTATCTGAGGAGAAAGAAATTAAAATTGTGACTGTATGCCTTCTGTaGTTTGCAGAAAAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ENKTSATNLSEEKEIKIVTVCLL*FAEKLC Trigger: GCAGAGTTTTTCTGCAAACAACAGAAGGCATACAGT...CACAATTTTAATTTCTTTCTCCTCAGATAAGTTGGTGGCTGAAGTCTTGTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTTAGAAAAAGGAACTTGGAGTTTCTCAGTTTGTCTGTGGTCAGACCTTCCAATGTTAGCACTCTaGACTTCTGTTATGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RKLEKGTWSFSVCLWSDLPMLAL*TSVMSF Trigger: AAATGACATAACAGAAGTCAAGAGTGCTAACATTGG...AAGGTCTGACCACAGACAAACTGAGAAACTCCAAGTTCCTTTTTCTAACTTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058897.11 |
||
| CDS CCA 72 bp | CAGTCTCTTCCTGGGGGTTCCCATGGACAGGCAGGTTaGGCGCTGTTCCTGGTGAGGTCGGGCTTGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSLPGGSHGQAG*ALFLVRSGLRG Trigger: CCCTCTCAAGCCCGACCTCACCAGGAACAGCGCCCAACCTGCCTGTCCATGGGAACCCCCAGGAAGAGACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
||
| CDS CAA 90 bp | ATGGAGTACACAGTCTCTTCCTGGGGGTTCCCATGGACAGGCAGGTaGGGCGCTGTTCCTGGTGAGGTCGGGCTTGAGAGGGAGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: MEYTVSSWGFPWTGR*GAVPGEVGLEREME Trigger: TTCCATCTCCCTCTCAAGCCCGACCTCACCAGGAACAGCGCCCAACCTGCCTGTCCATGGGAACCCCCAGGAAGAGACTGTGTACTCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS TCA 72 bp | GCATGCAGACAGGCTGATGAGAGCAGAAGCAGGATCTaGGCCATGGCTGGAGTCCCTCCAGGAAGCGAGATC | + |
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Preference number: 6 (lower is better) Translates to: ACRQADESRSRI*AMAGVPPGSEI Trigger: GATCTCGCTTCCTGGAGGGACTCCAGCCATGGCTCAGATCCTGCTTCTGCTCTCATCAGCCTGTCTGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058897.11 ENSMUST00000197586.2 ENSMUST00000199028.2 |
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| CDS CAA 72 bp | ATCCCAAAACCCCAACCAGGAACACAGCAGCAGCCGTaGCCAACCCAACTGTGGTTTGCAGATCCAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: IPKPQPGTQQQP*PTQLWFADPGH Trigger: GTGGCCTGGATCTGCAAACCACAGTTGGGTTGGCAACGGCTGCTGCTGTGTTCCTGGTTGGGGTTTTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | GTGGTGCTTGGAAGTGTAGTGGGGGTGCAGGTGGCATaGGTCACATTGAGTTGGGTCCCAGGAATTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: VVLGSVVGVQVA*VTLSWVPGIDC Trigger: GCAGTCAATTCCTGGGACCCAACTCAATGTGACCAATGCCACCTGCACCCCCACTACACTTCCAAGCACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS TCA 72 bp | TCCTTCAAGTTCAGGATTCTGAGGACTCCAGATGTCTaGCCCTGTGTCCAGTTCAGGATGAGCCGGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFKFRILRTPDV*PCVQFRMSRPL Trigger: CAAGGGCCGGCTCATCCTGAACTGGACACAGGGTCAGACATCTGGAGTCCTCAGAATCCTGAACTTGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CCA 72 bp | ATTTTGGGTGTGTGCAGAAGTTGCAGCAGTGGTGCTTaGAAGTGTAGTGGGGGTGCAGGTGGCATTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: ILGVCRSCSSGA*KCSGGAGGIGH Trigger: GTGACCAATGCCACCTGCACCCCCACTACACTTCCAAGCACCACTGCTGCAACTTCTGCACACACCCAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | GAACACAGCAGCAGCCGTTGCCAACCCAACTGTGGTTaGCAGATCCAGGCCACCAATGTTAGCACTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: EHSSSRCQPNCG*QIQATNVSTLD Trigger: GTCAAGAGTGCTAACATTGGTGGCCTGGATCTGCAAACCACAGTTGGGTTGGCAACGGCTGCTGCTGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS TCA 72 bp | ACCGGGTCTGGTCAGACTCCTTCAAGTTCAGGATTCTaGGGACTCCAGATGTCTGACCCTGTGTCCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TGSGQTPSSSGF*GLQMSDPVSSS Trigger: TGAACTGGACACAGGGTCAGACATCTGGAGTCCTCAGAATCCTGAACTTGAAGGAGTCTGACCAGACCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CCA 72 bp | GTAGTGGGGGTGCAGGTGGCATTGGTCACATTGAGTTaGGTCCCAGGAATTGACTGCCAAAACTGTATGCCT | + |
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Preference number: 6 (lower is better) Translates to: VVGVQVALVTLS*VPGIDCQNCMP Trigger: AGGCATACAGTTTTGGCAGTCAATTCCTGGGACCCAACTCAATGTGACCAATGCCACCTGCACCCCCACTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | GGAAGTGTAGTGGGGGTGCAGGTGGCATTGGTCACATaGAGTTGGGTCCCAGGAATTGACTGCCAAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: GSVVGVQVALVT*SWVPGIDCQNC Trigger: ACAGTTTTGGCAGTCAATTCCTGGGACCCAACTCAATGTGACCAATGCCACCTGCACCCCCACTACACTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 90 bp | GTGGTGCTTGGAAGTGTAGTGGGGGTGCAGGTGGCATTGGTCACATaGAGTTGGGTCCCAGGAATTGACTGCCAAAACTGTATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VVLGSVVGVQVALVT*SWVPGIDCQNCMPS Trigger: AGAAGGCATACAGTTTTGGCAGTCAATTCCTGGGACCCAACTCAATGTGACCAATGCCACCTGCACCCCCACTACACTTCCAAGCACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 90 bp | CCCAACCAGGAACACAGCAGCAGCCGTTGCCAACCCAACTGTGGTTaGCAGATCCAGGCCACCAATGTTAGCACTCTTGACTTCTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: PNQEHSSSRCQPNCG*QIQATNVSTLDFCY Trigger: ATAACAGAAGTCAAGAGTGCTAACATTGGTGGCCTGGATCTGCAAACCACAGTTGGGTTGGCAACGGCTGCTGCTGTGTTCCTGGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CCA 72 bp | ATGGAAATCCTTCCATCTCCAGGCTATGCTCATCTGTaGATCCTTGGCCAACTTCCAGGGGAAGTAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: MEILPSPGYAHL*ILGQLPGEVEG Trigger: TCCTTCTACTTCCCCTGGAAGTTGGCCAAGGATCCACAGATGAGCATAGCCTGGAGATGGAAGGATTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 ENSMUST00000197586.2 |
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| CDS CCA 72 bp | CTCATGTTTCTCACTGGTTTCCAATGGCTCCCTGGCTaGGATTTCAGCTTTAGTCTTCTGGCCTTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LMFLTGFQWLPG*DFSFSLLALPS Trigger: AGAAGGCAAGGCCAGAAGACTAAAGCTGAAATCCCAGCCAGGGAGCCATTGGAAACCAGTGAGAAACATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 90 bp | AACCCAACTGTGGTTTGCAGATCCAGGCCACCAATGTTAGCACTCTaGACTTCTGTTATGTCATTTTGGGTGTGTGCAGAAGTTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NPTVVCRSRPPMLAL*TSVMSFWVCAEVAA Trigger: TGCTGCAACTTCTGCACACACCCAAAATGACATAACAGAAGTCAAGAGTGCTAACATTGGTGGCCTGGATCTGCAAACCACAGTTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 90 bp | GTCGGGCTTGAGAGGGAGATGGAAGCATACACGATGTTATTATCCTaGGGGTTTTCTTTGGGATCCATACATTGTCCTTCATGGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: VGLEREMEAYTMLLS*GFSLGSIHCPSWPT Trigger: TGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAAGGATAATAACATCGTGTATGCTTCCATCTCCCTCTCAAGCCCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CCA 72 bp | GTTGTTTGCAGAAAAACTCTGCCAAAGTACCGGGTCTaGTCAGACTCCTTCAAGTTCAGGATTCTGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: VVCRKTLPKYRV*SDSFKFRILRT Trigger: AGTCCTCAGAATCCTGAACTTGAAGGAGTCTGACCAGACCCGGTACTTTGGCAGAGTTTTTCTGCAAACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS GCA 72 bp | AGCACTCTTGACTTCTGTTATGTCATTTTGGGTGTGTaGAGAAGTTGCAGCAGTGGTGCTTGGAAGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: STLDFCYVILGV*RSCSSGAWKCS Trigger: ACTACACTTCCAAGCACCACTGCTGCAACTTCTGCACACACCCAAAATGACATAACAGAAGTCAAGAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CCA 72 bp | CCAATGTTAGCACTCTTGACTTCTGTTATGTCATTTTaGGTGTGTGCAGAAGTTGCAGCAGTGGTGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PMLALLTSVMSF*VCAEVAAVVLG Trigger: TCCAAGCACCACTGCTGCAACTTCTGCACACACCCAAAATGACATAACAGAAGTCAAGAGTGCTAACATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | TCCCAGGAATTGACTGCCAAAACTGTATGCCTTCTGTaGTTTGCAGAAAAACTCTGCCAAAGTACCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SQELTAKTVCLL*FAEKLCQSTGS Trigger: AGACCCGGTACTTTGGCAGAGTTTTTCTGCAAACAACAGAAGGCATACAGTTTTGGCAGTCAATTCCTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | ACCAATGTTAGCACTCTTGACTTCTGTTATGTCATTTaGGGTGTGTGCAGAAGTTGCAGCAGTGGTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: TNVSTLDFCYVI*GVCRSCSSGAW Trigger: CCAAGCACCACTGCTGCAACTTCTGCACACACCCAAAATGACATAACAGAAGTCAAGAGTGCTAACATTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | GTGGTTTGCAGATCCAGGCCACCAATGTTAGCACTCTaGACTTCTGTTATGTCATTTTGGGTGTGTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VVCRSRPPMLAL*TSVMSFWVCAE Trigger: TTCTGCACACACCCAAAATGACATAACAGAAGTCAAGAGTGCTAACATTGGTGGCCTGGATCTGCAAACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS GCA 72 bp | GCATTGGTCACATTGAGTTGGGTCCCAGGAATTGACTaGCAAAACTGTATGCCTTCTGTTGTTTGCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: ALVTLSWVPGID*QNCMPSVVCRK Trigger: TTTTCTGCAAACAACAGAAGGCATACAGTTTTGGCAGTCAATTCCTGGGACCCAACTCAATGTGACCAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 90 bp | AGGGAGATGGAAGCATACACGATGTTATTATCCTTGGGGTTTTCTTaGGGATCCATACATTGTCCTTCATGGCCAACACTCTCATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: REMEAYTMLLSLGFS*GSIHCPSWPTLSCF Trigger: GAAACATGAGAGTGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAAGGATAATAACATCGTGTATGCTTCCATCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CCA 72 bp | TTGGGGTTTTCTTTGGGATCCATACATTGTCCTTCATaGCCAACACTCTCATGTTTCTCACTGGTTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: LGFSLGSIHCPS*PTLSCFSLVSN Trigger: ATTGGAAACCAGTGAGAAACATGAGAGTGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | GAAGCATACACGATGTTATTATCCTTGGGGTTTTCTTaGGGATCCATACATTGTCCTTCATGGCCAACACTC | + |
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Preference number: 6 (lower is better) Translates to: EAYTMLLSLGFS*GSIHCPSWPTL Trigger: GAGTGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAAGGATAATAACATCGTGTATGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CCA 72 bp | AAGCATACACGATGTTATTATCCTTGGGGTTTTCTTTaGGATCCATACATTGTCCTTCATGGCCAACACTCT | + |
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Preference number: 6 (lower is better) Translates to: KHTRCYYPWGFL*DPYIVLHGQHS Trigger: AGAGTGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAAGGATAATAACATCGTGTATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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| CDS CAA 72 bp | GTTATTATCCTTGGGGTTTTCTTTGGGATCCATACATaGTCCTTCATGGCCAACACTCTCATGTTTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: VIILGVFFGIHT*SFMANTLMFLT Trigger: AGTGAGAAACATGAGAGTGTTGGCCATGAAGGACAATGTATGGATCCCAAAGAAAACCCCAAGGATAATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058897.11 ENSMUST00000110980.2 |
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