Pregenerated sensors for PIK3R3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028698Ensembl transcript IDs: ENSMUST00000030464.14, ENSMUST00000106490.3, ENSMUST00000147292.8
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAAACCCCATGAAACCAATATCTGCTTCCAGCTTAGTCCATCAGTaGAGCAGCACAGCCGAGGCCAGAGACCCTGGGCCCCTCATTTCT | + |
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Preference number: 1 (lower is better) Translates to: PNPMKPISASSLVHQ*SSTAEARDPGPLIS Trigger: AGAAATGAGGGGCCCAGGGTCTCTGGCCTCGGCTGTGCTGCTGCACTGATGGACTAAGCTGGAAGCAGATATTGGTTTCATGGGGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 90 bp | GGCTTAAACCACAGCCACGGAAGCATGAGAGCAGGCTGTGTGCACTaGCTTAACAGCAGGCTCACAAAAAGGGCAAGCAGGAAAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GLNHSHGSMRAGCVH*LNSRLTKRASRKAC Trigger: ACAGGCTTTCCTGCTTGCCCTTTTTGTGAGCCTGCTGTTAAGGCAGTGCACACAGCCTGCTCTCATGCTTCCGTGGCTGTGGTTTAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 90 bp | CCTGCTTCCAGACTCCCTCAGACAGCAGGGCCACTCTTAGGAGACTaGTCCTCATGCCATTTCCACAGCTCAGGATCAGATAAATCATGT | + |
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Preference number: 1 (lower is better) Translates to: PASRLPQTAGPLLGD*SSCHFHSSGSDKSC Trigger: ACATGATTTATCTGATCCTGAGCTGTGGAAATGGCATGAGGAGCAGTCTCCTAAGAGTGGCCCTGCTGTCTGAGGGAGTCTGGAAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 90 bp | CATGTGATGGACCCTTCACCATGGATACCAGGCCTCATGTGCCTGTaGTTTACTGAGGTCTCTGACCACAAACTCGAGTCCTCCTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: HVMDPSPWIPGLMCL*FTEVSDHKLESSFS Trigger: GCTAAAGGAGGACTCGAGTTTGTGGTCAGAGACCTCAGTAAATCACAGGCACATGAGGCCTGGTATCCATGGTGAAGGGTCCATCACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 90 bp | AACTGCCTGACTGCACATTACTGGGCTCAAGCAGCTGAGTCATACTaGGCCTGTTATGGCTCCAGAACTGACTCTGAAGCAGCTGAACTC | + |
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Preference number: 1 (lower is better) Translates to: NCLTAHYWAQAAESY*ACYGSRTDSEAAEL Trigger: GAGTTCAGCTGCTTCAGAGTCAGTTCTGGAGCCATAACAGGCTCAGTATGACTCAGCTGCTTGAGCCCAGTAATGTGCAGTCAGGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 90 bp | CCGAGGCCAGAGACCCTGGGCCCCTCATTTCTAAATCCAAGCTACTaGTTGGCCTCTCCATTTCACATTCACAGAATCACTTGTGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: PRPETLGPSFLNPSY*LASPFHIHRITCAK Trigger: TTTTGCACAAGTGATTCTGTGAATGTGAAATGGAGAGGCCAAGCAGTAGCTTGGATTTAGAAATGAGGGGCCCAGGGTCTCTGGCCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 90 bp | GGAAACAAGGGTGGTTGTCACAAATGGCTAGAGCTAAGTCAAGAATaGGCAGTTGGCAGCAAAGGACCAAGAATGGACCTCTGGTGTATG | + |
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Preference number: 1 (lower is better) Translates to: GNKGGCHKWLELSQE*AVGSKGPRMDLWCM Trigger: CATACACCAGAGGTCCATTCTTGGTCCTTTGCTGCCAACTGCTCATTCTTGACTTAGCTCTAGCCATTTGTGACAACCACCCTTGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 90 bp | AAAGGGGAAGAGACTATCAAATCAAAACAACTCCCAGCAGAACTGTaGCCTGCTGCATTCTTAGGGTTGAGGACAAAGGGATGTGGACTC | + |
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Preference number: 1 (lower is better) Translates to: KGEETIKSKQLPAEL*PAAFLGLRTKGCGL Trigger: GAGTCCACATCCCTTTGTCCTCAACCCTAAGAATGCAGCAGGTCACAGTTCTGCTGGGAGTTGTTTTGATTTGATAGTCTCTTCCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 90 bp | GGAAGAGACTATCAAATCAAAACAACTCCCAGCAGAACTGTGACCTaGTGCATTCTTAGGGTTGAGGACAAAGGGATGTGGACTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: GRDYQIKTTPSRTVT*CILRVEDKGMWTLQ Trigger: CTGAAGAGTCCACATCCCTTTGTCCTCAACCCTAAGAATGCAGCAGGTCACAGTTCTGCTGGGAGTTGTTTTGATTTGATAGTCTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 90 bp | AGGACTGAAAACCTGTCTTTCTCCATTGTCCAGCCCAGGTGTAGATaGTGCTTTCTCCTGCATATCTTCCATGTCTGCCTACAAGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: RTENLSFSIVQPRCR*CFLLHIFHVCLQGK Trigger: TTTACCTTGTAGGCAGACATGGAAGATATGCAGGAGAAAGCAGCATCTACACCTGGGCTGGACAATGGAGAAAGACAGGTTTTCAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CCA 90 bp | GTACAGAAGTGTACATTCAGCTACTACTGTCCTCCCCTTAGACCTTaGTCTGGCGATGCTGCTTTGTTGGTTTTTGAACACAGTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: VQKCTFSYYCPPLRP*SGDAALLVFEHSAL Trigger: TAAAGCACTGTGTTCAAAAACCAACAAAGCAGCATCGCCAGACCAAGGTCTAAGGGGAGGACAGTAGTAGCTGAATGTACACTTCTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 90 bp | AGAGACTATCAAATCAAAACAACTCCCAGCAGAACTGTGACCTGCTaGATTCTTAGGGTTGAGGACAAAGGGATGTGGACTCTTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RDYQIKTTPSRTVTC*ILRVEDKGMWTLQK Trigger: TTTCTGAAGAGTCCACATCCCTTTGTCCTCAACCCTAAGAATGCAGCAGGTCACAGTTCTGCTGGGAGTTGTTTTGATTTGATAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CCA 90 bp | GTCACCAAAGGAAGTGCTCAGGGAAAGTCATATTCATCTTTATTTTaGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTGATGACCCA | + |
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Preference number: 1 (lower is better) Translates to: VTKGSAQGKSYSSLF*PPNFIFPDCKPDDP Trigger: TGGGTCATCAGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAATAAAGATGAATATGACTTTCCCTGAGCACTTCCTTTGGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 90 bp | CATCAATGGCATGCCCTATCAACTGTGACAATTATTCAAAACTTTTaGCCTATCTCTATACTGTGGTTTCTTCTAGACACTGTCACCAAA | + |
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Preference number: 1 (lower is better) Translates to: HQWHALSTVTIIQNF*PISILWFLLDTVTK Trigger: TTTGGTGACAGTGTCTAGAAGAAACCACAGTATAGAGATAGGTCAAAAGTTTTGAATAATTGTCACAGTTGATAGGGCATGCCATTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CCA 90 bp | TGGCAGAAAAATAAAAAGATAGCTTCCGATTTATTAAATGATCCCTaGTCTCAGCTCCCACAAAGTGGTTACTCAAAGGGAAAGAATATA | + |
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Preference number: 1 (lower is better) Translates to: WQKNKKIASDLLNDP*SQLPQSGYSKGKNI Trigger: TATATTCTTTCCCTTTGAGTAACCACTTTGTGGGAGCTGAGACCAGGGATCATTTAATAAATCGGAAGCTATCTTTTTATTTTTCTGCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CCA 90 bp | CAGCAATGTCTGAACACATTTGGTGACAAGAACAATTTGCAAAAGTaGTCTAGAAATTACATTATGAATTGTTCCAACACAAGACACAGT | + |
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Preference number: 1 (lower is better) Translates to: QQCLNTFGDKNNLQK*SRNYIMNCSNTRHS Trigger: ACTGTGTCTTGTGTTGGAACAATTCATAATGTAATTTCTAGACCACTTTTGCAAATTGTTCTTGTCACCAAATGTGTTCAGACATTGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CCA 90 bp | TTAAACCACAGCCACGGAAGCATGAGAGCAGGCTGTGTGCACTGCCTTAACAGCCCTCCCCTTAGACCTTaGTCTGGCGATGCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LNHSHGSMRAGCVHCLNSPPLRP*SGDAAL Trigger: CAAAGCAGCATCGCCAGACCAAGGTCTAAGGGGAGG...GCTGTTAAGGCAGTGCACACAGCCTGCTCTCATGCTTCCGTGGCTGTGGTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTGCCTGAAGCAGGAAAGCCTGTaGATTATTTCCCCAGATAGT | + |
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Preference number: 2 (lower is better) Translates to: SLIVSLMTQAQAACLNCLKQESL*IISPDS Trigger: ACTATCTGGGGAAATAATCCACAGGCTTTCCTGCTT...CAGGCAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CAA 90 bp | AGGCCAGAGACCCTGGGCCCCTCATTTCTAAATCCAAGCTACTGCTaGGCCTCTCCATTTCACATTCACAGAATCACTTGTGCAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: RPETLGPSFLNPSYC*ASPFHIHRITCAKQ Trigger: TTGTTTTGCACAAGTGATTCTGTGAATGTGAAATGGAGAGGCCAAGCAGTAGCTTGGATTTAGAAATGAGGGGCCCAGGGTCTCTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTGACAAGCAGTCTACGTTaGAAGAATGCCCTCATCGTA | + |
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Preference number: 2 (lower is better) Translates to: IFPDCKPDDPGTGCLSKLTSSLR*KNALIV Trigger: TACGATGAGGGCATTCTTTCAACGTAGACTGCTTGT...CAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | AAAGTACCAAAGTTACATGCGAGGATTTGTAAGGAAACAAGGGTGGTTGTCACAAGCTTAGTCCATCAGTaGAGCAGCACAGCCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KVPKLHARICKETRVVVTSLVHQ*SSTAEA Trigger: GGCCTCGGCTGTGCTGCTGCACTGATGGACTAAGCT...TGTGACAACCACCCTTGTTTCCTTACAAATCCTCGCATGTAACTTTGGTACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTGCCTGGCACCAACTTCATTATaGCTCAAAGCTTACTATTTC | + |
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Preference number: 2 (lower is better) Translates to: SLIVSLMTQAQAACLNCLAPTSL*LKAYYF Trigger: GAAATAGTAAGCTTTGAGTCATAATGAAGTTGGTGC...CAGGCAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTGCCTGTCTACGTTGAAAGAATaGCCTCATCGTAGTCTAATA | + |
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Preference number: 2 (lower is better) Translates to: SLIVSLMTQAQAACLNCLSTLKE*PHRSLI Trigger: TATTAGACTACGATGAGGGCATTCTTTCAACGTAGA...CAGGCAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | AAAGTACCAAAGTTACATGCGAGGATTTGTAAGGAAACAAGGGTGGTTGTCACAGCAGGCTGTGTGCACTaGCTTAACAGCAGGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: KVPKLHARICKETRVVVTAGCVH*LNSRLT Trigger: TGTGAGCCTGCTGTTAAGGCAGTGCACACAGCCTGC...TGTGACAACCACCCTTGTTTCCTTACAAATCCTCGCATGTAACTTTGGTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CCA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGATTTCCTGTTGGGGACTaGCTGATCTGGGGACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRFPVGD*LIWGLA Trigger: AGCCAGTCCCCAGATCAGCCAGTCCCCAACAGGAAA...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGACAACAAACCCAAACCCCATGAAACCAATATCTGCTTCCAGCTTAGTCTAAATCCAAGCTACTaGTTGGCCTCTCCATTTCAC | + |
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Preference number: 2 (lower is better) Translates to: VPDNKPKPHETNICFQLSLNPSY*LASPFH Trigger: GTGAAATGGAGAGGCCAAGCAGTAGCTTGGATTTAG...ACTAAGCTGGAAGCAGATATTGGTTTCATGGGGTTTGGGTTTGTTGTCAGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | TGGTACAGAAGTGTACATTCAGCTACTACTGTCCTCCCCTTAGACCTTGGTCTGCATGAAACCAATATCTaGTTCCAGCTTAGTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: WYRSVHSATTVLPLDLGLHETNI*FQLSPS Trigger: TGATGGACTAAGCTGGAAGCAGATATTGGTTTCATG...CAGACCAAGGTCTAAGGGGAGGACAGTAGTAGCTGAATGTACACTTCTGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CCA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGACTGACTGCACATTACTaGGCTCAAGCAGCTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRLTAHY*AQAAES Trigger: TGACTCAGCTGCTTGAGCCCAGTAATGTGCAGTCAG...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CAA 90 bp | AAGTACCAAAGTTACATGCGAGGATTTGTAAGGAAACAAGGGTGGTaGTCACAAATGGCTAGAGCTAAGTCAAGAATGAGCAGTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KYQSYMRGFVRKQGW*SQMARAKSRMSSWQ Trigger: CTGCCAACTGCTCATTCTTGACTTAGCTCTAGCCATTTGTGACAACCACCCTTGTTTCCTTACAAATCCTCGCATGTAACTTTGGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCCACAAAGTGGTTACTCAAAGGGAAAGAATATAGGACTGAAAACCTGTCAAACCCAAACCCCATaGAACCAATATCTGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QLPQSGYSKGKNIGLKTCQTQTP*NQYLLP Trigger: TGGAAGCAGATATTGGTTTCATGGGGTTTGGGTTTG...ACAGGTTTTCAGTCCTATATTCTTTCCCTTTGAGTAACCACTTTGTGGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAGGGAAAGTCATATTCATCTTTATTTTGGCCCCCAAACTTCATCTTCCCAATCGGCTCTTTATTTaGGGGAAAGGGGAAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: CSGKVIFIFILAPKLHLPNRLFI*GKGEET Trigger: AGTCTCTTCCCCTTTCCCCCAAATAAAGAGCCGATT...GGGAAGATGAAGTTTGGGGGCCAAAATAAAGATGAATATGACTTTCCCTGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | TGCTCAGGGAAAGTCATATTCATCTTTATTTTGGCCCCCAAACTTCATCTTCCCTCACAGAATCACTTGTaGAAAACAAGCAGTCTACGT | + |
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Preference number: 2 (lower is better) Translates to: CSGKVIFIFILAPKLHLPSQNHL*KTSSLR Trigger: ACGTAGACTGCTTGTTTTGCACAAGTGATTCTGTGA...GGGAAGATGAAGTTTGGGGGCCAAAATAAAGATGAATATGACTTTCCCTGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CCA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGAGCGATGCTGCTTTGTTaGTTTTTGAACACAGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRAMLLC*FLNTVL Trigger: AAGCACTGTGTTCAAAAACCAACAAAGCAGCATCGC...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR TCA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGACTTCAACCACAGTATTaGATAACATGTCATGTGATG | + |
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Preference number: 2 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRLQPQY*ITCHVM Trigger: CATCACATGACATGTTATTCAATACTGTGGTTGAAG...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGACATATCTTCCATGTCTaGCTACAAGGTAAAGACATT | + |
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Preference number: 2 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRHIFHV*LQGKDI Trigger: AATGTCTTTACCTTGTAGGCAGACATGGAAGATATG...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTTTAAAGAAACACCACACAAGCACCAACTTCATTATGACTCAAAGCTTGAGGACAAAGGGATGTaGACTCTTCAGAAACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HFFKETPHKHQLHYDSKLEDKGM*TLQKLP Trigger: TGGAAGTTTCTGAAGAGTCCACATCCCTTTGTCCTC...AAGCTTTGAGTCATAATGAAGTTGGTGCTTGTGTGGTGTTTCTTTAAAGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR TCA 90 bp | TATAACTGCTTCAGCAAGTTCAACATCAGTACAAAGTCACAGGTATTCCAATCATTTCACACTGGAGCATaGACAAGAAAAAGCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: YNCFSKFNISTKSQVFQSFHTGA*TRKSHQ Trigger: TTGATGGCTTTTTCTTGTTCATGCTCCAGTGTGAAA...TGATTGGAATACCTGTGACTTTGTACTGATGTTGAACTTGCTGAAGCAGTTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR TCA 90 bp | TATAACTGCTTCAGCAAGTTCAACATCAGTACAAAGTCACAGGTATTCCAATCATTAAGCTGGCAATTTTaGAAAAGGCCTTACAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: YNCFSKFNISTKSQVFQSLSWQF*KRPYRV Trigger: CACTCTGTAAGGCCTTTTTCAAAATTGCCAGCTTAA...TGATTGGAATACCTGTGACTTTGTACTGATGTTGAACTTGCTGAAGCAGTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR GCA 90 bp | AAAGTACCAAAGTTACATGCGAGGATTTGTAAGGAAACAAGGGTGGTTGTCACACTAAAAGCACTGGATTaGACTGTTTCTTTACTCATA | + |
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Preference number: 2 (lower is better) Translates to: KVPKLHARICKETRVVVTLKALD*TVSLLI Trigger: TATGAGTAAAGAAACAGTGCAATCCAGTGCTTTTAG...TGTGACAACCACCCTTGTTTCCTTACAAATCCTCGCATGTAACTTTGGTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CAA 90 bp | CATTTCACATTCACAGAATCACTTGTGCAAAACAAGCAGTCTACGTaGAAAGAATGCCCTCATCGTAGTCTAATAAAAACCATAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: HFTFTESLVQNKQST*KECPHRSLIKTIGK Trigger: TTTTCCTATGGTTTTTATTAGACTACGATGAGGGCATTCTTTCAACGTAGACTGCTTGTTTTGCACAAGTGATTCTGTGAATGTGAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR CAA 90 bp | ACAACCGCACAGCAATGTCTGAACACATTTGGTGACAAGAACAATTaGCAAAAGTGGTCTAGAAATTACATTATGAATTGTTCCAACACA | + |
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Preference number: 2 (lower is better) Translates to: TTAQQCLNTFGDKNN*QKWSRNYIMNCSNT Trigger: TGTGTTGGAACAATTCATAATGTAATTTCTAGACCACTTTTGCAAATTGTTCTTGTCACCAAATGTGTTCAGACATTGCTGTGCGGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 72 bp | ATGAAACCAATATCTGCTTCCAGCTTAGTCCATCAGTaGAGCAGCACAGCCGAGGCCAGAGACCCTGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: MKPISASSLVHQ*SSTAEARDPGP Trigger: GGGCCCAGGGTCTCTGGCCTCGGCTGTGCTGCTGCACTGATGGACTAAGCTGGAAGCAGATATTGGTTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR GCA 72 bp | AGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTaGCTGACTGCACATTACTGGGCTCAAGCAGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SLMTQAQAACLN*LTAHYWAQAAE Trigger: CTCAGCTGCTTGAGCCCAGTAATGTGCAGTCAGGCAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 72 bp | GACCCTTCACCATGGATACCAGGCCTCATGTGCCTGTaGTTTACTGAGGTCTCTGACCACAAACTCGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: DPSPWIPGLMCL*FTEVSDHKLES Trigger: GGACTCGAGTTTGTGGTCAGAGACCTCAGTAAATCACAGGCACATGAGGCCTGGTATCCATGGTGAAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 72 bp | GATGGCTGCCCTCTCCTCTATCTAACTTCACTTAGCTaGAGGCTTAAACCACAGCCACGGAAGCATGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: DGCPLLYLTSLS*RLKPQPRKHES Trigger: GCTCTCATGCTTCCGTGGCTGTGGTTTAAGCCTTCAGCTAAGTGAAGTTAGATAGAGGAGAGGGCAGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTGGCTGCATTCTTAGGGTaGAGGACAAAGGGATGTGGA | + |
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Preference number: 3 (lower is better) Translates to: IFPDCKPDDPGTGCLSKLAAFLG*RTKGCG Trigger: TCCACATCCCTTTGTCCTCAACCCTAAGAATGCAGC...CAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| 3UTR TCA 72 bp | ACTGCACATTACTGGGCTCAAGCAGCTGAGTCATACTaGGCCTGTTATGGCTCCAGAACTGACTCTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TAHYWAQAAESY*ACYGSRTDSEA Trigger: TGCTTCAGAGTCAGTTCTGGAGCCATAACAGGCTCAGTATGACTCAGCTGCTTGAGCCCAGTAATGTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR GCA 72 bp | CAGACAGCAGGGCCACTCTTAGGAGACTGCTCCTCATaGCATTTCCACAGCTCAGGATCAGATAAATCATGT | + |
|
Preference number: 3 (lower is better) Translates to: QTAGPLLGDCSS*HFHSSGSDKSC Trigger: ACATGATTTATCTGATCCTGAGCTGTGGAAATGGCATGAGGAGCAGTCTCCTAAGAGTGGCCCTGCTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR CCA 72 bp | CAGCAGGCTCACAAAAAGGGCAAGCAGGAAAGCCTGTaGATTATTTCCCCAGATAGTCTGAACTCCACGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QQAHKKGKQESL*IISPDSLNSTS Trigger: TGACGTGGAGTTCAGACTATCTGGGGAAATAATCCACAGGCTTTCCTGCTTGCCCTTTTTGTGAGCCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR TCA 72 bp | GGTGGTTGTCACAAATGGCTAGAGCTAAGTCAAGAATaGGCAGTTGGCAGCAAAGGACCAAGAATGGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGCHKWLELSQE*AVGSKGPRMDL Trigger: GAGGTCCATTCTTGGTCCTTTGCTGCCAACTGCTCATTCTTGACTTAGCTCTAGCCATTTGTGACAACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR GCA 72 bp | CCATTGTCCAGCCCAGGTGTAGATGCTGCTTTCTCCTaGATATCTTCCATGTCTGCCTACAAGGTAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PLSSPGVDAAFS*ISSMSAYKVKT Trigger: TGTCTTTACCTTGTAGGCAGACATGGAAGATATGCAGGAGAAAGCAGCATCTACACCTGGGCTGGACAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR GCA 72 bp | AACCTGTCTTTCTCCATTGTCCAGCCCAGGTGTAGATaGTGCTTTCTCCTGCATATCTTCCATGTCTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: NLSFSIVQPRCR*CFLLHIFHVCL Trigger: TAGGCAGACATGGAAGATATGCAGGAGAAAGCAGCATCTACACCTGGGCTGGACAATGGAGAAAGACAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTGCCTTAACAGCAGGCTCACAAAAAGGGCAAGCAGGAAAGCCTGTGGATCCTATTTTCCTTTGGTaGTTTTTCCCTCCAAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: CTALTAGSQKGQAGKPVDPIFLW*FFPPNQ Trigger: TTGGTTTGGAGGGAAAAACAACCAAAGGAAAATAGG...ATCCACAGGCTTTCCTGCTTGCCCTTTTTGTGAGCCTGCTGTTAAGGCAGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR TCA 72 bp | GAGGGTGGTCAATCTCCTCTCTTTCACACTGGAGCATaGACAAGAAAAAGCCATCAATGGCATGCCCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: EGGQSPLFHTGA*TRKSHQWHALS Trigger: TGATAGGGCATGCCATTGATGGCTTTTTCTTGTTCATGCTCCAGTGTGAAAGAGAGGAGATTGACCACCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR GCA 72 bp | CAAATCAAAACAACTCCCAGCAGAACTGTGACCTGCTaGATTCTTAGGGTTGAGGACAAAGGGATGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: QIKTTPSRTVTC*ILRVEDKGMWT Trigger: AGTCCACATCCCTTTGTCCTCAACCCTAAGAATGCAGCAGGTCACAGTTCTGCTGGGAGTTGTTTTGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR CCA 72 bp | TGTACATTCAGCTACTACTGTCCTCCCCTTAGACCTTaGTCTGGCGATGCTGCTTTGTTGGTTTTTGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: CTFSYYCPPLRP*SGDAALLVFEH Trigger: GTGTTCAAAAACCAACAAAGCAGCATCGCCAGACCAAGGTCTAAGGGGAGGACAGTAGTAGCTGAATGTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCTGACAACAAACCCAAACCCCATGAAACCAATATCTGCTTCCAGCTTAGTAACAAGCAGTCTACGTaGAAAGAATGCCCTCATCGT | + |
|
Preference number: 3 (lower is better) Translates to: VPDNKPKPHETNICFQLSNKQST*KECPHR Trigger: ACGATGAGGGCATTCTTTCAACGTAGACTGCTTGTT...ACTAAGCTGGAAGCAGATATTGGTTTCATGGGGTTTGGGTTTGTTGTCAGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACACATTCACAGAATCACTaGTGCAAAACAAGCAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FWPPNFIFPDCKPDDPGTHSQNH*CKTSSL Trigger: TAGACTGCTTGTTTTGCACAAGTGATTCTGTGAATG...TGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR TCA 72 bp | GAGACTATCAAATCAAAACAACTCCCAGCAGAACTGTaGCCTGCTGCATTCTTAGGGTTGAGGACAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETIKSKQLPAEL*PAAFLGLRTKG Trigger: TCCCTTTGTCCTCAACCCTAAGAATGCAGCAGGTCACAGTTCTGCTGGGAGTTGTTTTGATTTGATAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR CCA 72 bp | TCACAAATGGCTAGAGCTAAGTCAAGAATGAGCAGTTaGCAGCAAAGGACCAAGAATGGACCTCTGGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQMARAKSRMSS*QQRTKNGPLVY Trigger: ATACACCAGAGGTCCATTCTTGGTCCTTTGCTGCCAACTGCTCATTCTTGACTTAGCTCTAGCCATTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCAGGGAAAGTCATATTCATCTTTATTTTGGCCCCCAAACTTCATCTTCCCGGCGATGCTGCTTTGTaGGTTTTTGAACACAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSGKVIFIFILAPKLHLPGDAAL*VFEHSA Trigger: AGCACTGTGTTCAAAAACCAACAAAGCAGCATCGCC...GGGAAGATGAAGTTTGGGGGCCAAAATAAAGATGAATATGACTTTCCCTGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCTCCTGCATATCTTCCATGTCTGCCTACAAGGTAAAGACATTATTCAACAATCCAAGCTACTGCTaGGCCTCTCCATTTCACATT | + |
|
Preference number: 3 (lower is better) Translates to: AFSCISSMSAYKVKTLFNNPSYC*ASPFHI Trigger: AATGTGAAATGGAGAGGCCAAGCAGTAGCTTGGATT...GTTGAATAATGTCTTTACCTTGTAGGCAGACATGGAAGATATGCAGGAGAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTGGTTTAGATTCTGAAAATGTAATCCCATACCTCCCTATTTTCCTTTGGAAATCGGCTCTTTATTaGGGGGAAAGGGGAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLGLDSENVIPYLPIFLWKSALY*GERGRD Trigger: GTCTCTTCCCCTTTCCCCCAAATAAAGAGCCGATTT...CCAAAGGAAAATAGGGAGGTATGGGATTACATTTTCAGAATCTAAACCAAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTACCAAAGTTACATGCGAGGATTTGTAAGGAAACAAGGGTGGTTGTCACAAACTTTGAGCTAGCCTaGAGAAGAAGACCAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: KVPKLHARICKETRVVVTNFELA*RRRPTP Trigger: AGGTGTTGGTCTTCTTCTCAAGGCTAGCTCAAAGTT...TGTGACAACCACCCTTGTTTCCTTACAAATCCTCGCATGTAACTTTGGTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR GCA 72 bp | ACTGTGGTTTCTTCTAGACACTGTCACCAAAGGAAGTaGTCAGGGAAAGTCATATTCATCTTTATTTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TVVSSRHCHQRK*SGKVIFIFILA Trigger: GGCCAAAATAAAGATGAATATGACTTTCCCTGAGCACTTCCTTTGGTGACAGTGTCTAGAAGAAACCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGAGCAAGGCTTTTAAACTaGAGGAAGCACACAACAATG | + |
|
Preference number: 3 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRARLLN*RKHTTM Trigger: CATTGTTGTGTGCTTCCTCAAGTTTAAAAGCCTTGC...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | TATAACTGCTTCAGCAAGTTCAACATCAGTACAAAGTCACAGGTATTCCAATCACCTCCCTATTTTCCTTaGGTTGTTTTTCCCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: YNCFSKFNISTKSQVFQSPPYFP*VVFPSK Trigger: TTTGGAGGGAAAAACAACCAAAGGAAAATAGGGAGG...TGATTGGAATACCTGTGACTTTGTACTGATGTTGAACTTGCTGAAGCAGTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR-3UTR CAA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGATCTAAAAGCACTGGATaGCACTGTTTCTTTACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRSKSTG*HCFFTH Trigger: ATGAGTAAAGAAACAGTGCAATCCAGTGCTTTTAGA...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR GCA 72 bp | TCACTTGTGCAAAACAAGCAGTCTACGTTGAAAGAATaGCCTCATCGTAGTCTAATAAAAACCATAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLVQNKQSTLKE*PHRSLIKTIGK Trigger: TTTTCCTATGGTTTTTATTAGACTACGATGAGGGCATTCTTTCAACGTAGACTGCTTGTTTTGCACAAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGCTTAGTCCATCAGTGCAGCAGCACAGCCGAGGCCAGAGACCCTGGGCGCAGTTTGCTATCATaGATCTCACCAAGACGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSLVHQCSSTAEARDPGRSLLS*ISPRRD Trigger: ATCACGTCTTGGTGAGATTCATGATAGCAAACTGCG...CCCAGGGTCTCTGGCCTCGGCTGTGCTGCTGCACTGATGGACTAAGCTGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCAGACTCCCTCAGACAGCAGGGCCACTCTTAGGAGACTGCTCCTCATGCTGCTTGTACTCGGTTaGTATCCTCCACAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFQTPSDSRATLRRLLLMLLVLG*YPPQTR Trigger: CCTGGTTTGTGGAGGATATCAACCGAGTACAAGCAG...CATGAGGAGCAGTCTCCTAAGAGTGGCCCTGCTGTCTGAGGGAGTCTGGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCAGACTCCCTCAGACAGCAGGGCCACTCTTAGGAGACTGCTCCTCATGCTTCACTTCCCCGTCTaGAACCACAGAACAAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: CFQTPSDSRATLRRLLLMLHFPV*NHRTSV Trigger: TACGCTTGTTCTGTGGTTGCAGACGGGGAAGTGAAG...CATGAGGAGCAGTCTCCTAAGAGTGGCCCTGCTGTCTGAGGGAGTCTGGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | CAGCCGAGGCCAGAGACCCTGGGCCCCTCATTTCTAAATCCAAGCTACTGCTTGTCTCATTCCCCTCTCTaGGAAAGCGCTCGATATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPRPETLGPSFLNPSYCLSHSPL*ESARYS Trigger: ACTATATCGAGCGCTTTCGCAGAGAGGGGAATGAGA...CAAGCAGTAGCTTGGATTTAGAAATGAGGGGCCCAGGGTCTCTGGCCTCGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR CAA 72 bp | CCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTaGTCTAAACTGCCTGACTGCACATTACTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PDCKPDDPGTGC*SKLPDCTLLGS Trigger: TGAGCCCAGTAATGTGCAGTCAGGCAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | TTTTGGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACAGAGCCGTGCTGTAGATaGCACAGTGCTTCACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FWPPNFIFPDCKPDDPGTEPCCR*HSASLP Trigger: GGGAAGTGAAGCACTGTGTCATCTACAGCACGGCTC...TGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTGCCTGAGTCATTGGCTTAGGTaGCTTTGGTGGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLIVSLMTQAQAACLNCLSHWLR*LWWKSW Trigger: CCAGCTCTTCCACCAAAGCCACCTAAGCCAATGACT...CAGGCAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR CCA 90 bp | TTAAACCACAGCCACGGAAGCATGAGAGCAGGCTGTGTGCACTGCCTTAACAGCTCCATTTGTGACTGCTaGAGTCATTGGCTTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNHSHGSMRAGCVHCLNSSICDC*SHWLRW Trigger: CCACCTAAGCCAATGACTCCAGCAGTCACAAATGGA...GCTGTTAAGGCAGTGCACACAGCCTGCTCTCATGCTTCCGTGGCTGTGGTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCAGACTCCCTCAGACAGCAGGGCCACTCTTAGGAGACTGCTCCTCATGCGTAACATCCTTTCTTaGTACTCTCACGAATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFQTPSDSRATLRRLLLMRNILS*YSHELR Trigger: TCTTAATTCGTGAGAGTAGCAAGAAAGGATGTTACG...CATGAGGAGCAGTCTCCTAAGAGTGGCCCTGCTGTCTGAGGGAGTCTGGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGGGAAAGTCATATTCATCTTTATTTTGGCCCCCAAACTTCATCTTCCCGAGCGTAGGCATCTGTaGATGGACAGGGTAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSGKVIFIFILAPKLHLPERRHL*MDRVGE Trigger: CTCGCCTACCCTGTCCATGCACAGATGCCTACGCTC...GGGAAGATGAAGTTTGGGGGCCAAAATAAAGATGAATATGACTTTCCCTGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACACATTTACCTCTTCCCTaGAAATATCTCCCCAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FWPPNFIFPDCKPDDPGTHLPLP*KYLPST Trigger: GGTACTGGGGAGATATTTCCAGGGAAGAGGTAAATG...TGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | TTTTGGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACATCCCCAGTACCACTCTaGATCTTGAAGAGAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FWPPNFIFPDCKPDDPGTSPVPL*ILKRNE Trigger: TTCATTTCTCTTCAAGATGCAGAGTGGTACTGGGGA...TGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | TATAACTGCTTCAGCAAGTTCAACATCAGTACAAAGTCACAGGTATTCCAATCACACCTCCCTCCAGTCTaGGTCATCGCGGTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: YNCFSKFNISTKSQVFQSHLPPV*VIAVHT Trigger: AGTATGGACCGCGATGACGCAGACTGGAGGGAGGTG...TGATTGGAATACCTGTGACTTTGTACTGATGTTGAACTTGCTGAAGCAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCCACAAAGTGGTTACTCAAAGGGAAAGAATATAGGACTGAAAACCTGTCAGGTTGTAGGGTTCTaGAAAGCCATATCCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPQSGYSKGKNIGLKTCQVVGF*KAISSS Trigger: GCTCGAGGATATGGCTTTGCAGAACCCTACAACCTG...ACAGGTTTTCAGTCCTATATTCTTTCCCTTTGAGTAACCACTTTGTGGGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | TCATATTCATCTTTATTTTGGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTCTGAGTCCTCATTCTTaGTCCCCAGCCAGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSSLFWPPNFIFPDCKPLSPHS*SPARHS Trigger: TGAATGCCTGGCTGGGGATCAAGAATGAGGACTCAG...AGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAATAAAGATGAATATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGGTTTAGATTCTGAAAATGTAATCCCATACCTCCCTATTTTCCTTTGGGACTGCTGGAGTCATTaGCTTAGGTGGCTTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGLDSENVIPYLPIFLWDCWSH*LRWLWW Trigger: CCACCAAAGCCACCTAAGCCAATGACTCCAGCAGTC...CCAAAGGAAAATAGGGAGGTATGGGATTACATTTTCAGAATCTAAACCAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGACAACAAACCCAAACCCCATGAAACCAATATCTGCTTCCAGCTTAGTCTTTGGTGGAAGAGCTaGAGGATCCATTTCAATATA | + |
|
Preference number: 4 (lower is better) Translates to: VPDNKPKPHETNICFQLSLWWKS*RIHFNI Trigger: TATATTGAAATGGATCCTCCAGCTCTTCCACCAAAG...ACTAAGCTGGAAGCAGATATTGGTTTCATGGGGTTTGGGTTTGTTGTCAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | TATAACTGCTTCAGCAAGTTCAACATCAGTACAAAGTCACAGGTATTCCAATCACCTTCATTCCATTTGTaGCTGCTGGAGTCATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNCFSKFNISTKSQVFQSPSFHL*LLESLA Trigger: AGCCAATGACTCCAGCAGTCACAAATGGAATGAAGG...TGATTGGAATACCTGTGACTTTGTACTGATGTTGAACTTGCTGAAGCAGTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTCCTGCATATCTTCCATGTCTGCCTACAAGGTAAAGACATTATTCAACTACCACTCTGCATCTTaGAGAGAAATGAAACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFSCISSMSAYKVKTLFNYHSAS*REMKLS Trigger: GGACAGTTTCATTTCTCTTCAAGATGCAGAGTGGTA...GTTGAATAATGTCTTTACCTTGTAGGCAGACATGGAAGATATGCAGGAGAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | AAAGTACCAAAGTTACATGCGAGGATTTGTAAGGAAACAAGGGTGGTTGTCACAGCTCAAGACGCAGTTTaGTATCATGAATCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVPKLHARICKETRVVVTAQDAV*YHESHQ Trigger: TTGGTGAGATTCATGATAGCAAACTGCGTCTTGAGC...TGTGACAACCACCCTTGTTTCCTTACAAATCCTCGCATGTAACTTTGGTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR CCA 90 bp | CATTTCTTTAAAGAAACACCACACAAGCACCAACTTCATTATGACTCAAAGCTTGCTTCACGTCGAGTTTaGGATTGTACTGAGCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HFFKETPHKHQLHYDSKLASRRV*DCTERE Trigger: CTCTCGCTCAGTACAATCCCAAACTCGACGTGAAGC...AAGCTTTGAGTCATAATGAAGTTGGTGCTTGTGTGGTGTTTCTTTAAAGAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | ATGATGTCATGGAAACCTCAAGAAGATCTAACTGGCAGTAGAGATCATCCTAGATCTTCTTTTACCAACTaGTCCTGTTGGAATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MMSWKPQEDLTGSRDHPRSSFTN*SCWNLD Trigger: ATCCAGATTCCAACAGGATCAGTTGGTAAAAGAAGA...TCTAGGATGATCTCTACTGCCAGTTAGATCTTCTTGAGGTTTCCATGACATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR GCA 90 bp | AAAGTACCAAAGTTACATGCGAGGATTTGTAAGGAAACAAGGGTGGTTGTCACAATAAAGCAAGTCCTCTaGTTGTACTCGGTTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: KVPKLHARICKETRVVVTIKQVL*LYSVDI Trigger: GATATCAACCGAGTACAAGCAGAGGACTTGCTTTAT...TGTGACAACCACCCTTGTTTCCTTACAAATCCTCGCATGTAACTTTGGTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| CDS-3UTR TCA 90 bp | TCATATTCATCTTTATTTTGGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTTGTTGTTCTTGGGTATaGCACTGCTCCTCAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: SYSSLFWPPNFIFPDCKPCCSWV*HCSSNI Trigger: AATATTTGAGGAGCAGTGTCATACCCAAGAACAACA...AGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAATAAAGATGAATATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
||
| 3UTR CAA 72 bp | TTCACAGAATCACTTGTGCAAAACAAGCAGTCTACGTaGAAAGAATGCCCTCATCGTAGTCTAATAAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: FTESLVQNKQST*KECPHRSLIKT Trigger: GGTTTTTATTAGACTACGATGAGGGCATTCTTTCAACGTAGACTGCTTGTTTTGCACAAGTGATTCTGTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS TCA 90 bp | TCCCCAGCCAGGCATTCAGGCGCCTCTGCCTCACTCCTCTGTGATTaGGCCATCGCTCGATCTCCTTCTCATTCCCCTCTCTGCGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SPARHSGASASLLCD*AIARSPSHSPLCES Trigger: GCTTTCGCAGAGAGGGGAATGAGAAGGAGATCGAGCGATGGCTCAATCACAGAGGAGTGAGGCAGAGGCGCCTGAATGCCTGGCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106490.3 |
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| CDS TCA 90 bp | TCCCCAGCCAGGCATTCAGGCGCCTCTGCCTCACTCCTCTGTGATTaGGCCATACAAGGTGCTGATCCCGGATCTTACGCAGCTGGATCA | + |
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Preference number: 5 (lower is better) Translates to: SPARHSGASASLLCD*AIQGADPGSYAAGS Trigger: TGATCCAGCTGCGTAAGATCCGGGATCAGCACCTTGTATGGCTCAATCACAGAGGAGTGAGGCAGAGGCGCCTGAATGCCTGGCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS TCA 90 bp | TTGATCCCCAGCCAGGCATTCAGGCGCCTCTGCCTCACTCCTCTGTaGTTGAGCCATCGCTCGATCTCCTTCTCATTCCCCTCTCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: LIPSQAFRRLCLTPL*LSHRSISFSFPSLR Trigger: TCGCAGAGAGGGGAATGAGAAGGAGATCGAGCGATGGCTCAATCACAGAGGAGTGAGGCAGAGGCGCCTGAATGCCTGGCTGGGGATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106490.3 |
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| CDS-3UTR CAA 90 bp | TTTTGGCCCCCAAACTTCATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACACCGGTTGTCCAAAGCTaGTTTCTTCAAGTCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: FWPPNFIFPDCKPDDPGTPVVQS*FLQVLL Trigger: GAGCAGGACTTGAAGAAACAAGCTTTGGACAACCGG...TGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGATGAAGTTTGGGGGCCAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS-3UTR CAA 90 bp | TGCACTGCCTTAACAGCAGGCTCACAAAAAGGGCAAGCAGGAAAGCCTGTGGATAAGCAAGTCCTCTGCTaGTACTCGGTTGATATCCTC | + |
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Preference number: 5 (lower is better) Translates to: CTALTAGSQKGQAGKPVDKQVLC*YSVDIL Trigger: GAGGATATCAACCGAGTACAAGCAGAGGACTTGCTT...ATCCACAGGCTTTCCTGCTTGCCCTTTTTGTGAGCCTGCTGTTAAGGCAGTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS-3UTR CAA 90 bp | ATCTTCCCTGATTGTAAGCCTGATGACCCAGGCACAGGCTGCTTGTCTAAACTGTCTGCTTGTACTCGGTaGATATCCTCCACAAACCAG | + |
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Preference number: 5 (lower is better) Translates to: IFPDCKPDDPGTGCLSKLSACTR*ISSTNQ Trigger: CTGGTTTGTGGAGGATATCAACCGAGTACAAGCAGA...CAGTTTAGACAAGCAGCCTGTGCCTGGGTCATCAGGCTTACAATCAGGGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS-3UTR CAA 90 bp | TTAAACCACAGCCACGGAAGCATGAGAGCAGGCTGTGTGCACTGCCTTAACAGCTTATCTATTTCCCGGTaGTCCAAAGCTTGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LNHSHGSMRAGCVHCLNSLSISR*SKACFF Trigger: GAAGAAACAAGCTTTGGACAACCGGGAAATAGATAA...GCTGTTAAGGCAGTGCACACAGCCTGCTCTCATGCTTCCGTGGCTGTGGTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS TCA 90 bp | CACCATCTGGTTTCCCATAAAGCAAGTCCTCTGCTTGTACTCGGTTaGTATCCTCCACAAACCAGGTTTTCTCATCATAATGCGGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: HHLVSHKASPLLVLG*YPPQTRFSHHNAAG Trigger: ACCTGCCGCATTATGATGAGAAAACCTGGTTTGTGGAGGATATCAACCGAGTACAAGCAGAGGACTTGCTTTATGGGAAACCAGATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS GCA 90 bp | TCACTTCCCCGTCTGCAACCACAGAACAAGCGTAACATCCTTTCTTaGTACTCTCACGAATTAAGAATGCACCATCTGGTTTCCCATAAA | + |
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Preference number: 5 (lower is better) Translates to: SLPRLQPQNKRNILS*YSHELRMHHLVSHK Trigger: TTTATGGGAAACCAGATGGTGCATTCTTAATTCGTGAGAGTAGCAAGAAAGGATGTTACGCTTGTTCTGTGGTTGCAGACGGGGAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS CCA 90 bp | AGAAATGAAACTGTCCTTCATTCCATTTGTGACTGCTGGAGTCATTaGCTTAGGTGGCTTTGGTGGAAGAGCTGGAGGATCCATTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: RNETVLHSICDCWSH*LRWLWWKSWRIHFN Trigger: ATTGAAATGGATCCTCCAGCTCTTCCACCAAAGCCACCTAAGCCAATGACTCCAGCAGTCACAAATGGAATGAAGGACAGTTTCATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 ENSMUST00000147292.8 |
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| CDS-3UTR CAA 90 bp | CATTTCTTTAAAGAAACACCACACAAGCACCAACTTCATTATGACTCAAAGCTTCCCCCTGCATTTTCGTaGAGGCATCACGAACTAAGA | + |
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Preference number: 5 (lower is better) Translates to: HFFKETPHKHQLHYDSKLPPAFS*RHHELR Trigger: TCTTAGTTCGTGATGCCTCAACGAAAATGCAGGGGG...AAGCTTTGAGTCATAATGAAGTTGGTGCTTGTGTGGTGTTTCTTTAAAGAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS-3UTR CAA 90 bp | CTCCTTGGTTTAGATTCTGAAAATGTAATCCCATACCTCCCTATTTTCCTTTGGGTACCACTCTGCATCTaGAAGAGAAATGAAACTGTC | + |
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Preference number: 5 (lower is better) Translates to: LLGLDSENVIPYLPIFLWVPLCI*KRNETV Trigger: GACAGTTTCATTTCTCTTCAAGATGCAGAGTGGTAC...CCAAAGGAAAATAGGGAGGTATGGGATTACATTTTCAGAATCTAAACCAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS-3UTR CAA 90 bp | TTACTATTTCCACAAAATAATTCTATTCCTCATCTGAGAAACAAGGCCAGGGCATACCAACTGATCCTGTaGGAATCTGGATACTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: LLFPQNNSIPHLRNKARAYQLIL*ESGYWV Trigger: TACCCAGTATCCAGATTCCAACAGGATCAGTTGGTA...TGCCCTGGCCTTGTTTCTCAGATGAGGAATAGAATTATTTTGTGGAAATAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS GCA 90 bp | GGTTGTCCAAAGCTTGTTTCTTCAAGTCCTGCTCAAGACGCAGTTTaGTATCATGAATCTCACCAAGACGTGATTTCAATTTATCATAAT | + |
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Preference number: 5 (lower is better) Translates to: GCPKLVSSSPAQDAV*YHESHQDVISIYHN Trigger: ATTATGATAAATTGAAATCACGTCTTGGTGAGATTCATGATAGCAAACTGCGTCTTGAGCAGGACTTGAAGAAACAAGCTTTGGACAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS-3UTR CAA 90 bp | CATTTCTTTAAAGAAACACCACACAAGCACCAACTTCATTATGACTCAAAGCTTTTTACTGTGTTGTTCTaGGGTATGACACTGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HFFKETPHKHQLHYDSKLFTVLF*GMTLLL Trigger: GAGGAGCAGTGTCATACCCAAGAACAACACAGTAAA...AAGCTTTGAGTCATAATGAAGTTGGTGCTTGTGTGGTGTTTCTTTAAAGAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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| CDS TCA 72 bp | AGGCATTCAGGCGCCTCTGCCTCACTCCTCTGTGATTaGGCCATCGCTCGATCTCCTTCTCATTCCCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RHSGASASLLCD*AIARSPSHSPL Trigger: GAGAGGGGAATGAGAAGGAGATCGAGCGATGGCTCAATCACAGAGGAGTGAGGCAGAGGCGCCTGAATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106490.3 |
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| CDS TCA 72 bp | GTTCTGCAAAGCCATATCCTCGAGCCGTGCTGTAGATaGCACAGTGCTTCACTTCCCCGTCTGCAACCACAG | + |
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Preference number: 6 (lower is better) Translates to: VLQSHILEPCCR*HSASLPRLQPQ Trigger: CTGTGGTTGCAGACGGGGAAGTGAAGCACTGTGTCATCTACAGCACGGCTCGAGGATATGGCTTTGCAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS GCA 72 bp | TTCTGTCGAATAGGGCATCATCACCTCCCTCCAGTCTaGGTCATCGCGGTCCATACTCCACACCGTATTGTA | + |
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Preference number: 6 (lower is better) Translates to: FCRIGHHHLPPV*VIAVHTPHRIV Trigger: TACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTGGAGGGAGGTGATGATGCCCTATTCGACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 ENSMUST00000147292.8 |
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| CDS GCA 72 bp | GAATGCACCATCTGGTTTCCCATAAAGCAAGTCCTCTaGTTGTACTCGGTTGATATCCTCCACAAACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ECTIWFPIKQVL*LYSVDILHKPG Trigger: ACCTGGTTTGTGGAGGATATCAACCGAGTACAAGCAGAGGACTTGCTTTATGGGAAACCAGATGGTGCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS CAA 72 bp | TGCACCATCTGGTTTCCCATAAAGCAAGTCCTCTGCTaGTACTCGGTTGATATCCTCCACAAACCAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: CTIWFPIKQVLC*YSVDILHKPGF Trigger: AAAACCTGGTTTGTGGAGGATATCAACCGAGTACAAGCAGAGGACTTGCTTTATGGGAAACCAGATGGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS GCA 72 bp | AAGAGAAATGAAACTGTCCTTCATTCCATTTGTGACTaGTGGAGTCATTGGCTTAGGTGGCTTTGGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KRNETVLHSICD*WSHWLRWLWWK Trigger: CTTCCACCAAAGCCACCTAAGCCAATGACTCCAGCAGTCACAAATGGAATGAAGGACAGTTTCATTTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 ENSMUST00000147292.8 |
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| CDS GCA 72 bp | CGTCTGCAACCACAGAACAAGCGTAACATCCTTTCTTaGTACTCTCACGAATTAAGAATGCACCATCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RLQPQNKRNILS*YSHELRMHHLV Trigger: AACCAGATGGTGCATTCTTAATTCGTGAGAGTAGCAAGAAAGGATGTTACGCTTGTTCTGTGGTTGCAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS CCA 72 bp | TTCTTTTACCAACTGATCCTGTTGGAATCTGGATACTaGGTACGTCAGCTTCACGTCGAGTTTGGGATTGTA | + |
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Preference number: 6 (lower is better) Translates to: FFYQLILLESGY*VRQLHVEFGIV Trigger: TACAATCCCAAACTCGACGTGAAGCTGACGTACCCAGTATCCAGATTCCAACAGGATCAGTTGGTAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS CAA 72 bp | TGCATCAATGTTATCTTCTTTTACCAACTGATCCTGTaGGAATCTGGATACTGGGTACGTCAGCTTCACGTC | + |
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Preference number: 6 (lower is better) Translates to: CINVIFFYQLIL*ESGYWVRQLHV Trigger: GACGTGAAGCTGACGTACCCAGTATCCAGATTCCAACAGGATCAGTTGGTAAAAGAAGATAACATTGATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS TCA 72 bp | GTTTCCCATAAAGCAAGTCCTCTGCTTGTACTCGGTTaGTATCCTCCACAAACCAGGTTTTCTCATCATAAT | + |
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Preference number: 6 (lower is better) Translates to: VSHKASPLLVLG*YPPQTRFSHHN Trigger: ATTATGATGAGAAAACCTGGTTTGTGGAGGATATCAACCGAGTACAAGCAGAGGACTTGCTTTATGGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030464.14 ENSMUST00000106490.3 |
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| CDS GCA 72 bp | AAGCTTGTTTCTTCAAGTCCTGCTCAAGACGCAGTTTaGTATCATGAATCTCACCAAGACGTGATTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: KLVSSSPAQDAV*YHESHQDVISI Trigger: AATTGAAATCACGTCTTGGTGAGATTCATGATAGCAAACTGCGTCTTGAGCAGGACTTGAAGAAACAAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030464.14 |
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