RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3R4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032571

Ensembl transcript IDs: ENSMUST00000065778.13, ENSMUST00000186943.2, ENSMUST00000188784.2, ENSMUST00000190358.2, ENSMUST00000191268.7

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTaGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCAAAACCC +
Preference number: 1 (lower is better)
Translates to: AHEESHHAYILPHCG*DLLSHETVTVTSKP
Trigger: GGGTTTTGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR-3UTR CCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATCATCCTTCCCCACTGTaGCTGGGATTTGCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHHPSPL*LGFAQP
Trigger: TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATG...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR CAA 90 bp ACACTTCTCACCTGTTCTGTTCCATATGCAGCAAGCGCTCCCAGGTaGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTC +
Preference number: 2 (lower is better)
Translates to: TLLTCSVPYAASAPR*CYLASSSEMHMKKV
Trigger: GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATATGGAACAGAACAGGTGAGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR-3UTR TCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCGGATTTGCTCAGCCATaGAACAGTAACAGTCACTTC +
Preference number: 2 (lower is better)
Translates to: APRLCYLASSSEMHMKKVGFAQP*NSNSHF
Trigger: GAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCC...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR-3UTR TCA 90 bp GGTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGCAGCACTCAGAAGGCTaGGGCAGGAGGTCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: GIKSVFIGNRFYSRFVVEQHSEG*GRRSAL
Trigger: CAGGGCAGACCTCCTGCCTCAGCCTTCTGAGTGCTG...CTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
3UTR-3UTR TCA 90 bp ATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGAGGTCTGCCCTGAGTaGGCTAAGAGTGAATTCCAG +
Preference number: 2 (lower is better)
Translates to: IKSVFIGNRFYSRFVVEDEVCPE*AKSEFQ
Trigger: CTGGAATTCACTCTTAGCTCACTCAGGGCAGACCTC...GTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
3UTR TCA 72 bp GGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATaGAGAAAGTCACCATGCCTACATCCTTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: GCAIWPVLQRCT*RKSPCLHPSPL
Trigger: CAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR GCA 72 bp TGTTCTGTTCCATATGCAGCAAGCGCTCCCAGGTTGTaGTATCTGGCCAGTTCTTCAGAGATGCACATGAAG +
Preference number: 3 (lower is better)
Translates to: CSVPYAASAPRL*YLASSSEMHMK
Trigger: CTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATATGGAACAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR TCA 72 bp CATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATaGAACAGTAACAGTCACTTCAAAACCCACGTTTGT +
Preference number: 3 (lower is better)
Translates to: HPSPLWLGFAQP*NSNSHFKTHVC
Trigger: ACAAACGTGGGTTTTGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR CCA 72 bp CGTTTGTTCTCTAGAAGTCCTTCGTGTCCTGAGCTATaGTACATTTCGAATTTTACAGCATTTTATACAAGT +
Preference number: 3 (lower is better)
Translates to: RLFSRSPSCPEL*YISNFTAFYTS
Trigger: ACTTGTATAAAATGCTGTAAAATTCGAAATGTACCATAGCTCAGGACACGAAGGACTTCTAGAGAACAAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAGTGGCGGTGCGCTGCTaGCCCAGAGAGTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDAVAVRC*PRESVS
Trigger: GGAGACTGACTCTCTGGGCCAGCAGCGCACCGCCAC...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATGGGCCAGATGCAGGATaGGCTCCAAGGCGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDGPDAG*APRRPV
Trigger: AACTGGCCGCCTTGGAGCTCATCCTGCATCTGGCCC...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAACTCCTCAGCATCGCTaGGGCCTTGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDATPQHR*GLAGAG
Trigger: CCCTGCTCCAGCAAGGCCTCAGCGATGCTGAGGAGT...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAAGTCTGGGGGCCAGATaGAGGATGAGCTCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPSLGAR*RMSSKA
Trigger: CGCCTTGGAGCTCATCCTGCATCTGGCCCCCAGACT...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCACGCTGCTCGTGCCTATaGACAGCCAGCACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPRCSCL*TASTGG
Trigger: TCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCG...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATACAGTGGCGGTGCGCTaGTGGCCCAGAGAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDTVAVR*WPRESV
Trigger: GACTGACTCTCTGGGCCAGCAGCGCACCGCCACTGT...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATTTCAGACAGTGGCGGTaGGCTGCTGGCCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHFRQWR*AAGPES
Trigger: ACTCTCTGGGCCAGCAGCGCACCGCCACTGTCTGAA...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCACCACCCAGGTGGAGGTaGCTTGCTCTCCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSPPRWR*LALPLG
Trigger: GCCGAGTGGGAGAGCAAGCCACCTCCACCTGGGTGG...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTCCACCCAGGTGGAGGTaGCTTGCTCTCCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTPPRWR*LALPLG
Trigger: GCCGAGTGGGAGAGCAAGCCACCTCCACCTGGGTGG...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGCCGGATGCGAGCTCTaGAGGGATGACAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHAGCEL*RDDSDW
Trigger: CCAGTCACTGTCATCCCTCCAGAGCTCGCATCCGGC...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAGTGGCGGTGCGCTGCTaGCCCAGAGAGTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEEVAVRC*PRESVS
Trigger: GGAGACTGACTCTCTGGGCCAGCAGCGCACCGCCAC...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATAGACGCACAAGCGTGTaGTCCCACTCTCCATCAGCG +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHRRTSV*SHSPSA
Trigger: CGCTGATGGAGAGTGGGATCACACGCTTGTGCGTCT...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTCAGACAGTGGCGGTaGGCTGCTGGCCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDFRQWR*AAGPES
Trigger: ACTCTCTGGGCCAGCAGCGCACCGCCACTGTCTGAA...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAATGGTAGCGTCATCCTaGGCCAGGTGGGCTATGCCG +
Preference number: 4 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDAMVASS*ARWAMP
Trigger: CGGCATAGCCCACCTGGCCCAGGATGACGCTACCAT...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGGGCAAGGACTTTGGTaGGTGTCCTCAGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHEGQGLW*VSSGLQ
Trigger: CTGAAGCCCTGAGGACACTCACCAAAGTCCTTGCCC...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGACTCCTCAGCATCGCTaGGGCCTTGCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVTPQHR*GLAGAG
Trigger: CCCTGCTCCAGCAAGGCCTCAGCGATGCTGAGGAGT...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATGGTGGCTTCCCAGGCTaGACAACCTCATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDGGFPG*TTSWSL
Trigger: CAGTGACCATGAGGTTGTTCAGCCTGGGAAGCCACC...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATTGTCCACGCGTTGCTTaGAGACCTGAGATCCCATCC +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHCPRVA*RPEIPS
Trigger: GGATGGGATCTCAGGTCTTCAAGCAACGCGTGGACA...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAACCAGGCCTTCCCGGTaGTTGGCTCGAGCGACTTTA +
Preference number: 4 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDATRPSR*LARATL
Trigger: TAAAGTCGCTCGAGCCAAGCACCGGGAAGGCCTGGT...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCAAGTCTGGGGGCCAGATaGAGGATGAGCTCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSSLGAR*RMSSKA
Trigger: CGCCTTGGAGCTCATCCTGCATCTGGCCCCCAGACT...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTACGGCCGTCAGGATCTaGAAGGCGATCCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESTAVRI*KAIQRF
Trigger: GAAGCGCTGGATCGCCTTCCAGATCCTGACGGCCGT...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTGGTGGGGTCCTCAGGTaGAGGGCAGTCGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESGGVLR*RAVEKR
Trigger: TCTCTTCTCGACTGCCCTCCACCTGAGGACCCCACC...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACAGGACGCCACCCAGGTaGAGGTGGCTTGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHRTPPR*RWLALP
Trigger: TGGGAGAGCAAGCCACCTCCACCTGGGTGGCGTCCT...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGAGGACGCCACCCAGGTaGAGGTGGCTTGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVRTPPR*RWLALP
Trigger: TGGGAGAGCAAGCCACCTCCACCTGGGTGGCGTCCT...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCGCCGGATGCGAGCTCTaGAGGGATGACAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVAGCEL*RDDSDW
Trigger: CCAGTCACTGTCATCCCTCCAGAGCTCGCATCCGGC...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTGGGCGGAGTGGAGCCTaGTTTTCAGTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESGRSGA*FSVPPA
Trigger: AGCTGGAGGAACTGAAAATCAGGCTCCACTCCGCCC...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGGGCCAGATGCAGGATaGGCTCCAAGGCGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHGPDAG*APRRPV
Trigger: AACTGGCCGCCTTGGAGCTCATCCTGCATCTGGCCC...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTGGGCAAGGACTTTGGTaGGTGTCCTCAGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESGQGLW*VSSGLQ
Trigger: CTGAAGCCCTGAGGACACTCACCAAAGTCCTTGCCC...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAGGTCGCTTAGCAACGTaGCCACCTTCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEEGRLAT*PPSAGP
Trigger: TGGTCCAGCAGAAGGTGGTCACGTTGCTAAGCGACC...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTGGTGGCTTCCCAGGCTaGACAACCTCATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESGGFPG*TTSWSL
Trigger: CAGTGACCATGAGGTTGTTCAGCCTGGGAAGCCACC...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGACCTGTGGAGACGTTaGCAAAGGGACACAGATACC +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHDLWRR*QRDTDT
Trigger: GGTATCTGTGTCCCTTTGTCAACGTCTCCACAGGTC...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAACCAGGCCTTCCCGGTaGTTGGCTCGAGCGACTTTA +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEETRPSR*LARATL
Trigger: TAAAGTCGCTCGAGCCAAGCACCGGGAAGGCCTGGT...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACCGGACTCCAGATTTGTaGGCTTGGTCCACGGCCGTC +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHRTPDL*AWSTAV
Trigger: GACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCG...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACCGCTGCTCGTGCCTATaGACAGCCAGCACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHRCSCL*TASTGG
Trigger: TCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCG...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTCCATCTGCAGGGCTaGAGTAGATGCCATGGACGC +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDFHLQG*SRCHGR
Trigger: GCGTCCATGGCATCTACTGCAGCCCTGCAGATGGAA...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAAGGGGAGGCAGTTCTaGGCGGAGTGGAGCCTGATT +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEEKGRQF*AEWSLI
Trigger: AATCAGGCTCCACTCCGCCCAGAACTGCCTCCCCTT...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACACGGCCGTCAGGATCTaGAAGGCGATCCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYTAVRI*KAIQRF
Trigger: GAAGCGCTGGATCGCCTTCCAGATCCTGACGGCCGT...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCACCAGATTTGTGCGCTTaGTCCACGGCCGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSPDLCA*STAVRI
Trigger: GATCCTGACGGCCGTGGACCAAGCGCACAAATCTGG...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAGTCTTGATGTCTCCGTaGCGGACTCCAGATTTGTGC +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPVLMSP*RTPDLC
Trigger: GCACAAATCTGGAGTCCGCCACGGAGACATCAAGAC...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACGGTGGGGTCCTCAGGTaGAGGGCAGTCGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYGGVLR*RAVEKR
Trigger: TCTCTTCTCGACTGCCCTCCACCTGAGGACCCCACC...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAGGACAGAGTCATTGCTaGAATGCAACAGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPGQSHC*NATGRE
Trigger: CTCCCTACCTGTTGCATTTCAGCAATGACTCTGTCC...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGAGACGCACAAGCGTGTaGTCCCACTCTCCATCAGCG +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVRRTSV*SHSPSA
Trigger: CGCTGATGGAGAGTGGGATCACACGCTTGTGCGTCT...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCAACTTGTCTCCCAGTaGTGCCTAAGGCGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESQLVSQ*CLRRPS
Trigger: ACTTGGCCGCCTTAGGCATCACTGGGAGACAAGTTG...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAACGTTGCTTGAAGACCTaGGATCCCATCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHERCLKT*DPIQPE
Trigger: CTCTGGTTGGATGGGATCTCAGGTCTTCAAGCAACG...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCGTCACAATGAAGCCCTaGGTGGTCTGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVVTMKP*VVWKVA
Trigger: TGCCACCTTCCAGACCACTCAGGGCTTCATTGTGAC...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTCTGGGAAGGAGCGATaGCAGCCAGCTGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESSGKER*QPADFP
Trigger: TGGGAAATCAGCTGGCTGGCATCGCTCCTTCCCAGA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACTCAGACGCCTTTTCTaGTGCTTTCTGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDALRRLF*CFLEGE
Trigger: CTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCTGAG...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCGGACTCCAGATTTGTaGGCTTGGTCCACGGCCGTC +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCRTPDL*AWSTAV
Trigger: GACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCG...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAATGCTGGACCATCTCATaGAAGGCCTGGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEECWTIS*KAWSSV
Trigger: CACAGAGCTCCAGGCCTTGCATGAGATGGTCCAGCA...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACCGCTCCGCGTTGCACTaGTCCCTCTTCTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYRSALH*SLFCCM
Trigger: CATACAGCAGAAGAGGGAGCAGTGCAACGCGGAGCG...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCGGCAAGAACGGACTGTaGCCCGGAGTTGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVGKNGL*PGVEVM
Trigger: CATCACTTCAACTCCGGGGCACAGTCCGTTCTTGCC...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATGTTGCCCTGAACAGCTaGGATTACCCAGGACTGGTA +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDVALNS*DYPGLV
Trigger: TACCAGTCCTGGGTAATCGCAGCTGTTCAGGGCAAC...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATTGTACTCTAACTCGGTaGCGAACATCCCACCGTCAA +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHCTLTR*RTSHRQ
Trigger: TTGACGGTGGGATGTTCGCCACCGAGTTAGAGTACA...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTCTCCATCATCTGCTTaGCTATGCGCTCCGCGTTGC +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESSPSSA*LCAPRC
Trigger: GCAACGCGGAGCGCATAGCCAAGCAGATGATGGAGA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAGAGAGCCATTCACCGTaGCATAGGCAAGAACGGACT +
Preference number: 4 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDAESHSP*HRQERT
Trigger: AGTCCGTTCTTGCCTATGCCACGGTGAATGGCTCTC...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCACACAGCCAGCACTGGTaGATGTCCACGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSHSQHW*MSTAKE
Trigger: TTCCTTTGCCGTGGACATCCACCAGTGCTGGCTGTG...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGTCGCTTAGCAACGTaGCCACCTTCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCGRLAT*PPSAGP
Trigger: TGGTCCAGCAGAAGGTGGTCACGTTGCTAAGCGACC...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATTCAGTCATCCCCTGTaGGAGCAACTTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPFSHPL*EQLLQK
Trigger: CTTCTGAAGAAGTTGCTCTCACAGGGGATGACTGAA...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTGCTGTATGAGCTGCTaGAGTTCAGTCTTGCACGTG +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDCCMSC*SSVLHV
Trigger: CACGTGCAAGACTGAACTTCAGCAGCTCATACAGCA...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAATGCTGTATGAGCTGCTaGAGTTCAGTCTTGCACGTG +
Preference number: 4 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHECCMSC*SSVLHV
Trigger: CACGTGCAAGACTGAACTTCAGCAGCTCATACAGCA...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCCACGCGTTGCTTaGAGACCTGAGATCCCATCC +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHCPRVA*RPEIPS
Trigger: GGATGGGATCTCAGGTCTTCAAGCAACGCGTGGACA...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACGTCACAATGAAGCCCTaGGTGGTCTGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYVTMKP*VVWKVA
Trigger: TGCCACCTTCCAGACCACTCAGGGCTTCATTGTGAC...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCACGTGGGATCCTGAATTaGAAAGACCTTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPRGILN*KDLHNH
Trigger: GTGGTTGTGAAGGTCTTTGCAATTCAGGATCCCACG...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCAAGACGCCTTTTCTGCTaGTTTCTGGAAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSRRLFC*FLEGEA
Trigger: TGCCTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCT...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTCTCAGACGCCTTTTCTaGTGCTTTCTGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTLRRLF*CFLEGE
Trigger: CTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCTGAG...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCACAGCCACACCGACTATaGTATCAAAGAAAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPQPHRL*YQRKLH
Trigger: GTGGAGCTTTCTTTGATAGCATAGTCGGTGTGGCTG...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATCAGCCACACCGACTATaGTATCAAAGAAAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHQPHRL*YQRKLH
Trigger: GTGGAGCTTTCTTTGATAGCATAGTCGGTGTGGCTG...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTTACACCTTTCTGGCTaGTGTCGTGGAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESLHLSG*CRGGGS
Trigger: AGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACGGCAAGAACGGACTGTaGCCCGGAGTTGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYGKNGL*PGVEVM
Trigger: CATCACTTCAACTCCGGGGCACAGTCCGTTCTTGCC...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTTCCATCTGCAGGGCTaGAGTAGATGCCATGGACGC +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVFHLQG*SRCHGR
Trigger: GCGTCCATGGCATCTACTGCAGCCCTGCAGATGGAA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCAGTTCTGGGCGGAGTaGAGCCTGATTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESQFWAE*SLIFSS
Trigger: GGAACTGAAAATCAGGCTCCACTCCGCCCAGAACTG...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACACTGCCGGAACAGCATaGCTGCTTTCTCAGACGCCT +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYTAGTA*LLSQTP
Trigger: AGGCGTCTGAGAAAGCAGCCATGCTGTTCCGGCAGT...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCAGTCTTGATGTCTCCGTaGCGGACTCCAGATTTGTGC +
Preference number: 4 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSVLMSP*RTPDLC
Trigger: GCACAAATCTGGAGTCCGCCACGGAGACATCAAGAC...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATAGAGAAAGGTTTCCTTaGCGAACTGGGCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHRERFP*RTGPCK
Trigger: CTTACATGGCCCAGTTCGCCAAGGAAACCTTTCTCT...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTGAGCATAGTCAAATATaGAGCGGCTCACCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESEHSQI*SGSPAP
Trigger: AGGAGCCGGTGAGCCGCTCCATATTTGACTATGCTC...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAATTTAGGCAGGGCCTGTaGGATATTCGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEEFRQGL*DIRWLQ
Trigger: TTGGAGCCACCGAATATCCCACAGGCCCTGCCTAAA...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGATGCACAGCCAGCACTaGTGGATGTCCACGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVMHSQH*WMSTAK
Trigger: CTTTGCCGTGGACATCCACCAGTGCTGGCTGTGCAT...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCCTGGAGATGGGCAACTaGAACCTCATGTCCCAACAC +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVLEMGN*NLMSQH
Trigger: GTGTTGGGACATGAGGTTCCAGTTGCCCATCTCCAG...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAACTGGAGATGGGCAACTaGAACCTCATGTCCCAACAC +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEELEMGN*NLMSQH
Trigger: GTGTTGGGACATGAGGTTCCAGTTGCCCATCTCCAG...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAAACATAGGACCTCTCTaGGGAAACCAAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPNIGPL*GNQVPE
Trigger: TTCTGGGACTTGGTTTCCCCAGAGAGGTCCTATGTT...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR CAA 72 bp ACCTGTTCTGTTCCATATGCAGCAAGCGCTCCCAGGTaGTGCTATCTGGCCAGTTCTTCAGAGATGCACATG +
Preference number: 4 (lower is better)
Translates to: TCSVPYAASAPR*CYLASSSEMHM
Trigger: CATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATATGGAACAGAACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCCCCAGTTCCAACTGGTaGCCATCACATTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVPSSNW*PSHSLS
Trigger: AGACAGAGAATGTGATGGTCACCAGTTGGAACTGGG...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAGCTCGTTCTCCATGTTaGGAGTTTTCAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDAARSPC*EFSAAQ
Trigger: TTGTGCAGCTGAAAACTCTCAACATGGAGAACGAGC...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGCTCGTTCTCCATGTTaGGAGTTTTCAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHEARSPC*EFSAAQ
Trigger: TTGTGCAGCTGAAAACTCTCAACATGGAGAACGAGC...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTATCCACAGGTTAGGGTaGCACAGGAAGGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTIHRLG*HRKGAI
Trigger: TATTGCTCCCTTCCTGTGTCACCCTAACCTGTGGAT...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTATCCACAGGTTAGGGTaGCACAGGAAGGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESIHRLG*HRKGAI
Trigger: TATTGCTCCCTTCCTGTGTCACCCTAACCTGTGGAT...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAGGTCAAGATACGGCATaGGCTTGCAGTAGACATCAG +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEEGQDTA*ACSRHQ
Trigger: CTGATGTCTACTGCAAGCTCATGCCGTATCTTGACC...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTCAGTCATCCCCTGTaGGAGCAACTTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDFSHPL*EQLLQK
Trigger: CTTCTGAAGAAGTTGCTCTCACAGGGGATGACTGAA...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCAACTTGTCTCCCAGTaGTGCCTAAGGCGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCQLVSQ*CLRRPS
Trigger: ACTTGGCCGCCTTAGGCATCACTGGGAGACAAGTTG...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTCTTACTTGGGATGTaGGCTGCTTCTGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDFLLGM*AASETC
Trigger: ACAGGTCTCAGAAGCAGCTCACATCCCAAGTAAGAA...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTCCTTATTTTCATGTCTaGGCCAGCGGTCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTPYFHV*ASGQQD
Trigger: ATCCTGCTGACCGCTGGCTCAGACATGAAAATAAGG...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAACCTTCTGCTTATTCTaGATTTCCTGGACGACCTCG +
Preference number: 4 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHETFCLF*ISWTTS
Trigger: CGAGGTCGTCCAGGAAATTCAGAATAAGCAGAAGGT...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTCTGTGATGATGTCATaGTGTCCCACAGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESSVMMS*CPTGRD
Trigger: GTCTCTGCCTGTGGGACATCATGACATCATCACAGA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGCCGGAACAGCATGGCTaGTTTCTCAGACGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVPEQHG*FLRRLF
Trigger: GAAAAGGCGTCTGAGAAAGCAGCCATGCTGTTCCGG...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACCCGGAACAGCATGGCTaGTTTCTCAGACGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHPEQHG*FLRRLF
Trigger: GAAAAGGCGTCTGAGAAAGCAGCCATGCTGTTCCGG...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATTGCTGGACCATCTCATaGAAGGCCTGGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHCWTIS*KAWSSV
Trigger: CACAGAGCTCCAGGCCTTGCATGAGATGGTCCAGCA...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTTACACCTTTCTGGCTaGTGTCGTGGAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVLHLSG*CRGGGS
Trigger: AGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACCAGTTCTGGGCGGAGTaGAGCCTGATTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYQFWAE*SLIFSS
Trigger: GGAACTGAAAATCAGGCTCCACTCCGCCCAGAACTG...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTTTTCTGCTGCTTTCTaGAAGGGGAGGCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTFSAAF*KGRQFW
Trigger: CCAGAACTGCCTCCCCTTCCAGAAAGCAGCAGAAAA...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATGTCTTGACGGCCGTCAGGATCTaGAAGGCGATCCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: IGNRFYSRFVVEDGLDVLTAVRI*KAIQRF
Trigger: GAAGCGCTGGATCGCCTTCCAGATCCTGACGGCCGT...CAAGACATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAATAGTTGAAATCCGCTaGGTTGTCCTCGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPIVEIR*VVLGKI
Trigger: TATCTTCCCGAGGACAACCCAGCGGATTTCAACTAT...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTGTACTCTAACTCGGTaGCGAACATCCCACCGTCAA +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTCTLTR*RTSHRQ
Trigger: TTGACGGTGGGATGTTCGCCACCGAGTTAGAGTACA...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAAGAGAAAGGTTTCCTTaGCGAACTGGGCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHERERFP*RTGPCK
Trigger: CTTACATGGCCCAGTTCGCCAAGGAAACCTTTCTCT...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATCCCTTCTGCTTTTTCTaGCAAATCATGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHPFCFF*QIMSTE
Trigger: CTCTGTGGACATGATTTGCCAGAAAAAGCAGAAGGG...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTTCAGCCCGCACTCTTaGGACAGAGTCATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESFSPHS*DRVIAE
Trigger: TTCAGCAATGACTCTGTCCCAAGAGTGCGGGCTGAA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCTTCAGCCCGCACTCTTaGGACAGAGTCATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVFSPHS*DRVIAE
Trigger: TTCAGCAATGACTCTGTCCCAAGAGTGCGGGCTGAA...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAATTGCGAGGAACCTCTTaGACAAGGGCAAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEELRGTS*TRARTL
Trigger: CAAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCAA...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACGAGCATAGTCAAATATaGAGCGGCTCACCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYEHSQI*SGSPAP
Trigger: AGGAGCCGGTGAGCCGCTCCATATTTGACTATGCTC...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTTTAGGCAGGGCCTGTaGGATATTCGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHFRQGL*DIRWLQ
Trigger: TTGGAGCCACCGAATATCCCACAGGCCCTGCCTAAA...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCACAGCCAGCACTGGTaGATGTCCACGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCHSQHW*MSTAKE
Trigger: TTCCTTTGCCGTGGACATCCACCAGTGCTGGCTGTG...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTATGCACAGCCAGCACTaGTGGATGTCCACGGCAAAG +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCMHSQH*WMSTAK
Trigger: CTTTGCCGTGGACATCCACCAGTGCTGGCTGTGCAT...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGGACAGAGTCATTGCTaGAATGCAACAGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVGQSHC*NATGRE
Trigger: CTCCCTACCTGTTGCATTTCAGCAATGACTCTGTCC...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTATTCGGTGGCTCCAATaGCCCAAACATGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESIRWLQ*PKHAFP
Trigger: TGGAAAAGCATGTTTGGGTCATTGGAGCCACCGAAT...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGACCTGTGGAGACGTTaGCAAAGGGACACAGATACC +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCDLWRR*QRDTDT
Trigger: GGTATCTGTGTCCCTTTGTCAACGTCTCCACAGGTC...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCCAGCCATCTTCCTTCTaGTCCAGAATCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVQPSSF*SRILLC
Trigger: ACAAAGCAGGATTCTGGATCAGAAGGAAGATGGCTG...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCGTTGCTTGAAGACCTaGGATCCCATCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCRCLKT*DPIQPE
Trigger: CTCTGGTTGGATGGGATCTCAGGTCTTCAAGCAACG...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACCCTTATTTTCATGTCTaGGCCAGCGGTCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHPYFHV*ASGQQD
Trigger: ATCCTGCTGACCGCTGGCTCAGACATGAAAATAAGG...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTACCTTCTGCTTATTCTaGATTTCCTGGACGACCTCG +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESTFCLF*ISWTTS
Trigger: CGAGGTCGTCCAGGAAATTCAGAATAAGCAGAAGGT...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTCTGTGATGATGTCATaGTGTCCCACAGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHSVMMS*CPTGRD
Trigger: GTCTCTGCCTGTGGGACATCATGACATCATCACAGA...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATAGACGCCTTTTCTGCTaGTTTCTGGAAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHRRLFC*FLEGEA
Trigger: TGCCTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCT...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTCCTGGACTCCCCTTCTaGTTTTTCTGGCAAATCATG +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTPGLPF*FFWQIM
Trigger: CATGATTTGCCAGAAAAAGCAGAAGGGGAGTCCAGG...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAAAAGCTCCACGCAGGTaGCAATCATTCTTATCATTG +
Preference number: 4 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPKAPRR*QSFLSL
Trigger: CAATGATAAGAATGATTGGCACCTGCGTGGAGCTTT...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATAGCACCATTATCAGATaGTATGGCCAAGTAGTGGGA +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDSTIIR*YGQVVG
Trigger: TCCCACTACTTGGCCATAGCATCTGATAATGGTGCT...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATCCGAAAAGATGTCCATaGCTCTCTTCAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHPKRCP*LSSALP
Trigger: GGGGAGAGCTGAAGAGAGCCATGGACATCTTTTCGG...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTTGCGAGGAACCTCTTaGACAAGGGCAAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVLRGTS*TRARTL
Trigger: CAAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCAA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCTTCTTCTGGCGCATGTaGAGATGTCTGAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVFFWRM*RCLNKL
Trigger: CAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAA...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGAGAGCCATTCACCGTaGCATAGGCAAGAACGGACT +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHESHSP*HRQERT
Trigger: AGTCCGTTCTTGCCTATGCCACGGTGAATGGCTCTC...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR CAA 72 bp CACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTaGCTCAGCCATGAAACAGTAACAGTCACTTCAAAA +
Preference number: 4 (lower is better)
Translates to: HHAYILPHCGWD*LSHETVTVTSK
Trigger: TTTTGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGGGCGGAGTGGAGCCTaGTTTTCAGTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SVFIGNRFYSRFVVEDGLGRSGA*FSVPPA
Trigger: AGCTGGAGGAACTGAAAATCAGGCTCCACTCCGCCC...CAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCCCAGTTCCAACTGGTaGCCATCACATTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCPSSNW*PSHSLS
Trigger: AGACAGAGAATGTGATGGTCACCAGTTGGAACTGGG...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTGTCAAAGAAATAGTTaGAATCCGCTGGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDCQRNS*NPLGCP
Trigger: AGGACAACCCAGCGGATTTCAACTATTTCTTTGACA...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAGTTACCAAGTCTCTaGTACTGCGATCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHELPSL*YCDLQF
Trigger: AAATTGAAGATCGCAGTATCAGAGACTTGGTAACTC...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGGTCAAGATACGGCATaGGCTTGCAGTAGACATCAG +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHGQDTA*ACSRHQ
Trigger: CTGATGTCTACTGCAAGCTCATGCCGTATCTTGACC...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACATTCGGTGGCTCCAATaGCCCAAACATGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHIRWLQ*PKHAFP
Trigger: TGGAAAAGCATGTTTGGGTCATTGGAGCCACCGAAT...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTAAAACGTTAGCGTCTTaGCTCGTCCTCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCKTLAS*LVLQFG
Trigger: GCCGAATTGGAGGACGAGTCAAGACGCTAACGTTTT...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTCTGCTTTGTAGAGGGTaGATTTTAGGAGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTLLCRG*ILGDLG
Trigger: ACCCAAGTCTCCTAAAATTCACCCTCTACAAAGCAG...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCTGCTTTGTAGAGGGTaGATTTTAGGAGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESLLCRG*ILGDLG
Trigger: ACCCAAGTCTCCTAAAATTCACCCTCTACAAAGCAG...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACCAGCCATCTTCCTTCTaGTCCAGAATCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYQPSSF*SRILLC
Trigger: ACAAAGCAGGATTCTGGATCAGAAGGAAGATGGCTG...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTTGAGAGTTTTCAGCTaGACAAGCTCCAGGAATCGC +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVLRVFS*TSSRNR
Trigger: GCGATTCCTGGAGCTTGTGCAGCTGAAAACTCTCAA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATCATGAAGTCCTTCAGTaGCAGAAGTTTATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDHEVLQ*QKFIFL
Trigger: GAGGAAGATAAACTTCTGGCACTGAAGGACTTCATG...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCATGGAGACTTCATTGTTaGCCTGAACAGCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSWRLHC*PEQLRL
Trigger: TAATCGCAGCTGTTCAGGGCAACAATGAAGTCTCCA...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATAAGGGGAGGCAGTTCTaGGCGGAGTGGAGCCTGATT +
Preference number: 4 (lower is better)
Translates to: VFIGNRFYSRFVVEDGLDKGRQF*AEWSLI
Trigger: AATCAGGCTCCACTCCGCCCAGAACTGCCTCCCCTT...ATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTATAGTTGAAATCCGCTaGGTTGTCCTCGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESIVEIR*VVLGKI
Trigger: TATCTTCCCGAGGACAACCCAGCGGATTTCAACTAT...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTCCCTTCTGCTTTTTCTaGCAAATCATGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTPFCFF*QIMSTE
Trigger: CTCTGTGGACATGATTTGCCAGAAAAAGCAGAAGGG...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTAGGAAAGTGATCATGTaGGACAAGAGAACGTCGTTG +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTRKVIM*DKRTSL
Trigger: CAACGACGTTCTCTTGTCCCACATGATCACTTTCCT...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTAGGAAAGTGATCATGTaGGACAAGAGAACGTCGTTG +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESRKVIM*DKRTSL
Trigger: CAACGACGTTCTCTTGTCCCACATGATCACTTTCCT...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTTCTTCTGGCGCATGTaGAGATGTCTGAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHFFWRM*RCLNKL
Trigger: CAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAA...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCCATTATCAGATGCTATaGCCAAGTAGTGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVHYQML*PSSGSL
Trigger: AAGGCTCCCACTACTTGGCCATAGCATCTGATAATG...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTTTCCATGTCCCACATaGAGACTTCATTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTFPCPT*RLHCCP
Trigger: AGGGCAACAATGAAGTCTCCATGTGGGACATGGAAA...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTTTCCATGTCCCACATaGAGACTTCATTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESFPCPT*RLHCCP
Trigger: AGGGCAACAATGAAGTCTCCATGTGGGACATGGAAA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACAACATAGGACCTCTCTaGGGAAACCAAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHNIGPL*GNQVPE
Trigger: TTCTGGGACTTGGTTTCCCCAGAGAGGTCCTATGTT...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAAGCTTTGGCTCGATTTaGTTTCATCATGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHESFGSI*FHHEVL
Trigger: AAGGACTTCATGATGAAATCAAATCGAGCCAAAGCT...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATTTCTTACTTGGGATGTaGGCTGCTTCTGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHFLLGM*AASETC
Trigger: ACAGGTCTCAGAAGCAGCTCACATCCCAAGTAAGAA...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGTTCATCAGAGACTCTaGTGCGATTCACAGCAGATT +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVVHQRL*CDSQQI
Trigger: AATCTGCTGTGAATCGCATCAGAGTCTCTGATGAAC...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACGTTCATCAGAGACTCTaGTGCGATTCACAGCAGATT +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYVHQRL*CDSQQI
Trigger: AATCTGCTGTGAATCGCATCAGAGTCTCTGATGAAC...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCGTGGGATCCTGAATTaGAAAGACCTTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCRGILN*KDLHNH
Trigger: GTGGTTGTGAAGGTCTTTGCAATTCAGGATCCCACG...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGCGGACTCCAGATTTGTaGGCTTGGTCCACGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SKVCLLAIGFIPDLLWRTRTPDL*AWSTAV
Trigger: GACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCG...CGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR GCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCCAAAATCCGCTCATCTaGAGAGAGAAAGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVQNPLI*REKGFL
Trigger: AAGGAAACCTTTCTCTCTGCAGATGAGCGGATTTTG...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCCTGGACTCCCCTTCTaGTTTTTCTGGCAAATCATG +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCPGLPF*FFWQIM
Trigger: CATGATTTGCCAGAAAAAGCAGAAGGGGAGTCCAGG...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATTTGAGAGTTTTCAGCTaGACAAGCTCCAGGAATCGC +
Preference number: 4 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHLRVFS*TSSRNR
Trigger: GCGATTCCTGGAGCTTGTGCAGCTGAAAACTCTCAA...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTAAAGCTCCACGCAGGTaGCAATCATTCTTATCATTG +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTKAPRR*QSFLSL
Trigger: CAATGATAAGAATGATTGGCACCTGCGTGGAGCTTT...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACAGCACCATTATCAGATaGTATGGCCAAGTAGTGGGA +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYSTIIR*YGQVVG
Trigger: TCCCACTACTTGGCCATAGCATCTGATAATGGTGCT...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTGGAGACTTCATTGTTaGCCTGAACAGCTGCGATTA +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVWRLHC*PEQLRL
Trigger: TAATCGCAGCTGTTCAGGGCAACAATGAAGTCTCCA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATGTCTTGGTCTTGATGTCTCCGTaGCGGACTCCAGATTTGTGC +
Preference number: 4 (lower is better)
Translates to: IGNRFYSRFVVEDGLDVLVLMSP*RTPDLC
Trigger: GCACAAATCTGGAGTCCGCCACGGAGACATCAAGAC...CAAGACATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACCATTATCAGATGCTATaGCCAAGTAGTGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYHYQML*PSSGSL
Trigger: AAGGCTCCCACTACTTGGCCATAGCATCTGATAATG...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATAAAGTCATGGATGTCTaGGAAATAACTCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: DAHEESHHAYILPHCGWDKVMDV*EITLYR
Trigger: TCTGTAGAGAGTTATTTCTCAGACATCCATGACTTT...ATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp ATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATGTCTTGCCCAGTTCCAACTGGTaGCCATCACATTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: IGNRFYSRFVVEDGLDVLPSSNW*PSHSLS
Trigger: AGACAGAGAATGTGATGGTCACCAGTTGGAACTGGG...CAAGACATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR TCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTCAAAGAAATAGTTaGAATCCGCTGGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHCQRNS*NPLGCP
Trigger: AGGACAACCCAGCGGATTTCAACTATTTCTTTGACA...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTGTCCACAGAGGTTGTaGATAATGTTGCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVCPQRL*IMLPKS
Trigger: AGATTTGGGCAACATTATTCACAACCTCTGTGGACA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTGATTTGATTTCATCATaGAGTCCTTCAGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTDLISS*SPSVPE
Trigger: TTCTGGCACTGAAGGACTTCATGATGAAATCAAATC...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGACCAGGCCTTCCCGGTaGTTGGCTCGAGCGACTTTA +
Preference number: 4 (lower is better)
Translates to: SKVCLLAIGFIPDLLWRTTRPSR*LARATL
Trigger: TAAAGTCGCTCGAGCCAAGCACCGGGAAGGCCTGGT...CGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR GCA 90 bp GTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATCTCAGACGCCTTTTCTaGTGCTTTCTGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VFIGNRFYSRFVVEDGLDLRRLF*CFLEGE
Trigger: CTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCTGAG...ATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR GCA 90 bp GTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATCCGGAACAGCATGGCTaGTTTCTCAGACGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VFIGNRFYSRFVVEDGLDPEQHG*FLRRLF
Trigger: GAAAAGGCGTCTGAGAAAGCAGCCATGCTGTTCCGG...ATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR GCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGCATGAAGTCCTTCAGTaGCAGAAGTTTATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVHEVLQ*QKFIFL
Trigger: GAGGAAGATAAACTTCTGGCACTGAAGGACTTCATG...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp AGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGCAGTTCTGGGCGGAGTaGAGCCTGATTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SVFIGNRFYSRFVVEDGLQFWAE*SLIFSS
Trigger: GGAACTGAAAATCAGGCTCCACTCCGCCCAGAACTG...CAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp AGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGCCGAAAAGATGTCCATaGCTCTCTTCAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SVFIGNRFYSRFVVEDGLPKRCP*LSSALP
Trigger: GGGGAGAGCTGAAGAGAGCCATGGACATCTTTTCGG...CAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTCAATTCCAAGAAGCTaGACAGCACCATTATCAGAT +
Preference number: 4 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESSIPRS*TAPLSD
Trigger: ATCTGATAATGGTGCTGTCCAGCTTCTTGGAATTGA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCAATTCCAAGAAGCTaGACAGCACCATTATCAGAT +
Preference number: 4 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTSIPRS*TAPLSD
Trigger: ATCTGATAATGGTGCTGTCCAGCTTCTTGGAATTGA...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCAAAGTCATGGATGTCTaGGAAATAACTCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: APRLCYLASSSEMHMKKVKVMDV*EITLYR
Trigger: TCTGTAGAGAGTTATTTCTCAGACATCCATGACTTT...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTTGTCCACAGAGGTTGTaGATAATGTTGCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCCPQRL*IMLPKS
Trigger: AGATTTGGGCAACATTATTCACAACCTCTGTGGACA...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACAGCTTTGGCTCGATTTaGTTTCATCATGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHSFGSI*FHHEVL
Trigger: AAGGACTTCATGATGAAATCAAATCGAGCCAAAGCT...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTCCAGATCTTCACTGTaGCATCATTTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVSRSSL*HHLNML
Trigger: CAACATGTTCAAATGATGGCACAGTGAAGATCTGGA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACTCCAGATCTTCACTGTaGCATCATTTGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYSRSSL*HHLNML
Trigger: CAACATGTTCAAATGATGGCACAGTGAAGATCTGGA...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CCA 90 bp TCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGACTGCCGGAACAGCATaGCTGCTTTCTCAGACGCCT +
Preference number: 4 (lower is better)
Translates to: SKVCLLAIGFIPDLLWRTTAGTA*LLSQTP
Trigger: AGGCGTCTGAGAAAGCAGCCATGCTGTTCCGGCAGT...CGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp GTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGCCAGATTTGTGCGCTTaGTCCACGGCCGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: VSKVCLLAIGFIPDLLWRPDLCA*STAVRI
Trigger: GATCCTGACGGCCGTGGACCAAGCGCACAAATCTGG...CCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp AGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGTGTACTCTAACTCGGTaGCGAACATCCCACCGTCAA +
Preference number: 4 (lower is better)
Translates to: SVFIGNRFYSRFVVEDGLCTLTR*RTSHRQ
Trigger: TTGACGGTGGGATGTTCGCCACCGAGTTAGAGTACA...CAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGCACGTTTCTCATCTaGTTCTTGTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEESTFLI*FLFGFN
Trigger: GTTAAAACCAAACAAGAACCAGATGAGAAACGTGCT...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
3UTR CAA 72 bp GTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTaGTGGAGGACGGACTGGATGTCTTGCCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: VCLLAIGFIPDL*WRTDWMSCLSS
Trigger: GGATGACAGGCAAGACATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGAGTTACCAAGTCTCTaGTACTGCGATCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCELPSL*YCDLQF
Trigger: AAATTGAAGATCGCAGTATCAGAGACTTGGTAACTC...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR TCA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGATTTGATTTCATCATaGAGTCCTTCAGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FFRDAHEESHHAYILPHCDLISS*SPSVPE
Trigger: TTCTGGCACTGAAGGACTTCATGATGAAATCAAATC...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GGTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGTCTGGGAAGGAGCGATaGCAGCCAGCTGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: GIKSVFIGNRFYSRFVVESGKER*QPADFP
Trigger: TGGGAAATCAGCTGGCTGGCATCGCTCCTTCCCAGA...CTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR GCA 90 bp GTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATCGTGGGATCCTGAATTaGAAAGACCTTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: VFIGNRFYSRFVVEDGLDRGILN*KDLHNH
Trigger: GTGGTTGTGAAGGTCTTTGCAATTCAGGATCCCACG...ATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACAGCACGTTTCTCATCTaGTTCTTGTTTGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: QFFRDAHEESHHAYILPHSTFLI*FLFGFN
Trigger: GTTAAAACCAAACAAGAACCAGATGAGAAACGTGCT...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR GCA 90 bp GTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGAGACGCCTTTTCTGCTaGTTTCTGGAAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VSKVCLLAIGFIPDLLWRRRLFC*FLEGEA
Trigger: TGCCTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCT...CCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
3UTR CAA 72 bp AAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTaGTTGTGGAGGACGGACTGGATGTCTTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KVCLLAIGFIPD*LWRTDWMSCLS
Trigger: TGACAGGCAAGACATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR TCA 90 bp AGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGTGTCAAAGAAATAGTTaGAATCCGCTGGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SVFIGNRFYSRFVVEDGLCQRNS*NPLGCP
Trigger: AGGACAACCCAGCGGATTTCAACTATTTCTTTGACA...CAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp GGTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGTTTTCTGCTGCTTTCTaGAAGGGGAGGCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GIKSVFIGNRFYSRFVVEFSAAF*KGRQFW
Trigger: CCAGAACTGCCTCCCCTTCCAGAAAGCAGCAGAAAA...CTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR TCA 90 bp GTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATAAAGTCATGGATGTCTaGGAAATAACTCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: VFIGNRFYSRFVVEDGLDKVMDV*EITLYR
Trigger: TCTGTAGAGAGTTATTTCTCAGACATCCATGACTTT...ATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CCA 90 bp GGTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGATAGTTGAAATCCGCTaGGTTGTCCTCGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: GIKSVFIGNRFYSRFVVEIVEIR*VVLGKI
Trigger: TATCTTCCCGAGGACAACCCAGCGGATTTCAACTAT...CTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS CCA 90 bp AGAGGCGCCGGATGCGAGCTCTGGAGGGATGACAGTGACTGGAGATaGGCAACTGGAACCTCATGTCCCAACACGCCATGGCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: RGAGCELWRDDSDWR*ATGTSCPNTPWHRC
Trigger: GCAGCGGTGCCATGGCGTGTTGGGACATGAGGTTCCAGTTGCCCATCTCCAGTCACTGTCATCCCTCCAGAGCTCGCATCCGGCGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp CGATTACCCAGGACTGGTACAGGGGGTGCATGGAGAGGCGCCGGATaGGAGCTCTGGAGGGATGACAGTGACTGGAGATGGGCAACTGGA +
Preference number: 5 (lower is better)
Translates to: RLPRTGTGGAWRGAG*ELWRDDSDWRWATG
Trigger: TCCAGTTGCCCATCTCCAGTCACTGTCATCCCTCCAGAGCTCGCATCCGGCGCCTCTCCATGCACCCCCTGTACCAGTCCTGGGTAATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp GGACGCTGTGCGGTGAAGGCTGTAATTCAGACAGTGGCGGTGCGCTaGTGGCCCAGAGAGTCAGTCTCCTGTCGCCAGTTTCCATGTCCC +
Preference number: 5 (lower is better)
Translates to: GRCAVKAVIQTVAVR*WPRESVSCRQFPCP
Trigger: GGGACATGGAAACTGGCGACAGGAGACTGACTCTCTGGGCCAGCAGCGCACCGCCACTGTCTGAATTACAGCCTTCACCGCACAGCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp GTGATGCGATCCAGAAGGATCTCGACGCTCAGTCTGGGGGCCAGATaGAGGATGAGCTCCAAGGCGGCCAGTTTGGAGTCGCAGGACTTC +
Preference number: 5 (lower is better)
Translates to: VMRSRRISTLSLGAR*RMSSKAASLESQDF
Trigger: GAAGTCCTGCGACTCCAAACTGGCCGCCTTGGAGCTCATCCTGCATCTGGCCCCCAGACTGAGCGTCGAGATCCTTCTGGATCGCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp CCAGGTGGAGGTGGCTTGCTCTCCCACTCGGCATTCTCCATCATCTaGTTGGCTATGCGCTCCGCGTTGCACTGCTCCCTCTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: PGGGGLLSHSAFSII*LAMRSALHCSLFCC
Trigger: ACAGCAGAAGAGGGAGCAGTGCAACGCGGAGCGCATAGCCAAGCAGATGATGGAGAATGCCGAGTGGGAGAGCAAGCCACCTCCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp TGGCGGACTCCAGATTTGTGCGCTTGGTCCACGGCCGTCAGGATCTaGAAGGCGATCCAGCGCTTCTCGATGTTGTTTAGGAACGGGCGG +
Preference number: 5 (lower is better)
Translates to: WRTPDLCAWSTAVRI*KAIQRFSMLFRNGR
Trigger: CCGCCCGTTCCTAAACAACATCGAGAAGCGCTGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CCA 90 bp AGGACTGGTACAGGGGGTGCATGGAGAGGCGCCGGATGCGAGCTCTaGAGGGATGACAGTGACTGGAGATGGGCAACTGGAACCTCATGT +
Preference number: 5 (lower is better)
Translates to: RTGTGGAWRGAGCEL*RDDSDWRWATGTSC
Trigger: ACATGAGGTTCCAGTTGCCCATCTCCAGTCACTGTCATCCCTCCAGAGCTCGCATCCGGCGCCTCTCCATGCACCCCCTGTACCAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp CGCTGTGCGGTGAAGGCTGTAATTCAGACAGTGGCGGTGCGCTGCTaGCCCAGAGAGTCAGTCTCCTGTCGCCAGTTTCCATGTCCCACA +
Preference number: 5 (lower is better)
Translates to: RCAVKAVIQTVAVRC*PRESVSCRQFPCPT
Trigger: TGTGGGACATGGAAACTGGCGACAGGAGACTGACTCTCTGGGCCAGCAGCGCACCGCCACTGTCTGAATTACAGCCTTCACCGCACAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp TTCTCTGTCTTGATGTCTCCGTGGCGGACTCCAGATTTGTGCGCTTaGTCCACGGCCGTCAGGATCTGGAAGGCGATCCAGCGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: FSVLMSPWRTPDLCA*STAVRIWKAIQRFS
Trigger: CGAGAAGCGCTGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CCA 90 bp GGTCGACAAGCGGGGTTGAGGGGTCTCTCATGTACTCTAACTCGGTaGCGAACATCCCACCGTCAACGAAGCGCTCGGGAGCTATGTAGC +
Preference number: 5 (lower is better)
Translates to: GRQAGLRGLSCTLTR*RTSHRQRSARELCS
Trigger: GCTACATAGCTCCCGAGCGCTTCGTTGACGGTGGGATGTTCGCCACCGAGTTAGAGTACATGAGAGACCCCTCAACCCCGCTTGTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000191268.7
CDS CCA 90 bp CACGCCATGGCACCGCTGCTCGTGCCTATGCACAGCCAGCACTGGTaGATGTCCACGGCAAAGGAAGTGATGAGGCCTGACTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: HAMAPLLVPMHSQHW*MSTAKEVMRPDFRS
Trigger: TGACCTAAAGTCAGGCCTCATCACTTCCTTTGCCGTGGACATCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCGGTGCCATGGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp CAACACGCCATGGCACCGCTGCTCGTGCCTATGCACAGCCAGCACTaGTGGATGTCCACGGCAAAGGAAGTGATGAGGCCTGACTTTAGG +
Preference number: 5 (lower is better)
Translates to: QHAMAPLLVPMHSQH*WMSTAKEVMRPDFR
Trigger: CCTAAAGTCAGGCCTCATCACTTCCTTTGCCGTGGACATCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCGGTGCCATGGCGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp AGTGACTGGAGATGGGCAACTGGAACCTCATGTCCCAACACGCCATaGCACCGCTGCTCGTGCCTATGCACAGCCAGCACTGGTGGATGT +
Preference number: 5 (lower is better)
Translates to: SDWRWATGTSCPNTP*HRCSCLCTASTGGC
Trigger: ACATCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCGGTGCCATGGCGTGTTGGGACATGAGGTTCCAGTTGCCCATCTCCAGTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp CACATACTGCCGGAACAGCATGGCTGCTTTCTCAGACGCCTTTTCTaGTGCTTTCTGGAAGGGGAGGCAGTTCTGGGCGGAGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: HILPEQHGCFLRRLF*CFLEGEAVLGGVEP
Trigger: AGGCTCCACTCCGCCCAGAACTGCCTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCTGAGAAAGCAGCCATGCTGTTCCGGCAGTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS GCA 90 bp ATCACATTCTCTGTCTTGATGTCTCCGTGGCGGACTCCAGATTTGTaGGCTTGGTCCACGGCCGTCAGGATCTGGAAGGCGATCCAGCGC +
Preference number: 5 (lower is better)
Translates to: ITFSVLMSPWRTPDL*AWSTAVRIWKAIQR
Trigger: GCGCTGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAATGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAATCTCAGGGAAGGCGTaGCCTCGCTGCTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPISGKA*PRCCFR
Trigger: CCTGAAGCAGCAGCGAGGCAACGCCTTCCCTGAGAT...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATATCTCAGGGAAGGCGTaGCCTCGCTGCTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHISGKA*PRCCFR
Trigger: CCTGAAGCAGCAGCGAGGCAACGCCTTCCCTGAGAT...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp ACACAGATACCAGCAGAGGACTCAGAGCGAGGTGGCTTCCCAGGCTaGACAACCTCATGGTCACTGGTTTTAGGCAGGGCCTGTGGGATA +
Preference number: 5 (lower is better)
Translates to: TQIPAEDSERGGFPG*TTSWSLVLGRACGI
Trigger: TATCCCACAGGCCCTGCCTAAAACCAGTGACCATGAGGTTGTTCAGCCTGGGAAGCCACCTCGCTCTGAGTCCTCTGCTGGTATCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp TCCAACCAGAGAGCCATTCACCGTGGCATAGGCAAGAACGGACTGTaGCCCGGAGTTGAAGTGATGCATGTCCACCACACAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: SNQRAIHRGIGKNGL*PGVEVMHVHHTAIF
Trigger: GAAGATGGCTGTGTGGTGGACATGCATCACTTCAACTCCGGGGCACAGTCCGTTCTTGCCTATGCCACGGTGAATGGCTCTCTGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp CAGTTCCAACTGGTGACCATCACATTCTCTGTCTTGATGTCTCCGTaGCGGACTCCAGATTTGTGCGCTTGGTCCACGGCCGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: QFQLVTITFSVLMSP*RTPDLCAWSTAVRI
Trigger: GATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAATGTGATGGTCACCAGTTGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CCA 90 bp CAGTCATCCCCTGTGAGAGCAACTTCTTCAGAAGTTGCGCTATGGTaGGGTCCTCAGGTGGAGGGCAGTCGAGAAGAGAGCCATTTCGCT +
Preference number: 5 (lower is better)
Translates to: QSSPVRATSSEVALW*GPQVEGSREESHFA
Trigger: AGCGAAATGGCTCTCTTCTCGACTGCCCTCCACCTGAGGACCCCACCATAGCGCAACTTCTGAAGAAGTTGCTCTCACAGGGGATGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 90 bp TGTCTCCCAGTGATGCCTAAGGCGGCCAAGTCGATTACACCTTTCTaGCTGCTGTCGTGGAGGTGGCTCTGGTCTACCGCATTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: CLPVMPKAAKSITPF*LLSWRWLWSTALAL
Trigger: CAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAATCGACTTGGCCGCCTTAGGCATCACTGGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTGGCGGACTCCAGATTaGTGCGCTTGGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTWRTPD*CAWSTA
Trigger: GGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCA...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATTCCAAGGCGGCCAGTTaGGAGTCGCAGGACTTCAGT +
Preference number: 5 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHSKAAS*ESQDFS
Trigger: ACTGAAGTCCTGCGACTCCAAACTGGCCGCCTTGGA...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAATGCTGGAGCAGGGGCTaGAGGATAGAGGAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHECWSRG*RIEELC
Trigger: GCAGAGCTCCTCTATCCTCAAGCCCCTGCTCCAGCA...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp AGGCGATCCAGCGCTTCTCGATGTTGTTTAGGAACGGGCGGGTACTaGTGCGATCGTAGAGGTTGTCTCTCACATACTGCCGGAACAGCA +
Preference number: 5 (lower is better)
Translates to: RRSSASRCCLGTGGY*CDRRGCLSHTAGTA
Trigger: TGCTGTTCCGGCAGTATGTGAGAGACAACCTCTACGATCGCATCAGTACCCGCCCGTTCCTAAACAACATCGAGAAGCGCTGGATCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS TCA 90 bp CCATCAGCGTCTGTTTCACGATATTCTCAGGGTCGCTTAGCAACGTaGCCACCTTCTGCTGGACCATCTCATGCAAGGCCTGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: PSASVSRYSQGRLAT*PPSAGPSHARPGAL
Trigger: CAGAGCTCCAGGCCTTGCATGAGATGGTCCAGCAGAAGGTGGTCACGTTGCTAAGCGACCCTGAGAATATCGTGAAACAGACGCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp GAACGTCGTTGGCCTTCTGGCGTCCGAAGAAGACGCACAAGCGTGTaGTCCCACTCTCCATCAGCGTCTGTTTCACGATATTCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ERRWPSGVRRRRTSV*SHSPSASVSRYSQG
Trigger: ACCCTGAGAATATCGTGAAACAGACGCTGATGGAGAGTGGGATCACACGCTTGTGCGTCTTCTTCGGACGCCAGAAGGCCAACGACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp AGCCATTCACCGTGGCATAGGCAAGAACGGACTGTGCCCCGGAGTTaGAGTGATGCATGTCCACCACACAGCCATCTTCCTTCTGATCCA +
Preference number: 5 (lower is better)
Translates to: SHSPWHRQERTVPRS*SDACPPHSHLPSDP
Trigger: TGGATCAGAAGGAAGATGGCTGTGTGGTGGACATGCATCACTTCAACTCCGGGGCACAGTCCGTTCTTGCCTATGCCACGGTGAATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp GGACCTCTCTGGGGAAACCAAGTCCCAGAACCTTATTTTCATGTCTaGGCCAGCGGTCAGCAGGATAGGGTTTCCATCTGCAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GPLWGNQVPEPYFHV*ASGQQDRVSICRAA
Trigger: TGCAGCCCTGCAGATGGAAACCCTATCCTGCTGACCGCTGGCTCAGACATGAAAATAAGGTTCTGGGACTTGGTTTCCCCAGAGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp TCCTCTTCTTCAGTCATCCCCTGTGAGAGCAACTTCTTCAGAAGTTaGGCTATGGTGGGGTCCTCAGGTGGAGGGCAGTCGAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: SSSSVIPCESNFFRS*AMVGSSGGGQSRRE
Trigger: CTCTCTTCTCGACTGCCCTCCACCTGAGGACCCCACCATAGCGCAACTTCTGAAGAAGTTGCTCTCACAGGGGATGACTGAAGAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 90 bp AGCGTCATCCTGGGCCAGGTGGGCTATGCCGGGGAGAATATACTCTaGATAGATATTGACATCGTTGCGAGGAACCTCTTGGACAAGGGC +
Preference number: 5 (lower is better)
Translates to: SVILGQVGYAGENIL*IDIDIVARNLLDKG
Trigger: GCCCTTGTCCAAGAGGTTCCTCGCAACGATGTCAATATCTATCCAGAGTATATTCTCCCCGGCATAGCCCACCTGGCCCAGGATGACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp GGAGGGCAGTCGAGAAGAGAGCCATTTCGCTTCTTCTGGCGCATGTaGAGATGTCTGAACAAGCTGGCGATGTCTTTCGACCTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GGQSRREPFRFFWRM*RCLNKLAMSFDLRA
Trigger: TGCTCTGAGGTCGAAAGACATCGCCAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAAGCGAAATGGCTCTCTTCTCGACTGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 90 bp TCCTCAGGTGGAGGGCAGTCGAGAAGAGAGCCATTTCGCTTCTTCTaGCGCATGTGGAGATGTCTGAACAAGCTGGCGATGTCTTTCGAC +
Preference number: 5 (lower is better)
Translates to: SSGGGQSRREPFRFF*RMWRCLNKLAMSFD
Trigger: GTCGAAAGACATCGCCAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAAGCGAAATGGCTCTCTTCTCGACTGCCCTCCACCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 90 bp CTTCAGTCATCCCCTGTGAGAGCAACTTCTTCAGAAGTTGCGCTATaGTGGGGTCCTCAGGTGGAGGGCAGTCGAGAAGAGAGCCATTTC +
Preference number: 5 (lower is better)
Translates to: LQSSPVRATSSEVAL*WGPQVEGSREESHF
Trigger: GAAATGGCTCTCTTCTCGACTGCCCTCCACCTGAGGACCCCACCATAGCGCAACTTCTGAAGAAGTTGCTCTCACAGGGGATGACTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 90 bp TGGCCCAGAGAGTCAGTCTCCTGTCGCCAGTTTCCATGTCCCACATaGAGACTTCATTGTTGCCCTGAACAGCTGCGATTACCCAGGACT +
Preference number: 5 (lower is better)
Translates to: WPRESVSCRQFPCPT*RLHCCPEQLRLPRT
Trigger: AGTCCTGGGTAATCGCAGCTGTTCAGGGCAACAATGAAGTCTCCATGTGGGACATGGAAACTGGCGACAGGAGACTGACTCTCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGGCGGACTCCAGATTaGTGCGCTTGGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: QFFRDAHEESHHAYILPHWRTPD*CAWSTA
Trigger: GGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCA...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAACAAGGGCAAGGACTTaGGTGAGTGTCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPTRART*VSVLRA
Trigger: AGCCCTGAGGACACTCACCAAAGTCCTTGCCCTTGT...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp GGGCCAGGTGGGCTATGCCGGGGAGAATATACTCTGGATAGATATTaGCATCGTTGCGAGGAACCTCTTGGACAAGGGCAAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: GPGGLCRGEYTLDRY*HRCEEPLGQGQGLW
Trigger: CCAAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCAACGATGTCAATATCTATCCAGAGTATATTCTCCCCGGCATAGCCCACCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp TTGAGGAAAGTGATCATGTGGGACAAGAGAACGTCGTTGGCCTTCTaGCGTCCGAAGAAGACGCACAAGCGTGTGATCCCACTCTCCATC +
Preference number: 5 (lower is better)
Translates to: LRKVIMWDKRTSLAF*RPKKTHKRVIPLSI
Trigger: GATGGAGAGTGGGATCACACGCTTGTGCGTCTTCTTCGGACGCCAGAAGGCCAACGACGTTCTCTTGTCCCACATGATCACTTTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp ATGCCTAAGGCGGCCAAGTCGATTACACCTTTCTGGCTGCTGTCGTaGAGGTGGCTCTGGTCTACCGCATTAGCTTTGGCTCGATTTGAT +
Preference number: 5 (lower is better)
Translates to: MPKAAKSITPFWLLS*RWLWSTALALARFD
Trigger: ATCAAATCGAGCCAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAATCGACTTGGCCGCCTTAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAATCCAAGGCGGCCAGTTaGGAGTCGCAGGACTTCAGT +
Preference number: 5 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEESKAAS*ESQDFS
Trigger: ACTGAAGTCCTGCGACTCCAAACTGGCCGCCTTGGA...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTGCTGGAGCAGGGGCTaGAGGATAGAGGAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVCWSRG*RIEELC
Trigger: GCAGAGCTCCTCTATCCTCAAGCCCCTGCTCCAGCA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp AAGGCGGCCAAGTCGATTACACCTTTCTGGCTGCTGTCGTGGAGGTaGCTCTGGTCTACCGCATTAGCTTTGGCTCGATTTGATTTCATC +
Preference number: 5 (lower is better)
Translates to: KAAKSITPFWLLSWR*LWSTALALARFDFI
Trigger: GATGAAATCAAATCGAGCCAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAATCGACTTGGCCGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGTCCAGATTTGTGCGCTaGGTCCACGGCCGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVSRFVR*VHGRQD
Trigger: ATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGA...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAGTTGCGAGGAACCTCTaGGACAAGGGCAAGGACTTT +
Preference number: 5 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDAVARNL*DKGKDF
Trigger: AAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCAAC...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACAACTTCTTCAGAAGTaGCGCTATGGTGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDAQLLQK*RYGGVL
Trigger: GAGGACCCCACCATAGCGCAACTTCTGAAGAAGTTG...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAACAACTTCTTCAGAAGTaGCGCTATGGTGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHEQLLQK*RYGGVL
Trigger: GAGGACCCCACCATAGCGCAACTTCTGAAGAAGTTG...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATCAAAACGTTAGCGTCTaGACTCGTCCTCCAATTCGG +
Preference number: 5 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHQNVSV*TRPPIR
Trigger: CCGAATTGGAGGACGAGTCAAGACGCTAACGTTTTG...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp CCACGCAGGTGCCAATCATTCTTATCATTGAGGAAAGTGATCATGTaGGACAAGAGAACGTCGTTGGCCTTCTGGCGTCCGAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: PRRCQSFLSLRKVIM*DKRTSLAFWRPKKT
Trigger: CGTCTTCTTCGGACGCCAGAAGGCCAACGACGTTCTCTTGTCCCACATGATCACTTTCCTCAATGATAAGAATGATTGGCACCTGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCAACGTGGGATCCTGAATaGCAAAGACCTTCACAACCA +
Preference number: 5 (lower is better)
Translates to: RKSPCLHPSPLWLGFAQPTWDPE*QRPSQP
Trigger: TGGTTGTGAAGGTCTTTGCAATTCAGGATCCCACGT...TGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGATGTAGGCATGGTGACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAATCACATTCTCTGTCTaGATGTCTCCGTGGCGGACT +
Preference number: 5 (lower is better)
Translates to: SKRSQVVLSGQFFRDAHEITFSV*MSPWRT
Trigger: AGTCCGCCACGGAGACATCAAGACAGAGAATGTGAT...TTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACACAAGGGCAAGGACTTaGGTGAGTGTCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QFFRDAHEESHHAYILPHTRART*VSVLRA
Trigger: AGCCCTGAGGACACTCACCAAAGTCCTTGCCCTTGT...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCAGTTGCGAGGAACCTCTaGGACAAGGGCAAGGACTTT +
Preference number: 5 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSVARNL*DKGKDF
Trigger: AAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCAAC...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAGGCTCGTTCTCCATGTaGAGAGTTTTCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDAGSFSM*RVFSCT
Trigger: TGTGCAGCTGAAAACTCTCAACATGGAGAACGAGCC...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp ATATGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCAAGACCTGTGGAGACGTaGACAAAGGGACACAGATAC +
Preference number: 5 (lower is better)
Translates to: ICSKRSQVVLSGQFFRDARPVET*TKGHRY
Trigger: GTATCTGTGTCCCTTTGTCAACGTCTCCACAGGTCT...TGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp TGTTCATCAGAGACTCTGATGCGATTCACAGCAGATTTGTGCTCATaGAGATGTGCAACTAGCAGCCCTTTAGGACGCCACCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: CSSETLMRFTADLCS*RCATSSPLGRHPGG
Trigger: TCCACCTGGGTGGCGTCCTAAAGGGCTGCTAGTTGCACATCTTCATGAGCACAAATCTGCTGTGAATCGCATCAGAGTCTCTGATGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp CTGACTTTAGGTCATGCTTTAATGTCCACGCGTTGCTTGAAGACCTaGGATCCCATCCAACCAGAGAGCCATTCACCGTGGCATAGGCAA +
Preference number: 5 (lower is better)
Translates to: LTLGHALMSTRCLKT*DPIQPESHSPWHRQ
Trigger: TTGCCTATGCCACGGTGAATGGCTCTCTGGTTGGATGGGATCTCAGGTCTTCAAGCAACGCGTGGACATTAAAGCATGACCTAAAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp TGGATGTCCACGGCAAAGGAAGTGATGAGGCCTGACTTTAGGTCATaGTTTAATGTCCACGCGTTGCTTGAAGACCTGAGATCCCATCCA +
Preference number: 5 (lower is better)
Translates to: WMSTAKEVMRPDFRS*FNVHALLEDLRSHP
Trigger: TGGATGGGATCTCAGGTCTTCAAGCAACGCGTGGACATTAAAGCATGACCTAAAGTCAGGCCTCATCACTTCCTTTGCCGTGGACATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 90 bp GCATGTCCTCCTTCTCGAGGTGTCAAAGAAATAGTTGAAATCCGCTaGGTTGTCCTCGGGAAGATACGTGGGCTTAAAACTGGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: ACPPSRGVKEIVEIR*VVLGKIRGLKTGEV
Trigger: GACTTCGCCAGTTTTAAGCCCACGTATCTTCCCGAGGACAACCCAGCGGATTTCAACTATTTCTTTGACACCTCGAGAAGGAGGACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000191268.7
CDS CCA 90 bp CAGGACAACCAGACCACTGGCCCTGGACTCCCCTTCTGCTTTTTCTaGCAAATCATGTCCACAGAGGTTGTGAATAATGTTGCCCAAATC +
Preference number: 5 (lower is better)
Translates to: QDNQTTGPGLPFCFF*QIMSTEVVNNVAQI
Trigger: GATTTGGGCAACATTATTCACAACCTCTGTGGACATGATTTGCCAGAAAAAGCAGAAGGGGAGTCCAGGGCCAGTGGTCTGGTTGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAATGCAGGTCAGGGCATaGAGAGCTTTCACGATGACA +
Preference number: 5 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEEMQVRA*RAFTMT
Trigger: TGTCATCGTGAAAGCTCTCAATGCCCTGACCTGCAT...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp ATCCTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTATGCAGGTCAGGGCATaGAGAGCTTTCACGATGACA +
Preference number: 5 (lower is better)
Translates to: ILPHCGWDLLSHETVTVTMQVRA*RAFTMT
Trigger: TGTCATCGTGAAAGCTCTCAATGCCCTGACCTGCAT...AGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCTCACAGGCTTCTTACTaGGGATGTGAGCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: APRLCYLASSSEMHMKKVSQASY*GCELLL
Trigger: CAGAAGCAGCTCACATCCCAAGTAAGAAGCCTGTGA...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAATCACAGGCTTCTTACTaGGGATGTGAGCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEESQASY*GCELLL
Trigger: CAGAAGCAGCTCACATCCCAAGTAAGAAGCCTGTGA...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp CCGAGTGCTTCCCAGGCTCTTATCATACTCAAAGTCATGGATGTCTaGGAAATAACTCTCTACAGACAGGATCTGGGAAGGAGCGATGCC +
Preference number: 5 (lower is better)
Translates to: PSASQALIILKVMDV*EITLYRQDLGRSDA
Trigger: GGCATCGCTCCTTCCCAGATCCTGTCTGTAGAGAGTTATTTCTCAGACATCCATGACTTTGAGTATGATAAGAGCCTGGGAAGCACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS TCA 90 bp CGAGAAGAGAGCCATTTCGCTTCTTCTGGCGCATGTGGAGATGTCTaGACAAGCTGGCGATGTCTTTCGACCTCAGAGCATAGTCAAATA +
Preference number: 5 (lower is better)
Translates to: REESHFASSGACGDV*TSWRCLSTSEHSQI
Trigger: TATTTGACTATGCTCTGAGGTCGAAAGACATCGCCAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAAGCGAAATGGCTCTCTTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 90 bp TACGTGAGAATAGACCGCGTTGTGGTGGTCTTCCCCTCCATCTTCTaGCTGTTCCAGATCTTCACTGTGCCATCATTTGAACATGTTGCA +
Preference number: 5 (lower is better)
Translates to: YVRIDRVVVVFPSIF*LFQIFTVPSFEHVA
Trigger: TGCAACATGTTCAAATGATGGCACAGTGAAGATCTGGAACAGCCAGAAGATGGAGGGGAAGACCACCACAACGCGGTCTATTCTCACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAACGTGGGATCCTGAATaGCAAAGACCTTCACAACCA +
Preference number: 5 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEETWDPE*QRPSQP
Trigger: TGGTTGTGAAGGTCTTTGCAATTCAGGATCCCACGT...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp ATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGGACTGGATGTCTTGTCCAGATTTGTGCGCTaGGTCCACGGCCGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: IGNRFYSRFVVEDGLDVLSRFVR*VHGRQD
Trigger: ATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGA...CAAGACATCCAGTCCGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CAA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGATCACATTCTCTGTCTaGATGTCTCCGTGGCGGACT +
Preference number: 5 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVITFSV*MSPWRT
Trigger: AGTCCGCCACGGAGACATCAAGACAGAGAATGTGAT...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGAGACCTGTGGAGACGTaGACAAAGGGACACAGATAC +
Preference number: 5 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVRPVET*TKGHRY
Trigger: GTATCTGTGTCCCTTTGTCAACGTCTCCACAGGTCT...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp GTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACCAAAACGTTAGCGTCTaGACTCGTCCTCCAATTCGG +
Preference number: 5 (lower is better)
Translates to: VLSGQFFRDAHEESHHAYQNVSV*TRPPIR
Trigger: CCGAATTGGAGGACGAGTCAAGACGCTAACGTTTTG...GTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTTTTAATGTCCACGCGTaGCTTGAAGACCTGAGATCC +
Preference number: 5 (lower is better)
Translates to: RSQVVLSGQFFRDAHEESFNVHA*LEDLRS
Trigger: GGATCTCAGGTCTTCAAGCAACGCGTGGACATTAAA...ACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 90 bp GTCGTGGAGGTGGCTCTGGTCTACCGCATTAGCTTTGGCTCGATTTaGTTTCATCATGAAGTCCTTCAGTGCCAGAAGTTTATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VVEVALVYRISFGSI*FHHEVLQCQKFIFL
Trigger: GAGGAAGATAAACTTCTGGCACTGAAGGACTTCATGATGAAATCAAATCGAGCCAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS TCA 90 bp GTCACTGGTTTTAGGCAGGGCCTGTGGGATATTCGGTGGCTCCAATaGCCCAAACATGCTTTTCCACTCTTCATTTACATTGGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: VTGFRQGLWDIRWLQ*PKHAFPLFIYIGVL
Trigger: CAAGACTCCAATGTAAATGAAGAGTGGAAAAGCATGTTTGGGTCATTGGAGCCACCGAATATCCCACAGGCCCTGCCTAAAACCAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGTGGCGGACTCCAGATTaGTGCGCTTGGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SKVCLLAIGFIPDLLWRTWRTPD*CAWSTA
Trigger: GGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCA...CGTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CAA 90 bp TTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGGCTCGTTCTCCATGTaGAGAGTTTTCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: FFRDAHEESHHAYILPHCGSFSM*RVFSCT
Trigger: TGTGCAGCTGAAAACTCTCAACATGGAGAACGAGCC...ACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTTTAATGTCCACGCGTaGCTTGAAGACCTGAGATCC +
Preference number: 5 (lower is better)
Translates to: QFFRDAHEESHHAYILPHFNVHA*LEDLRS
Trigger: GGATCTCAGGTCTTCAAGCAACGCGTGGACATTAAA...GTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAACTGCGATCTTCAATTTaGTTTAGCACTTGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEELRSSI*FSTCSG
Trigger: CCCTGAACAAGTGCTAAACAAAATTGAAGATCGCAG...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCACTGCGATCTTCAATTTaGTTTAGCACTTGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSLRSSI*FSTCSG
Trigger: CCCTGAACAAGTGCTAAACAAAATTGAAGATCGCAG...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TGCAGCAAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATCACTCTTCATTTACATaGGAGTCTTGTTTCACATGT +
Preference number: 5 (lower is better)
Translates to: CSKRSQVVLSGQFFRDAHHSSFT*ESCFTC
Trigger: ACATGTGAAACAAGACTCCAATGTAAATGAAGAGTG...ATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTTGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 90 bp AATAATGTTGCCCAAATCTTTCCGTATAACCAAAATCCGCTCATCTaGAGAGAGAAAGGTTTCCTTGGCGAACTGGGCCATGTAAGGCTG +
Preference number: 5 (lower is better)
Translates to: NNVAQIFPYNQNPLI*REKGFLGELGHVRL
Trigger: CAGCCTTACATGGCCCAGTTCGCCAAGGAAACCTTTCTCTCTGCAGATGAGCGGATTTTGGTTATACGGAAAGATTTGGGCAACATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CTTCCCCACTGTGGCTGGGATTTGCTCAGCCATGAAACAGTAACAGTCACTTCACAATCATTCTTATCATaGAGGAAAGTGATCATGTGG +
Preference number: 5 (lower is better)
Translates to: LPHCGWDLLSHETVTVTSQSFLS*RKVIMW
Trigger: CCACATGATCACTTTCCTCAATGATAAGAATGATTG...TGAAGTGACTGTTACTGTTTCATGGCTGAGCAAATCCCAGCCACAGTGGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp GCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCCAATCATTCTTATCATaGAGGAAAGTGATCATGTGG +
Preference number: 5 (lower is better)
Translates to: APRLCYLASSSEMHMKKVQSFLS*RKVIMW
Trigger: CCACATGATCACTTTCCTCAATGATAAGAATGATTG...GACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp AAGCGCTCCCAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAATTTACATTGGAGTCTaGTTTCACATGTTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: KRSQVVLSGQFFRDAHEEIYIGV*FHMFPS
Trigger: GCTAGGAAACATGTGAAACAAGACTCCAATGTAAAT...TTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTGGGAGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp TCTTCAGAGATGCACATGAAGAAAGTCACCATGCCTACATCCTTCCCCACTGTGCACTCTTCATTTACATaGGAGTCTTGTTTCACATGT +
Preference number: 5 (lower is better)
Translates to: SSEMHMKKVTMPTSFPTVHSSFT*ESCFTC
Trigger: ACATGTGAAACAAGACTCCAATGTAAATGAAGAGTG...CACAGTGGGGAAGGATGTAGGCATGGTGACTTTCTTCATGTGCATCTCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp CAGGTTGTGCTATCTGGCCAGTTCTTCAGAGATGCACATGAAGAAAGTCACCATATTTACATTGGAGTCTaGTTTCACATGTTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: QVVLSGQFFRDAHEESHHIYIGV*FHMFPS
Trigger: GCTAGGAAACATGTGAAACAAGACTCCAATGTAAAT...ATGGTGACTTTCTTCATGTGCATCTCTGAAGAACTGGCCAGATAGCACAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS-3UTR CAA 90 bp GGTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGATCACATTCTCTGTCTaGATGTCTCCGTGGCGGACT +
Preference number: 5 (lower is better)
Translates to: GIKSVFIGNRFYSRFVVEITFSV*MSPWRT
Trigger: AGTCCGCCACGGAGACATCAAGACAGAGAATGTGAT...CTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CAA 90 bp GTATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACGTGGGATCCTGAATaGCAAAGACCTTCACAACCA +
Preference number: 5 (lower is better)
Translates to: VSKVCLLAIGFIPDLLWRTWDPE*QRPSQP
Trigger: TGGTTGTGAAGGTCTTTGCAATTCAGGATCCCACGT...CCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS-3UTR CAA 90 bp ATCAAAAGTGTGTTTATTGGCAATAGGTTTTATTCCAGATTTGTTGTGGAGGACCTGCGATCTTCAATTTaGTTTAGCACTTGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: IKSVFIGNRFYSRFVVEDLRSSI*FSTCSG
Trigger: CCCTGAACAAGTGCTAAACAAAATTGAAGATCGCAG...GTCCTCCACAACAAATCTGGAATAAAACCTATTGCCAATAAACACACTTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188784.2
CDS CCA 72 bp CAGCTGCGATTACCCAGGACTGGTACAGGGGGTGCATaGAGAGGCGCCGGATGCGAGCTCTGGAGGGATGAC +
Preference number: 6 (lower is better)
Translates to: QLRLPRTGTGGA*RGAGCELWRDD
Trigger: GTCATCCCTCCAGAGCTCGCATCCGGCGCCTCTCCATGCACCCCCTGTACCAGTCCTGGGTAATCGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp TGTCCCAACACGCCATGGCACCGCTGCTCGTGCCTATaGACAGCCAGCACTGGTGGATGTCCACGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: CPNTPWHRCSCL*TASTGGCPRQR
Trigger: CCTTTGCCGTGGACATCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCGGTGCCATGGCGTGTTGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp AGGACTGGTACAGGGGGTGCATGGAGAGGCGCCGGATaGGAGCTCTGGAGGGATGACAGTGACTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: RTGTGGAWRGAG*ELWRDDSDWRW
Trigger: CCATCTCCAGTCACTGTCATCCCTCCAGAGCTCGCATCCGGCGCCTCTCCATGCACCCCCTGTACCAGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp ACAGGGGGTGCATGGAGAGGCGCCGGATGCGAGCTCTaGAGGGATGACAGTGACTGGAGATGGGCAACTGGA +
Preference number: 6 (lower is better)
Translates to: TGGAWRGAGCEL*RDDSDWRWATG
Trigger: TCCAGTTGCCCATCTCCAGTCACTGTCATCCCTCCAGAGCTCGCATCCGGCGCCTCTCCATGCACCCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp GGGGCCAGATGCAGGATGAGCTCCAAGGCGGCCAGTTaGGAGTCGCAGGACTTCAGTGTCTGCAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: GARCRMSSKAAS*ESQDFSVCRQD
Trigger: GTCCTGCCTGCAGACACTGAAGTCCTGCGACTCCAAACTGGCCGCCTTGGAGCTCATCCTGCATCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp GGTGGCTTGCTCTCCCACTCGGCATTCTCCATCATCTaGTTGGCTATGCGCTCCGCGTTGCACTGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: GGLLSHSAFSII*LAMRSALHCSL
Trigger: GAGGGAGCAGTGCAACGCGGAGCGCATAGCCAAGCAGATGATGGAGAATGCCGAGTGGGAGAGCAAGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp GCGGGGTTGAGGGGTCTCTCATGTACTCTAACTCGGTaGCGAACATCCCACCGTCAACGAAGCGCTCGGGAG +
Preference number: 6 (lower is better)
Translates to: AGLRGLSCTLTR*RTSHRQRSARE
Trigger: CTCCCGAGCGCTTCGTTGACGGTGGGATGTTCGCCACCGAGTTAGAGTACATGAGAGACCCCTCAACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000191268.7
CDS CCA 72 bp GCACCGCTGCTCGTGCCTATGCACAGCCAGCACTGGTaGATGTCCACGGCAAAGGAAGTGATGAGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: APLLVPMHSQHW*MSTAKEVMRPD
Trigger: GTCAGGCCTCATCACTTCCTTTGCCGTGGACATCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp CTCAGTCTGGGGGCCAGATGCAGGATGAGCTCCAAGGCGGCCAGTTaGGAGTCGCAGGACTTCAGTGTCTGCAGGCAGGACGTTATCACG +
Preference number: 6 (lower is better)
Translates to: LSLGARCRMSSKAAS*ESQDFSVCRQDVIT
Trigger: CGTGATAACGTCCTGCCTGCAGACACTGAAGTCCTGCGACTCCAAACTGGCCGCCTTGGAGCTCATCCTGCATCTGGCCCCCAGACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp TCTGTCTTGATGTCTCCGTGGCGGACTCCAGATTTGTaGGCTTGGTCCACGGCCGTCAGGATCTGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: SVLMSPWRTPDL*AWSTAVRIWKA
Trigger: CGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS GCA 72 bp ACTGGAACCTCATGTCCCAACACGCCATGGCACCGCTaGTCGTGCCTATGCACAGCCAGCACTGGTGGATGT +
Preference number: 6 (lower is better)
Translates to: TGTSCPNTPWHR*SCLCTASTGGC
Trigger: ACATCCACCAGTGCTGGCTGTGCATAGGCACGAGCAGCGGTGCCATGGCGTGTTGGGACATGAGGTTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp GCGGTGAAGGCTGTAATTCAGACAGTGGCGGTGCGCTaGTGGCCCAGAGAGTCAGTCTCCTGTCGCCAGTTT +
Preference number: 6 (lower is better)
Translates to: AVKAVIQTVAVR*WPRESVSCRQF
Trigger: AAACTGGCGACAGGAGACTGACTCTCTGGGCCAGCAGCGCACCGCCACTGTCTGAATTACAGCCTTCACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp TTGATGTCTCCGTGGCGGACTCCAGATTTGTGCGCTTaGTCCACGGCCGTCAGGATCTGGAAGGCGATCCAG +
Preference number: 6 (lower is better)
Translates to: LMSPWRTPDLCA*STAVRIWKAIQ
Trigger: CTGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CCA 72 bp AGATGGGCAACTGGAACCTCATGTCCCAACACGCCATaGCACCGCTGCTCGTGCCTATGCACAGCCAGCACT +
Preference number: 6 (lower is better)
Translates to: RWATGTSCPNTP*HRCSCLCTAST
Trigger: AGTGCTGGCTGTGCATAGGCACGAGCAGCGGTGCCATGGCGTGTTGGGACATGAGGTTCCAGTTGCCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp CTTGATGTCTCCGTGGCGGACTCCAGATTTGTGCGCTaGGTCCACGGCCGTCAGGATCTGGAAGGCGATCCA +
Preference number: 6 (lower is better)
Translates to: LDVSVADSRFVR*VHGRQDLEGDP
Trigger: TGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CAA 72 bp GGCTTGCTCTCCCACTCGGCATTCTCCATCATCTGCTaGGCTATGCGCTCCGCGTTGCACTGCTCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: GLLSHSAFSIIC*AMRSALHCSLF
Trigger: GAAGAGGGAGCAGTGCAACGCGGAGCGCATAGCCAAGCAGATGATGGAGAATGCCGAGTGGGAGAGCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp AGCAGCCCTTTAGGACGCCACCCAGGTGGAGGTGGCTaGCTCTCCCACTCGGCATTCTCCATCATCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSPLGRHPGGGG*LSHSAFSIICL
Trigger: CAAGCAGATGATGGAGAATGCCGAGTGGGAGAGCAAGCCACCTCCACCTGGGTGGCGTCCTAAAGGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp GGTGGAGGTGGCTTGCTCTCCCACTCGGCATTCTCCATCATCTGCTaGGCTATGCGCTCCGCGTTGCACTGCTCCCTCTTCTGCTGTATG +
Preference number: 6 (lower is better)
Translates to: GGGGLLSHSAFSIIC*AMRSALHCSLFCCM
Trigger: CATACAGCAGAAGAGGGAGCAGTGCAACGCGGAGCGCATAGCCAAGCAGATGATGGAGAATGCCGAGTGGGAGAGCAAGCCACCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp ATTCTCTGTCTTGATGTCTCCGTGGCGGACTCCAGATTTGTGCGCTaGGTCCACGGCCGTCAGGATCTGGAAGGCGATCCAGCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: ILCLDVSVADSRFVR*VHGRQDLEGDPALL
Trigger: GAGAAGCGCTGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS TCA 72 bp ATGTCCATGGCTCTCTTCAGCTCTCCCCGCGCTCTCTaGTTGCTATTCAGGTCGACAAGCGGGGTTGAGGGG +
Preference number: 6 (lower is better)
Translates to: MSMALFSSPRAL*LLFRSTSGVEG
Trigger: CCCCTCAACCCCGCTTGTCGACCTGAATAGCAATCAGAGAGCGCGGGGAGAGCTGAAGAGAGCCATGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000191268.7
CDS TCA 72 bp TGCGAGGAACCTCTTGGACAAGGGCAAGGACTTTGGTaGGTGTCCTCAGGGCTTCAGCCCGCACTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: CEEPLGQGQGLW*VSSGLQPALLG
Trigger: TCCCAAGAGTGCGGGCTGAAGCCCTGAGGACACTCACCAAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp CCGGAACAGCATGGCTGCTTTCTCAGACGCCTTTTCTaGTGCTTTCTGGAAGGGGAGGCAGTTCTGGGCGGA +
Preference number: 6 (lower is better)
Translates to: PEQHGCFLRRLF*CFLEGEAVLGG
Trigger: TCCGCCCAGAACTGCCTCCCCTTCCAGAAAGCAGCAGAAAAGGCGTCTGAGAAAGCAGCCATGCTGTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS GCA 72 bp AAGGCGGCCAGTTTGGAGTCGCAGGACTTCAGTGTCTaGAGGCAGGACGTTATCACGGACACCAGGACAACC +
Preference number: 6 (lower is better)
Translates to: KAASLESQDFSV*RQDVITDTRTT
Trigger: GGTTGTCCTGGTGTCCGTGATAACGTCCTGCCTGCAGACACTGAAGTCCTGCGACTCCAAACTGGCCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp GTGATGCCTAAGGCGGCCAAGTCGATTACACCTTTCTaGCTGCTGTCGTGGAGGTGGCTCTGGTCTACCGCA +
Preference number: 6 (lower is better)
Translates to: VMPKAAKSITPF*LLSWRWLWSTA
Trigger: TGCGGTAGACCAGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAATCGACTTGGCCGCCTTAGGCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 72 bp GCTTGCTCTCCCACTCGGCATTCTCCATCATCTGCTTaGCTATGCGCTCCGCGTTGCACTGCTCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: ACSPTRHSPSSA*LCAPRCTAPSS
Trigger: AGAAGAGGGAGCAGTGCAACGCGGAGCGCATAGCCAAGCAGATGATGGAGAATGCCGAGTGGGAGAGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp GGATGCGAGCTCTGGAGGGATGACAGTGACTGGAGATaGGCAACTGGAACCTCATGTCCCAACACGCCATGG +
Preference number: 6 (lower is better)
Translates to: GCELWRDDSDWR*ATGTSCPNTPW
Trigger: CCATGGCGTGTTGGGACATGAGGTTCCAGTTGCCCATCTCCAGTCACTGTCATCCCTCCAGAGCTCGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp GTGAAGGCTGTAATTCAGACAGTGGCGGTGCGCTGCTaGCCCAGAGAGTCAGTCTCCTGTCGCCAGTTTCCA +
Preference number: 6 (lower is better)
Translates to: VKAVIQTVAVRC*PRESVSCRQFP
Trigger: TGGAAACTGGCGACAGGAGACTGACTCTCTGGGCCAGCAGCGCACCGCCACTGTCTGAATTACAGCCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp ACCATCACATTCTCTGTCTTGATGTCTCCGTGGCGGACTCCAGATTaGTGCGCTTGGTCCACGGCCGTCAGGATCTGGAAGGCGATCCAG +
Preference number: 6 (lower is better)
Translates to: TITFSVLMSPWRTPD*CAWSTAVRIWKAIQ
Trigger: CTGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAATGTGATGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CAA 90 bp TGGGGTTTCTGCAGCAGCCCTAGCTGGCACATGCAGGTCAGGGCATaGAGAGCTTTCACGATGACAAACTCCTCAGCATCGCTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: WGFCSSPSWHMQVRA*RAFTMTNSSASLRP
Trigger: AGGCCTCAGCGATGCTGAGGAGTTTGTCATCGTGAAAGCTCTCAATGCCCTGACCTGCATGTGCCAGCTAGGGCTGCTGCAGAAACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp CCGTGGCATAGGCAAGAACGGACTGTGCCCCGGAGTTaGAGTGATGCATGTCCACCACACAGCCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: PWHRQERTVPRS*SDACPPHSHLP
Trigger: AGGAAGATGGCTGTGTGGTGGACATGCATCACTTCAACTCCGGGGCACAGTCCGTTCTTGCCTATGCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp TCTCCCACTCGGCATTCTCCATCATCTGCTTGGCTATaGGCTCCGCGTTGCACTGCTCCCTCTTCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: SPTRHSPSSAWL*APRCTAPSSAV
Trigger: TACAGCAGAAGAGGGAGCAGTGCAACGCGGAGCGCATAGCCAAGCAGATGATGGAGAATGCCGAGTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp CCAGATTTGTGCGCTTGGTCCACGGCCGTCAGGATCTaGAAGGCGATCCAGCGCTTCTCGATGTTGTTTAGG +
Preference number: 6 (lower is better)
Translates to: PDLCAWSTAVRI*KAIQRFSMLFR
Trigger: CCTAAACAACATCGAGAAGCGCTGGATCGCCTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CCA 72 bp CTGGTGACCATCACATTCTCTGTCTTGATGTCTCCGTaGCGGACTCCAGATTTGTGCGCTTGGTCCACGGCC +
Preference number: 6 (lower is better)
Translates to: LVTITFSVLMSP*RTPDLCAWSTA
Trigger: GGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAATGTGATGGTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CCA 72 bp TCCCCTGTGAGAGCAACTTCTTCAGAAGTTGCGCTATaGTGGGGTCCTCAGGTGGAGGGCAGTCGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: SPVRATSSEVAL*WGPQVEGSREE
Trigger: CTCTTCTCGACTGCCCTCCACCTGAGGACCCCACCATAGCGCAACTTCTGAAGAAGTTGCTCTCACAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 72 bp GCGGCCAAGTCGATTACACCTTTCTGGCTGCTGTCGTaGAGGTGGCTCTGGTCTACCGCATTAGCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: AAKSITPFWLLS*RWLWSTALALA
Trigger: AGCCAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAATCGACTTGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CAA 72 bp TTCTCTGTCTTGATGTCTCCGTGGCGGACTCCAGATTaGTGCGCTTGGTCCACGGCCGTCAGGATCTGGAAG +
Preference number: 6 (lower is better)
Translates to: FSVLMSPWRTPD*CAWSTAVRIWK
Trigger: CTTCCAGATCCTGACGGCCGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS GCA 72 bp TTATCGGGCTCGTTCTCCATGTTGAGAGTTTTCAGCTaGACAAGCTCCAGGAATCGCAGAGCCGTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: LSGSFSMLRVFS*TSSRNRRAVSA
Trigger: GGCCGAGACGGCTCTGCGATTCCTGGAGCTTGTGCAGCTGAAAACTCTCAACATGGAGAACGAGCCCGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp AGAGCCATTCACCGTGGCATAGGCAAGAACGGACTGTaGCCCGGAGTTGAAGTGATGCATGTCCACCACACA +
Preference number: 6 (lower is better)
Translates to: RAIHRGIGKNGL*PGVEVMHVHHT
Trigger: TGTGTGGTGGACATGCATCACTTCAACTCCGGGGCACAGTCCGTTCTTGCCTATGCCACGGTGAATGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp TTCTCAGGGTCGCTTAGCAACGTGACCACCTTCTGCTaGACCATCTCATGCAAGGCCTGGAGCTCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: FSGSLSNVTTFC*TISCKAWSSVS
Trigger: TGACACAGAGCTCCAGGCCTTGCATGAGATGGTCCAGCAGAAGGTGGTCACGTTGCTAAGCGACCCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp GTGATCATGTGGGACAAGAGAACGTCGTTGGCCTTCTaGCGTCCGAAGAAGACGCACAAGCGTGTGATCCCA +
Preference number: 6 (lower is better)
Translates to: VIMWDKRTSLAF*RPKKTHKRVIP
Trigger: TGGGATCACACGCTTGTGCGTCTTCTTCGGACGCCAGAAGGCCAACGACGTTCTCTTGTCCCACATGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp GGAGGGCAGTCGAGAAGAGAGCCATTTCGCTTCTTCTaGCGCATGTGGAGATGTCTGAACAAGCTGGCGATG +
Preference number: 6 (lower is better)
Translates to: GGQSRREPFRFF*RMWRCLNKLAM
Trigger: CATCGCCAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAAGCGAAATGGCTCTCTTCTCGACTGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CAA 72 bp GCGCTCTCTGATTGCTATTCAGGTCGACAAGCGGGGTaGAGGGGTCTCTCATGTACTCTAACTCGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: ALSDCYSGRQAG*RGLSCTLTRWR
Trigger: TCGCCACCGAGTTAGAGTACATGAGAGACCCCTCAACCCCGCTTGTCGACCTGAATAGCAATCAGAGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000191268.7
CDS CAA 72 bp TGCAGCAGCCCTAGCTGGCACATGCAGGTCAGGGCATaGAGAGCTTTCACGATGACAAACTCCTCAGCATCG +
Preference number: 6 (lower is better)
Translates to: CSSPSWHMQVRA*RAFTMTNSSAS
Trigger: CGATGCTGAGGAGTTTGTCATCGTGAAAGCTCTCAATGCCCTGACCTGCATGTGCCAGCTAGGGCTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp CCGTGCTACTCACAACCGGGATCACAGGCTTCTTACTaGGGATGTGAGCTGCTTCTGAGACCTGTGGAGACG +
Preference number: 6 (lower is better)
Translates to: PCYSQPGSQASY*GCELLLRPVET
Trigger: CGTCTCCACAGGTCTCAGAAGCAGCTCACATCCCAAGTAAGAAGCCTGTGATCCCGGTTGTGAGTAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp GTTAGGAGGACCCAGTTCCAACTGGTGACCATCACATTCTCTGTCTaGATGTCTCCGTGGCGGACTCCAGATTTGTGCGCTTGGTCCACG +
Preference number: 6 (lower is better)
Translates to: VRRTQFQLVTITFSV*MSPWRTPDLCAWST
Trigger: CGTGGACCAAGCGCACAAATCTGGAGTCCGCCACGGAGACATCAAGACAGAGAATGTGATGGTCACCAGTTGGAACTGGGTCCTCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS CAA 90 bp ATATTGACATCGTTGCGAGGAACCTCTTGGACAAGGGCAAGGACTTaGGTGAGTGTCCTCAGGGCTTCAGCCCGCACTCTTGGGACAGAG +
Preference number: 6 (lower is better)
Translates to: ILTSLRGTSWTRART*VSVLRASARTLGTE
Trigger: CTCTGTCCCAAGAGTGCGGGCTGAAGCCCTGAGGACACTCACCAAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCAACGATGTCAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp ACGGCAGGACCGTGCTACTCACAACCGGGATCACAGGCTTCTTACTaGGGATGTGAGCTGCTTCTGAGACCTGTGGAGACGTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: TAGPCYSQPGSQASY*GCELLLRPVETLTK
Trigger: CTTTGTCAACGTCTCCACAGGTCTCAGAAGCAGCTCACATCCCAAGTAAGAAGCCTGTGATCCCGGTTGTGAGTAGCACGGTCCTGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp TGGCCTTCTGGCGTCCGAAGAAGACGCACAAGCGTGTaGTCCCACTCTCCATCAGCGTCTGTTTCACGATAT +
Preference number: 6 (lower is better)
Translates to: WPSGVRRRRTSV*SHSPSASVSRY
Trigger: ATATCGTGAAACAGACGCTGATGGAGAGTGGGATCACACGCTTGTGCGTCTTCTTCGGACGCCAGAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp GTTTCCATGTCCCACATGGAGACTTCATTGTTGCCCTaGACAGCTGCGATTACCCAGGACTGGTACAGGGGG +
Preference number: 6 (lower is better)
Translates to: VSMSHMETSLLP*TAAITQDWYRG
Trigger: CCCCCTGTACCAGTCCTGGGTAATCGCAGCTGTTCAGGGCAACAATGAAGTCTCCATGTGGGACATGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp CTTCTTCAGAAGTTGCGCTATGGTGGGGTCCTCAGGTaGAGGGCAGTCGAGAAGAGAGCCATTTCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LLQKLRYGGVLR*RAVEKRAISLL
Trigger: AAGAAGCGAAATGGCTCTCTTCTCGACTGCCCTCCACCTGAGGACCCCACCATAGCGCAACTTCTGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS TCA 72 bp AGCGCTTCTCGATGTTGTTTAGGAACGGGCGGGTACTaGTGCGATCGTAGAGGTTGTCTCTCACATACTGCC +
Preference number: 6 (lower is better)
Translates to: SASRCCLGTGGY*CDRRGCLSHTA
Trigger: GGCAGTATGTGAGAGACAACCTCTACGATCGCATCAGTACCCGCCCGTTCCTAAACAACATCGAGAAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000190358.2
ENSMUST00000191268.7
CDS TCA 72 bp GGTCATGCTTTAATGTCCACGCGTTGCTTGAAGACCTaGGATCCCATCCAACCAGAGAGCCATTCACCGTGG +
Preference number: 6 (lower is better)
Translates to: GHALMSTRCLKT*DPIQPESHSPW
Trigger: CCACGGTGAATGGCTCTCTGGTTGGATGGGATCTCAGGTCTTCAAGCAACGCGTGGACATTAAAGCATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp CTGGGCCAGGTGGGCTATGCCGGGGAGAATATACTCTaGATAGATATTGACATCGTTGCGAGGAACCTCTTG +
Preference number: 6 (lower is better)
Translates to: LGQVGYAGENIL*IDIDIVARNLL
Trigger: CAAGAGGTTCCTCGCAACGATGTCAATATCTATCCAGAGTATATTCTCCCCGGCATAGCCCACCTGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp TTGAGGAAAGTGATCATGTGGGACAAGAGAACGTCGTaGGCCTTCTGGCGTCCGAAGAAGACGCACAAGCGT +
Preference number: 6 (lower is better)
Translates to: LRKVIMWDKRTS*AFWRPKKTHKR
Trigger: ACGCTTGTGCGTCTTCTTCGGACGCCAGAAGGCCAACGACGTTCTCTTGTCCCACATGATCACTTTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp TCTGTTTCACGATATTCTCAGGGTCGCTTAGCAACGTaGCCACCTTCTGCTGGACCATCTCATGCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: SVSRYSQGRLAT*PPSAGPSHARP
Trigger: AGGCCTTGCATGAGATGGTCCAGCAGAAGGTGGTCACGTTGCTAAGCGACCCTGAGAATATCGTGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp AGCCATTTCGCTTCTTCTGGCGCATGTGGAGATGTCTaGACAAGCTGGCGATGTCTTTCGACCTCAGAGCAT +
Preference number: 6 (lower is better)
Translates to: SHFASSGACGDV*TSWRCLSTSEH
Trigger: ATGCTCTGAGGTCGAAAGACATCGCCAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAAGCGAAATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS TCA 72 bp CTCACAACCGGGATCACAGGCTTCTTACTTGGGATGTaGGCTGCTTCTGAGACCTGTGGAGACGTTGACAAA +
Preference number: 6 (lower is better)
Translates to: LTTGITGFLLGM*AASETCGDVDK
Trigger: TTTGTCAACGTCTCCACAGGTCTCAGAAGCAGCTCACATCCCAAGTAAGAAGCCTGTGATCCCGGTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp TCGAGAAGAGAGCCATTTCGCTTCTTCTGGCGCATGTaGAGATGTCTGAACAAGCTGGCGATGTCTTTCGAC +
Preference number: 6 (lower is better)
Translates to: SRREPFRFFWRM*RCLNKLAMSFD
Trigger: GTCGAAAGACATCGCCAGCTTGTTCAGACATCTCCACATGCGCCAGAAGAAGCGAAATGGCTCTCTTCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 72 bp AAGTCGATTACACCTTTCTGGCTGCTGTCGTGGAGGTaGCTCTGGTCTACCGCATTAGCTTTGGCTCGATTT +
Preference number: 6 (lower is better)
Translates to: KSITPFWLLSWR*LWSTALALARF
Trigger: AAATCGAGCCAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGACAGCAGCCAGAAAGGTGTAATCGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CAA 90 bp TTCTTATCATTGAGGAAAGTGATCATGTGGGACAAGAGAACGTCGTaGGCCTTCTGGCGTCCGAAGAAGACGCACAAGCGTGTGATCCCA +
Preference number: 6 (lower is better)
Translates to: FLSLRKVIMWDKRTS*AFWRPKKTHKRVIP
Trigger: TGGGATCACACGCTTGTGCGTCTTCTTCGGACGCCAGAAGGCCAACGACGTTCTCTTGTCCCACATGATCACTTTCCTCAATGATAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp TTCTGGCTGCTGTCGTGGAGGTGGCTCTGGTCTACCGCATTAGCTTaGGCTCGATTTGATTTCATCATGAAGTCCTTCAGTGCCAGAAGT +
Preference number: 6 (lower is better)
Translates to: FWLLSWRWLWSTALA*ARFDFIMKSFSARS
Trigger: ACTTCTGGCACTGAAGGACTTCATGATGAAATCAAATCGAGCCAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGACAGCAGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CAA 90 bp GAAGTGATGAGGCCTGACTTTAGGTCATGCTTTAATGTCCACGCGTaGCTTGAAGACCTGAGATCCCATCCAACCAGAGAGCCATTCACC +
Preference number: 6 (lower is better)
Translates to: EVMRPDFRSCFNVHA*LEDLRSHPTREPFT
Trigger: GGTGAATGGCTCTCTGGTTGGATGGGATCTCAGGTCTTCAAGCAACGCGTGGACATTAAAGCATGACCTAAAGTCAGGCCTCATCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp AGCATGTCCTCCTTCTCGAGGTGTCAAAGAAATAGTTaGAATCCGCTGGGTTGTCCTCGGGAAGATACGTGG +
Preference number: 6 (lower is better)
Translates to: SMSSFSRCQRNS*NPLGCPREDTW
Trigger: CCACGTATCTTCCCGAGGACAACCCAGCGGATTTCAACTATTTCTTTGACACCTCGAGAAGGAGGACATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000191268.7
CDS TCA 72 bp GGGCTATGCCGGGGAGAATATACTCTGGATAGATATTaGCATCGTTGCGAGGAACCTCTTGGACAAGGGCAA +
Preference number: 6 (lower is better)
Translates to: GLCRGEYTLDRY*HRCEEPLGQGQ
Trigger: TTGCCCTTGTCCAAGAGGTTCCTCGCAACGATGTCAATATCTATCCAGAGTATATTCTCCCCGGCATAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp GAGACTCTGATGCGATTCACAGCAGATTTGTGCTCATaGAGATGTGCAACTAGCAGCCCTTTAGGACGCCAC +
Preference number: 6 (lower is better)
Translates to: ETLMRFTADLCS*RCATSSPLGRH
Trigger: GTGGCGTCCTAAAGGGCTGCTAGTTGCACATCTTCATGAGCACAAATCTGCTGTGAATCGCATCAGAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp TTCCAAGAAGCTGGACAGCACCATTATCAGATGCTATaGCCAAGTAGTGGGAGCCTTGGCAAAACGTTAGCG +
Preference number: 6 (lower is better)
Translates to: FQEAGQHHYQML*PSSGSLGKTLA
Trigger: CGCTAACGTTTTGCCAAGGCTCCCACTACTTGGCCATAGCATCTGATAATGGTGCTGTCCAGCTTCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp AGGCCTGACTTTAGGTCATGCTTTAATGTCCACGCGTaGCTTGAAGACCTGAGATCCCATCCAACCAGAGAG +
Preference number: 6 (lower is better)
Translates to: RPDFRSCFNVHA*LEDLRSHPTRE
Trigger: CTCTCTGGTTGGATGGGATCTCAGGTCTTCAAGCAACGCGTGGACATTAAAGCATGACCTAAAGTCAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp GAGAATATACTCTGGATAGATATTGACATCGTTGCGAGGAACCTCTaGGACAAGGGCAAGGACTTTGGTGAGTGTCCTCAGGGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: ENILWIDIDIVARNL*DKGKDFGECPQGFS
Trigger: GCTGAAGCCCTGAGGACACTCACCAAAGTCCTTGCCCTTGTCCAAGAGGTTCCTCGCAACGATGTCAATATCTATCCAGAGTATATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp GCCCAAATCTTTCCGTATAACCAAAATCCGCTCATCTaGAGAGAGAAAGGTTTCCTTGGCGAACTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: AQIFPYNQNPLI*REKGFLGELGH
Trigger: ATGGCCCAGTTCGCCAAGGAAACCTTTCTCTCTGCAGATGAGCGGATTTTGGTTATACGGAAAGATTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp CTCAATTCCAAGAAGCTGGACAGCACCATTATCAGATaGTATGGCCAAGTAGTGGGAGCCTTGGCAAAACGT +
Preference number: 6 (lower is better)
Translates to: LNSKKLDSTIIR*YGQVVGALAKR
Trigger: ACGTTTTGCCAAGGCTCCCACTACTTGGCCATAGCATCTGATAATGGTGCTGTCCAGCTTCTTGGAATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp ACGGCAAAGGAAGTGATGAGGCCTGACTTTAGGTCATaGTTTAATGTCCACGCGTTGCTTGAAGACCTGAGA +
Preference number: 6 (lower is better)
Translates to: TAKEVMRPDFRS*FNVHALLEDLR
Trigger: TCTCAGGTCTTCAAGCAACGCGTGGACATTAAAGCATGACCTAAAGTCAGGCCTCATCACTTCCTTTGCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp CAGACCACTGGCCCTGGACTCCCCTTCTGCTTTTTCTaGCAAATCATGTCCACAGAGGTTGTGAATAATGTT +
Preference number: 6 (lower is better)
Translates to: QTTGPGLPFCFF*QIMSTEVVNNV
Trigger: AACATTATTCACAACCTCTGTGGACATGATTTGCCAGAAAAAGCAGAAGGGGAGTCCAGGGCCAGTGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CCA 72 bp ACTGAGCAGGACCAGCTTCCTCTCAATCTGTATCACTaGCTGTGTAATATACGGGTCAAGATACGGCATGAG +
Preference number: 6 (lower is better)
Translates to: TEQDQLPLNLYH*LCNIRVKIRHE
Trigger: CTCATGCCGTATCTTGACCCGTATATTACACAGCCAGTGATACAGATTGAGAGGAAGCTGGTCCTGCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CAA 72 bp CTGTCGTGGAGGTGGCTCTGGTCTACCGCATTAGCTTaGGCTCGATTTGATTTCATCATGAAGTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LSWRWLWSTALA*ARFDFIMKSFS
Trigger: ACTGAAGGACTTCATGATGAAATCAAATCGAGCCAAAGCTAATGCGGTAGACCAGAGCCACCTCCACGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS CCA 72 bp CCTTCTCGAGGTGTCAAAGAAATAGTTGAAATCCGCTaGGTTGTCCTCGGGAAGATACGTGGGCTTAAAACT +
Preference number: 6 (lower is better)
Translates to: PSRGVKEIVEIR*VVLGKIRGLKT
Trigger: AGTTTTAAGCCCACGTATCTTCCCGAGGACAACCCAGCGGATTTCAACTATTTCTTTGACACCTCGAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000188784.2
ENSMUST00000191268.7
CDS CAA 90 bp ATGCTATCAAAGAAAGCTCCACGCAGGTGCCAATCATTCTTATCATaGAGGAAAGTGATCATGTGGGACAAGAGAACGTCGTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: MLSKKAPRRCQSFLS*RKVIMWDKRTSLAF
Trigger: GAAGGCCAACGACGTTCTCTTGTCCCACATGATCACTTTCCTCAATGATAAGAATGATTGGCACCTGCGTGGAGCTTTCTTTGATAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp GCTTCCAAACGCTTCTCGGGCTCACGGTTAATCATCTaGGTTACCAAGTCTCTGATACTGCGATCTTCAATT +
Preference number: 6 (lower is better)
Translates to: ASKRFSGSRLII*VTKSLILRSSI
Trigger: AATTGAAGATCGCAGTATCAGAGACTTGGTAACTCAGATGATTAACCGTGAGCCCGAGAAGCGTTTGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp GTGGCTCTGGTCTACCGCATTAGCTTTGGCTCGATTTaGTTTCATCATGAAGTCCTTCAGTGCCAGAAGTTT +
Preference number: 6 (lower is better)
Translates to: VALVYRISFGSI*FHHEVLQCQKF
Trigger: AAACTTCTGGCACTGAAGGACTTCATGATGAAATCAAATCGAGCCAAAGCTAATGCGGTAGACCAGAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065778.13
ENSMUST00000186943.2
ENSMUST00000191268.7
CDS TCA 72 bp TTTAGGCAGGGCCTGTGGGATATTCGGTGGCTCCAATaGCCCAAACATGCTTTTCCACTCTTCATTTACATT +
Preference number: 6 (lower is better)
Translates to: FRQGLWDIRWLQ*PKHAFPLFIYI
Trigger: AATGTAAATGAAGAGTGGAAAAGCATGTTTGGGTCATTGGAGCCACCGAATATCCCACAGGCCCTGCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp CCTTCTGCTTATTCTGAATTTCCTGGACGACCTCGGTaGCTTCTATTATCTTCTTGTAGTAGGAGACAGACG +
Preference number: 6 (lower is better)
Translates to: PSAYSEFPGRPR*LLLSSCSRRQT
Trigger: CGTCTGTCTCCTACTACAAGAAGATAATAGAAGGCACCGAGGTCGTCCAGGAAATTCAGAATAAGCAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp AAGAAAGCTCCACGCAGGTGCCAATCATTCTTATCATaGAGGAAAGTGATCATGTGGGACAAGAGAACGTCG +
Preference number: 6 (lower is better)
Translates to: KKAPRRCQSFLS*RKVIMWDKRTS
Trigger: CGACGTTCTCTTGTCCCACATGATCACTTTCCTCAATGATAAGAATGATTGGCACCTGCGTGGAGCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp CCTGTGGGATATTCGGTGGCTCCAATGACCCAAACATaGTTTTCCACTCTTCATTTACATTGGAGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: PVGYSVAPMTQT*FSTLHLHWSLV
Trigger: AACAAGACTCCAATGTAAATGAAGAGTGGAAAAGCATGTTTGGGTCATTGGAGCCACCGAATATCCCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 90 bp GGTGGCTCCAATGACCCAAACATGCTTTTCCACTCTTCATTTACATaGGAGTCTTGTTTCACATGTTTCCTAGCACGTTTCTCATCTGGT +
Preference number: 6 (lower is better)
Translates to: GGSNDPNMLFHSSFT*ESCFTCFLARFSSG
Trigger: ACCAGATGAGAAACGTGCTAGGAAACATGTGAAACAAGACTCCAATGTAAATGAAGAGTGGAAAAGCATGTTTGGGTCATTGGAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp ACACCGACTATGCTATCAAAGAAAGCTCCACGCAGGTaGCAATCATTCTTATCATTGAGGAAAGTGATCATG +
Preference number: 6 (lower is better)
Translates to: TPTMLSKKAPRR*QSFLSLRKVIM
Trigger: CATGATCACTTTCCTCAATGATAAGAATGATTGGCACCTGCGTGGAGCTTTCTTTGATAGCATAGTCGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS GCA 72 bp TCCCCTCCATCTTCTGGCTGTTCCAGATCTTCACTGTaGCATCATTTGAACATGTTGCAAAAAGTAAGTGTT +
Preference number: 6 (lower is better)
Translates to: SPPSSGCSRSSL*HHLNMLQKVSV
Trigger: AACACTTACTTTTTGCAACATGTTCAAATGATGGCACAGTGAAGATCTGGAACAGCCAGAAGATGGAGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS TCA 72 bp TCTGCTTTTTCTGGCAAATCATGTCCACAGAGGTTGTaGATAATGTTGCCCAAATCTTTCCGTATAACCAAA +
Preference number: 6 (lower is better)
Translates to: SAFSGKSCPQRL*IMLPKSFRITK
Trigger: TTTGGTTATACGGAAAGATTTGGGCAACATTATTCACAACCTCTGTGGACATGATTTGCCAGAAAAAGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp TTTCACATGTTTCCTAGCACGTTTCTCATCTGGTTCTaGTTTGGTTTTAACAAGATCAACTTGTCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: FHMFPSTFLIWF*FGFNKINLSPS
Trigger: ACTGGGAGACAAGTTGATCTTGTTAAAACCAAACAAGAACCAGATGAGAAACGTGCTAGGAAACATGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp AAACATGCTTTTCCACTCTTCATTTACATTGGAGTCTaGTTTCACATGTTTCCTAGCACGTTTCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: KHAFPLFIYIGV*FHMFPSTFLIW
Trigger: CCAGATGAGAAACGTGCTAGGAAACATGTGAAACAAGACTCCAATGTAAATGAAGAGTGGAAAAGCATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7
CDS CAA 72 bp AATGACCCAAACATGCTTTTCCACTCTTCATTTACATaGGAGTCTTGTTTCACATGTTTCCTAGCACGTTTC +
Preference number: 6 (lower is better)
Translates to: NDPNMLFHSSFT*ESCFTCFLARF
Trigger: GAAACGTGCTAGGAAACATGTGAAACAAGACTCCAATGTAAATGAAGAGTGGAAAAGCATGTTTGGGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065778.13
ENSMUST00000191268.7