RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIKFYVE (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025949

Ensembl transcript IDs: ENSMUST00000081154.14, ENSMUST00000097707.5, ENSMUST00000185263.7, ENSMUST00000190058.7

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGAGGACAGGAACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTaGGCATCTGTCTGTATGGAGCCACTGACCGCACACTGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: REDRNSAGRFPLGLR*ASVCMEPLTAHCRG
Trigger: CCCTCTGCAGTGTGCGGTCAGTGGCTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTTCCTGTCCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 90 bp GCCAGCTACTGCTTCACTGTCTACAGCAAACCTGCCACACTGTGCTaGCTCGGGTGCAGACTGCCCTCTGTAGCATCGTCCATCCAGCCC +
Preference number: 1 (lower is better)
Translates to: ASYCFTVYSKPATLC*LGCRLPSVASSIQP
Trigger: GGGCTGGATGGACGATGCTACAGAGGGCAGTCTGCACCCGAGTCAGCACAGTGTGGCAGGTTTGCTGTAGACAGTGAAGCAGTAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 90 bp ACGTTCAGGCTGATAGAAGCGGCTGAGTCACTGTCCACTGTGGACTaGAAACTGCTGACTGAGGTGCGCTTGCTAGGACTGGCAGAATTA +
Preference number: 1 (lower is better)
Translates to: TFRLIEAAESLSTVD*KLLTEVRLLGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACCTCAGTCAGCAGTTTCCAGTCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGCCTGAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 90 bp TGTCTAGTTCACCCTTCTCTAGCACAGTCCTTGATTCCAACAAAGTaGTATCCTCAGAAGACAGGGCCTCACGAGGGCACTCAGGATCCT +
Preference number: 1 (lower is better)
Translates to: CLVHPSLAQSLIPTK*YPQKTGPHEGTQDP
Trigger: AGGATCCTGAGTGCCCTCGTGAGGCCCTGTCTTCTGAGGATAGCACTTTGTTGGAATCAAGGACTGTGCTAGAGAAGGGTGAACTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 90 bp AGAAACCAAATACTCTTTCTGGTCAGCAGGGTGAGGGGGCACATGTaGGTACTTGGAGGGCTTCTTGATATGGAAGTTCACGTTGTCCAG +
Preference number: 1 (lower is better)
Translates to: RNQILFLVSRVRGHM*VLGGLLDMEVHVVQ
Trigger: CTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACCCTGCTGACCAGAAAGAGTATTTGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp ATATCCATGTCATCATCCTGGTGCTTGACATCAGGTCGGACTGTCTaGACAACCTGGCAGACTAGTGACACAATGATGTCCCTCCAAGAC +
Preference number: 1 (lower is better)
Translates to: ISMSSSWCLTSGRTV*TTWQTSDTMMSLQD
Trigger: GTCTTGGAGGGACATCATTGTGTCACTAGTCTGCCAGGTTGTTCAGACAGTCCGACCTGATGTCAAGCACCAGGATGATGACATGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 90 bp CCCTCTTCACCTCGTCCCTCCGTCAGAAGATGGAATGAAGGGCTTTaGATTAATGTTGGAGGCATAGCGAACTCATCCATGAGAAAAGAG +
Preference number: 1 (lower is better)
Translates to: PSSPRPSVRRWNEGL*INVGGIANSSMRKE
Trigger: CTCTTTTCTCATGGATGAGTTCGCTATGCCTCCAACATTAATGCAAAGCCCTTCATTCCATCTTCTGACGGAGGGACGAGGTGAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp CATCAGGTCGGACTGTCTGAACAACCTGGCAGACTAGTGACACAATaGTGTCCCTCCAAGACGATGACAATGACTCGTTTTGAAGCAACT +
Preference number: 1 (lower is better)
Translates to: HQVGLSEQPGRLVTQ*CPSKTMTMTRFEAT
Trigger: AGTTGCTTCAAAACGAGTCATTGTCATCGTCTTGGAGGGACATCATTGTGTCACTAGTCTGCCAGGTTGTTCAGACAGTCCGACCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp AGCTTTCATCTGGCTTTTGGGATCCTGTTGCTCATCCGTTTGCTGTaGAGTCTCTGGCTGTTCATTTCCTACGGCATCCTGTTGATCCAT +
Preference number: 1 (lower is better)
Translates to: SFHLAFGILLLIRLL*SLWLFISYGILLIH
Trigger: ATGGATCAACAGGATGCCGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCCCAAAAGCCAGATGAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 90 bp GGATGGCTCGGAGTGTCCTTCCACAGAGTTCACAGAGTCACTGTCTaGAGAAGGTGTCTCAGAAAATTCTGTACTCTGAAGTGGTCTATA +
Preference number: 1 (lower is better)
Translates to: GWLGVSFHRVHRVTV*RRCLRKFCTLKWSI
Trigger: TATAGACCACTTCAGAGTACAGAATTTTCTGAGACACCTTCTCCAGACAGTGACTCTGTGAACTCTGTGGAAGGACACTCCGAGCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 90 bp CCAATGCAAAAAGAGCACAGGGAATACCTGCTGGGCAAGTGGGGGTaGTATAATCTTGATGCTTCAAAGAGGCAACAGCTTGTGGAATAC +
Preference number: 1 (lower is better)
Translates to: PMQKEHREYLLGKWG*YNLDASKRQQLVEY
Trigger: GTATTCCACAAGCTGTTGCCTCTTTGAAGCATCAAGATTATACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCTCTTTTTGCATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp ATCACAGCTGGACTCTTCAGTGTTCGGTCCATCTTTCCAAGGCACTaGAGAGGCCAAGGCCTAACATCAAGCATACATAAGCCTTGTTTA +
Preference number: 1 (lower is better)
Translates to: ITAGLFSVRSIFPRH*RGQGLTSSIHKPCL
Trigger: TAAACAAGGCTTATGTATGCTTGATGTTAGGCCTTGGCCTCTTCAGTGCCTTGGAAAGATGGACCGAACACTGAAGAGTCCAGCTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 90 bp ATGCTGGCTGATCTGTTTCGAGCAGGAGACTTCCCAGCATCCTCTTaGACAGATACGAGTCTTGTTGAAAGAGCACTATTTGAGGAATCC +
Preference number: 1 (lower is better)
Translates to: MLADLFRAGDFPASS*TDTSLVERALFEES
Trigger: GGATTCCTCAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAAGTCTCCTGCTCGAAACAGATCAGCCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp ATATCTGCATATAAAATTTGTGGCAAGTGCCCAAGTGGGGTTTGGTaGGCAGCTGGTCCATGGACACCACTAAATCACCTTGGGTCATTC +
Preference number: 1 (lower is better)
Translates to: ISAYKICGKCPSGVW*AAGPWTPLNHLGSF
Trigger: GAATGACCCAAGGTGATTTAGTGGTGTCCATGGACCAGCTGCTCACCAAACCCCACTTGGGCACTTGCCACAAATTTTATATGCAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp GTTTGCTGTGAAGTCTCTGGCTGTTCATTTCCTACGGCATCCTGTTaGTCCATATGGAGAGGCAACAATGACTCTGGTACCAATGCAAAA +
Preference number: 1 (lower is better)
Translates to: VCCEVSGCSFPTASC*SIWRGNNDSGTNAK
Trigger: TTTTGCATTGGTACCAGAGTCATTGTTGCCTCTCCATATGGATCAACAGGATGCCGTAGGAAATGAACAGCCAGAGACTTCACAGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 90 bp CTGATCATGATGACTAACACAATCCAACCAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGCTTGTGCCCTTGTAGCGATGTGTCC +
Preference number: 1 (lower is better)
Translates to: LIMMTNTIQPTSINH*LSNCYSLCPCSDVS
Trigger: GGACACATCGCTACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGTTGGATTGTGTTAGTCATCATGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 90 bp TGTAAAGGGTCTCTAAAAGCTTTCATCTGGCTTTTGGGATCCTGTTaGTCATCCGTTTGCTGTGAAGTCTCTGGCTGTTCATTTCCTACG +
Preference number: 1 (lower is better)
Translates to: CKGSLKAFIWLLGSC*SSVCCEVSGCSFPT
Trigger: CGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCCCAAAAGCCAGATGAAAGCTTTTAGAGACCCTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 90 bp TCAAGCTTTGCCAGGCTAAATCATCCTCTAAGAATATGTTACGACTaGCTTTTCTACTCCCAACTGGTGTCCGAGGTTCGCTTGGATCAA +
Preference number: 1 (lower is better)
Translates to: SSFARLNHPLRICYD*LFYSQLVSEVRLDQ
Trigger: TTGATCCAAGCGAACCTCGGACACCAGTTGGGAGTAGAAAAGCCAGTCGTAACATATTCTTAGAGGATGATTTAGCCTGGCAAAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 90 bp GATGTGTTCTCAACCAGTAACGGTGATCTTGAAATTCCATCCCACTaGTGTGATGGCAGATTTTCTTCCACAGATCCTTTAACTGAGCAC +
Preference number: 1 (lower is better)
Translates to: DVFSTSNGDLEIPSH*CDGRFSSTDPLTEH
Trigger: GTGCTCAGTTAAAGGATCTGTGGAAGAAAATCTGCCATCACACCAGTGGGATGGAATTTCAAGATCACCGTTACTGGTTGAGAACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 90 bp TGGGGTTTGGTGAGCAGCTGGTCCATGGACACCACTAAATCACCTTaGGTCATTCGACTGATTCTTTCTAAAACTTGTGACTTTACATTA +
Preference number: 1 (lower is better)
Translates to: WGLVSSWSMDTTKSP*VIRLILSKTCDFTL
Trigger: TAATGTAAAGTCACAAGTTTTAGAAAGAATCAGTCGAATGACCCAAGGTGATTTAGTGGTGTCCATGGACCAGCTGCTCACCAAACCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 90 bp CGATTAAATAAGGACTCTTTGATGAAGGCATCACTTATTGAGAGCTaGTGTCCTCCAGTGTCAGAAACCAAATACTCTTTCTGGTCAGCA +
Preference number: 1 (lower is better)
Translates to: RLNKDSLMKASLIES*CPPVSETKYSFWSA
Trigger: TGCTGACCAGAAAGAGTATTTGGTTTCTGACACTGGAGGACAGCAGCTCTCAATAAGTGATGCCTTCATCAAAGAGTCCTTATTTAATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp TTTACATTAATGACCAGAGTAATGCCATGTTCCAGTAACATGTCCTaGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAATGTGGGT +
Preference number: 1 (lower is better)
Translates to: FTLMTRVMPCSSNMS*AIRDTVFSTRTNVG
Trigger: ACCCACATTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCTCAGGACATGTTACTGGAACATGGCATTACTCTGGTCATTAATGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 90 bp AAATATCCTTGTTACAGAAAAGGCAAGAGAAACACTCGCATATTATaGGGTGAAAGCATCTGCTCACAGTTCAGGATTTCTGGTCATGTT +
Preference number: 1 (lower is better)
Translates to: KYPCYRKGKRNTRIL*GESICSQFRISGHV
Trigger: AACATGACCAGAAATCCTGAACTGTGAGCAGATGCTTTCACCCCATAATATGCGAGTGTTTCTCTTGCCTTTTCTGTAACAAGGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 90 bp TGTCCTGAGCAATCCGAGACACTGTTTTCTCAACAAGAACCAATGTaGGTCGAACATCAACTATTCGTTGAACATAATTCTTCAAGAATT +
Preference number: 1 (lower is better)
Translates to: CPEQSETLFSQQEPM*VEHQLFVEHNSSRI
Trigger: AATTCTTGAAGAATTATGTTCAACGAATAGTTGATGTTCGACCCACATTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCTCAGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 90 bp TCCTGCTTATTTTGCTTGCCCAAAATGAGAGGTAAATCTAGACTATaGACACATATGCAGATTAAGTGCTGTTTGGCACATTACTCAAAT +
Preference number: 1 (lower is better)
Translates to: SCLFCLPKMRGKSRL*THMQIKCCLAHYSN
Trigger: ATTTGAGTAATGTGCCAAACAGCACTTAATCTGCATATGTGTTCATAGTCTAGATTTACCTCTCATTTTGGGCAAGCAAAATAAGCAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 90 bp TCAGTGACTACAGTTTCATTTCCTGCTTATTTTGCTTGCCCAAAATaGGAGGTAAATCTAGACTATGAACACATATGCAGATTAAGTGCT +
Preference number: 1 (lower is better)
Translates to: SVTTVSFPAYFACPK*EVNLDYEHICRLSA
Trigger: AGCACTTAATCTGCATATGTGTTCATAGTCTAGATTTACCTCTCATTTTGGGCAAGCAAAATAAGCAGGAAATGAAACTGTAGTCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 90 bp CAGCAACACGTAGGCATAATTTTCTCATGTTACTATCAGCTACTTTaGAATTCATATTTTGAGCATGAGATTTCTTTCGTATTCACAGCT +
Preference number: 1 (lower is better)
Translates to: QQHVGIIFSCYYQLL*NSYFEHEISFVFTA
Trigger: AGCTGTGAATACGAAAGAAATCTCATGCTCAAAATATGAATTCCAAAGTAGCTGATAGTAACATGAGAAAATTATGCCTACGTGTTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGGGGAGGAGTCTAGCCTaGAAGTCAGAAGCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEGRSLA*KSEAWD
Trigger: GTCCCAAGCTTCTGACTTTCAGGCTAGACTCCTCCC...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 90 bp GGCACATGTGGGTACTTGGAGGGCTTCTTGATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGGCTGATAGAAGCGGCTGAGTCACTG +
Preference number: 2 (lower is better)
Translates to: GTCGYLEGFLIWKFT*SSSTFRLIEAAESL
Trigger: CAGTGACTCAGCCGCTTCTATCAGCCTGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp GGATCCTGTTGCTCATCCGTTTGCTGTGAAGTCTCTGGCTGTTCATTTCCTACGCCAAGTGGGGTTTGGTaGGCAGCTGGTCCATGGACA +
Preference number: 2 (lower is better)
Translates to: GSCCSSVCCEVSGCSFPTPSGVW*AAGPWT
Trigger: TGTCCATGGACCAGCTGCTCACCAAACCCCACTTGG...CGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR GCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGTGGGGTGAAAGCATCTaGTCACAGTTCAGGATTTCT +
Preference number: 2 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEWGESI*SQFRIS
Trigger: AGAAATCCTGAACTGTGAGCAGATGCTTTCACCCCA...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp GGATCCTGTTGCTCATCCGTTTGCTGTGAAGTCTCTGGCTGTTCATTTCCTACGCTGGAAACTGCTGACTaGGGTGCGCTTGCTAGGACT +
Preference number: 2 (lower is better)
Translates to: GSCCSSVCCEVSGCSFPTLETAD*GALART
Trigger: AGTCCTAGCAAGCGCACCTCAGTCAGCAGTTTCCAG...CGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAGGCAGATCACCTCCTTaGCACTTCTACAGAAGCCCA +
Preference number: 2 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSGRSPP*HFYRSP
Trigger: TGGGCTTCTGTAGAAGTGCCAAGGAGGTGATCTGCC...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CCA 90 bp AGACTGCTGCTCTCCTTGGCCCCCTTCTCCTCGCTCTGCAACCGAAGCTCTCAAAGGAAAATGGCCTCATaGCCAAAATTACAGTGTTTC +
Preference number: 2 (lower is better)
Translates to: RLLLSLAPFSSLCNRSSQRKMAS*PKLQCF
Trigger: GAAACACTGTAATTTTGGCCATGAGGCCATTTTCCT...TTGAGAGCTTCGGTTGCAGAGCGAGGAGAAGGGGGCCAAGGAGAGCAGCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000185263.7
3UTR-3UTR TCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGTCTGGTCAACAGAGTTaGGTTCAACTTTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: LRESGPRGLETTTMSTTKSGQQS*VQLSLT
Trigger: AGTGAGAGAAAGTTGAACTCAACTCTGTTGACCAGA...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp ACCAGTAAATCTGCTCTGGAAAATAATCTCGAGTTGAGCATCTCATCCCCTTTTGAAGGGAGCTGCCACTaGCCTGCTCCTGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: TSKSALENNLELSISSPFEGSCH*PAPERL
Trigger: GAGCCTCTCAGGAGCAGGTCAGTGGCAGCTCCCTTC...AAAAGGGGATGAGATGCTCAACTCGAGATTATTTTCCAGAGCAGATTTACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTCCTGCCACACTGTGCTaGCTCGGGTGCAGACTGCCC +
Preference number: 2 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSPATLC*LGCRLP
Trigger: GGGCAGTCTGCACCCGAGTCAGCACAGTGTGGCAGG...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp TTATTGAGAGCTGCTGTCCTCCAGTGTCAGAAACCAAATACTCTTTCTGGTCAGGCTGATAGAAGCGGCTaGGTCACTGTCCACTGTGGA +
Preference number: 2 (lower is better)
Translates to: LLRAAVLQCQKPNTLSGQADRSG*VTVHCG
Trigger: TCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGC...CTGACCAGAAAGAGTATTTGGTTTCTGACACTGGAGGACAGCAGCTCTCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 90 bp CCAGTGTCATCCTGTAAAGGGTCTCTAAAAGCTTTCATCTGGCTTTaGGGATCCTGTTGCTCATCCGTTTGCTGTGAAGTCTCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PVSSCKGSLKAFIWL*GSCCSSVCCEVSGC
Trigger: ACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCCCAAAAGCCAGATGAAAGCTTTTAGAGACCCTTTACAGGATGACACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp TTCCAGGTTGTTATGATGCCAGCCCAAAGGGGTAAAAGGCAGCTCTTTGGATTTGAAGGCATCACTTATTaGGAGCTGCTGTCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: FQVVMMPAQRGKRQLFGFEGITY*ELLSSS
Trigger: ACTGGAGGACAGCAGCTCTCAATAAGTGATGCCTTC...AAATCCAAAGAGCTGCCTTTTACCCCTTTGGGCTGGCATCATAACAACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CCA 90 bp TTATTGAGAGCTGCTGTCCTCCAGTGTCAGAAACCAAATACTCTTTCTGGTCAGCTGTCCACTGTGGACTaGAAACTGCTGACTGAGGTG +
Preference number: 2 (lower is better)
Translates to: LLRAAVLQCQKPNTLSGQLSTVD*KLLTEV
Trigger: CACCTCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...CTGACCAGAAAGAGTATTTGGTTTCTGACACTGGAGGACAGCAGCTCTCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 90 bp GAGCAGGAGACTTCCCAGCATCCTCTTGAACAGATACGAGTCTTGTaGAAAGAGCACTATTTGAGGAATCCGGATGAATCAAGCTTTGCC +
Preference number: 2 (lower is better)
Translates to: EQETSQHPLEQIRVL*KEHYLRNPDESSFA
Trigger: GGCAAAGCTTGATTCATCCGGATTCCTCAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAAGTCTCCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTCACTCAGGGCTTCAGTaGCTACAGTTTCATTTCCTG +
Preference number: 2 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELHSGLQ*LQFHFL
Trigger: CAGGAAATGAAACTGTAGTCACTGAAGCCCTGAGTG...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR GCA 90 bp CCCTCCGTCAGAAGATGGAATGAAGGGCTTTGCATTAATGTTGGAGGCATAGCGTGTCCAGAAGAATTTTaGGTTCATCCTCAGTCGTCT +
Preference number: 2 (lower is better)
Translates to: PSVRRWNEGLCINVGGIACPEEF*VHPQSS
Trigger: AGACGACTGAGGATGAACGCAAAATTCTTCTGGACA...CGCTATGCCTCCAACATTAATGCAAAGCCCTTCATTCCATCTTCTGACGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 90 bp GCCTTTAATCCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTaGAAGCCAGTCTGGTCAACAGAGTTGAGTTCAACTTTCTCTCAC +
Preference number: 2 (lower is better)
Translates to: AFNPSTHRGRCFSVS*KPVWSTELSSTFSH
Trigger: GTGAGAGAAAGTTGAACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGGATTAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 90 bp AAGAGCACAGGGAATACCTGCTGGGCAAGTGGGGGTGGTATAATCTaGATGCTTCAAAGAGGCAACAGCTTGTGGAATACTTTTATTGTC +
Preference number: 2 (lower is better)
Translates to: KSTGNTCWASGGGII*MLQRGNSLWNTFIV
Trigger: GACAATAAAAGTATTCCACAAGCTGTTGCCTCTTTGAAGCATCAAGATTATACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAATTGCACAGAAGGTTTaGATACTGCGTAAGTCACTT +
Preference number: 2 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSIAQKV*ILRKSL
Trigger: AAGTGACTTACGCAGTATTCAAACCTTCTGTGCAAT...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp GGATCCTGTTGCTCATCCGTTTGCTGTGAAGTCTCTGGCTGTTCATTTCCTACGCTTGGGTCATTCGACTaGTTCTTTCTAAAACTTGTG +
Preference number: 2 (lower is better)
Translates to: GSCCSSVCCEVSGCSFPTLGSFD*FFLKLV
Trigger: CACAAGTTTTAGAAAGAATCAGTCGAATGACCCAAG...CGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR GCA 90 bp TTCCAGGTTGTTATGATGCCAGCCCAAAGGGGTAAAAGGCAGCTCTTTGGATTTTCACTTATTGAGAGCTaGTGTCCTCCAGTGTCAGAA +
Preference number: 2 (lower is better)
Translates to: FQVVMMPAQRGKRQLFGFSLIES*CPPVSE
Trigger: TTCTGACACTGGAGGACAGCAGCTCTCAATAAGTGA...AAATCCAAAGAGCTGCCTTTTACCCCTTTGGGCTGGCATCATAACAACCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CCA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTAACACTCGCATATTATaGGGTGAAAGCATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSNTRIL*GESICS
Trigger: TGAGCAGATGCTTTCACCCCATAATATGCGAGTGTT...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 90 bp TTCGAGCAGGAGACTTCCCAGCATCCTCTTGAACAGATACGAGTCTaGTTGAAAGAGCACTATTTGAGGAATCCGGATGAATCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: FEQETSQHPLEQIRV*LKEHYLRNPDESSF
Trigger: AAAGCTTGATTCATCCGGATTCCTCAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAAGTCTCCTGCTCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCAAGCACTGGTCAGTGTaGTGGAAACTTAAAATGAGA +
Preference number: 2 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSKHWSV*WKLKMR
Trigger: TCTCATTTTAAGTTTCCATCACACTGACCAGTGCTT...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAAAATATGCACTGGACTaGAACCAAAGAGAAAAACAG +
Preference number: 2 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSKYALD*NQREKQ
Trigger: CTGTTTTTCTCTTTGGTTTCAGTCCAGTGCATATTT...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp CAAAAAGAGCACAGGGAATACCTGCTGGGCAAGTGGGGGTGGTATAATCTTGATTTGATATGGACAAACTaGCGGATATCCATGTCATCA +
Preference number: 2 (lower is better)
Translates to: QKEHREYLLGKWGWYNLDLIWTN*RISMSS
Trigger: TGATGACATGGATATCCGTCAGTTTGTCCATATCAA...ATCAAGATTATACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCTCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp CAAAAAGAGCACAGGGAATACCTGCTGGGCAAGTGGGGGTGGTATAATCTTGATAAGAATTCCCTTTCCTaGAGCACAATAGGATCAATG +
Preference number: 2 (lower is better)
Translates to: QKEHREYLLGKWGWYNLDKNSLS*STIGSM
Trigger: CATTGATCCTATTGTGCTTCAGGAAAGGGAATTCTT...ATCAAGATTATACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCTCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTTTGTTACTAGGTAACTaGGAGGAGTCTAGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELLLLGN*EESSLK
Trigger: TTTCAGGCTAGACTCCTCCCAGTTACCTAGTAACAA...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CCA 90 bp CGATCCAGTGACAGATTAGTAATGCTGGCTGATCTGTTTCGAGCAGGAGACTTCAGAATATGTTACGACTaGCTTTTCTACTCCCAACTG +
Preference number: 2 (lower is better)
Translates to: RSSDRLVMLADLFRAGDFRICYD*LFYSQL
Trigger: CAGTTGGGAGTAGAAAAGCCAGTCGTAACATATTCT...GAAGTCTCCTGCTCGAAACAGATCAGCCAGCATTACTAATCTGTCACTGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 90 bp CAGCATCCTCTTGAACAGATACGAGTCTTGTTGAAAGAGCACTATTaGAGGAATCCGGATGAATCAAGCTTTGCCAGGCTAAATCATCCT +
Preference number: 2 (lower is better)
Translates to: QHPLEQIRVLLKEHY*RNPDESSFARLNHP
Trigger: AGGATGATTTAGCCTGGCAAAGCTTGATTCATCCGGATTCCTCAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTCAAGAGGATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 90 bp ATCATGATGACTAACACAATCCAACCAACGTCCATCAACCATTGCTaGTCCAATTGCTATAGCTTGTGCCCTTGTAGCGATGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: IMMTNTIQPTSINHC*SNCYSLCPCSDVSI
Trigger: AATGGACACATCGCTACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGTTGGATTGTGTTAGTCATCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp TCCCTACAATGCAGTTGGGATGTGTTCTCAACCAGTAACGGTGATCTTGAAATTGACAGATGTCTCATATaGAGGAACCATAGGAGAACC +
Preference number: 2 (lower is better)
Translates to: SLQCSWDVFSTSNGDLEIDRCLI*RNHRRT
Trigger: GGTTCTCCTATGGTTCCTTCATATGAGACATCTGTC...AATTTCAAGATCACCGTTACTGGTTGAGAACACATCCCAACTGCATTGTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp TTCTTGGTACAAACAAAGCCATTGACAACCACAGAGTCAAATTTCTTTCCACCTTCCATCCCACTGGTGTaGTGGCAGATTTTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: FLVQTKPLTTTESNFFPPSIPLV*WQIFFH
Trigger: GTGGAAGAAAATCTGCCATCACACCAGTGGGATGGA...AGGTGGAAAGAAATTTGACTCTGTGGTTGTCAATGGCTTTGTTTGTACCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp CTGTTTAAATGTCAAGGCATAAGTCTTTCGTTGATCTTCAGAGGAGGTGACTTCGACAATGACTCGTTTTaGAGCAACTGCTGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LFKCQGISLSLIFRGGDFDNDSF*SNCWSR
Trigger: CCTACTCCAGCAGTTGCTTCAAAACGAGTCATTGTC...GAAGTCACCTCCTCTGAAGATCAACGAAAGACTTATGCCTTGACATTTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CCA 90 bp TTCTTGGTACAAACAAAGCCATTGACAACCACAGAGTCAAATTTCTTTCCACCTGTCTTTAAACCAGGATaGCTCGGAGTGTCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: FLVQTKPLTTTESNFFPPVFKPG*LGVSFH
Trigger: GTGGAAGGACACTCCGAGCCATCCTGGTTTAAAGAC...AGGTGGAAAGAAATTTGACTCTGTGGTTGTCAATGGCTTTGTTTGTACCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR GCA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTTACAGTTTCATTTCCTaGTTATTTTGCTTGCCCAAA +
Preference number: 2 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSYSFIS*LFCLPK
Trigger: TTTGGGCAAGCAAAATAAGCAGGAAATGAAACTGTA...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 90 bp GGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTaGAGTTCAACTTTCTCTCACTTTGTTAATTTCCTCAAAGAGATC +
Preference number: 2 (lower is better)
Translates to: GRCFSVSLKPVWSTE*SSTFSHFVNFLKEI
Trigger: GATCTCTTTGAGGAAATTAACAAAGTGAGAGAAAGTTGAACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR TCA 90 bp CAGGAATTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACAAGTTCCAGGTTGTTATaGTGCCAGCCCAAAGGGGTA +
Preference number: 2 (lower is better)
Translates to: QEFIFLCAMFLVQTKPLTSSRLL*CQPKGV
Trigger: TACCCCTTTGGGCTGGCATCATAACAACCTGGAACT...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAATTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR GCA 90 bp CTGTTTAAATGTCAAGGCATAAGTCTTTCGTTGATCTTCAGAGGAGGTGACTTCTTGATTCCAACAAAGTaGTATCCTCAGAAGACAGGG +
Preference number: 2 (lower is better)
Translates to: LFKCQGISLSLIFRGGDFLIPTK*YPQKTG
Trigger: CCCTGTCTTCTGAGGATAGCACTTTGTTGGAATCAA...GAAGTCACCTCCTCTGAAGATCAACGAAAGACTTATGCCTTGACATTTAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR TCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAATCGCATATTATGGGGTaGAAGCATCTGCTCACAGTT +
Preference number: 2 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKSHIMG*KHLLTV
Trigger: AACTGTGAGCAGATGCTTTCACCCCATAATATGCGA...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CCA 90 bp ACCAGTAAATCTGCTCTGGAAAATAATCTCGAGTTGAGCATCTCATCCCCTTTTACCACTAAATCACCTTaGGTCATTCGACTGATTCTT +
Preference number: 2 (lower is better)
Translates to: TSKSALENNLELSISSPFTTKSP*VIRLIL
Trigger: AAGAATCAGTCGAATGACCCAAGGTGATTTAGTGGT...AAAAGGGGATGAGATGCTCAACTCGAGATTATTTTCCAGAGCAGATTTACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR GCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCCAAACCAAGAAGGTCTaGAAGTGCCTTCTCATGGAA +
Preference number: 2 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLQTKKV*KCLLME
Trigger: TTCCATGAGAAGGCACTTGCAGACCTTCTTGGTTTG...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR GCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAAACTCATAGGGGAAGGTaGTTTTCTGTGAGTTTGAAG +
Preference number: 2 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKTHRGR*FSVSLK
Trigger: CTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGT...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 90 bp GAATTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATaGACAACCACAGAGTCAAATTTCTTTCCACCTGGGATCTTCTTG +
Preference number: 2 (lower is better)
Translates to: EFIFLCAMFLVQTKP*TTTESNFFPPGIFL
Trigger: CAAGAAGATCCCAGGTGGAAAGAAATTTGACTCTGTGGTTGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR GCA 90 bp CAGGAATTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACACATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 2 (lower is better)
Translates to: QEFIFLCAMFLVQTKPLTHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAATTCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR GCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTATTTCCTGCTTATTTTaGTTGCCCAAAATGAGAGGT +
Preference number: 2 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSISCLF*LPKMRG
Trigger: ACCTCTCATTTTGGGCAAGCAAAATAAGCAGGAAAT...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAAACATCATAGAGTTTaGGTTTCTTCTTCAGATCCA +
Preference number: 2 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYKHHRV*VSSSDP
Trigger: TGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
3UTR-3UTR CCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAAAAACATCATAGAGTTTaGGTTTCTTCTTCAGATCCA +
Preference number: 2 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKKHHRV*VSSSDP
Trigger: TGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 72 bp GGAGAGAGCCCGCTTCCAGCCAGAGTTCCTGTGCTCTaGGCAGGCGGATGCGGGAGGACAGGAACTCTGCCG +
Preference number: 3 (lower is better)
Translates to: GESPLPARVPVL*AGGCGRTGTLP
Trigger: CGGCAGAGTTCCTGTCCTCCCGCATCCGCCTGCCCAGAGCACAGGAACTCTGGCTGGAAGCGGGCTCTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp TCGGCCTCAGGTGGGCATCTGTCTGTATGGAGCCACTaGCCGCACACTGCAGAGGGTGGACAAGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: SASGGHLSVWSH*PHTAEGGQGAA
Trigger: GGCTGCCCCTTGTCCACCCTCTGCAGTGTGCGGTCAGTGGCTCCATACAGACAGATGCCCACCTGAGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR GCA 72 bp TGGGCATCTGTCTGTATGGAGCCACTGACCGCACACTaGAGAGGGTGGACAAGGGGCAGCCCCCAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: WASVCMEPLTAH*RGWTRGSPQSR
Trigger: CCTGGACTGGGGGCTGCCCCTTGTCCACCCTCTGCAGTGTGCGGTCAGTGGCTCCATACAGACAGATGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR GCA 72 bp CTTCCAGCCAGAGTTCCTGTGCTCTGGGCAGGCGGATaGGGGAGGACAGGAACTCTGCCGGACGCTTTCCAC +
Preference number: 3 (lower is better)
Translates to: LPARVPVLWAGG*GRTGTLPDAFH
Trigger: GTGGAAAGCGTCCGGCAGAGTTCCTGTCCTCCCGCATCCGCCTGCCCAGAGCACAGGAACTCTGGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 72 bp AGGAACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTaGGCATCTGTCTGTATGGAGCCACTGACCGCACAC +
Preference number: 3 (lower is better)
Translates to: RNSAGRFPLGLR*ASVCMEPLTAH
Trigger: GTGTGCGGTCAGTGGCTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp TGCTTCACTGTCTACAGCAAACCTGCCACACTGTGCTaGCTCGGGTGCAGACTGCCCTCTGTAGCATCGTCC +
Preference number: 3 (lower is better)
Translates to: CFTVYSKPATLC*LGCRLPSVASS
Trigger: GGACGATGCTACAGAGGGCAGTCTGCACCCGAGTCAGCACAGTGTGGCAGGTTTGCTGTAGACAGTGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR GCA 72 bp AATAGCCAGCTACTGCTTCACTGTCTACAGCAAACCTaGCACACTGTGCTGACTCGGGTGCAGACTGCCCTC +
Preference number: 3 (lower is better)
Translates to: NSQLLLHCLQQT*HTVLTRVQTAL
Trigger: GAGGGCAGTCTGCACCCGAGTCAGCACAGTGTGGCAGGTTTGCTGTAGACAGTGAAGCAGTAGCTGGCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 72 bp CTGATAGAAGCGGCTGAGTCACTGTCCACTGTGGACTaGAAACTGCTGACTGAGGTGCGCTTGCTAGGACTG +
Preference number: 3 (lower is better)
Translates to: LIEAAESLSTVD*KLLTEVRLLGL
Trigger: CAGTCCTAGCAAGCGCACCTCAGTCAGCAGTTTCCAGTCCACAGTGGACAGTGACTCAGCCGCTTCTATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 72 bp GGGGGCACATGTGGGTACTTGGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGCTCCACGTTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GGTCGYLEGFLI*KFTLSSSTFRL
Trigger: CAGCCTGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp GGTGAGGGGGCACATGTGGGTACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGTCCAGCTCCACGTTCA +
Preference number: 3 (lower is better)
Translates to: GEGAHVGTWRAS*YGSSRCPAPRS
Trigger: TGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 72 bp CCCTCACAGCTTTGCCCTCATGAATCTAAGGGAAAGTaGGCCTCGTGGCCTAGAGACCACAACCATGAGTAC +
Preference number: 3 (lower is better)
Translates to: PSQLCPHESKGK*ASWPRDHNHEY
Trigger: GTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAGATTCATGAGGGCAAAGCTGTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGCCAGGAGTCACACATTaGTACCACGCAAAACAGTTC +
Preference number: 3 (lower is better)
Translates to: LRESGPRGLETTTMSTTKPGVTH*YHAKQF
Trigger: GAACTGTTTTGCGTGGTACAAATGTGTGACTCCTGG...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CAA 90 bp GGATCCTGTTGCTCATCCGTTTGCTGTGAAGTCTCTGGCTGTTCATTTCCTACGGGCACATGTGGGTACTaGGAGGGCTTCTTGATATGG +
Preference number: 3 (lower is better)
Translates to: GSCCSSVCCEVSGCSFPTGTCGY*EGFLIW
Trigger: CCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC...CGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp CTGGCTTTTGGGATCCTGTTGCTCATCCGTTTGCTGTaGAGTCTCTGGCTGTTCATTTCCTACGGCATCCTG +
Preference number: 3 (lower is better)
Translates to: LAFGILLLIRLL*SLWLFISYGIL
Trigger: CAGGATGCCGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCCCAAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 72 bp ATACTCTTTCTGGTCAGCAGGGTGAGGGGGCACATGTaGGTACTTGGAGGGCTTCTTGATATGGAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: ILFLVSRVRGHM*VLGGLLDMEVH
Trigger: GTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACCCTGCTGACCAGAAAGAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 72 bp GAGGCTCCCTCTTCACCTCGTCCCTCCGTCAGAAGATaGAATGAAGGGCTTTGCATTAATGTTGGAGGCATA +
Preference number: 3 (lower is better)
Translates to: EAPSSPRPSVRR*NEGLCINVGGI
Trigger: TATGCCTCCAACATTAATGCAAAGCCCTTCATTCCATCTTCTGACGGAGGGACGAGGTGAAGAGGGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGCACAACCAGATTATTTaGTACAGAAAAGGGATTCAC +
Preference number: 3 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEHNQII*YRKGIH
Trigger: GTGAATCCCTTTTCTGTACAAAATAATCTGGTTGTG...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp TCATCATCCTGGTGCTTGACATCAGGTCGGACTGTCTaGACAACCTGGCAGACTAGTGACACAATGATGTCC +
Preference number: 3 (lower is better)
Translates to: SSSWCLTSGRTV*TTWQTSDTMMS
Trigger: GGACATCATTGTGTCACTAGTCTGCCAGGTTGTTCAGACAGTCCGACCTGATGTCAAGCACCAGGATGATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp CAAACTGACGGATATCCATGTCATCATCCTGGTGCTTaGCATCAGGTCGGACTGTCTGAACAACCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: QTDGYPCHHPGA*HQVGLSEQPGR
Trigger: TCTGCCAGGTTGTTCAGACAGTCCGACCTGATGTCAAGCACCAGGATGATGACATGGATATCCGTCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 72 bp CCTCGTCCCTCCGTCAGAAGATGGAATGAAGGGCTTTaGATTAATGTTGGAGGCATAGCGAACTCATCCATG +
Preference number: 3 (lower is better)
Translates to: PRPSVRRWNEGL*INVGGIANSSM
Trigger: CATGGATGAGTTCGCTATGCCTCCAACATTAATGCAAAGCCCTTCATTCCATCTTCTGACGGAGGGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp GGACTCTTCAGTGTTCGGTCCATCTTTCCAAGGCACTaGAGAGGCCAAGGCCTAACATCAAGCATACATAAG +
Preference number: 3 (lower is better)
Translates to: GLFSVRSIFPRH*RGQGLTSSIHK
Trigger: CTTATGTATGCTTGATGTTAGGCCTTGGCCTCTTCAGTGCCTTGGAAAGATGGACCGAACACTGAAGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp GAAGTCTCTGGCTGTTCATTTCCTACGGCATCCTGTTaGTCCATATGGAGAGGCAACAATGACTCTGGTACC +
Preference number: 3 (lower is better)
Translates to: EVSGCSFPTASC*SIWRGNNDSGT
Trigger: GGTACCAGAGTCATTGTTGCCTCTCCATATGGATCAACAGGATGCCGTAGGAAATGAACAGCCAGAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 72 bp CAAGAAGCCATCCACCACACAGTCACCTCAAGCCAATaGTCAAGAGTGACCCCATACATACATAGAGGTCAA +
Preference number: 3 (lower is better)
Translates to: QEAIHHTVTSSQ*SRVTPYIHRGQ
Trigger: TTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGACTGTGTGGTGGATGGCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 72 bp GCCAGGCTAAATCATCCTCTAAGAATATGTTACGACTaGCTTTTCTACTCCCAACTGGTGTCCGAGGTTCGC +
Preference number: 3 (lower is better)
Translates to: ARLNHPLRICYD*LFYSQLVSEVR
Trigger: GCGAACCTCGGACACCAGTTGGGAGTAGAAAAGCCAGTCGTAACATATTCTTAGAGGATGATTTAGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 72 bp AAAGAGCACAGGGAATACCTGCTGGGCAAGTGGGGGTaGTATAATCTTGATGCTTCAAAGAGGCAACAGCTT +
Preference number: 3 (lower is better)
Translates to: KEHREYLLGKWG*YNLDASKRQQL
Trigger: AAGCTGTTGCCTCTTTGAAGCATCAAGATTATACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp CCCTCCGTCAGAAGATGGAATGAAGGGCTTTGCATTAATGTTGGAGGCATAGCGTACTTGGAGGGCTTCTaGATATGGAAGTTCACGTTG +
Preference number: 3 (lower is better)
Translates to: PSVRRWNEGLCINVGGIAYLEGF*IWKFTL
Trigger: CAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTA...CGCTATGCCTCCAACATTAATGCAAAGCCCTTCATTCCATCTTCTGACGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp ATGATGTCCCTCCAAGACGATGACAATGACTCGTTTTaGAGCAACTGCTGGAGTAGGGCCATCATGTGGTTA +
Preference number: 3 (lower is better)
Translates to: MMSLQDDDNDSF*SNCWSRAIMWL
Trigger: TAACCACATGATGGCCCTACTCCAGCAGTTGCTTCAAAACGAGTCATTGTCATCGTCTTGGAGGGACATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp GGACTGTCTGAACAACCTGGCAGACTAGTGACACAATaGTGTCCCTCCAAGACGATGACAATGACTCGTTTT +
Preference number: 3 (lower is better)
Translates to: GLSEQPGRLVTQ*CPSKTMTMTRF
Trigger: AAAACGAGTCATTGTCATCGTCTTGGAGGGACATCATTGTGTCACTAGTCTGCCAGGTTGTTCAGACAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp TATAAAATTTGTGGCAAGTGCCCAAGTGGGGTTTGGTaGGCAGCTGGTCCATGGACACCACTAAATCACCTT +
Preference number: 3 (lower is better)
Translates to: YKICGKCPSGVW*AAGPWTPLNHL
Trigger: AAGGTGATTTAGTGGTGTCCATGGACCAGCTGCTCACCAAACCCCACTTGGGCACTTGCCACAAATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTCATTTCCTGCTTATTTaGCTTGCCCAAAATGAGAGG +
Preference number: 3 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSHFLLI*LAQNER
Trigger: CCTCTCATTTTGGGCAAGCAAAATAAGCAGGAAATG...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CAA 90 bp CTGTTTAAATGTCAAGGCATAAGTCTTTCGTTGATCTTCAGAGGAGGTGACTTCTCATCATCCTGGTGCTaGACATCAGGTCGGACTGTC +
Preference number: 3 (lower is better)
Translates to: LFKCQGISLSLIFRGGDFSSSWC*TSGRTV
Trigger: GACAGTCCGACCTGATGTCAAGCACCAGGATGATGA...GAAGTCACCTCCTCTGAAGATCAACGAAAGACTTATGCCTTGACATTTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp TCCACCACACAGTCACCTCAAGCCAATGCTCAAGAGTaGCCCCATACATACATAGAGGTCAAAGCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: STTQSPQANAQE*PHTYIEVKARK
Trigger: TTTTCTAGCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGACTGTGTGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR GCA 72 bp GAACATGCCTTTAATCCCAGTACTCATAGGGGAAGGTaGTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACA +
Preference number: 3 (lower is better)
Translates to: EHAFNPSTHRGR*FSVSLKPVWST
Trigger: TGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGGATTAAAGGCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR GCA 72 bp ATCCAACCAACGTCCATCAACCATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGTAGCGATGTGTCCATT +
Preference number: 3 (lower is better)
Translates to: IQPTSINHCLSN*YSLCPCSDVSI
Trigger: AATGGACACATCGCTACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 72 bp TCTCTAAAAGCTTTCATCTGGCTTTTGGGATCCTGTTaGTCATCCGTTTGCTGTGAAGTCTCTGGCTGTTCA +
Preference number: 3 (lower is better)
Translates to: SLKAFIWLLGSC*SSVCCEVSGCS
Trigger: TGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCCCAAAAGCCAGATGAAAGCTTTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 72 bp GTGAGCAGCTGGTCCATGGACACCACTAAATCACCTTaGGTCATTCGACTGATTCTTTCTAAAACTTGTGAC +
Preference number: 3 (lower is better)
Translates to: VSSWSMDTTKSP*VIRLILSKTCD
Trigger: GTCACAAGTTTTAGAAAGAATCAGTCGAATGACCCAAGGTGATTTAGTGGTGTCCATGGACCAGCTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp CAGAAAAGGCAAGAGAAACACTCGCATATTATGGGGTaGAAGCATCTGCTCACAGTTCAGGATTTCTGGTCA +
Preference number: 3 (lower is better)
Translates to: QKRQEKHSHIMG*KHLLTVQDFWS
Trigger: TGACCAGAAATCCTGAACTGTGAGCAGATGCTTTCACCCCATAATATGCGAGTGTTTCTCTTGCCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp TTCTTTCCACCTGGGATCTTCTTGATATGGACAAACTaGCGGATATCCATGTCATCATCCTGGTGCTTGACA +
Preference number: 3 (lower is better)
Translates to: FFPPGIFLIWTN*RISMSSSWCLT
Trigger: TGTCAAGCACCAGGATGATGACATGGATATCCGTCAGTTTGTCCATATCAAGAAGATCCCAGGTGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp ATGACCAGAGTAATGCCATGTTCCAGTAACATGTCCTaGGCAATCCGAGACACTGTTTTCTCAACAAGAACC +
Preference number: 3 (lower is better)
Translates to: MTRVMPCSSNMS*AIRDTVFSTRT
Trigger: GGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCTCAGGACATGTTACTGGAACATGGCATTACTCTGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 72 bp ATGACTAACACAATCCAACCAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGCTTGTGCCCTTGTAGC +
Preference number: 3 (lower is better)
Translates to: MTNTIQPTSINH*LSNCYSLCPCS
Trigger: GCTACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGTTGGATTGTGTTAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp TACAATGCAGTTGGGATGTGTTCTCAACCAGTAACGGTGATCTTGAAATTCCATCTTCCCAGCATCCTCTaGAACAGATACGAGTCTTGT +
Preference number: 3 (lower is better)
Translates to: YNAVGMCSQPVTVILKFHLPSIL*NRYESC
Trigger: ACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAAG...ATGGAATTTCAAGATCACCGTTACTGGTTGAGAACACATCCCAACTGCATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp ACCAGTAAATCTGCTCTGGAAAATAATCTCGAGTTGAGCATCTCATCCCCTTTTCCAGTAACGGTGATCTaGAAATTCCATCCCACTGGT +
Preference number: 3 (lower is better)
Translates to: TSKSALENNLELSISSPFPVTVI*KFHPTG
Trigger: ACCAGTGGGATGGAATTTCAAGATCACCGTTACTGG...AAAAGGGGATGAGATGCTCAACTCGAGATTATTTTCCAGAGCAGATTTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CCA 72 bp TCAACCAGTAACGGTGATCTTGAAATTCCATCCCACTaGTGTGATGGCAGATTTTCTTCCACAGATCCTTTA +
Preference number: 3 (lower is better)
Translates to: STSNGDLEIPSH*CDGRFSSTDPL
Trigger: TAAAGGATCTGTGGAAGAAAATCTGCCATCACACCAGTGGGATGGAATTTCAAGATCACCGTTACTGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp CAGGAATTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACACTGACTGAGGTGCGCTaGCTAGGACTGGCAGAATTA +
Preference number: 3 (lower is better)
Translates to: QEFIFLCAMFLVQTKPLTLTEVR*LGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACCTCAGTCAG...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAATTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp CTGTTTAAATGTCAAGGCATAAGTCTTTCGTTGATCTTCAGAGGAGGTGACTTCGAACAGATACGAGTCTaGTTGAAAGAGCACTATTTG +
Preference number: 3 (lower is better)
Translates to: LFKCQGISLSLIFRGGDFEQIRV*LKEHYL
Trigger: CAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTC...GAAGTCACCTCCTCTGAAGATCAACGAAAGACTTATGCCTTGACATTTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR-3UTR CAA 90 bp AATCTTGATGCTTCAAAGAGGCAACAGCTTGTGGAATACTTTTATTGTCTAGTTCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTCGTC +
Preference number: 3 (lower is better)
Translates to: NLDASKRQQLVEYFYCLVLSRRI*RSSSVV
Trigger: GACGACTGAGGATGAACGCAAAATTCTTCTGGACAG...AACTAGACAATAAAAGTATTCCACAAGCTGTTGCCTCTTTGAAGCATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR GCA 72 bp AAGAGAAACACTCGCATATTATGGGGTGAAAGCATCTaGTCACAGTTCAGGATTTCTGGTCATGTTTTAGAT +
Preference number: 3 (lower is better)
Translates to: KRNTRILWGESI*SQFRISGHVLD
Trigger: ATCTAAAACATGACCAGAAATCCTGAACTGTGAGCAGATGCTTTCACCCCATAATATGCGAGTGTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp TTACCTCTCAGCATTTCTCAGAAGCACTGGTCAGTGTaGTGGAAACTTAAAATGAGAGTATCCATACTGAAA +
Preference number: 3 (lower is better)
Translates to: LPLSISQKHWSV*WKLKMRVSILK
Trigger: TTTCAGTATGGATACTCTCATTTTAAGTTTCCATCACACTGACCAGTGCTTCTGAGAAATGCTGAGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CCA 72 bp CAATCCGAGACACTGTTTTCTCAACAAGAACCAATGTaGGTCGAACATCAACTATTCGTTGAACATAATTCT +
Preference number: 3 (lower is better)
Translates to: QSETLFSQQEPM*VEHQLFVEHNS
Trigger: AGAATTATGTTCAACGAATAGTTGATGTTCGACCCACATTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp TTTTGCTTGCCCAAAATGAGAGGTAAATCTAGACTATaGACACATATGCAGATTAAGTGCTGTTTGGCACAT +
Preference number: 3 (lower is better)
Translates to: FCLPKMRGKSRL*THMQIKCCLAH
Trigger: ATGTGCCAAACAGCACTTAATCTGCATATGTGTTCATAGTCTAGATTTACCTCTCATTTTGGGCAAGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp AAGCTTTCATTATTAATTCTTCACTCAGGGCTTCAGTaGCTACAGTTTCATTTCCTGCTTATTTTGCTTGCC +
Preference number: 3 (lower is better)
Translates to: KLSLLILHSGLQ*LQFHFLLILLA
Trigger: GGCAAGCAAAATAAGCAGGAAATGAAACTGTAGTCACTGAAGCCCTGAGTGAAGAATTAATAATGAAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp GTTCCACACAATCTTCAAATCTATACATTCCTTTACTaGTCTTTAACATCACAGCTGGACTCTTCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: VPHNLQIYTFLY*SLTSQLDSSVF
Trigger: GAACACTGAAGAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTGTGTGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR-3UTR CAA 90 bp CAGGAATTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACATTTCTGATTAGCCAGTaGACTAATTCCTTCCCTACA +
Preference number: 3 (lower is better)
Translates to: QEFIFLCAMFLVQTKPLTFLISQ*TNSFPT
Trigger: TGTAGGGAAGGAATTAGTCAACTGGCTAATCAGAAA...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAATTCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR TCA 72 bp ACAGTTTCATTTCCTGCTTATTTTGCTTGCCCAAAATaGGAGGTAAATCTAGACTATGAACACATATGCAGA +
Preference number: 3 (lower is better)
Translates to: TVSFPAYFACPK*EVNLDYEHICR
Trigger: TCTGCATATGTGTTCATAGTCTAGATTTACCTCTCATTTTGGGCAAGCAAAATAAGCAGGAAATGAAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR TCA 72 bp GTATTTGTCTTCAAGTTGATAGGAGAAAATAATGAATaGTGGAGTACCATCCACCCACACAACCAGATTATT +
Preference number: 3 (lower is better)
Translates to: VFVFKLIGENNE*WSTIHPHNQII
Trigger: AATAATCTGGTTGTGTGGGTGGATGGTACTCCATCATTCATTATTTTCTCCTATCAACTTGAAGACAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGATAGAAAGCAGCTCCTaGCTTGCCTCCCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEIESSS*LASPGL
Trigger: CAGGCCCGGGGAGGCAAGTCAGGAGCTGCTTTCTAT...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGCTGCCATTCATGCCCTaGAGTCCAGAGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: NSAGRFPLGLRWASVCMELPFMP*SPERSL
Trigger: CAGGGATCTCTCTGGACTTCAGGGCATGAATGGCAG...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGAGCACAGGGAATACCTaGTGGGCAAGTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKSTGNT*WASGGG
Trigger: ACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCT...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAAAGCAGCTCCTGACTTaGCTCCCCGGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSKQLLT*LPGPAR
Trigger: CCTGGCAGGCCCGGGGAGGCAAGTCAGGAGCTGCTT...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGCATCTTCAGAGCCACTaGCTGAATCCAGATCAGTCG +
Preference number: 4 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEHLQSH*LNPDQS
Trigger: CGACTGATCTGGATTCAGCCAGTGGCTCTGAAGATG...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACGAAGGGAGCTGCCACTaGCCTGCTCCTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHEGSCH*PAPERL
Trigger: GAGCCTCTCAGGAGCAGGTCAGTGGCAGCTCCCTTC...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGACCTCACAGAGGCTTTaGTTCTTGGCAATCAGTGAC +
Preference number: 4 (lower is better)
Translates to: NSAGRFPLGLRWASVCMETSQRL*FLAISD
Trigger: GTCACTGATTGCCAAGAAGCAAAGCCTCTGTGAGGT...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCTCTCCAACCCCTCCTTaGCGGCCTGCCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSSPTPP*RPAQPG
Trigger: ACCAGGTTGGGCAGGCCGGCAAGGAGGGGTTGGAGA...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCACGCAGGGCTCAGCGTTaGCTCTGCGTGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSRRAQR*LCVCTG
Trigger: ACCAGTACACACGCAGAGCCAACGCTGAGCCCTGCG...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGACTTTTCCTTCACCTaGCTGTCTGTGGATCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKDFSFT*LSVDPS
Trigger: GCTGGGATCCACAGACAGCCAGGTGAAGGAAAAGTC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGTGGAGAGACCACAGTTaGCATTTTACCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEWRDHS*HFTLSS
Trigger: GGAGGACAAGGTAAAATGCCAACTGTGGTCTCTCCA...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGAAGGCATCACTTATTaGGAGCTGCTGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKEGITY*ELLSSS
Trigger: ACTGGAGGACAGCAGCTCTCAATAAGTGATGCCTTC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGAGTTCCAGGTTGTTATaGTGCCAGCCCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKSSRLL*CQPKGV
Trigger: TACCCCTTTGGGCTGGCATCATAACAACCTGGAACT...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGAGGACTGGGAGGAACTaGAGGCCTCTTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKRTGRN*RPLSTF
Trigger: AAAGGTAGAAAGAGGCCTTCAGTTCCTCCCAGTCCT...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp GGGTACTTGGAGGGCTTCTTGATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGGCTGATAGAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GYLEGFLIWKFT*SSSTFRLIEAA
Trigger: AGCCGCTTCTATCAGCCTGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp GGATCCTGTTGCTCATCCGTTTGCTGTGAAGTCTCTGGCTGTTCATTTCCTACGCACAGACTGTGTTCTTaGAGGGATCTGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSCCSSVCCEVSGCSFPTHRLCS*RDLRAG
Trigger: GCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTG...CGTAGGAAATGAACAGCCAGAGACTTCACAGCAAACGGATGAGCAACAGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACCCAAGTGGGGTTTGGTaGGCAGCTGGTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHPSGVW*AAGPWT
Trigger: TGTCCATGGACCAGCTGCTCACCAAACCCCACTTGG...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCTCATGGTGGATAGAGTaGCCGCAGGGCTCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSSWWIE*PQGSAL
Trigger: CAACGCTGAGCCCTGCGGTCACTCTATCCACCATGA...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGGAAGACATGAGCCTTaGTTGCATCTTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKGRHEP*LHLLCP
Trigger: TGGACAGAGAAGATGCAAGCAAGGCTCATGTCTTCC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGCTTTCATCTGGCTTTTaGGATCCTGTTGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKLSSGF*DPVAHP
Trigger: CGGATGAGCAACAGGATCCCAAAAGCCAGATGAAAG...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGCCCTGTCCAGTGGTCTaGCACCATCAAGAAATACTT +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKPCPVV*HHQEIL
Trigger: AAGTATTTCTTGATGGTGCCAGACCACTGGACAGGG...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTCACAGACTGTGTTCTTaGAGGGATCTGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSHRLCS*RDLRAG
Trigger: GCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTG...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCGTCCAGAGAGATCCCTaGGCAGCTGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSVQRDP*AAVSSS
Trigger: GGAGGAAGAAACAGCTGCTCAGGGATCTCTCTGGAC...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGGGGTCCAAATGTTTTaGCTGAATTCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKGVQMF*LNSSSS
Trigger: AGAGGAGGAAGAATTCAGTCAAAACATTTGGACCCC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTGGGCAGAAGAGCTGCTaGAGAGCACACAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELGQKSC*RAHRAS
Trigger: AGAGGCTCTGTGTGCTCTTCAGCAGCTCTTCTGCCC...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGAGAGGCTTTGCTTCTTaGCAATCAGTGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: NSAGRFPLGLRWASVCMERGFAS*QSVTQK
Trigger: TTTTTGAGTCACTGATTGCCAAGAAGCAAAGCCTCT...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTCTGCTGTTCCACGCCTaGAGCACCTCACAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELLLFHA*STSQRL
Trigger: AAGCCTCTGTGAGGTGCTCCAGGCGTGGAACAGCAG...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGCAAAGATGGCTTTCATaGTTGACTTTTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEQRWLS*LTFPSP
Trigger: AGGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTG...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCATCCATCCCACTGGTGTaGTGGCAGATTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSSIPLV*WQIFFH
Trigger: GTGGAAGAAAATCTGCCATCACACCAGTGGGATGGA...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCATCCCTGCTGTTCCTCTaGAGAAGGACAACATTCCTG +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSSLLFL*RRTTFL
Trigger: CAGGAATGTTGTCCTTCTTCAGAGGAACAGCAGGGA...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGCATTTGCTTCAGAATaGATCTATCATCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKAFASE*IYHLRW
Trigger: CCACCGAAGATGATAGATTCATTCTGAAGCAAATGC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CAAAAAGAGCACAGGGAATACCTGCTGGGCAAGTGGGGGTGGTATAATCTTGATACTGAAGAGCGCCGGTaGAGCTCCTCATTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QKEHREYLLGKWGWYNLDTEERR*SSSLSC
Trigger: ACAGCTTAATGAGGAGCTCCACCGGCGCTCTTCAGT...ATCAAGATTATACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCTCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR CCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTGGGCGTCGCTGTGGATaGAGGTTCTCAGCACAGATT +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELGRRCG*RFSAQI
Trigger: AATCTGTGCTGAGAACCTCCATCCACAGCGACGCCC...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACAAATGGGCGTCGCTGTaGATGGAGGTTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHKWASL*MEVLST
Trigger: TGTGCTGAGAACCTCCATCCACAGCGACGCCCATTT...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp GGTAACTGGGAGGAGTCTAGCCTGAAAGTCAGAAGCTaGGGACAATGTCTACAAACCTTCCCACCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GNWEESSLKVRS*GQCLQTFPPSF
Trigger: GAAGCTAGGTGGGAAGGTTTGTAGACATTGTCCCAAGCTTCTGACTTTCAGGCTAGACTCCTCCCAGTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp TCCACTGTGGACTGGAAACTGCTGACTGAGGTGCGCTaGCTAGGACTGGCAGAATTAGCCAAATTATCGTCA +
Preference number: 4 (lower is better)
Translates to: STVDWKLLTEVR*LGLAELAKLSS
Trigger: TGACGATAATTTGGCTAATTCTGCCAGTCCTAGCAAGCGCACCTCAGTCAGCAGTTTCCAGTCCACAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGGGCACTCAGGATCCTaGGGAAGGGAGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYGHSGS*GRELPL
Trigger: CAGTGGCAGCTCCCTTCCTCAGGATCCTGAGTGCCC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACGTTCAGCAATCCTGGTaGTCACTAGCTCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHVQQSW*SLAHVR
Trigger: CCTCACATGAGCTAGTGAGCACCAGGATTGCTGAAC...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGGCTCAGCGTTGGCTCTaGGTGTGTACTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQAQRWL*VCTGGH
Trigger: ATGGCCACCAGTACACACGCAGAGCCAACGCTGAGC...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTCTCCAACCCCTCCTTaGCGGCCTGCCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYSPTPP*RPAQPG
Trigger: ACCAGGTTGGGCAGGCCGGCAAGGAGGGGTTGGAGA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACGTCTTTAAACCAGGATaGCTCGGAGTGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHVFKPG*LGVSFH
Trigger: GTGGAAGGACACTCCGAGCCATCCTGGTTTAAAGAC...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGATGCATCTTTTGAATaGACAAAGGGGTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: LRESGPRGLETTTMSTTKDASFE*TKGSKC
Trigger: ACATTTGGACCCCTTTGTCCATTCAAAAGATGCATC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGTGGGCAGCTGGAGGTaGGTGGAGCTCGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYVGSWR*VELVEL
Trigger: GAGCTCTACGAGCTCCACCCACCTCCAGCTGCCCAC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGGAGGAGTGGGCAGCTaGAGGTGGGTGGAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYGGVGS*RWVELV
Trigger: TACGAGCTCCACCCACCTCCAGCTGCCCACTCCTCC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTAAGGTCTCCCTCTTCTaGGAAGACAGATCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELKVSLF*EDRSGL
Trigger: GAGCCCTGATCTGTCTTCCCAGAAGAGGGAGACCTT...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp GGGAATACCTGCTGGGCAAGTGGGGGTGGTATAATCTaGATGCTTCAAAGAGGCAACAGCTTGTGGAATACT +
Preference number: 4 (lower is better)
Translates to: GNTCWASGGGII*MLQRGNSLWNT
Trigger: AGTATTCCACAAGCTGTTGCCTCTTTGAAGCATCAAGATTATACCACCCCCACTTGCCCAGCAGGTATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCCACTGACCTGCTCCTaGGAGGCTCCCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYPLTCS*EAPSSP
Trigger: AGGTGAAGAGGGAGCCTCTCAGGAGCAGGTCAGTGG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATATAGAAAGCAGCTCCTaGCTTGCCTCCCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYIESSS*LASPGL
Trigger: CAGGCCCGGGGAGGCAAGTCAGGAGCTGCTTTCTAT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACTCTGGCATCCAATATTaGTTCAGGTCACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHSGIQY*FRSLSW
Trigger: CCAGGACAGTGACCTGAAGCAATATTGGATGCCAGA...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCTTTTTCTACAGTAGGTaGATGCTCGGAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSFFYSR*MLGGLL
Trigger: CAGGAGACCTCCGAGCATGCACCTACTGTAGAAAAA...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCATCACTTATTGAGAGCTaGTGTCCTCCAGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSSLIES*CPPVSE
Trigger: TTCTGACACTGGAGGACAGCAGCTCTCAATAAGTGA...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTTGTTGCTCATCCGTTTaGTGTGAAGTCTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSCCSSV*CEVSGC
Trigger: ACAGCCAGAGACTTCACAGCAAACGGATGAGCAACA...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAAGCAGCTCCTGACTTaGCTCCCCGGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFKQLLT*LPGPAR
Trigger: CCTGGCAGGCCCGGGGAGGCAAGTCAGGAGCTGCTT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTTTTTCTACTCCCAACTaGTGTCCGAGGTTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELFSTPN*CPRFAW
Trigger: CCAAGCGAACCTCGGACACCAGTTGGGAGTAGAAAA...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCATCCCTACAATGCAGTTaGGATGTGTTCTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSSLQCS*DVFSTS
Trigger: ACTGGTTGAGAACACATCCCAACTGCATTGTAGGGA...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTTCCATGTCATCATCCTaGTGCTTGACATCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELSMSSS*CLTSGR
Trigger: CCGACCTGATGTCAAGCACCAGGATGATGACATGGA...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAAGTGGGCAGCTGGAGGTaGGTGGAGCTCGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKVGSWR*VELVEL
Trigger: GAGCTCTACGAGCTCCACCCACCTCCAGCTGCCCAC...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp TTCCAGGTTGTTATGATGCCAGCCCAAAGGGGTAAAAGGCAGCTCTTTGGATTTGTTTCAATACTGTGCTaGGGCTTCGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: FQVVMMPAQRGKRQLFGFVSILC*GFEAEQ
Trigger: CTGTTCAGCTTCGAAGCCTCAGCACAGTATTGAAAC...AAATCCAAAGAGCTGCCTTTTACCCCTTTGGGCTGGCATCATAACAACCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCGACAGATGTCTCATATaGAGGAACCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSDRCLI*RNHRRT
Trigger: GGTTCTCCTATGGTTCCTTCATATGAGACATCTGTC...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCCAAGTGGGGTTTGGTaGGCAGCTGGTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYPSGVW*AAGPWT
Trigger: TGTCCATGGACCAGCTGCTCACCAAACCCCACTTGG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGAAGGGAGCTGCCACTaGCCTGCTCCTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFEGSCH*PAPERL
Trigger: GAGCCTCTCAGGAGCAGGTCAGTGGCAGCTCCCTTC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGGGCACTCAGGATCCTaGGGAAGGGAGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFGHSGS*GRELPL
Trigger: CAGTGGCAGCTCCCTTCCTCAGGATCCTGAGTGCCC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACATGGAGAGGCAACAATaGCTCTGGTACCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHMERQQ*LWYQCK
Trigger: TTTGCATTGGTACCAGAGTCATTGTTGCCTCTCCAT...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGCCTACGGCATCCTGTTaGTCCATATGGAGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQPTASC*SIWRGN
Trigger: GTTGCCTCTCCATATGGATCAACAGGATGCCGTAGG...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACCCTTCACCTCTTTGTTaGGAAGAGGAGACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHPSPLC*EEETSK
Trigger: TTTACTGGTCTCCTCTTCTCAACAAAGAGGTGAAGG...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGGGCAGAAGAGCTGCTaGAGAGCACACAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYGQKSC*RAHRAS
Trigger: AGAGGCTCTGTGTGCTCTTCAGCAGCTCTTCTGCCC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGTCCTTCTGGAGTCTGTaGTCTCCTGAGGATGTGGCA +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQSFWSL*SPEDVA
Trigger: TGCCACATCCTCAGGAGAGCACAGACTCCAGAAGGA...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTGGCAAGTGCCCAAGTaGGGTTTGGTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYWQVPK*GLVSSW
Trigger: CCAGCTGCTCACCAAACCCCACTTGGGCACTTGCCA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCGCAGGGCTCAGCGTTaGCTCTGCGTGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFRRAQR*LCVCTG
Trigger: ACCAGTACACACGCAGAGCCAACGCTGAGCCCTGCG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCTGCTGTTCCACGCCTaGAGCACCTCACAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYLLFHA*STSQRL
Trigger: AAGCCTCTGTGAGGTGCTCCAGGCGTGGAACAGCAG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGGGAGGAGTGGGCAGCTaGAGGTGGGTGGAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRGGVGS*RWVELV
Trigger: TACGAGCTCCACCCACCTCCAGCTGCCCACTCCTCC...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCTCCGCAGAGTTGCTTTaGACAATTCCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSSAELL*TIPLRH
Trigger: ATGCCTTAGAGGAATTGTCCAAAGCAACTCTGCGGA...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTaGAAGCCAGTCTGGTCAACAGAGTTGAGTTCAACT +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVS*KPVWSTELSST
Trigger: AGTTGAACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGCCACTGACCTGCTCCTaGGAGGCTCCCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRPLTCS*EAPSSP
Trigger: AGGTGAAGAGGGAGCCTCTCAGGAGCAGGTCAGTGG...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACAGACCAGGATTCATTTaGAAGAGCAACAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHRPGFI*KSNNWC
Trigger: ACACCAGTTGTTGCTCTTTCAAATGAATCCTGGTCT...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCATGGTGGATAGAGTaGCCGCAGGGCTCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSWWIE*PQGSAL
Trigger: CAACGCTGAGCCCTGCGGTCACTCTATCCACCATGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTCTTCTTGGCAATCAGTaGCTCAAAAATGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELLLGNQ*LKNGLQ
Trigger: CTGCAGTCCATTTTTGAGTCACTGATTGCCAAGAAG...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACGATTACAACAACGACTaGAGAAAATCTGCCCACACA +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHDYNND*RKSAHT
Trigger: TGTGTGGGCAGATTTTCTGCAGTCGTTGTTGTAATC...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCCTGGTGTTACTTGTTTaGAGATTCTGCACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSLVLLV*RFCTRN
Trigger: ATTCCTGGTGCAGAATCTGCAAACAAGTAACACCAG...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGCTCAGCGTTGGCTCTaGGTGTGTACTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFAQRWL*VCTGGH
Trigger: ATGGCCACCAGTACACACGCAGAGCCAACGCTGAGC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGATCAGGGCTCTTCCCTaGTGTTCCTCTGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQIRALP*CSSEEG
Trigger: TCCTTCTTCAGAGGAACAGCAGGGAAGAGCCCTGAT...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAATTGAAGTAGTGTGGTaGAAAGTCAAGGAAAGACTG +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSIEVVW*KVKERL
Trigger: CAGTCTTTCCTTGACTTTGCACCACACTACTTCAAT...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCTGAACAGCTGTACGTaGGTCATGACCTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYLNSCT*VMTSTG
Trigger: GCCTGTGGAGGTCATGACCCACGTACAGCTGTTCAG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTTGGCAAGTGCCCAAGTaGGGTTTGGTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSWQVPK*GLVSSW
Trigger: CCAGCTGCTCACCAAACCCCACTTGGGCACTTGCCA...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAACACTGGGAGCATTGCTaGACTGGGCAGAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKHWEHC*TGQKSC
Trigger: GCAGCTCTTCTGCCCAGTCCAGCAATGCTCCCAGTG...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp GCAGTTGGGATGTGTTCTCAACCAGTAACGGTGATCTaGAAATTCCATCCCACTGGTGTGATGGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: AVGMCSQPVTVI*KFHPTGVMADF
Trigger: AAAATCTGCCATCACACCAGTGGGATGGAATTTCAAGATCACCGTTACTGGTTGAGAACACATCCCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 72 bp TCCTGTAAAGGGTCTCTAAAAGCTTTCATCTGGCTTTaGGGATCCTGTTGCTCATCCGTTTGCTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SCKGSLKAFIWL*GSCCSSVCCEV
Trigger: GACTTCACAGCAAACGGATGAGCAACAGGATCCCAAAAGCCAGATGAAAGCTTTTAGAGACCCTTTACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAACTGAGGCTTCGAAGCTaGACAGCTGTACGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKLRLRS*TAVRGS
Trigger: TGACCCACGTACAGCTGTTCAGCTTCGAAGCCTCAG...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGGTTTCAATACTGTGCTaGGGCTTCGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQVSILC*GFEAEQ
Trigger: CTGTTCAGCTTCGAAGCCTCAGCACAGTATTGAAAC...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCATCATCCTGGTGCTTaGCATCAGGTCGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYHHPGA*HQVGLS
Trigger: AGACAGTCCGACCTGATGTCAAGCACCAGGATGATG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCCTACGGCATCCTGTTaGTCCATATGGAGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYPTASC*SIWRGN
Trigger: GTTGCCTCTCCATATGGATCAACAGGATGCCGTAGG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGTCCAGAGAGATCCCTaGGCAGCTGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFVQRDP*AAVSSS
Trigger: GGAGGAAGAAACAGCTGCTCAGGGATCTCTCTGGAC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCTGCCATTCATGCCCTaGAGTCCAGAGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFLPFMP*SPERSL
Trigger: CAGGGATCTCTCTGGACTTCAGGGCATGAATGGCAG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACTCCAAATGTTTTGACTaGATTCTTCCTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHSKCFD*ILPPLA
Trigger: AGCTAGAGGAGGAAGAATTCAGTCAAAACATTTGGA...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATATGGACTGCAGTTGCTaGGGGGTATCCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYMDCSC*GVSTEE
Trigger: TTCCTCTGTGGATACCCCTCAGCAACTGCAGTCCAT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGCTGATAGAAGCGGCTaGGTCACTGTCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFADRSG*VTVHCG
Trigger: TCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TCCCTACAATGCAGTTGGGATGTGTTCTCAACCAGTAACGGTGATCTTGAAATTTTTTTCTACAGTAGGTaGATGCTCGGAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLQCSWDVFSTSNGDLEIFFYSR*MLGGLL
Trigger: CAGGAGACCTCCGAGCATGCACCTACTGTAGAAAAA...AATTTCAAGATCACCGTTACTGGTTGAGAACACATCCCAACTGCATTGTAGGGA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAGCACAGGGAATACCTaGTGGGCAAGTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSTGNT*WASGGG
Trigger: ACCACCCCCACTTGCCCAGCAGGTATTCCCTGTGCT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCATTCTTTACAACTGAGTaGAAAAGCAATGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSFFTTE*KSNDGA
Trigger: AGCTCCATCATTGCTTTTGCACTCAGTTGTAAAGAA...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATACTGAAGAGCGCCGGTaGAGCTCCTCATTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYTEERR*SSSLSC
Trigger: ACAGCTTAATGAGGAGCTCCACCGGCGCTCTTCAGT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCACTGGGAGCATTGCTaGACTGGGCAGAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFHWEHC*TGQKSC
Trigger: GCAGCTCTTCTGCCCAGTCCAGCAATGCTCCCAGTG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp TCCCTACAATGCAGTTGGGATGTGTTCTCAACCAGTAACGGTGATCTTGAAATTTGCTCGGAGGTCTCCTaGCTTTTTCCTTCCATGATT +
Preference number: 4 (lower is better)
Translates to: SLQCSWDVFSTSNGDLEICSEVS*LFPSMI
Trigger: AATCATGGAAGGAAAAAGCCAGGAGACCTCCGAGCA...AATTTCAAGATCACCGTTACTGGTTGAGAACACATCCCAACTGCATTGTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 72 bp AAATCAGCTGGCATTTCAAACCAGACACAAAAGCCTTaGTCCCAGGAAGCACAGAAAGTGTGTTCCACACAA +
Preference number: 4 (lower is better)
Translates to: KSAGISNQTQKP*SQEAQKVCSTQ
Trigger: TTGTGTGGAACACACTTTCTGTGCTTCCTGGGACAAAGGCTTTTGTGTCTGGTTTGAAATGCCAGCTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp GCAGTTGCTAAACACAAGCAGCCAGGAGTCACACATTaGTACCACGCAAAACAGTTCAATTATGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: AVAKHKQPGVTH*YHAKQFNYVFP
Trigger: GGGAAACACATAATTGAACTGTTTTGCGTGGTACAAATGTGTGACTCCTGGCTGCTTGTGTTTAGCAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp ACTAACACAATCCAACCAACGTCCATCAACCATTGCTaGTCCAATTGCTATAGCTTGTGCCCTTGTAGCGAT +
Preference number: 4 (lower is better)
Translates to: TNTIQPTSINHC*SNCYSLCPCSD
Trigger: ATCGCTACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGTTGGATTGTGTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCACAGACTGTGTTCTTaGAGGGATCTGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFHRLCS*RDLRAG
Trigger: GCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGAGGCTTCGAAGCTaGACAGCTGTACGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLRLRS*TAVRGS
Trigger: TGACCCACGTACAGCTGTTCAGCTTCGAAGCCTCAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATACCAGACCGATCCAGTaGCAGATTAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYTRPIQ*QISNAG
Trigger: GCCAGCATTACTAATCTGTCACTGGATCGGTCTGGT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGAAGGCATCACTTATTaGGAGCTGCTGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYEGITY*ELLSSS
Trigger: ACTGGAGGACAGCAGCTCTCAATAAGTGATGCCTTC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAGTTCCAGGTTGTTATaGTGCCAGCCCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYSSRLL*CQPKGV
Trigger: TACCCCTTTGGGCTGGCATCATAACAACCTGGAACT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTTCAGGTCGGACTGTCTaGACAACCTGGCAGACTAGT +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSSGRTV*TTWQTS
Trigger: ACTAGTCTGCCAGGTTGTTCAGACAGTCCGACCTGA...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCAGGTCGGACTGTCTaGACAACCTGGCAGACTAGT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSGRTV*TTWQTS
Trigger: ACTAGTCTGCCAGGTTGTTCAGACAGTCCGACCTGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTTTGATATGGACAAACTaGCGGATATCCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELLIWTN*RISMSS
Trigger: TGATGACATGGATATCCGTCAGTTTGTCCATATCAA...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCCACAGAGGAAGACATaGGCCTTGCTTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYPQRKT*ALLASS
Trigger: AGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTGG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGGAAACTGCTGACTaGGGTGCGCTTGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLETAD*GALART
Trigger: AGTCCTAGCAAGCGCACCTCAGTCAGCAGTTTCCAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGTTCAGCAATCCTGGTaGTCACTAGCTCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYVQQSW*SLAHVR
Trigger: CCTCACATGAGCTAGTGAGCACCAGGATTGCTGAAC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCAAGCACTGGGAGCATTaGTGGACTGGGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLKHWEH*WTGQKS
Trigger: GCTCTTCTGCCCAGTCCAGCAATGCTCCCAGTGCTT...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAAGCACTGGGAGCATTaGTGGACTGGGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFKHWEH*WTGQKS
Trigger: GCTCTTCTGCCCAGTCCAGCAATGCTCCCAGTGCTT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACTGGAGATGTGTCCATTaGATTTATCTTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHWRCVH*IYLAFF
Trigger: GAAGAAAGCAAGATAAATGCAATGGACACATCTCCA...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGTTCTGCTTCTACTGTaGGGTTTGTCTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYVLLLL*GLSVLH
Trigger: GTGGAGGACAGACAAACCGCACAGTAGAAGCAGAAC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGAACAGCTGTACGTaGGTCATGACCTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLNSCT*VMTSTG
Trigger: GCCTGTGGAGGTCATGACCCACGTACAGCTGTTCAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTTTTCTACTCCCAACTaGTGTCCGAGGTTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYFSTPN*CPRFAW
Trigger: CCAAGCGAACCTCGGACACCAGTTGGGAGTAGAAAA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACAAATTTCTTTCCACCTaGGATCTTCTTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHKFLST*DLLDMD
Trigger: GTCCATATCAAGAAGATCCCAGGTGGAAAGAAATTT...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGTTGATATCCAGGCACTaGAGAATCCAACTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQLISRH*RIQLLQ
Trigger: CTGAAGGAGTTGGATTCTCCAGTGCCTGGATATCAA...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCAGTCTCCCAGGACTaGGAGGAACTGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSVSQD*EELKAS
Trigger: AGAGGCCTTCAGTTCCTCCCAGTCCTGGGAGACTGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCATCTTCAGAGCCACTaGCTGAATCCAGATCAGTCG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYHLQSH*LNPDQS
Trigger: CGACTGATCTGGATTCAGCCAGTGGCTCTGAAGATG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTCACCTGGCTGTCTGTaGATCCCAGCAAATGACCAT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYSPGCL*IPANDH
Trigger: ATGGTCATTTGCTGGGATCCACAGACAGCCAGGTGA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCAAGGTCTCCCTCTTCTaGGAAGACAGATCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFKVSLF*EDRSGL
Trigger: GAGCCCTGATCTGTCTTCCCAGAAGAGGGAGACCTT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAATAATTGAAGTAGTGTaGTGCAAAGTCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSIIEVV*CKVKER
Trigger: TCTTTCCTTGACTTTGCACCACACTACTTCAATTAT...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTTTCTCAGCACAGATTTaGAATGGGAACGAATATAGA +
Preference number: 4 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSFSAQI*NGNEYR
Trigger: TCTATATTCGTTCCCATTCCAAATCTGTGCTGAGAA...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGGGCGTCGCTGTGGATaGAGGTTCTCAGCACAGATT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFGRRCG*RFSAQI
Trigger: AATCTGTGCTGAGAACCTCCATCCACAGCGACGCCC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
3UTR CAA 72 bp CTTGAACAGATACGAGTCTTGTTGAAAGAGCACTATTaGAGGAATCCGGATGAATCAAGCTTTGCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LEQIRVLLKEHY*RNPDESSFARL
Trigger: TAGCCTGGCAAAGCTTGATTCATCCGGATTCCTCAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 72 bp ACTTCCCAGCATCCTCTTGAACAGATACGAGTCTTGTaGAAAGAGCACTATTTGAGGAATCCGGATGAATCA +
Preference number: 4 (lower is better)
Translates to: TSQHPLEQIRVL*KEHYLRNPDES
Trigger: TGATTCATCCGGATTCCTCAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
3UTR CAA 72 bp TTTTATTGTCTAGTTCACCCTTCTCTAGCACAGTCCTaGATTCCAACAAAGTGCTATCCTCAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: FYCLVHPSLAQS*IPTKCYPQKTG
Trigger: CCCTGTCTTCTGAGGATAGCACTTTGTTGGAATCAAGGACTGTGCTAGAGAAGGGTGAACTAGACAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGTTTCAATACTGTGCTaGGGCTTCGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYVSILC*GFEAEQ
Trigger: CTGTTCAGCTTCGAAGCCTCAGCACAGTATTGAAAC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTACCAGACCGATCCAGTaGCAGATTAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSTRPIQ*QISNAG
Trigger: GCCAGCATTACTAATCTGTCACTGGATCGGTCTGGT...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCCATCCCACTGGTGTaGTGGCAGATTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSIPLV*WQIFFH
Trigger: GTGGAAGAAAATCTGCCATCACACCAGTGGGATGGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGACAATGACTCGTTTTaGAGCAACTGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYDNDSF*SNCWSR
Trigger: CCTACTCCAGCAGTTGCTTCAAAACGAGTCATTGTC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTCCAGTAACATGTCCTaGGCAATCCGAGACACTGTT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYSSNMS*AIRDTV
Trigger: AACAGTGTCTCGGATTGCTCAGGACATGTTACTGGA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAACCACAGAGGAAGACATaGGCCTTGCTTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKPQRKT*ALLASS
Trigger: AGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTGG...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATGGACTGCAGTTGCTaGGGGGTATCCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFMDCSC*GVSTEE
Trigger: TTCCTCTGTGGATACCCCTCAGCAACTGCAGTCCAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCAGGACTGGGAGGAACTaGAGGCCTCTTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFRTGRN*RPLSTF
Trigger: AAAGGTAGAAAGAGGCCTTCAGTTCCTCCCAGTCCT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTTCCACAGGCTGGTTCTaGTTTCCTTCTGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSSTGWF*FPSGVC
Trigger: ACAGACTCCAGAAGGAAAGCAGAACCAGCCTGTGGA...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATATGTCATCATCCTGGTaGTTGACATCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYMSSSW*LTSGRT
Trigger: AGTCCGACCTGATGTCAAGCACCAGGATGATGACAT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTGTTGCTCATCCGTTTaGTGTGAAGTCTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYCCSSV*CEVSGC
Trigger: ACAGCCAGAGACTTCACAGCAAACGGATGAGCAACA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCACTTGGCCTGAACACTaGCATTCATGCCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFTWPEH*HSCPEV
Trigger: GACTTCAGGGCATGAATGGCAGTGTTCAGGCCAAGT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGGGTGTCACAGAACATaGTCGGACACTGGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFGCHRT*SDTGKK
Trigger: CTTCTTACCAGTGTCCGAGCATGTTCTGTGACACCC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGTTCTGCTTCTACTGTaGGGTTTGTCTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFVLLLL*GLSVLH
Trigger: GTGGAGGACAGACAAACCGCACAGTAGAAGCAGAAC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTATTCCTCCTCACTGCTaGCCAGAATCACTTCACGCA +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSIPPHC*PESLHA
Trigger: TGCGTGAAGTGATTCTGGGCAGCAGTGAGGAGGAAT...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTCAAATCAAAAACCTGTaGCATCTTTCTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELQIKNL*HLSPIE
Trigger: TTCTATGGGAGAAAGATGGCACAGGTTTTTGATTTG...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCGAAATACTTGTCCATTaGTTCACAAAATCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSEILVH*FTKSSP
Trigger: AGGACTAGATTTTGTGAAGCAATGGACAAGTATTTC...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTACTGAAGAGCGCCGGTaGAGCTCCTCATTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFTEERR*SSSLSC
Trigger: ACAGCTTAATGAGGAGCTCCACCGGCGCTCTTCAGT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCCACACAGTCTGCAATaGTGTCTGCGCCTAAATGTT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYPHSLQ*CLRLNV
Trigger: AACATTTAGGCGCAGACACCATTGCAGACTGTGTGG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGTCTTTAAACCAGGATaGCTCGGAGTGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFVFKPG*LGVSFH
Trigger: GTGGAAGGACACTCCGAGCCATCCTGGTTTAAAGAC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCCATGTCATCATCCTaGTGCTTGACATCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSMSSS*CLTSGR
Trigger: CCGACCTGATGTCAAGCACCAGGATGATGACATGGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGATGTTCAGCAATCCTaGTGCTCACTAGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYDVQQS*CSLAHV
Trigger: CACATGAGCTAGTGAGCACCAGGATTGCTGAACATC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATATTCTACCCAAGGTCTaGCTGTCACCCAGATGTTCA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYILPKV*LSPRCS
Trigger: TGAACATCTGGGTGACAGCCAGACCTTGGGTAGAAT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGACTTTTCCTTCACCTaGCTGTCTGTGGATCCCAGC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFDFSFT*LSVDPS
Trigger: GCTGGGATCCACAGACAGCCAGGTGAAGGAAAAGTC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTTGGATCAAAAGGAAATaGAATGGGATTGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELWIKRK*NGIVAV
Trigger: AACAGCTACAATCCCATTCCATTTCCTTTTGATCCA...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAAATGGGCGTCGCTGTaGATGGAGGTTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFKWASL*MEVLST
Trigger: TGTGCTGAGAACCTCCATCCACAGCGACGCCCATTT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCCCTGTCCAGTGGTCTaGCACCATCAAGAAATACTT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYPCPVV*HHQEIL
Trigger: AAGTATTTCTTGATGGTGCCAGACCACTGGACAGGG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp ACCAGTAAATCTGCTCTGGAAAATAATCTCGAGTTGAGCATCTCATCCCCTTTTGTTCTGCTTTCCTTCTaGAGTCTAACACTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TSKSALENNLELSISSPFVLLSF*SLTLKS
Trigger: GCTCTTCAGTGTTAGACTCCAGAAGGAAAGCAGAAC...AAAAGGGGATGAGATGCTCAACTCGAGATTATTTTCCAGAGCAGATTTACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGTCCACTGTGGACTaGAAACTGCTGACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLSTVD*KLLTEV
Trigger: CACCTCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
3UTR CAA 72 bp TGCTTCAAAGAGGCAACAGCTTGTGGAATACTTTTATaGTCTAGTTCACCCTTCTCTAGCACAGTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: CFKEATACGILL*SSSPFSSTVLD
Trigger: ATCAAGGACTGTGCTAGAGAAGGGTGAACTAGACAATAAAAGTATTCCACAAGCTGTTGCCTCTTTGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTTCCCAGCATCCTCTTaGACAGATACGAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYFPASS*TDTSLV
Trigger: AACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAATCCAGTAACATGTCCTaGGCAATCCGAGACACTGTT +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKSSNMS*AIRDTV
Trigger: AACAGTGTCTCGGATTGCTCAGGACATGTTACTGGA...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGACCTTCAGTGGGGCTTaGCGCTTAATGAATATTTTT +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQTFSGA*RLMNIF
Trigger: AAAAATATTCATTAAGCGTCAAGCCCCACTGAAGGT...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCCCTGCTGTTCCTCTaGAGAAGGACAACATTCCTG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSLLFL*RRTTFL
Trigger: CAGGAATGTTGTCCTTCTTCAGAGGAACAGCAGGGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGCGACTGCAGAAAATCTaGCCACACAGTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRRLQKI*PHSLQW
Trigger: CCATTGCAGACTGTGTGGGCAGATTTTCTGCAGTCG...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTACTTGGCCTGAACACTaGCATTCATGCCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFTWPEH*HSCPEV
Trigger: GACTTCAGGGCATGAATGGCAGTGTTCAGGCCAAGT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGGGGTGTCACAGAACATaGTCGGACACTGGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRGCHRT*SDTGKK
Trigger: CTTCTTACCAGTGTCCGAGCATGTTCTGTGACACCC...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAAGACATGAGCCTTGCTTaGATCTTCTCTGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKDMSLA*IFSVQF
Trigger: GAACTGGACAGAGAAGATGCAAGCAAGGCTCATGTC...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATCAGGGCTCTTCCCTaGTGTTCCTCTGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFIRALP*CSSEEG
Trigger: TCCTTCTTCAGAGGAACAGCAGGGAAGAGCCCTGAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATTCCTCCTCACTGCTaGCCAGAATCACTTCACGCA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFIPPHC*PESLHA
Trigger: TGCGTGAAGTGATTCTGGGCAGCAGTGAGGAGGAAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAACCACACAGTCTGCAATaGTGTCTGCGCCTAAATGTT +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKPHSLQ*CLRLNV
Trigger: AACATTTAGGCGCAGACACCATTGCAGACTGTGTGG...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGCAACAAGAACCAATGTaGGTCGAACATCAACTATTC +
Preference number: 4 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQQQEPM*VEHQLF
Trigger: GAATAGTTGATGTTCGACCCACATTGGTTCTTGTTG...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTCTGGGCAAGTGGGGGTaGTATAATCTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSLGKWG*YNLDAS
Trigger: TGAAGCATCAAGATTATACCACCCCCACTTGCCCAG...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCTGGGCAAGTGGGGGTaGTATAATCTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFLGKWG*YNLDAS
Trigger: TGAAGCATCAAGATTATACCACCCCCACTTGCCCAG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGTCACCTGGCTGTCTGTaGATCCCAGCAAATGACCAT +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRSPGCL*IPANDH
Trigger: ATGGTCATTTGCTGGGATCCACAGACAGCCAGGTGA...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCTCACAGACAGCAATaGGCACCCGTTCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSHRQQ*APVHVH
Trigger: ATGAACATGAACGGGTGCCCATTGCTGTCTGTGAGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAATTCCCAGCATCCTCTTaGACAGATACGAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKFPASS*TDTSLV
Trigger: AACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAA...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGGGGTCCAAATGTTTTaGCTGAATTCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFGVQMF*LNSSSS
Trigger: AGAGGAGGAAGAATTCAGTCAAAACATTTGGACCCC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAAGTCTTTGAGGTCCTaGAGAAGAGATACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYKSLRS*RRDTFS
Trigger: ACTGAAGGTATCTCTTCTTCAGGACCTCAAAGACTT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATACCTGTGAAACCTTCTaGAAAAAGTCTTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYTCETF*KKSLRS
Trigger: GGACCTCAAAGACTTTTTTCAGAAGGTTTCACAGGT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGTGGATCCCAGCAAATaGCCATCAAATACATCTTCA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYVDPSK*PSNTSS
Trigger: TGAAGATGTATTTGATGGTCATTTGCTGGGATCCAC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCTGGCATCCAATATTaGTTCAGGTCACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSGIQY*FRSLSW
Trigger: CCAGGACAGTGACCTGAAGCAATATTGGATGCCAGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTTTTCTACAGTAGGTaGATGCTCGGAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFFFYSR*MLGGLL
Trigger: CAGGAGACCTCCGAGCATGCACCTACTGTAGAAAAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYTSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGATGTCATCATCCTGGTaGTTGACATCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRMSSSW*LTSGRT
Trigger: AGTCCGACCTGATGTCAAGCACCAGGATGATGACAT...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATATCCGTTTTCAAGGATaGAAGTCTCTCATCAACAGC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYIRFQG*KSLINS
Trigger: GCTGTTGATGAGAGACTTGCATCCTTGAAAACGGAT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGACATGAGCCTTGCTTaGATCTTCTCTGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFDMSLA*IFSVQF
Trigger: GAACTGGACAGAGAAGATGCAAGCAAGGCTCATGTC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGGAAGACATGAGCCTTaGTTGCATCTTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFGRHEP*LHLLCP
Trigger: TGGACAGAGAAGATGCAAGCAAGGCTCATGTCTTCC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTACCTCACAGAGGCTTTaGTTCTTGGCAATCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFTSQRL*FLAISD
Trigger: GTCACTGATTGCCAAGAAGCAAAGCCTCTGTGAGGT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCCCTACAATGCAGTTaGGATGTGTTCTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSLQCS*DVFSTS
Trigger: ACTGGTTGAGAACACATCCCAACTGCATTGTAGGGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTTTCATCTGGCTTTTaGGATCCTGTTGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLSSGF*DPVAHP
Trigger: CGGATGAGCAACAGGATCCCAAAAGCCAGATGAAAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGATGTTCAGCAATCCTaGTGCTCACTAGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFDVQQS*CSLAHV
Trigger: CACATGAGCTAGTGAGCACCAGGATTGCTGAACATC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCATTCTACCCAAGGTCTaGCTGTCACCCAGATGTTCA +
Preference number: 4 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLILPKV*LSPRCS
Trigger: TGAACATCTGGGTGACAGCCAGACCTTGGGTAGAAT...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGTCTCACAGACAGCAATaGGCACCCGTTCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRSHRQQ*APVHVH
Trigger: ATGAACATGAACGGGTGCCCATTGCTGTCTGTGAGA...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCCGCAGAGTTGCTTTaGACAATTCCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSAELL*TIPLRH
Trigger: ATGCCTTAGAGGAATTGTCCAAAGCAACTCTGCGGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTGGAGAGACCACAGTTaGCATTTTACCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFWRDHS*HFTLSS
Trigger: GGAGGACAAGGTAAAATGCCAACTGTGGTCTCTCCA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFEGFLI*KFTLSS
Trigger: GCTGGACAACGTGAACTTCCATATCAAGAAGCCCTC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGACAGATGTCTCATATaGAGGAACCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFDRCLI*RNHRRT
Trigger: GGTTCTCCTATGGTTCCTTCATATGAGACATCTGTC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCTTGGGTCATTCGACTaGTTCTTTCTAAAACTTGTG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYLGSFD*FFLKLV
Trigger: CACAAGTTTTAGAAAGAATCAGTCGAATGACCCAAG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATGGAGAGGCAACAATaGCTCTGGTACCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFMERQQ*LWYQCK
Trigger: TTTGCATTGGTACCAGAGTCATTGTTGCCTCTCCAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCCTTCACCTCTTTGTTaGGAAGAGGAGACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFPSPLC*EEETSK
Trigger: TTTACTGGTCTCCTCTTCTCAACAAAGAGGTGAAGG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATACCTTCAGTGGGGCTTaGCGCTTAATGAATATTTTT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYTFSGA*RLMNIF
Trigger: AAAAATATTCATTAAGCGTCAAGCCCCACTGAAGGT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCACCTGTGAAACCTTCTaGAAAAAGTCTTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFTCETF*KKSLRS
Trigger: GGACCTCAAAGACTTTTTTCAGAAGGTTTCACAGGT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTTCTTGGCAATCAGTaGCTCAAAAATGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLLGNQ*LKNGLQ
Trigger: CTGCAGTCCATTTTTGAGTCACTGATTGCCAAGAAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGTGGATCCCAGCAAATaGCCATCAAATACATCTTCA +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFVDPSK*PSNTSS
Trigger: TGAAGATGTATTTGATGGTCATTTGCTGGGATCCAC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGCATTTGCTTCAGAATaGATCTATCATCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFAFASE*IYHLRW
Trigger: CCACCGAAGATGATAGATTCATTCTGAAGCAAATGC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTTCGAATGTAATCTATaGTGCCAACCACAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYFECNL*CQPQAH
Trigger: ATGAGCTTGTGGTTGGCATCATAGATTACATTCGAA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFTWRAS*YGSSRC
Trigger: ACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTGTCCAGAAGAATTTTaGGTTCATCCTCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFCPEEF*VHPQSS
Trigger: AGACGACTGAGGATGAACGCAAAATTCTTCTGGACA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKTSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCACTTATTGAGAGCTaGTGTCCTCCAGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSLIES*CPPVSE
Trigger: TTCTGACACTGGAGGACAGCAGCTCTCAATAAGTGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTGGAATGAAGGGCTTTaGATTAATGTTGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYWNEGL*INVGGI
Trigger: TATGCCTCCAACATTAATGCAAAGCCCTTCATTCCA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTTGATTCCAACAAAGTaGTATCCTCAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFLIPTK*YPQKTG
Trigger: CCCTGTCTTCTGAGGATAGCACTTTGTTGGAATCAA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTTCAGGTCACTGTCCTaGCTTTTTCCTTCCATGATT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFFRSLS*LFPSMI
Trigger: AATCATGGAAGGAAAAAGCCAGGACAGTGACCTGAA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTGTCCGAGGTTCGCTTaGATCAAGTATAGACACAGA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFCPRFA*IKYRHR
Trigger: TCTGTGTCTATACTTGATCCAAGCGAACCTCGGACA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAGAATATGTTACGACTaGCTTTTCTACTCCCAACTG +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYRICYD*LFYSQL
Trigger: CAGTTGGGAGTAGAAAAGCCAGTCGTAACATATTCT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCAACAAGAACCAATGTaGGTCGAACATCAACTATTC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYQQEPM*VEHQLF
Trigger: GAATAGTTGATGTTCGACCCACATTGGTTCTTGTTG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTACAGTCCACCTTTGTTaGCCATATTACATCACTTGG +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSTVHLC*PYYITW
Trigger: CCAAGTGATGTAATATGGCCAACAAAGGTGGACTGT...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCACAGTCCACCTTTGTTaGCCATATTACATCACTTGG +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFTVHLC*PYYITW
Trigger: CCAAGTGATGTAATATGGCCAACAAAGGTGGACTGT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTGATATCCAGGCACTaGAGAATCCAACTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLISRH*RIQLLQ
Trigger: CTGAAGGAGTTGGATTCTCCAGTGCCTGGATATCAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAGAGGCTTTGCTTCTTaGCAATCAGTGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYRGFAS*QSVTQK
Trigger: TTTTTGAGTCACTGATTGCCAAGAAGCAAAGCCTCT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTCCATTGTGAAGTCCTaGAGAAATATTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYSIVKS*RNIPWR
Trigger: TCTCCAAGGAATATTTCTCCAGGACTTCACAATGGA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGAGTCCTATACAACTCTaGAGAGACCACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRSPIQL*RDHSWH
Trigger: ATGCCAACTGTGGTCTCTCCAGAGTTGTATAGGACT...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAGTCCTATACAACTCTaGAGAGACCACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSPIQL*RDHSWH
Trigger: ATGCCAACTGTGGTCTCTCCAGAGTTGTATAGGACT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGTTCTGCTTTCCTTCTaGAGTCTAACACTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFVLLSF*SLTLKS
Trigger: GCTCTTCAGTGTTAGACTCCAGAAGGAAAGCAGAAC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
3UTR CAA 72 bp TTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTaGAGTTCAACTTTCTCTCACTTTGTTAATTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSVSLKPVWSTE*SSTFSHFVNFL
Trigger: GAGGAAATTAACAAAGTGAGAGAAAGTTGAACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
3UTR CAA 72 bp TTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATaGACAACCACAGAGTCAAATTTCTTTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: FLCAMFLVQTKP*TTTESNFFPPG
Trigger: CCCAGGTGGAAAGAAATTTGACTCTGTGGTTGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTTGATATGGACAAACTaGCGGATATCCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFLIWTN*RISMSS
Trigger: TGATGACATGGATATCCGTCAGTTTGTCCATATCAA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAAAAGAATTCCCTTTCCTaGAGCACAATAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKKNSLS*STIGSM
Trigger: CATTGATCCTATTGTGCTTCAGGAAAGGGAATTCTT...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCCAAATGTTTTGACTaGATTCTTCCTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSKCFD*ILPPLA
Trigger: AGCTAGAGGAGGAAGAATTCAGTCAAAACATTTGGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAGACCAGGATTCATTTaGAAGAGCAACAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFRPGFI*KSNNWC
Trigger: ACACCAGTTGTTGCTCTTTCAAATGAATCCTGGTCT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTCCACATGAGGATTTGTaGGTTGTTTCTTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSPHEDL*VVSSVY
Trigger: ATACACAGAAGAAACAACTCACAAATCCTCATGTGG...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCCACATGAGGATTTGTaGGTTGTTTCTTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFPHEDL*VVSSVY
Trigger: ATACACAGAAGAAACAACTCACAAATCCTCATGTGG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR TCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAATTCGAATGTAATCTATaGTGCCAACCACAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKFECNL*CQPQAH
Trigger: ATGAGCTTGTGGTTGGCATCATAGATTACATTCGAA...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGATTACAACAACGACTaGAGAAAATCTGCCCACACA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFDYNND*RKSAHT
Trigger: TGTGTGGGCAGATTTTCTGCAGTCGTTGTTGTAATC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCTGTCCAGAAGAATTTTaGGTTCATCCTCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLCPEEF*VHPQSS
Trigger: AGACGACTGAGGATGAACGCAAAATTCTTCTGGACA...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCTTGATTCCAACAAAGTaGTATCCTCAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLLIPTK*YPQKTG
Trigger: CCCTGTCTTCTGAGGATAGCACTTTGTTGGAATCAA...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGGTGTTACTTGTTTaGAGATTCTGCACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLVLLV*RFCTRN
Trigger: ATTCCTGGTGCAGAATCTGCAAACAAGTAACACCAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAGAGTAACTGAAAGATaGCACCATCTGGTTATAAGA +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYRVTER*HHLVIR
Trigger: TCTTATAACCAGATGGTGGCATCTTTCAGTTACTCT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCATCCGTTTTCAAGGATaGAAGTCTCTCATCAACAGC +
Preference number: 4 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLIRFQG*KSLINS
Trigger: GCTGTTGATGAGAGACTTGCATCCTTGAAAACGGAT...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAAATTTCTTTCCACCTaGGATCTTCTTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYKFLST*DLLDMD
Trigger: GTCCATATCAAGAAGATCCCAGGTGGAAAGAAATTT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCACCACTAAATCACCTTaGGTCATTCGACTGATTCTT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFTTKSP*VIRLIL
Trigger: AAGAATCAGTCGAATGACCCAAGGTGATTTAGTGGT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGATGCATCTTTTGAATaGACAAAGGGGTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFDASFE*TKGSKC
Trigger: ACATTTGGACCCCTTTGTCCATTCAAAAGATGCATC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAACCATATTACATCACTTaGAATCAATCCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKPYYIT*NQSPLF
Trigger: GAAGAGAGGGGATTGATTCCAAGTGATGTAATATGG...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTTCCATTGTGAAGTCCTaGAGAAATATTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSSIVKS*RNIPWR
Trigger: TCTCCAAGGAATATTTCTCCAGGACTTCACAATGGA...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR TCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAAGAATTCCCTTTCCTaGAGCACAATAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFKNSLS*STIGSM
Trigger: CATTGATCCTATTGTGCTTCAGGAAAGGGAATTCTT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTGGAGATGTGTCCATTaGATTTATCTTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFWRCVH*IYLAFF
Trigger: GAAGAAAGCAAGATAAATGCAATGGACACATCTCCA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTTCTTTACAACTGAGTaGAAAAGCAATGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFFFTTE*KSNDGA
Trigger: AGCTCCATCATTGCTTTTGCACTCAGTTGTAAAGAA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTTCCAAACGAGGCATTTaGTTCAGAATGAATCTATCA +
Preference number: 4 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSSKRGI*FRMNLS
Trigger: TGATAGATTCATTCTGAAGCAAATGCCTCGTTTGGA...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATTGAAGTAGTGTGGTaGAAAGTCAAGGAAAGACTG +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFIEVVW*KVKERL
Trigger: CAGTCTTTCCTTGACTTTGCACCACACTACTTCAAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCAAATCAAAAACCTGTaGCATCTTTCTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFQIKNL*HLSPIE
Trigger: TTCTATGGGAGAAAGATGGCACAGGTTTTTGATTTG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCACCACTAAATCACCTTaGGTCATTCGACTGATTCTT +
Preference number: 4 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLTTKSP*VIRLIL
Trigger: AAGAATCAGTCGAATGACCCAAGGTGATTTAGTGGT...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCCATATTACATCACTTaGAATCAATCCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFPYYIT*NQSPLF
Trigger: GAAGAGAGGGGATTGATTCCAAGTGATGTAATATGG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCAAAGATGGCTTTCATaGTTGACTTTTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFQRWLS*LTFPSP
Trigger: AGGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATATTGTAGCTGTTTCCTaGAAGCAAATTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYIVAVS*KQISKD
Trigger: ATCTTTGCTAATTTGCTTCCAGGAAACAGCTACAAT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTGGATCAAAAGGAAATaGAATGGGATTGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFWIKRK*NGIVAV
Trigger: AACAGCTACAATCCCATTCCATTTCCTTTTGATCCA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCAGAGTAACTGAAAGATaGCACCATCTGGTTATAAGA +
Preference number: 4 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLRVTER*HHLVIR
Trigger: TCTTATAACCAGATGGTGGCATCTTTCAGTTACTCT...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCCAAACGAGGCATTTaGTTCAGAATGAATCTATCA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSKRGI*FRMNLS
Trigger: TGATAGATTCATTCTGAAGCAAATGCCTCGTTTGGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTACGGAATGTAATAACTaGAGAGATACAGAGGATTAC +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFTECNN*RDTEDY
Trigger: GTAATCCTCTGTATCTCTCCAGTTATTACATTCCGT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGTGGAGAAATATTCCTTaGAGATGTGTCCATTGCATT +
Preference number: 4 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRWRNIP*RCVHCI
Trigger: AATGCAATGGACACATCTCCAAGGAATATTTCTCCA...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTGGAGAAATATTCCTTaGAGATGTGTCCATTGCATT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFWRNIP*RCVHCI
Trigger: AATGCAATGGACACATCTCCAAGGAATATTTCTCCA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCATTGTAGCTGTTTCCTaGAAGCAAATTAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFIVAVS*KQISKD
Trigger: ATCTTTGCTAATTTGCTTCCAGGAAACAGCTACAAT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCAGCACAGATTTaGAATGGGAACGAATATAGA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFFSAQI*NGNEYR
Trigger: TCTATATTCGTTCCCATTCCAAATCTGTGCTGAGAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCATCTCCTTTTGTaGAAAGATATCTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFFHLLL*KDIFHL
Trigger: AAGATGGAAGATATCTTTGCACAAAAGGAGATGGAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR GCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGAAATACTTGTCCATTaGTTCACAAAATCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFEILVH*FTKSSP
Trigger: AGGACTAGATTTTGTGAAGCAATGGACAAGTATTTC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CCA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATAATTGAAGTAGTGTaGTGCAAAGTCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFIIEVV*CKVKER
Trigger: TCTTTCCTTGACTTTGCACCACACTACTTCAATTAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 90 bp CAACCCCTCCTTGCCGGCCTGCCCAACCTGGTAGTAAGCACTGTCTaGCCCTCGCAAGGTCTCCCTCTTCTGGGAAGACAGATCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QPLLAGLPNLVVSTV*PSQGLPLLGRQIRA
Trigger: AGCCCTGATCTGTCTTCCCAGAAGAGGGAGACCTTGCGAGGGGCAGACAGTGCTTACTACCAGGTTGGGCAGGCCGGCAAGGAGGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 90 bp CTACTTCATCTTGAGGCTCCAGGCCTTGACTCTCCAACCCCTCCTTaGCGGCCTGCCCAACCTGGTAGTAAGCACTGTCTGCCCCTCGCA +
Preference number: 5 (lower is better)
Translates to: LLHLEAPGLDSPTPP*RPAQPGSKHCLPLA
Trigger: TGCGAGGGGCAGACAGTGCTTACTACCAGGTTGGGCAGGCCGGCAAGGAGGGGTTGGAGAGTCAAGGCCTGGAGCCTCAAGATGAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 90 bp CTCCCAGGACTGGGAGGAACTGAAGGCCTCTTTCTACCTTTTTCCTaGTGGAAGAGGTCCTGCAACCTGCTGTTCCACGCCTGGAGCACC +
Preference number: 5 (lower is better)
Translates to: LPGLGGTEGLFLPFS*WKRSCNLLFHAWST
Trigger: GGTGCTCCAGGCGTGGAACAGCAGGTTGCAGGACCTCTTCCAGCAGGAAAAAGGTAGAAAGAGGCCTTCAGTTCCTCCCAGTCCTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 90 bp GTACAGGCGACCTCACAGACTGTGTTCTTGAAGGGATCTGAGGGCTaGCCCAACTTGAACTCGGAGACTGCTGCTCTCCTTGGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: VQATSQTVFLKGSEG*PNLNSETAALLGPL
Trigger: AAGGGGGCCAAGGAGAGCAGCAGTCTCCGAGTTCAAGTTGGGCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTGAGGTCGCCTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS TCA 90 bp TGCCTCCCCGGGCCTGCCAGGGAGATGAGTGAGAAAGGGAACGGATaGATTCCTCCTCACTGCTGCCCAGAATCACTTCACGCATCTTGT +
Preference number: 5 (lower is better)
Translates to: CLPGPAREMSEKGNG*IPPHCCPESLHASC
Trigger: ACAAGATGCGTGAAGTGATTCTGGGCAGCAGTGAGGAGGAATTCATCCGTTCCCTTTCTCACTCATCTCCCTGGCAGGCCCGGGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 90 bp CCAGGACTGGGAGGAACTGAAGGCCTCTTTCTACCTTTTTCCTGCTaGAAGAGGTCCTGCAACCTGCTGTTCCACGCCTGGAGCACCTCA +
Preference number: 5 (lower is better)
Translates to: PGLGGTEGLFLPFSC*KRSCNLLFHAWSTS
Trigger: TGAGGTGCTCCAGGCGTGGAACAGCAGGTTGCAGGACCTCTTCCAGCAGGAAAAAGGTAGAAAGAGGCCTTCAGTTCCTCCCAGTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCACCGCAGGGCTCAGCGTaGGCTCTGCGTGTGTACTGG +
Preference number: 5 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSPQGSA*ALRVYW
Trigger: CCAGTACACACGCAGAGCCAACGCTGAGCCCTGCGG...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTCTCTCCAACCCCTCCTaGCCGGCCTGCCCAACCTGG +
Preference number: 5 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSLSNPS*PACPTW
Trigger: CCAGGTTGGGCAGGCCGGCAAGGAGGGGTTGGAGAG...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS TCA 90 bp CCTCCACAGGCTGGTTCTGCTTTCCTTCTGGAGTCTGTGCTCTCCTaGGGATGTGGCAAAGTGTTCTCTAACACTGAAGAGCGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: PPQAGSAFLLESVLS*GCGKVFSNTEERRW
Trigger: CCACCGGCGCTCTTCAGTGTTAGAGAACACTTTGCCACATCCTCAGGAGAGCACAGACTCCAGAAGGAAAGCAGAACCAGCCTGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS GCA 90 bp GGAACTGAAGGCCTCTTTCTACCTTTTTCCTGCTGGAAGAGGTCCTaGAACCTGCTGTTCCACGCCTGGAGCACCTCACAGAGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: GTEGLFLPFSCWKRS*NLLFHAWSTSQRLC
Trigger: GCAAAGCCTCTGTGAGGTGCTCCAGGCGTGGAACAGCAGGTTGCAGGACCTCTTCCAGCAGGAAAAAGGTAGAAAGAGGCCTTCAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGAGCCTCCTCTGAGCTaGATTGTGCAGCCTAGATGC +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKEPPLS*IVQPRC
Trigger: GCATCTAGGCTGCACAATCAAGCTCAGAGGAGGCTC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS GCA 90 bp AAGGCCTCTTTCTACCTTTTTCCTGCTGGAAGAGGTCCTGCAACCTaGTGTTCCACGCCTGGAGCACCTCACAGAGGCTTTGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: KASFYLFPAGRGPAT*CSTPGAPHRGFASW
Trigger: CCAAGAAGCAAAGCCTCTGTGAGGTGCTCCAGGCGTGGAACAGCAGGTTGCAGGACCTCTTCCAGCAGGAAAAAGGTAGAAAGAGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 90 bp CTGTGGATCCCAGCAAATGACCATCAAATACATCTTCAGAGCCACTaGCTGAATCCAGATCAGTCGGCCCTCCCACTACCTGCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: LWIPANDHQIHLQSH*LNPDQSALPLPARP
Trigger: TGGCCGAGCAGGTAGTGGGAGGGCCGACTGATCTGGATTCAGCCAGTGGCTCTGAAGATGTATTTGATGGTCATTTGCTGGGATCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGTCACAGACTGTGTTCTaGAAGGGATCTGAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKSQTVF*KGSEGW
Trigger: CCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTGA...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGCCAACCACAAGCTCATaGCTAGTGTCATCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKPTTSS*LVSSRP
Trigger: TGGGCGAGATGACACTAGCAATGAGCTTGTGGTTGG...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS TCA 90 bp CCACGCCTGGAGCACCTCACAGAGGCTTTGCTTCTTGGCAATCAGTaGCTCAAAAATGGACTGCAGTTGCTGAGGGGTATCCACAGAGGA +
Preference number: 5 (lower is better)
Translates to: PRLEHLTEALLLGNQ*LKNGLQLLRGIHRG
Trigger: TCCTCTGTGGATACCCCTCAGCAACTGCAGTCCATTTTTGAGTCACTGATTGCCAAGAAGCAAAGCCTCTGTGAGGTGCTCCAGGCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 90 bp GCGTTTCAATACTGTGCTGAGGCTTCGAAGCTGAACAGCTGTACGTaGGTCATGACCTCCACAGGCTGGTTCTGCTTTCCTTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: AFQYCAEASKLNSCT*VMTSTGWFCFPSGV
Trigger: GACTCCAGAAGGAAAGCAGAACCAGCCTGTGGAGGTCATGACCCACGTACAGCTGTTCAGCTTCGAAGCCTCAGCACAGTATTGAAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS CCA 90 bp TTGCTGGACTGGGCAGAAGAGCTGCTGAAGAGCACACAGAGCCTCTaGTGGTTAGCAGGGTTCAGACAGTCCACCTTTGTTGGCCATATT +
Preference number: 5 (lower is better)
Translates to: LLDWAEELLKSTQSL*WLAGFRQSTFVGHI
Trigger: AATATGGCCAACAAAGGTGGACTGTCTGAACCCTGCTAACCACCAGAGGCTCTGTGTGCTCTTCAGCAGCTCTTCTGCCCAGTCCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGTATCTGTACACAGCCTaGGCCATGAACAAAGCGTCG +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKYLYTA*AMNKAS
Trigger: CGACGCTTTGTTCATGGCCAAGGCTGTGTACAGATA...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGGGCGGTGGGCCTCTTTaGTTGAACAGCATTTGTGAT +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKGGGPL*LNSICD
Trigger: ATCACAAATGCTGTTCAACAAAAGAGGCCCACCGCC...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS GCA 90 bp GGTCATGACCTCCACAGGCTGGTTCTGCTTTCCTTCTGGAGTCTGTaGTCTCCTGAGGATGTGGCAAAGTGTTCTCTAACACTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GHDLHRLVLLSFWSL*SPEDVAKCSLTLKS
Trigger: GCTCTTCAGTGTTAGAGAACACTTTGCCACATCCTCAGGAGAGCACAGACTCCAGAAGGAAAGCAGAACCAGCCTGTGGAGGTCATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS CCA 90 bp ACCTGCTGTTCCACGCCTGGAGCACCTCACAGAGGCTTTGCTTCTTaGCAATCAGTGACTCAAAAATGGACTGCAGTTGCTGAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: TCCSTPGAPHRGFAS*QSVTQKWTAVAEGY
Trigger: ATACCCCTCAGCAACTGCAGTCCATTTTTGAGTCACTGATTGCCAAGAAGCAAAGCCTCTGTGAGGTGCTCCAGGCGTGGAACAGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTCGTC +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKLSRRI*RSSSVV
Trigger: GACGACTGAGGATGAACGCAAAATTCTTCTGGACAG...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGAGATGGCTTTCATGGTaGACTTTTCCTTCACCTGGC +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKRWLSW*TFPSPG
Trigger: GCCAGGTGAAGGAAAAGTCAACCATGAAAGCCATCT...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS TCA 90 bp CTTGCTTTCTTCACCTTGTCTCAGTCTCCCAGGACTGGGAGGAACTaGAGGCCTCTTTCTACCTTTTTCCTGCTGGAAGAGGTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LAFFTLSQSPRTGRN*RPLSTFFLLEEVLQ
Trigger: TTGCAGGACCTCTTCCAGCAGGAAAAAGGTAGAAAGAGGCCTTCAGTTCCTCCCAGTCCTGGGAGACTGAGACAAGGTGAAGAAAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AACTCTGCCGGACGCTTTCCACTCGGCCTCAGGTGGGCATCTGTCTGTATGGAGTACCTTCAGTGGGGCTaGACGCTTAATGAATATTTT +
Preference number: 5 (lower is better)
Translates to: NSAGRFPLGLRWASVCMEYLQWG*TLNEYF
Trigger: AAAATATTCATTAAGCGTCAAGCCCCACTGAAGGTA...CTCCATACAGACAGATGCCCACCTGAGGCCGAGTGGAAAGCGTCCGGCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACTCATCATCCTGGTGCTaGACATCAGGTCGGACTGTC +
Preference number: 5 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHSSSWC*TSGRTV
Trigger: GACAGTCCGACCTGATGTCAAGCACCAGGATGATGA...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCTCTCCAACCCCTCCTaGCCGGCCTGCCCAACCTGG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFLSNPS*PACPTW
Trigger: CCAGGTTGGGCAGGCCGGCAAGGAGGGGTTGGAGAG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAAAGCAGCTCCTGACTaGCCTCCCCGGGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYKAAPD*PPRACQ
Trigger: CTGGCAGGCCCGGGGAGGCAAGTCAGGAGCTGCTTT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGTTTTCCAGGGATTTCTaGATTACAACAACGACTGCA +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKFSRDF*ITTTTA
Trigger: TGCAGTCGTTGTTGTAATCAAGAAATCCCTGGAAAA...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCTCCTACGGCATCCTGTaGATCCATATGGAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSSYGIL*IHMERQ
Trigger: TTGCCTCTCCATATGGATCAACAGGATGCCGTAGGA...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCCGCAGGGCTCAGCGTaGGCTCTGCGTGTGTACTGG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFPQGSA*ALRVYW
Trigger: CCAGTACACACGCAGAGCCAACGCTGAGCCCTGCGG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS TCA 90 bp CTTTGCTTCTTGGCAATCAGTGACTCAAAAATGGACTGCAGTTGCTaGGGGGTATCCACAGAGGAAGACATGAGCCTTGCTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LCFLAISDSKMDCSC*GVSTEEDMSLACIF
Trigger: GAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTGGATACCCCTCAGCAACTGCAGTCCATTTTTGAGTCACTGATTGCCAAGAAGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTCTTCCCAGCATCCTCTaGAACAGATACGAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSLPSIL*NRYESC
Trigger: ACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAAG...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACTTCCCTACAATGCAGTaGGGATGTGTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACACATCCCAACTGCATTGTAGGGAA...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CTAAGGGAAAGTGGGCCTCGTGGCCTAGAGACCACAACCATGAGTACCACCAAGTTATGTGCAATGTTCTaGGTACAAACAAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: LRESGPRGLETTTMSTTKLCAMF*VQTKPL
Trigger: CAATGGCTTTGTTTGTACCAAGAACATTGCACATAA...CTTGGTGGTACTCATGGTTGTGGTCTCTAGGCCACGAGGCCCACTTTCCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACGGCATAAGTCTTTCGTaGATCTTCAGAGGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHGISLS*IFRGGD
Trigger: GTCACCTCCTCTGAAGATCAACGAAAGACTTATGCC...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTAGACATGAGCCTTGCTaGCATCTTCTCTGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSRHEPC*HLLCPV
Trigger: AACTGGACAGAGAAGATGCAAGCAAGGCTCATGTCT...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp TGCTCTCCTTGGCCCCCTTCTCCTCGCTCTGCAACCGAAGCTCTCAAAAGACTAAATGGACCCTGGTCTTaGTTAAAACGAAAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: CSPWPPSPRSATEALKRLNGPWS*LKRKRF
Trigger: AAACCTTTTTCGTTTTAACAAAGACCAGGGTCCATT...TAGTCTTTTGAGAGCTTCGGTTGCAGAGCGAGGAGAAGGGGGCCAAGGAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000185263.7
CDS TCA 90 bp ATGGTTGACTTTTCCTTCACCTGGCTGTCTGTGGATCCCAGCAAATaGCCATCAAATACATCTTCAGAGCCACTGGCTGAATCCAGATCA +
Preference number: 5 (lower is better)
Translates to: MVDFSFTWLSVDPSK*PSNTSSEPLAESRS
Trigger: TGATCTGGATTCAGCCAGTGGCTCTGAAGATGTATTTGATGGTCATTTGCTGGGATCCACAGACAGCCAGGTGAAGGAAAAGTCAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS TCA 90 bp GTAGCTGTTTCCTGGAAGCAAATTAGCAAAGATGGCTTTCATGGTTaGCTTTTCCTTCACCTGGCTGTCTGTGGATCCCAGCAAATGACC +
Preference number: 5 (lower is better)
Translates to: VAVSWKQISKDGFHG*LFLHLAVCGSQQMT
Trigger: GGTCATTTGCTGGGATCCACAGACAGCCAGGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTGCTAATTTGCTTCCAGGAAACAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 90 bp CAAAGATGGCTTTCATGGTTGACTTTTCCTTCACCTGGCTGTCTGTaGATCCCAGCAAATGACCATCAAATACATCTTCAGAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: QRWLSWLTFPSPGCL*IPANDHQIHLQSHW
Trigger: CCAGTGGCTCTGAAGATGTATTTGATGGTCATTTGCTGGGATCCACAGACAGCCAGGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 90 bp AAAGGAAATGGGCGTCGCTGTGGATGGAGGTTCTCAGCACAGATTTaGAATGGGAACGAATATAGAGAGGGTTGTCTCGAACCATCTTTA +
Preference number: 5 (lower is better)
Translates to: KGNGRRCGWRFSAQI*NGNEYREGCLEPSL
Trigger: TAAAGATGGTTCGAGACAACCCTCTCTATATTCGTTCCCATTCCAAATCTGTGCTGAGAACCTCCATCCACAGCGACGCCCATTTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGAGACTGCTGCTCTCCTaGGCCCCCTTCTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRRLLLS*APFSSL
Trigger: GAGCGAGGAGAAGGGGGCCAAGGAGAGCAGCAGTCT...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAGACTGCTGCTCTCCTaGGCCCCCTTCTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFRLLLS*APFSSL
Trigger: GAGCGAGGAGAAGGGGGCCAAGGAGAGCAGCAGTCT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CAGGAATTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACAAGACTGCTGCTCTCCTaGGCCCCCTTCTCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: QEFIFLCAMFLVQTKPLTRLLLS*APFSSL
Trigger: GAGCGAGGAGAAGGGGGCCAAGGAGAGCAGCAGTCT...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAATTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR CAA 90 bp CATCCAAGCACAGTGGGCCTTGATGAACAGAGACAGTCTATGGTTTTAGAGCTTTCCAATTGCTATAGCTaGTGCCCTTGTAGCGATGTG +
Preference number: 5 (lower is better)
Translates to: HPSTVGLDEQRQSMVLELSNCYS*CPCSDV
Trigger: CACATCGCTACAAGGGCACAAGCTATAGCAATTGGA...AAGCTCTAAAACCATAGACTGTCTCTGTTCATCAAGGCCCACTGTGCTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCATCCATCAACCATTGCTaGTCCAATTGCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSSINHC*SNCYSL
Trigger: CAAGCTATAGCAATTGGACAAGCAATGGTTGATGGA...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTATTTCCTTCACCTCTTaGTTGAGAAGAGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSISFTS*LRRGDQ
Trigger: CTGGTCTCCTCTTCTCAACAAAGAGGTGAAGGAAAT...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAGGTGGGCCTCTTTTGTaGAACAGCATTTGTGATATA +
Preference number: 5 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSGGPLL*NSICDI
Trigger: TATATCACAAATGCTGTTCAACAAAAGAGGCCCACC...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS GCA 90 bp CAACCCTGTCCAGTGGTCTGGCACCATCAAGAAATACTTGTCCATTaGTTCACAAAATCTAGTCCTATACAACTCTGGAGAGACCACAGT +
Preference number: 5 (lower is better)
Translates to: QPCPVVWHHQEILVH*FTKSSPIQLWRDHS
Trigger: ACTGTGGTCTCTCCAGAGTTGTATAGGACTAGATTTTGTGAAGCAATGGACAAGTATTTCTTGATGGTGCCAGACCACTGGACAGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCCCTTCCATGATTTCTTaGAGGCGTTTCAATACTGTG +
Preference number: 5 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSPSMIS*RRFNTV
Trigger: CACAGTATTGAAACGCCTCAAAGAAATCATGGAAGG...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCATTTCTGATTAGCCAGTaGACTAATTCCTTCCCTACA +
Preference number: 5 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSFLISQ*TNSFPT
Trigger: TGTAGGGAAGGAATTAGTCAACTGGCTAATCAGAAA...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCTACAAGAGCAAAGGTGCCCATCTTTAAGTCTGTAACTTCCCTACTTCCCCACGTAAAAGGCAGCTCTTaGGATTTTTCCTCTACTCGT +
Preference number: 5 (lower is better)
Translates to: PTRAKVPIFKSVTSLLPHVKGSS*DFSSTR
Trigger: ACGAGTAGAGGAAAAATCCAAAGAGCTGCCTTTTAC...GTGGGGAAGTAGGGAAGTTACAGACTTAAAGATGGGCACCTTTGCTCTTGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGAGCCTCCTCTGAGCTaGATTGTGCAGCCTAGATGC +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYEPPLS*IVQPRC
Trigger: GCATCTAGGCTGCACAATCAAGCTCAGAGGAGGCTC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp GTCACCTCAAGCCAATGCTCAAGAGTGACCCCATACATACATAGAGGTCAAAGCTCATCACTCTCAGTTTaGTTTCCTGATTTGCCACCT +
Preference number: 5 (lower is better)
Translates to: VTSSQCSRVTPYIHRGQSSSLSV*FPDLPP
Trigger: AGGTGGCAAATCAGGAAACAAAACTGAGAGTGATGA...GCTTTGACCTCTATGTATGTATGGGGTCACTCTTGAGCATTGGCTTGAGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTCAAGCACTGGGAGCATaGCTGGACTGGGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSQALGA*LDWAEE
Trigger: CTCTTCTGCCCAGTCCAGCAATGCTCCCAGTGCTTG...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCAAGCACTGGGAGCATaGCTGGACTGGGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFQALGA*LDWAEE
Trigger: CTCTTCTGCCCAGTCCAGCAATGCTCCCAGTGCTTG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTAACAACTGGTGTTACTaGTTTGCAGATTCTGCACCA +
Preference number: 5 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSNNWCY*FADSAP
Trigger: TGGTGCAGAATCTGCAAACAAGTAACACCAGTTGTT...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CCCAGTACTCATAGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCACTCTTCCATCTCCTTTaGTGCAAAGATATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: PSTHRGRCFSVSLKPVWSLFHLL*CKDIFH
Trigger: ATGGAAGATATCTTTGCACAAAAGGAGATGGAAGAG...TGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCTATGAGTACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTTTGAGGCTCCAGGCCTaGACTCTCCAACCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSLRLQA*TLQPLL
Trigger: AAGGAGGGGTTGGAGAGTCAAGGCCTGGAGCCTCAA...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGCTGGAGAGACCACAGTaGGCATTTTACCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQLERPQ*AFYLVL
Trigger: GAGGACAAGGTAAAATGCCAACTGTGGTCTCTCCAG...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS CCA 90 bp TCTGCACCAGGAATATGTGAGAATTGTATGTTGATATCCAGGCACTaGAGAATCCAACTCCTTCAGAATTATCTGTACACAGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SAPGICENCMLISRH*RIQLLQNYLYTALA
Trigger: GGCCAAGGCTGTGTACAGATAATTCTGAAGGAGTTGGATTCTCCAGTGCCTGGATATCAACATACAATTCTCACATATTCCTGGTGCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTGAGGCTCCAGGCCTaGACTCTCCAACCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLRLQA*TLQPLL
Trigger: AAGGAGGGGTTGGAGAGTCAAGGCCTGGAGCCTCAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCTGACTGAGGTGCGCTaGCTAGGACTGGCAGAATTA +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYLTEVR*LGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACCTCAGTCAG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCACAGACTGTGTTCTaGAAGGGATCTGAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSQTVF*KGSEGW
Trigger: CCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGGCGGTGGGCCTCTTTaGTTGAACAGCATTTGTGAT +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYGGGPL*LNSICD
Trigger: ATCACAAATGCTGTTCAACAAAAGAGGCCCACCGCC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGGGGAAGGTGCTTTTCTGTGAGTTTGAAGCCAGTCTGGTCAACAGAGTTGAGTACCATCTCAAGTTTTTaGTCCCATGTAAATGTTCGA +
Preference number: 5 (lower is better)
Translates to: RGRCFSVSLKPVWSTELSTISSF*SHVNVR
Trigger: TCGAACATTTACATGGGACAAAAAACTTGAGATGGT...ACTCAACTCTGTTGACCAGACTGGCTTCAAACTCACAGAAAAGCACCTTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGGCACATGTGGGTACTaGGAGGGCTTCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFGTCGY*EGFLIW
Trigger: CCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS CCA 90 bp CAGGGTTGTCAAGAAGCGATCCTCTTTTTCTCCATTGTGAAGTCCTaGAGAAATATTCCTTGGAGATGTGTCCATTGCATTTATCTTGCT +
Preference number: 5 (lower is better)
Translates to: QGCQEAILFFSIVKS*RNIPWRCVHCIYLA
Trigger: AGCAAGATAAATGCAATGGACACATCTCCAAGGAATATTTCTCCAGGACTTCACAATGGAGAAAAAGAGGATCGCTTCTTGACAACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCCAGTAACGGTGATCTaGAAATTCCATCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYPVTVI*KFHPTG
Trigger: ACCAGTGGGATGGAATTTCAAGATCACCGTTACTGG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTCCAATTGCTATAGCTaGTGCCCTTGTAGCGATGTG +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYSNCYS*CPCSDV
Trigger: CACATCGCTACAAGGGCACAAGCTATAGCAATTGGA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCATCATCCTGGTGCTaGACATCAGGTCGGACTGTC +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSSSWC*TSGRTV
Trigger: GACAGTCCGACCTGATGTCAAGCACCAGGATGATGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCCTACGGCATCCTGTaGATCCATATGGAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSYGIL*IHMERQ
Trigger: TTGCCTCTCCATATGGATCAACAGGATGCCGTAGGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCTCTGGCTGGACAGGGTaGTCAAGAAGCGATCCTCTT +
Preference number: 5 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLSGWTG*SRSDPL
Trigger: AAGAGGATCGCTTCTTGACAACCCTGTCCAGCCAGA...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCTGGCTGGACAGGGTaGTCAAGAAGCGATCCTCTT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSGWTG*SRSDPL
Trigger: AAGAGGATCGCTTCTTGACAACCCTGTCCAGCCAGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAGATGGCTTTCATGGTaGACTTTTCCTTCACCTGGC +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYRWLSW*TFPSPG
Trigger: GCCAGGTGAAGGAAAAGTCAACCATGAAAGCCATCT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCCAACCACAAGCTCATaGCTAGTGTCATCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFPTTSS*LVSSRP
Trigger: TGGGCGAGATGACACTAGCAATGAGCTTGTGGTTGG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCCAGTAACGGTGATCTaGAAATTCCATCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFPVTVI*KFHPTG
Trigger: ACCAGTGGGATGGAATTTCAAGATCACCGTTACTGG...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp TGTACCACGCAAAACAGTTCAATTATGTGTTTCCCCTTCATTAACACCAGCCAGGAAAATAATCTCGAGTaGAGCATCTCATCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: CTTQNSSIMCFPFINTSQENNLE*SISSPF
Trigger: AAAAGGGGATGAGATGCTCAACTCGAGATTATTTTC...CTGGCTGGTGTTAATGAAGGGGAAACACATAATTGAACTGTTTTGCGTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTATCTGTACACAGCCTaGGCCATGAACAAAGCGTCG +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFYLYTA*AMNKAS
Trigger: CGACGCTTTGTTCATGGCCAAGGCTGTGTACAGATA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCAAAAATGGACTGCAGTaGCTGAGGGGTATCCACAGA +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFKNGLQ*LRGIHR
Trigger: TCTGTGGATACCCCTCAGCAACTGCAGTCCATTTTT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTTCCGCAGAGTTGCTTaGGACAATTCCTCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFFRRVA*DNSSKA
Trigger: TGCCTTAGAGGAATTGTCCAAAGCAACTCTGCGGAA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTCACTGTTCCGCAGAGTaGCTTTGGACAATTCCTCTA +
Preference number: 5 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSHCSAE*LWTIPL
Trigger: TAGAGGAATTGTCCAAAGCAACTCTGCGGAACAGTG...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGGAGAGACCACAGTaGGCATTTTACCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLERPQ*AFYLVL
Trigger: GAGGACAAGGTAAAATGCCAACTGTGGTCTCTCCAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFIWKFT*SSSTFR
Trigger: CCTGAACGTGGAGCTGGACAACGTGAACTTCCATAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTTCCCAGCATCCTCTaGAACAGATACGAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLPSIL*NRYESC
Trigger: ACAAGACTCGTATCTGTTCAAGAGGATGCTGGGAAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTCGTC +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLSRRI*RSSSVV
Trigger: GACGACTGAGGATGAACGCAAAATTCTTCTGGACAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCCCTACAATGCAGTaGGGATGTGTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACACATCCCAACTGCATTGTAGGGAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTCCATCAACCATTGCTaGTCCAATTGCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYSINHC*SNCYSL
Trigger: CAAGCTATAGCAATTGGACAAGCAATGGTTGATGGA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGGCATAAGTCTTTCGTaGATCTTCAGAGGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFGISLS*IFRGGD
Trigger: GTCACCTCCTCTGAAGATCAACGAAAGACTTATGCC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTAGGGGTCCAAATGTTTaGACTGAATTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSRGPNV*TEFFLL
Trigger: GAGGAGGAAGAATTCAGTCAAAACATTTGGACCCCT...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCAGGGGTCCAAATGTTTaGACTGAATTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFRGPNV*TEFFLL
Trigger: GAGGAGGAAGAATTCAGTCAAAACATTTGGACCCCT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCAGACAGTCCACCTTaGTTGGCCATATTACATCAC +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSDSPP*LAILHH
Trigger: GTGATGTAATATGGCCAACAAAGGTGGACTGTCTGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATAACAACTGGTGTTACTaGTTTGCAGATTCTGCACCA +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYNNWCY*FADSAP
Trigger: TGGTGCAGAATCTGCAAACAAGTAACACCAGTTGTT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTAGACATGAGCCTTGCTaGCATCTTCTCTGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFRHEPC*HLLCPV
Trigger: AACTGGACAGAGAAGATGCAAGCAAGGCTCATGTCT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGAAAAATGGACTGCAGTaGCTGAGGGGTATCCACAGA +
Preference number: 5 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRKNGLQ*LRGIHR
Trigger: TCTGTGGATACCCCTCAGCAACTGCAGTCCATTTTT...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCACTGTTCCGCAGAGTaGCTTTGGACAATTCCTCTA +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFHCSAE*LWTIPL
Trigger: TAGAGGAATTGTCCAAAGCAACTCTGCGGAACAGTG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTACTTGGAGGGCTTCTaGATATGGAAGTTCACGTTG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFYLEGF*IWKFTL
Trigger: CAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATGAACAGATACGAGTCTaGTTGAAAGAGCACTATTTG +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYEQIRV*LKEHYL
Trigger: CAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTC...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTTTCTGATTAGCCAGTaGACTAATTCCTTCCCTACA +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYFLISQ*TNSFPT
Trigger: TGTAGGGAAGGAATTAGTCAACTGGCTAATCAGAAA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTATTTCCTTCACCTCTTaGTTGAGAAGAGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFISFTS*LRRGDQ
Trigger: CTGGTCTCCTCTTCTCAACAAAGAGGTGAAGGAAAT...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTCATCACTCTCAGTTTaGTTTCCTGATTTGCCACCT +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFSSLSV*FPDLPP
Trigger: AGGTGGCAAATCAGGAAACAAAACTGAGAGTGATGA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTCAGACAGTCCACCTTaGTTGGCCATATTACATCAC +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFSDSPP*LAILHH
Trigger: GTGATGTAATATGGCCAACAAAGGTGGACTGTCTGA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTACCTTCAGTGGGGCTaGACGCTTAATGAATATTTT +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYYLQWG*TLNEYF
Trigger: AAAATATTCATTAAGCGTCAAGCCCCACTGAAGGTA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAACTGGAGAAATATTCCTaGGAGATGTGTCCATTGCAT +
Preference number: 5 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKLEKYS*EMCPLH
Trigger: ATGCAATGGACACATCTCCAAGGAATATTTCTCCAG...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATATGAGGATTTGTGAGTaGTTTCTTCTGTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYMRICE*FLLCIS
Trigger: GGAGATACACAGAAGAAACAACTCACAAATCCTCAT...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCGGTGGGCCTCTTTTGTaGAACAGCATTTGTGATATA +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFGGPLL*NSICDI
Trigger: TATATCACAAATGCTGTTCAACAAAAGAGGCCCACC...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATCTCCTAAAATTCCTGTaGACTTCACAACCATCTCAA +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYLLKFL*TSQPSQ
Trigger: TTGAGATGGTTGTGAAGTCAACAGGAATTTTAGGAG...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCCTTCCATGATTTCTTaGAGGCGTTTCAATACTGTG +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFPSMIS*RRFNTV
Trigger: CACAGTATTGAAACGCCTCAAAGAAATCATGGAAGG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AATCTTGATGCTTCAAAGAGGCAACAGCTTGTGGAATACTTTTATTGTCTAGTTCCTTCCATGATTTCTTaGAGGCGTTTCAATACTGTG +
Preference number: 5 (lower is better)
Translates to: NLDASKRQQLVEYFYCLVPSMIS*RRFNTV
Trigger: CACAGTATTGAAACGCCTCAAAGAAATCATGGAAGG...AACTAGACAATAAAAGTATTCCACAAGCTGTTGCCTCTTTGAAGCATCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190058.7
CDS-3UTR CAA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTGAACAGATACGAGTCTaGTTGAAAGAGCACTATTTG +
Preference number: 5 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSEQIRV*LKEHYL
Trigger: CAAATAGTGCTCTTTCAACAAGACTCGTATCTGTTC...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGTAAAAGGCAGCTCTTaGGATTTTTCCTCTACTCGT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFVKGSS*DFSSTR
Trigger: ACGAGTAGAGGAAAAATCCAAAGAGCTGCCTTTTAC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AGCCAATCTATAGACAGTCACAGAACTGAAAGGTCTTTGTGTTCAGTGGTATATTGTGGAATACTTTTATaGTCTAGTTCACCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SQSIDSHRTERSLCSVVYCGILL*SSSPFS
Trigger: AGAGAAGGGTGAACTAGACAATAAAAGTATTCCACA...ATATACCACTGAACACAAAGACCTTTCAGTTCTGTGACTGTCTATAGATTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTGGAGAAATATTCCTaGGAGATGTGTCCATTGCAT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLEKYS*EMCPLH
Trigger: ATGCAATGGACACATCTCCAAGGAATATTTCTCCAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CAAGACTGTAGAGCTGATTTATTATATCTCGTCTTCAAATGCTGGAAGCCTAAAAATTCCTCTAAGGCATaGCGGTATTCTTTACAACTG +
Preference number: 5 (lower is better)
Translates to: QDCRADLLYLVFKCWKPKNSSKA*RYSLQL
Trigger: CAGTTGTAAAGAATACCGCAATGCCTTAGAGGAATT...TTTAGGCTTCCAGCATTTGAAGACGAGATATAATAAATCAGCTCTACAGTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCAATTCCTCTAAGGCATaGCGGTATTCTTTACAACTG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFNSSKA*RYSLQL
Trigger: CAGTTGTAAAGAATACCGCAATGCCTTAGAGGAATT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTTCCAAACGAGGCATTaGCTTCAGAATGAATCTATC +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFFQTRH*LQNESI
Trigger: GATAGATTCATTCTGAAGCAAATGCCTCGTTTGGAA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTTTCCAGGGATTTCTaGATTACAACAACGACTGCA +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFFSRDF*ITTTTA
Trigger: TGCAGTCGTTGTTGTAATCAAGAAATCCCTGGAAAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTTATGTGCAATGTTCTaGGTACAAACAAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFLCAMF*VQTKPL
Trigger: CAATGGCTTTGTTTGTACCAAGAACATTGCACATAA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCTGTGGAATACTTTTATaGTCTAGTTCACCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFCGILL*SSSPFS
Trigger: AGAGAAGGGTGAACTAGACAATAAAAGTATTCCACA...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTGAAAATAATCTCGAGTaGAGCATCTCATCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFENNLE*SISSPF
Trigger: AAAAGGGGATGAGATGCTCAACTCGAGATTATTTTC...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTCTCTTCCATCTCCTTTaGTGCAAAGATATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLFHLL*CKDIFH
Trigger: ATGGAAGATATCTTTGCACAAAAGGAGATGGAAGAG...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp TTTATCAAGAAAACTAAACATTGGAAGGCCTATACAGCCATGGGCATTACTAGTTTGGAGATGTGTCCATaGCATTTATCTTGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: FIKKTKHWKAYTAMGITSLEMCP*HLSCFL
Trigger: AAGAAAGCAAGATAAATGCAATGGACACATCTCCAA...ACTAGTAATGCCCATGGCTGTATAGGCCTTCCAATGTTTAGTTTTCTTGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CAATCTTCAAATCTATACATTCCTTTACTGATCTTTAACATCACAGCTGGACTCTTCCAAACGAGGCATTaGCTTCAGAATGAATCTATC +
Preference number: 5 (lower is better)
Translates to: QSSNLYIPLLIFNITAGLFQTRH*LQNESI
Trigger: GATAGATTCATTCTGAAGCAAATGCCTCGTTTGGAA...GAGTCCAGCTGTGATGTTAAAGATCAGTAAAGGAATGTATAGATTTGAAGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp CATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTCACCATCTCAAGTTTTTaGTCCCATGTAAATGTTCGA +
Preference number: 5 (lower is better)
Translates to: HHRVWVSSSDPLSFTVFFTISSF*SHVNVR
Trigger: TCGAACATTTACATGGGACAAAAAACTTGAGATGGT...GAAAAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS-3UTR CAA 90 bp TATAAGAACAAACATAAAGTCACTACACAGGAAACGTATACCAAACCAAGAAGGCTCCTAAAATTCCTGTaGACTTCACAACCATCTCAA +
Preference number: 5 (lower is better)
Translates to: YKNKHKVTTQETYTKPRRLLKFL*TSQPSQ
Trigger: TTGAGATGGTTGTGAAGTCAACAGGAATTTTAGGAG...CCTTCTTGGTTTGGTATACGTTTCCTGTGTAGTGACTTTATGTTTGTTCTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS-3UTR CAA 90 bp AAACATCATAGAGTTTGGGTTTCTTCTTCAGATCCACTTTCATTCACAGTCTTTTTGGAGATGTGTCCATaGCATTTATCTTGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: KHHRVWVSSSDPLSFTVFLEMCP*HLSCFL
Trigger: AAGAAAGCAAGATAAATGCAATGGACACATCTCCAA...AAAGACTGTGAATGAAAGTGGATCTGAAGAAGAAACCCAAACTCTATGATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 72 bp CTGGCTGAATCCAGATCAGTCGGCCCTCCCACTACCTaGTCGGCCAGGGCCTCGGGAGGAGTGGGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LAESRSVGPPTT*SARASGGVGSW
Trigger: CCAGCTGCCCACTCCTCCCGAGGCCCTGGCCGAGCAGGTAGTGGGAGGGCCGACTGATCTGGATTCAGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 72 bp CTTGAGGCTCCAGGCCTTGACTCTCCAACCCCTCCTTaGCGGCCTGCCCAACCTGGTAGTAAGCACTGTCTG +
Preference number: 6 (lower is better)
Translates to: LEAPGLDSPTPP*RPAQPGSKHCL
Trigger: CAGACAGTGCTTACTACCAGGTTGGGCAGGCCGGCAAGGAGGGGTTGGAGAGTCAAGGCCTGGAGCCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp ACCTCACAGACTGTGTTCTTGAAGGGATCTGAGGGCTGGCCCAACTaGAACTCGGAGACTGCTGCTCTCCTTGGCCCCCTTCTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: TSQTVFLKGSEGWPN*NSETAALLGPLLLA
Trigger: AGCGAGGAGAAGGGGGCCAAGGAGAGCAGCAGTCTCCGAGTTCAAGTTGGGCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS CCA 72 bp GTGGGCAGCTGGAGGTGGGTGGAGCTCGTAGAGCTCTaGCTGGACAGGGTTGTCAAGAAGCGATCCTCTTTT +
Preference number: 6 (lower is better)
Translates to: VGSWRWVELVEL*LDRVVKKRSSF
Trigger: AAAAGAGGATCGCTTCTTGACAACCCTGTCCAGCCAGAGCTCTACGAGCTCCACCCACCTCCAGCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS TCA 72 bp ACAGGCGACCTCACAGACTGTGTTCTTGAAGGGATCTaGGGGCTGGCCCAACTTGAACTCGGAGACTGCTGC +
Preference number: 6 (lower is better)
Translates to: TGDLTDCVLEGI*GLAQLELGDCC
Trigger: GCAGCAGTCTCCGAGTTCAAGTTGGGCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTGAGGTCGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS CAA 72 bp ACTGTGTTCTTGAAGGGATCTGAGGGCTGGCCCAACTaGAACTCGGAGACTGCTGCTCTCCTTGGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: TVFLKGSEGWPN*NSETAALLGPL
Trigger: AAGGGGGCCAAGGAGAGCAGCAGTCTCCGAGTTCAAGTTGGGCCAGCCCTCAGATCCCTTCAAGAACACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS GCA 72 bp CTGGGAGGAACTGAAGGCCTCTTTCTACCTTTTTCCTaGTGGAAGAGGTCCTGCAACCTGCTGTTCCACGCC +
Preference number: 6 (lower is better)
Translates to: LGGTEGLFLPFS*WKRSCNLLFHA
Trigger: GGCGTGGAACAGCAGGTTGCAGGACCTCTTCCAGCAGGAAAAAGGTAGAAAGAGGCCTTCAGTTCCTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 72 bp TATCATCTTCGGTGGCATAGAAAGCAGCTCCTGACTTaGCTCCCCGGGCCTGCCAGGGAGATGAGTGAGAAA +
Preference number: 6 (lower is better)
Translates to: YHLRWHRKQLLT*LPGPAREMSEK
Trigger: TTTCTCACTCATCTCCCTGGCAGGCCCGGGGAGGCAAGTCAGGAGCTGCTTTCTATGCCACCGAAGATGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp GGAGGAACTGAAGGCCTCTTTCTACCTTTTTCCTGCTaGAAGAGGTCCTGCAACCTGCTGTTCCACGCCTGG +
Preference number: 6 (lower is better)
Translates to: GGTEGLFLPFSC*KRSCNLLFHAW
Trigger: CCAGGCGTGGAACAGCAGGTTGCAGGACCTCTTCCAGCAGGAAAAAGGTAGAAAGAGGCCTTCAGTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp ACCTCACAGACTGTGTTCTTGAAGGGATCTGAGGGCTaGCCCAACTTGAACTCGGAGACTGCTGCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: TSQTVFLKGSEG*PNLNSETAALL
Trigger: AAGGAGAGCAGCAGTCTCCGAGTTCAAGTTGGGCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS CCA 72 bp TACTGTGCTGAGGCTTCGAAGCTGAACAGCTGTACGTaGGTCATGACCTCCACAGGCTGGTTCTGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: YCAEASKLNSCT*VMTSTGWFCFP
Trigger: AGGAAAGCAGAACCAGCCTGTGGAGGTCATGACCCACGTACAGCTGTTCAGCTTCGAAGCCTCAGCACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS CCA 72 bp TGGGCAGAAGAGCTGCTGAAGAGCACACAGAGCCTCTaGTGGTTAGCAGGGTTCAGACAGTCCACCTTTGTT +
Preference number: 6 (lower is better)
Translates to: WAEELLKSTQSL*WLAGFRQSTFV
Trigger: AACAAAGGTGGACTGTCTGAACCCTGCTAACCACCAGAGGCTCTGTGTGCTCTTCAGCAGCTCTTCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 72 bp CTGCTGTTCCACGCCTGGAGCACCTCACAGAGGCTTTaGTTCTTGGCAATCAGTGACTCAAAAATGGACTGC +
Preference number: 6 (lower is better)
Translates to: LLFHAWSTSQRL*FLAISDSKMDC
Trigger: GCAGTCCATTTTTGAGTCACTGATTGCCAAGAAGCAAAGCCTCTGTGAGGTGCTCCAGGCGTGGAACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp CTGGCCCAACTTGAACTCGGAGACTGCTGCTCTCCTTaGCCCCCTTCTCCTCGCTCTTTGTTAAAACGAAAA +
Preference number: 6 (lower is better)
Translates to: LAQLELGDCCSP*PPSPRSLLKRK
Trigger: TTTTCGTTTTAACAAAGAGCGAGGAGAAGGGGGCCAAGGAGAGCAGCAGTCTCCGAGTTCAAGTTGGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS CAA 72 bp GTTACAATCCAAGGACTGACACAAGCACTGGGAGCATaGCTGGACTGGGCAGAAGAGCTGCTGAAGAGCACA +
Preference number: 6 (lower is better)
Translates to: VTIQGLTQALGA*LDWAEELLKST
Trigger: TGTGCTCTTCAGCAGCTCTTCTGCCCAGTCCAGCAATGCTCCCAGTGCTTGTGTCAGTCCTTGGATTGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp AACTCCATTGTTACAATCCAAGGACTGACACAAGCACTGGGAGCATaGCTGGACTGGGCAGAAGAGCTGCTGAAGAGCACACAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: NSIVTIQGLTQALGA*LDWAEELLKSTQSL
Trigger: GAGGCTCTGTGTGCTCTTCAGCAGCTCTTCTGCCCAGTCCAGCAATGCTCCCAGTGCTTGTGTCAGTCCTTGGATTGTAACAATGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS TCA 72 bp CAAATGACCATCAAATACATCTTCAGAGCCACTGGCTaGATCCAGATCAGTCGGCCCTCCCACTACCTGCTC +
Preference number: 6 (lower is better)
Translates to: QMTIKYIFRATG*IQISRPSHYLL
Trigger: GAGCAGGTAGTGGGAGGGCCGACTGATCTGGATTCAGCCAGTGGCTCTGAAGATGTATTTGATGGTCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp CCAAGGTCTGGCTGTCACCCAGATGTTCAGCAATCCTaGTGCTCACTAGCTCATGTGAGGGTAAGACTTGAA +
Preference number: 6 (lower is better)
Translates to: PRSGCHPDVQQS*CSLAHVRVRLE
Trigger: TTCAAGTCTTACCCTCACATGAGCTAGTGAGCACCAGGATTGCTGAACATCTGGGTGACAGCCAGACCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp TCCACGCCTGGAGCACCTCACAGAGGCTTTGCTTCTTaGCAATCAGTGACTCAAAAATGGACTGCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: STPGAPHRGFAS*QSVTQKWTAVA
Trigger: AGCAACTGCAGTCCATTTTTGAGTCACTGATTGCCAAGAAGCAAAGCCTCTGTGAGGTGCTCCAGGCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp GGGCGTCGCTGTGGATGGAGGTTCTCAGCACAGATTTaGAATGGGAACGAATATAGAGAGGGTTGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: GRRCGWRFSAQI*NGNEYREGCLE
Trigger: TTCGAGACAACCCTCTCTATATTCGTTCCCATTCCAAATCTGTGCTGAGAACCTCCATCCACAGCGACGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp CTGCAGTTGCTGAGGGGTATCCACAGAGGAAGACATGAGCCTTGCTaGCATCTTCTCTGTCCAGTTCTTAAACTCACCCTCTTCCATCTC +
Preference number: 6 (lower is better)
Translates to: LQLLRGIHRGRHEPC*HLLCPVLKLTLFHL
Trigger: GAGATGGAAGAGGGTGAGTTTAAGAACTGGACAGAGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTGGATACCCCTCAGCAACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS TCA 72 bp GCTGGTTCTGCTTTCCTTCTGGAGTCTGTGCTCTCCTaGGGATGTGGCAAAGTGTTCTCTAACACTGAAGAG +
Preference number: 6 (lower is better)
Translates to: AGSAFLLESVLS*GCGKVFSNTEE
Trigger: CTCTTCAGTGTTAGAGAACACTTTGCCACATCCTCAGGAGAGCACAGACTCCAGAAGGAAAGCAGAACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081154.14
CDS TCA 72 bp GAGCACCTCACAGAGGCTTTGCTTCTTGGCAATCAGTaGCTCAAAAATGGACTGCAGTTGCTGAGGGGTATC +
Preference number: 6 (lower is better)
Translates to: EHLTEALLLGNQ*LKNGLQLLRGI
Trigger: GATACCCCTCAGCAACTGCAGTCCATTTTTGAGTCACTGATTGCCAAGAAGCAAAGCCTCTGTGAGGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 72 bp TTTTATAAGGTACAGGCGACCTCACAGACTGTGTTCTaGAAGGGATCTGAGGGCTGGCCCAACTTGAACTCG +
Preference number: 6 (lower is better)
Translates to: FYKVQATSQTVF*KGSEGWPNLNS
Trigger: CGAGTTCAAGTTGGGCCAGCCCTCAGATCCCTTCAAGAACACAGTCTGTGAGGTCGCCTGTACCTTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
ENSMUST00000190058.7
CDS CAA 72 bp CTGAGGGGTATCCACAGAGGAAGACATGAGCCTTGCTaGCATCTTCTCTGTCCAGTTCTTAAACTCACCCTC +
Preference number: 6 (lower is better)
Translates to: LRGIHRGRHEPC*HLLCPVLKLTL
Trigger: GAGGGTGAGTTTAAGAACTGGACAGAGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTGGATACCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp AGGCACTGGAGAATCCAACTCCTTCAGAATTATCTGTACACAGCCTaGGCCATGAACAAAGCGTCGAATGTGATGAACCATGGGGGTGTC +
Preference number: 6 (lower is better)
Translates to: RHWRIQLLQNYLYTA*AMNKASNVMNHGGV
Trigger: GACACCCCCATGGTTCATCACATTCGACGCTTTGTTCATGGCCAAGGCTGTGTACAGATAATTCTGAAGGAGTTGGATTCTCCAGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS GCA 72 bp TTGCTGAGGGGTATCCACAGAGGAAGACATGAGCCTTaGTTGCATCTTCTCTGTCCAGTTCTTAAACTCACC +
Preference number: 6 (lower is better)
Translates to: LLRGIHRGRHEP*LHLLCPVLKLT
Trigger: GGTGAGTTTAAGAACTGGACAGAGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTGGATACCCCTCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp CTGGTGGTTAGCAGGGTTCAGACAGTCCACCTTTGTTaGCCATATTACATCACTTGGAATCAATCCCCTCTC +
Preference number: 6 (lower is better)
Translates to: LVVSRVQTVHLC*PYYITWNQSPL
Trigger: GAGAGGGGATTGATTCCAAGTGATGTAATATGGCCAACAAAGGTGGACTGTCTGAACCCTGCTAACCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp TCTTGCTTTCTTCACCTTGTCTCAGTCTCCCAGGACTaGGAGGAACTGAAGGCCTCTTTCTACCTTTTTCCT +
Preference number: 6 (lower is better)
Translates to: SCFLHLVSVSQD*EELKASFYLFP
Trigger: AGGAAAAAGGTAGAAAGAGGCCTTCAGTTCCTCCCAGTCCTGGGAGACTGAGACAAGGTGAAGAAAGCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp GGAGCCCTTCTTCAGCACTGTTCCGCAGAGTTGCTTTaGACAATTCCTCTAAGGCATTGCGGTATTCTTTAC +
Preference number: 6 (lower is better)
Translates to: GALLQHCSAELL*TIPLRHCGILY
Trigger: GTAAAGAATACCGCAATGCCTTAGAGGAATTGTCCAAAGCAACTCTGCGGAACAGTGCTGAAGAAGGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 72 bp GGGAGCCCTTCTTCAGCACTGTTCCGCAGAGTTGCTTaGGACAATTCCTCTAAGGCATTGCGGTATTCTTTA +
Preference number: 6 (lower is better)
Translates to: GSPSSALFRRVA*DNSSKALRYSL
Trigger: TAAAGAATACCGCAATGCCTTAGAGGAATTGTCCAAAGCAACTCTGCGGAACAGTGCTGAAGAAGGGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp CTATTGGCTGGGAGCCCTTCTTCAGCACTGTTCCGCAGAGTTGCTTaGGACAATTCCTCTAAGGCATTGCGGTATTCTTTACAACTGAGT +
Preference number: 6 (lower is better)
Translates to: LLAGSPSSALFRRVA*DNSSKALRYSLQLS
Trigger: ACTCAGTTGTAAAGAATACCGCAATGCCTTAGAGGAATTGTCCAAAGCAACTCTGCGGAACAGTGCTGAAGAAGGGCTCCCAGCCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS TCA 72 bp TTTTCCTTCACCTGGCTGTCTGTGGATCCCAGCAAATaGCCATCAAATACATCTTCAGAGCCACTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: FSFTWLSVDPSK*PSNTSSEPLAE
Trigger: TTCAGCCAGTGGCTCTGAAGATGTATTTGATGGTCATTTGCTGGGATCCACAGACAGCCAGGTGAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 72 bp AGGTCACTGTCCTGGCTTTTTCCTTCCATGATTTCTTaGAGGCGTTTCAATACTGTGCTGAGGCTTCGAAGC +
Preference number: 6 (lower is better)
Translates to: RSLSWLFPSMIS*RRFNTVLRLRS
Trigger: GCTTCGAAGCCTCAGCACAGTATTGAAACGCCTCAAAGAAATCATGGAAGGAAAAAGCCAGGACAGTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp TTCAGATCCAACCCTGTCCAGTGGTCTGGCACCATCAAGAAATACTaGTCCATTGCTTCACAAAATCTAGTCCTATACAACTCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: FRSNPVQWSGTIKKY*SIASQNLVLYNSGE
Trigger: CTCTCCAGAGTTGTATAGGACTAGATTTTGTGAAGCAATGGACAAGTATTTCTTGATGGTGCCAGACCACTGGACAGGGTTGGATCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS TCA 72 bp AAGACTGGACTTCCAAACGAGGCATTTGCTTCAGAATaGATCTATCATCTTCGGTGGCATAGAAAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: KTGLPNEAFASE*IYHLRWHRKQL
Trigger: GAGCTGCTTTCTATGCCACCGAAGATGATAGATTCATTCTGAAGCAAATGCCTCGTTTGGAAGTCCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp CTTTCATGGTTGACTTTTCCTTCACCTGGCTGTCTGTaGATCCCAGCAAATGACCATCAAATACATCTTCAG +
Preference number: 6 (lower is better)
Translates to: LSWLTFPSPGCL*IPANDHQIHLQ
Trigger: CTGAAGATGTATTTGATGGTCATTTGCTGGGATCCACAGACAGCCAGGTGAAGGAAAAGTCAACCATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp GTCCATTGCTTCACAAAATCTAGTCCTATACAACTCTaGAGAGACCACAGTTGGCATTTTACCTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: VHCFTKSSPIQL*RDHSWHFTLSS
Trigger: GGAGGACAAGGTAAAATGCCAACTGTGGTCTCTCCAGAGTTGTATAGGACTAGATTTTGTGAAGCAATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp ACTGCAGTCATAGCACTCTTTACACTGGCTATCTGGCATCCAATATaGCTTCAGGTCACTGTCCTGGCTTTTTCCTTCCATGATTTCTTT +
Preference number: 6 (lower is better)
Translates to: TAVIALFTLAIWHPI*LQVTVLAFSFHDFF
Trigger: AAAGAAATCATGGAAGGAAAAAGCCAGGACAGTGACCTGAAGCAATATTGGATGCCAGATAGCCAGTGTAAAGAGTGCTATGACTGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp CAGACAGTCCACCTTTGTTGGCCATATTACATCACTTaGAATCAATCCCCTCTCTTCATCACTCTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: QTVHLCWPYYIT*NQSPLFITLSF
Trigger: AAAACTGAGAGTGATGAAGAGAGGGGATTGATTCCAAGTGATGTAATATGGCCAACAAAGGTGGACTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 72 bp CTTGGAATCAATCCCCTCTCTTCATCACTCTCAGTTTaGTTTCCTGATTTGCCACCTGAAGTACATGATGCA +
Preference number: 6 (lower is better)
Translates to: LGINPLSSSLSV*FPDLPPEVHDA
Trigger: TGCATCATGTACTTCAGGTGGCAAATCAGGAAACAAAACTGAGAGTGATGAAGAGAGGGGATTGATTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 72 bp TCAGACAGTCCACCTTTGTTGGCCATATTACATCACTaGGAATCAATCCCCTCTCTTCATCACTCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: SDSPPLLAILHH*ESIPSLHHSQF
Trigger: AAACTGAGAGTGATGAAGAGAGGGGATTGATTCCAAGTGATGTAATATGGCCAACAAAGGTGGACTGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 72 bp GTCTCCTGTATAGCCCATAAATTTTCCAGGGATTTCTaGATTACAACAACGACTGCAGAAAATCTGCCCACA +
Preference number: 6 (lower is better)
Translates to: VSCIAHKFSRDF*ITTTTAENLPT
Trigger: TGTGGGCAGATTTTCTGCAGTCGTTGTTGTAATCAAGAAATCCCTGGAAAATTTATGGGCTATACAGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 72 bp AAAGTCAAGGAAAGACTGGACTTCCAAACGAGGCATTaGCTTCAGAATGAATCTATCATCTTCGGTGGCATA +
Preference number: 6 (lower is better)
Translates to: KVKERLDFQTRH*LQNESIIFGGI
Trigger: TATGCCACCGAAGATGATAGATTCATTCTGAAGCAAATGCCTCGTTTGGAAGTCCAGTCTTTCCTTGACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp GGCATTAGCATCAGAAAATTGAAGTTCCACATGAGGATTTGTGAGTaGTTTCTTCTGTGTATCTCCTCCATCTACTTCATCTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: GISIRKLKFHMRICE*FLLCISSIYFILRL
Trigger: GAGCCTCAAGATGAAGTAGATGGAGGAGATACACAGAAGAAACAACTCACAAATCCTCATGTGGAACTTCAATTTTCTGATGCTAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CAA 90 bp ATTACATCACTTGGAATCAATCCCCTCTCTTCATCACTCTCAGTTTaGTTTCCTGATTTGCCACCTGAAGTACATGATGCATCTTTTGAA +
Preference number: 6 (lower is better)
Translates to: ITSLGINPLSSSLSV*FPDLPPEVHDASFE
Trigger: TTCAAAAGATGCATCATGTACTTCAGGTGGCAAATCAGGAAACAAAACTGAGAGTGATGAAGAGAGGGGATTGATTCCAAGTGATGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5
CDS CCA 72 bp GGAATATGTGAGAATTGTATGTTGATATCCAGGCACTaGAGAATCCAACTCCTTCAGAATTATCTGTACACA +
Preference number: 6 (lower is better)
Translates to: GICENCMLISRH*RIQLLQNYLYT
Trigger: TGTGTACAGATAATTCTGAAGGAGTTGGATTCTCCAGTGCCTGGATATCAACATACAATTCTCACATATTCC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081154.14
ENSMUST00000097707.5