Pregenerated sensors for PIK3R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031834Ensembl transcript IDs: ENSMUST00000034296.15, ENSMUST00000143785.2, ENSMUST00000154685.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGCAGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTaGACAGTCTGGAGAACAGCGCAGGGCCTGGGCGAGGGCCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: GAGTHPGPLSQRGGD*TVWRTAQGLGEGQS Trigger: ACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTCCAGACTGTGCAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR GCA 90 bp | ACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTaGGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACA | + |
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Preference number: 1 (lower is better) Translates to: TASVNMAGAAGGMAS*ACSPGEGIWRQTWT Trigger: TGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR CCA 90 bp | TGTGCGGTAGATGACACAGTGCTTCGTGTCGCCGTCCACCCTGCGTaGCCAAAAGAGCTGCTCAGAGAAGAAGCCATGCCTGCCTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: CAVDDTVLRVAVHPA*PKELLREEAMPASP Trigger: GGGAGAGGCAGGCATGGCTTCTTCTCTGAGCAGCTCTTTTGGCCACGCAGGGTGGACGGCGACACGAAGCACTGTGTCATCTACCGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR GCA 90 bp | GAGCTGCTCAGAGAAGAAGCCATGCCTGCCTCTCCCCCTCTTCACTaGCAAGCTCAACAGAGCCTAGCACACAATGGAAATGGGTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: ELLREEAMPASPPLH*QAQQSLAHNGNGCS Trigger: TGAGCACCCATTTCCATTGTGTGCTAGGCTCTGTTGAGCTTGGCAGTGAAGAGGGGGAGAGGCAGGCATGGCTTCTTCTCTGAGCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR CAA 90 bp | GGGAGCAGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATaGCACAGTCTGGAGAACAGCGCAGGGCCTGGGCGAGGGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GSRDTPRALVPKGRR*HSLENSAGPGRGPE Trigger: CTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTCCAGACTGTGCAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGCCAGGGGAGGGGATCTaGAGACAGACATGGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: GRPGQWPHSLCKHGRRSGPGEGI*RQTWTG Trigger: CCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGG...CCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR CAA 90 bp | CTGGGCAGGTATGGGGTCCAGGGAGCAGGGACACACCCAGGGCCCTaGTCCCAAAGGGGAGGCGATTGCACAGTCTGGAGAACAGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: LGRYGVQGAGTHPGP*SQRGGDCTVWRTAQ Trigger: CTGCGCTGTTCTCCAGACTGTGCAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACCCCATACCTGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCCCAGGGGAGGGGATCTaGAGACAGACATGGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: NSGRPGQWPHSLCKHGRRPGEGI*RQTWTG Trigger: CCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGG...GCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGCTTAAGAGGGGAAGTTaGGGTCCGCGGGGCGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLRVFTRGGDLETDMDRELKRGS*GPRGGS Trigger: GGACCCGCCCCGCGGACCCCAACTTCCCCTCTTAAG...CTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACGAACAGCGCAGGGCCTaGGCGAGGGCCAGAGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: DGLLRVFTRGGDLETDMDEQRRA*ARARVC Trigger: ACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTC...GTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR CCA 90 bp | CGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCGCCGTCCACCCTGCGTaGCCAAAAGAGCTGCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RVFTRGGDLETDMDREAGAVHPA*PKELLR Trigger: TCTGAGCAGCTCTTTTGGCCACGCAGGGTGGACGGC...GCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR CAA 90 bp | TGCACAGTCTGGAGAACAGCGCAGGGCCTGGGCGAGGGCCAGAGTTaGTATTTTGCCCGCCAGAGTGGGGAAGATTCTCGGCAGCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: CTVWRTAQGLGEGQS*YFARQSGEDSRQLR Trigger: CCGCAGCTGCCGAGAATCTTCCCCACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTCCAGACTGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGCGGGGTAACCCCCTGTaGCTGGTTTCACTTCGACCT | + |
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Preference number: 2 (lower is better) Translates to: ASCACSPGEGIWRQTWTGRGNPL*LVSLRP Trigger: AGGTCGAAGTGAAACCAGTCACAGGGGGTTACCCCG...CCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR CCA 90 bp | TGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTGTTCACCAGGCCAGGCCTGAGTTCCTaGAAACCACCTAGCGCGGTT | + |
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Preference number: 2 (lower is better) Translates to: CKHGRRSGRDGLLRVFTRPGLSS*KPPSAV Trigger: AACCGCGCTAGGTGGTTTCCAGGAACTCAGGCCTGG...CCTGGTGAACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGAAGCCGGTGGCTGTGCGGTAGATGACACAGTGCTTCGTGTCGCCGTCCACTCAGAGAAGAAGCCATaGCTGCCTCTCCCCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AEAGGCAVDDTVLRVAVHSEKKP*LPLPLF Trigger: GAAGAGGGGGAGAGGCAGGCATGGCTTCTTCTCTGA...GTGGACGGCGACACGAAGCACTGTGTCATCTACCGCACAGCCACCGGCTTCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAACAGCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGCTAACCCCGGGGATATaGCTTGAAGAACTCAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: ENSAGPGRGPEFVFCPPELTPGI*LEELRA Trigger: CGCCCTGAGTTCTTCAAGCCATATCCCCGGGGTTAG...CTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAAGATTCTCGGCAGCTGCGGGGCCAGGCCTGAGTTCCTaGAAACCACCTAGCGCGGTT | + |
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Preference number: 2 (lower is better) Translates to: PEFVFCPPEWGRFSAAAGPGLSS*KPPSAV Trigger: AACCGCGCTAGGTGGTTTCCAGGAACTCAGGCCTGG...CCCCGCAGCTGCCGAGAATCTTCCCCACTCTGGCGGGCAAAATACAAACTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR-3UTR CCA 90 bp | CGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCGTAACCCCCTGTGACTaGTTTCACTTCGACCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: RVFTRGGDLETDMDREAGVTPCD*FHFDLK Trigger: CTTAAGGTCGAAGTGAAACCAGTCACAGGGGGTTAC...GCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR GCA 72 bp | GGACAGGGAGGCAGGCGAGGTGGGCGCTCAGCGTGCTaGAGACGGTGGGCCAGGCCCGGGGGCACGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: GQGGRRGGRSAC*RRWARPGGTHR Trigger: CCTGTGCGTGCCCCCGGGCCTGGCCCACCGTCTGCAGCACGCTGAGCGCCCACCTCGCCTGCCTCCCTGTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR GCA 72 bp | CATGGACAGGGAGGCAGGCGAGGTGGGCGCTCAGCGTaGTGCAGACGGTGGGCCAGGCCCGGGGGCACGCAC | + |
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Preference number: 3 (lower is better) Translates to: HGQGGRRGGRSA*CRRWARPGGTH Trigger: GTGCGTGCCCCCGGGCCTGGCCCACCGTCTGCAGCACGCTGAGCGCCCACCTCGCCTGCCTCCCTGTCCATG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR TCA 72 bp | CGGGGCGGGTCCCGCCCGGCCCCGAGTGTCCAGGCCTaGGTTCCTGGAAACCACCTAGCGCGGTTCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: RGGSRPAPSVQA*VPGNHLARFLS Trigger: AGAAAGGAACCGCGCTAGGTGGTTTCCAGGAACTCAGGCCTGGACACTCGGGGCCGGGCGGGACCCGCCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR GCA 72 bp | AGACGGTGGGCCAGGCCCGGGGGCACGCACAGGGTGTaGGAGGGTGACGGTAAGTGCGTCATTGTGCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: RRWARPGGTHRV*EGDGKCVIVLH Trigger: GTGCAGCACAATGACGCACTTACCGTCACCCTCGCACACCCTGTGCGTGCCCCCGGGCCTGGCCCACCGTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR CCA 72 bp | ATCTGGAGACAGACATGGACAGGGAGGCAGGCGAGGTaGGCGCTCAGCGTGCTGCAGACGGTGGGCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: IWRQTWTGRQAR*ALSVLQTVGQA Trigger: GGCCTGGCCCACCGTCTGCAGCACGCTGAGCGCCCACCTCGCCTGCCTCCCTGTCCATGTCTGTCTCCAGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCCCCCGGGGATATGGCTaGAAGAACTCAGGGCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SGPTASVNMAGAAGGMASPRGYG*KNSGRP Trigger: TGGGCGCCCTGAGTTCTTCAAGCCATATCCCCGGGG...GGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR-3UTR CAA 90 bp | AACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCCCCCGGGGATATGGCTaGAAGAACTCAGGGCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: NSGRPGQWPHSLCKHGRRPRGYG*KNSGRP Trigger: TGGGCGCCCTGAGTTCTTCAAGCCATATCCCCGGGG...GCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR GCA 72 bp | GTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTaGGCGTGTTCACCAGGGGAGGGGATCTGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: VNMAGAAGGMAS*ACSPGEGIWRQ Trigger: CTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR GCA 72 bp | ACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTaGACAGTCTGGAGAACAGCGCAGGGCCTGGGCGAG | + |
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Preference number: 3 (lower is better) Translates to: THPGPLSQRGGD*TVWRTAQGLGE Trigger: CTCGCCCAGGCCCTGCGCTGTTCTCCAGACTGTGCAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR CCA 72 bp | ATGGCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTaGAGACAGACATGGACAGGGAGGCAGGCGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: MASCACSPGEGI*RQTWTGRQARW Trigger: CCACCTCGCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR CCA 72 bp | GTACAAAACCTGCTGCCCATCCGCCCTGGGCAGGTATaGGGTCCAGGGAGCAGGGACACACCCAGGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: VQNLLPIRPGQV*GPGSRDTPRAL Trigger: AAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACCCCATACCTGCCCAGGGCGGATGGGCAGCAGGTTTTGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR CCA 72 bp | GGATATGGCTTGAAGAACTCAGGGCGCCCAGGCCAGTaGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GYGLKNSGRPGQ*PHSLCKHGRRS Trigger: GCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTTCTTCAAGCCATATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| 3UTR CCA 72 bp | GAGGCGATTGCACAGTCTGGAGAACAGCGCAGGGCCTaGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: EAIAQSGEQRRA*ARARVCILPAR Trigger: TCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTCCAGACTGTGCAATCGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR GCA 72 bp | GTGGCCAAAAGAGCTGCTCAGAGAAGAAGCCATGCCTaGCTCTCCCCCTCTTCACTGCCAAGCTCAACAGAG | + |
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Preference number: 3 (lower is better) Translates to: VAKRAAQRRSHA*LSPSSLPSSTE Trigger: CTCTGTTGAGCTTGGCAGTGAAGAGGGGGAGAGGCAGGCATGGCTTCTTCTCTGAGCAGCTCTTTTGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| 3UTR GCA 72 bp | TTCATATTCGTATCAATAAATGTACCGTACAAAACCTaGTGCCCATCCGCCCTGGGCAGGTATGGGGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: FIFVSINVPYKT*CPSALGRYGVQ Trigger: CTGGACCCCATACCTGCCCAGGGCGGATGGGCAGCAGGTTTTGTACGGTACATTTATTGATACGAATATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR CCA 72 bp | TCTTCACTGCCAAGCTCAACAGAGCCTAGCACACAATaGAAATGGGTGCTCAATGCACACAATGGATTCGCA | + |
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Preference number: 3 (lower is better) Translates to: SSLPSSTEPSTQ*KWVLNAHNGFA Trigger: TGCGAATCCATTGTGTGCATTGAGCACCCATTTCCATTGTGTGCTAGGCTCTGTTGAGCTTGGCAGTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| CDS-3UTR CCA 90 bp | CAGGCGAGGTGGGCGCTCAGCGTGCTGCAGACGGTGGGCCAGGCCCGGGGGCACCACGTGCGCTCCTCGTaGTGGGGGAGGGCGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QARWALSVLQTVGQARGHHVRSS*WGRASS Trigger: TGAGGACGCCCTCCCCCACCACGAGGAGCGCACGTG...GTGCCCCCGGGCCTGGCCCACCGTCTGCAGCACGCTGAGCGCCCACCTCGCCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| CDS-3UTR TCA 90 bp | GGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGGTCGGGTGCGCTCGTTaGAGCCAGGCATCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRPGQWPHSLCKHGRRSGVGCAR*SQASSP Trigger: TGGGCTGGATGCCTGGCTTCAACGAGCGCACCCGAC...CCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS-3UTR GCA 90 bp | GGGCCAGGCCCGGGGGCACGCACAGGGTGTGCGAGGGTGACGGTAAGTGCGTCATGCCCACGTACCACGTaGGCTCCTCGTGGTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GPGPGARTGCARVTVSASCPRTT*APRGGG Trigger: TCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCA...TGACGCACTTACCGTCACCCTCGCACACCCTGTGCGTGCCCCCGGGCCTGGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| CDS-3UTR CCA 90 bp | CCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTGCGCTCCTCGTGGTaGGGGAGGGCGTCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: PHSLCKHGRRSGRDGLLRVRSSW*GRASSS Trigger: GGATGAGGACGCCCTCCCCCACCACGAGGAGCGCAC...GCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| CDS-3UTR GCA 90 bp | CTCAGCGTGCTGCAGACGGTGGGCCAGGCCCGGGGGCACGCACAGGGTGTGCGAAGGTCCCGTCTCGTTTaGCACTCAGCATCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LSVLQTVGQARGHAQGVRRSRLV*HSASPP Trigger: CGGAGGAGATGCTGAGTGGCAAACGAGACGGGACCT...TCGCACACCCTGTGCGTGCCCCCGGGCCTGGCCCACCGTCTGCAGCACGCTGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
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| CDS-3UTR CCA 90 bp | GGGATATGGCTTGAAGAACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGGTGCAGCGGCAGTGTTaGGGGTTCCAGCACCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GIWLEELRAPRPVAPQPLVQRQC*GFQHQP Trigger: GGGCTGGTGCTGGAACCCCCAACACTGCCGCTGCAC...CAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTTCTTCAAGCCATATCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS-3UTR CCA 90 bp | GAGAACAGCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGGTGCGCTCCTCGTGGTaGGGGAGGGCGTCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: ENSAGPGRGPEFVFCPPEVRSSW*GRASSS Trigger: GGATGAGGACGCCCTCCCCCACCACGAGGAGCGCAC...CTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS-3UTR CCA 90 bp | GAGAACAGCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGCACGTGCGCTCCTCGTaGTGGGGGAGGGCGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ENSAGPGRGPEFVFCPPEHVRSS*WGRASS Trigger: TGAGGACGCCCTCCCCCACCACGAGGAGCGCACGTG...CTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| 3UTR CAA 72 bp | GACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATaGCACAGTCTGGAGAACAGCGCAGGGCCTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: DTPRALVPKGRR*HSLENSAGPGR Trigger: TCGCCCAGGCCCTGCGCTGTTCTCCAGACTGTGCAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS-3UTR TCA 90 bp | CCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTTGTACTGGGCCAGTaGTTCGTGGCGGTAGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PHSLCKHGRRSGRDGLLRVVLGQ*FVAVVG Trigger: TCCCACTACCGCCACGAATCACTGGCCCAGTACAAC...GCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS-3UTR TCA 90 bp | TCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTGTTCACCAGCTGGTGGTAGACCTTaGGCTGGGCGCCCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SVNMAGAAGGMASCACSPAGGRP*AGRPQP Trigger: AGGCTGTGGGCGCCCAGCTCAAGGTCTACCACCAGC...TGGTGAACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS-3UTR TCA 90 bp | CGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCCCGCCTGTGTGCGGTTaGTCTTGCCCACGTACCACG | + |
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Preference number: 4 (lower is better) Translates to: RVFTRGGDLETDMDREAGPPVCG*SCPRTT Trigger: CGTGGTACGTGGGCAAGATCAACCGCACACAGGCGG...GCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| CDS-3UTR GCA 90 bp | CGTACAAAACCTGCTGCCCATCCGCCCTGGGCAGGTATGGGGTCCAGGGAGCAGCACCACCACGGAGCATaGGTAACAGCCCCGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RTKPAAHPPWAGMGSREQHHHGA*VTAPLA Trigger: AGCCAGCGGGGCTGTTACGCATGCTCCGTGGTGGTG...CTGCTCCCTGGACCCCATACCTGCCCAGGGCGGATGGGCAGCAGGTTTTGTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS-3UTR TCA 90 bp | CGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCCCGCGATGCGAGACTTaGGTCGCTCGGAGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVFTRGGDLETDMDREAGPRCET*VARSSA Trigger: TGCTGAACTCCGAGCGACTCAAGTCTCGCATCGCGG...GCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR TCA 90 bp | AACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCTGGCTGTGCGGTAGATaGCACAGTGCTTCGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGRPGQWPHSLCKHGRRWLCGR*HSASCR Trigger: GCGACACGAAGCACTGTGTCATCTACCGCACAGCCA...GCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | GATGGCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACCCGGTACGCCTCTGCTaGAGCTTCAGGGGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DGLLRVFTRGGDLETDMDPVRLC*SFRGHH Trigger: GTGGTGACCCCTGAAGCTGCAGCAGAGGCGTACCGG...GTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | CGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCCAGGTTATAGGGCTCTaGGAAGCCGAAGCCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVFTRGGDLETDMDREAGQVIGL*EAEAGG Trigger: GCCACCGGCTTCGGCTTCGCAGAGCCCTATAACCTG...GCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | GCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCGTCACACCACGGAGCATaGGTAACAGCCCCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACSPGEGIWRQTWTGRQASHHGA*VTAPLA Trigger: AGCCAGCGGGGCTGTTACGCATGCTCCGTGGTGTGA...CGCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTGTTCACCACCGCTCCCGGCGGAATaGGTACACAGCCCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SVNMAGAAGGMASCACSPPLPAE*VHSPVL Trigger: CAGTACAGGGCTGTGTACCCATTCCGCCGGGAGCGG...TGGTGAACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | GAGAACAGCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGGGGAGCAGGGTCAGGTaGGGAGAACTGCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENSAGPGRGPEFVFCPPEGSRVR*GELLCQ Trigger: CTGGCAGAGCAGTTCTCCCCACCTGACCCTGCTCCC...CTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | CGTACAAAACCTGCTGCCCATCCGCCCTGGGCAGGTATGGGGTCCAGGGAGCAGGGCGTGTGTCCAGCTTaGCGTTGTACTGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTKPAAHPPWAGMGSREQGVCPA*RCTGPV Trigger: CACTGGCCCAGTACAACGCCAAGCTGGACACACGCC...CTGCTCCCTGGACCCCATACCTGCCCAGGGCGGATGGGCAGCAGGTTTTGTACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | AGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCAGCCACACGAGGTACTaGTCCCTGATCTTGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPTASVNMAGAAGGMASSHTRY*SLILRS Trigger: GCTGCGCAAGATCAGGGACCAGTACCTCGTGTGGCT...GGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR TCA 90 bp | GGGTCCAGGGAGCAGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTTTCCCAGCCATTCGTTaGTCTTCCTCTGTCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSREQGHTQGPCPKGEAIFPAIR*SSSVGH Trigger: GTGCCCGACAGAGGAAGATCAACGAATGGCTGGGAA...AATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR TCA 90 bp | AGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCATTGTGCTGCACGAGTaGTGCGTGCTGGTAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGPTASVNMAGAAGGMASIVLHE*CVLVVQ Trigger: CTGCACTACCAGCACGCATCACTCGTGCAGCACAAT...GGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | GCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAATCAGGTGGGGAGAACTaGTCTGCCAGGTCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQGLGEGQSLYFARQSGESGGEN*SARSGS Trigger: ACTCCCAGACCTGGCAGAGCAGTTCTCCCCACCTGA...TTCCCCACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGTGCGCCCGCAGATCCTaGTCCAACTTCGTGCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRVFTRGGDLETDMDRECARRS*SNFVRL Trigger: AAGCCGCACGAAGTTGGAGCAGGATCTGCGGGCGCA...CTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | GCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAAGATTCTCGGCAGCTGCCCACGTACCACGTaGGCTCCTCGTGGTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARARVCILPARVGKILGSCPRTT*APRGGG Trigger: TCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCA...GCTGCCGAGAATCTTCCCCACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAGGGAGCAGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTGAGGGTGACGGTAAGTaGGTCATTGTGCTGCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSREQGHTQGPCPKGEAIEGDGK*VIVLHE Trigger: CTCGTGCAGCACAATGACGCACTTACCGTCACCCTC...AATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| 3UTR CAA 72 bp | TATGGGGTCCAGGGAGCAGGGACACACCCAGGGCCCTaGTCCCAAAGGGGAGGCGATTGCACAGTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YGVQGAGTHPGP*SQRGGDCTVWR Trigger: TCTCCAGACTGTGCAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACCCCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR TCA 90 bp | CCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAAGATTCTCGGCAGCTGCGGGGCCGCCTGTGTGCGGTTaGTCTTGCCCACGTACCACG | + |
|
Preference number: 4 (lower is better) Translates to: PEFVFCPPEWGRFSAAAGPPVCG*SCPRTT Trigger: CGTGGTACGTGGGCAAGATCAACCGCACACAGGCGG...CCCCGCAGCTGCCGAGAATCTTCCCCACTCTGGCGGGCAAAATACAAACTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | CGTACAAAACCTGCTGCCCATCCGCCCTGGGCAGGTATGGGGTCCAGGGAGCAGTGGGGAGAACTGCTCTaGCAGGTCTGGGAGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTKPAAHPPWAGMGSREQWGELL*QVWEYV Trigger: CACATACTCCCAGACCTGGCAGAGCAGTTCTCCCCA...CTGCTCCCTGGACCCCATACCTGCCCAGGGCGGATGGGCAGCAGGTTTTGTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | GCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAAGATTCTCGGCAGCGGCCAGAGCTGTGGGTaGCGGCTTTGCCTTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARARVCILPARVGKILGSGQSCG*RLCLRG Trigger: CCCTCTAAGGCAAAGCCGGCACCCACAGCTCTGGCC...GCTGCCGAGAATCTTCCCCACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | CGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCAGGCCTCTATGGCTGTaGGCTTCATCTGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVFTRGGDLETDMDREAGRPLWL*ASSAAP Trigger: AGGAGCTGCAGATGAAGCGCACAGCCATAGAGGCCT...GCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | GAACAGCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGTGTGTCGGGCACCTTTCTaGGTGAGCCACACGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EQRRAWARARVCILPARVCRAPF*VSHTRY Trigger: GTACCTCGTGTGGCTCACCCAGAAAGGTGCCCGACA...CACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGCTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR TCA 90 bp | CGTACAAAACCTGCTGCCCATCCGCCCTGGGCAGGTATGGGGTCCAGGGAGCAGCCCGGTGGAAGACTTTaGTCAACTTGTTGTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RTKPAAHPPWAGMGSREQPGGRL*STCCSR Trigger: GCGGGAACAACAAGTTGATCAAAGTCTTCCACCGGG...CTGCTCCCTGGACCCCATACCTGCCCAGGGCGGATGGGCAGCAGGTTTTGTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCTTCACTGTCCAGCTCTaGTTGCTCAATGGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSGRPGQWPHSLCKHGRRFTVQL*LLNGFH Trigger: GTGGAAGCCATTGAGCAAGCAGAGCTGGACAGTGAA...GCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | CGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCGCTCTGCTTGCTCAATaGCTTCCACCAGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVFTRGGDLETDMDREAGALLAQ*LPPASP Trigger: TGGTGAAGCTGGTGGAAGCCATTGAGCAAGCAGAGC...GCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | AACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCCATTTCTCCTGTGTCTaGCCCTGCTCTTCGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NSGRPGQWPHSLCKHGRRHFSCV*PCSSKI Trigger: GATCTTCGAAGAGCAGGGCCAGACACAGGAGAAATG...GCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | TATGGCTTGAAGAACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGTAAAAGGTCCCGTCTCGTTTaGCACTCAGCATCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YGLKNSGRPGQWPHSLCKRSRLV*HSASPP Trigger: CGGAGGAGATGCTGAGTGGCAAACGAGACGGGACCT...TTTACAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTTCTTCAAGCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS-3UTR GCA 90 bp | AGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTGCACAGTCTGGAGTCCTGTGTCTGGCCCTaGTCTTCGAAGATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RDTPRALVPKGRRLHSLESCVWP*SSKILM Trigger: CATCAAGATCTTCGAAGAGCAGGGCCAGACACAGGA...CTCCAGACTGTGCAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | GGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCTATTCTTCATACAGCTaGTCATATTCGCGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQWPHSLCKHGRRSGRDGYSSYS*SYSRLL Trigger: CAAGAGCCGCGAATATGACCAGCTGTATGAAGAATA...GCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGAGCGTGTACTCTCCTTaGATCTTGCTGGATGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRVFTRGGDLETDMDRESVYSP*ILLDAS Trigger: AGATGCATCCAGCAAGATCCAAGGAGAGTACACGCT...CTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR GCA 90 bp | GCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAAGATTCTCGGCAGCGCTCCAAATACTCCTTaGTGCATTTCTCCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARARVCILPARVGKILGSAPNTP*CISPVS Trigger: AGACACAGGAGAAATGCAGCAAGGAGTATTTGGAGC...GCTGCCGAGAATCTTCCCCACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CCA 90 bp | CCAACAGGTACAATGTTTCATATTCGTATCAATAAATGTACCGTACAAAACCTGAGGTCTGGGAGTATGTaGCCTGACTCAGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTGTMFHIRINKCTVQNLRSGSM*PDSEDP Trigger: TGGATCTTCTGAGTCAGGCCACATACTCCCAGACCT...CAGGTTTTGTACGGTACATTTATTGATACGAATATGAAACATTGTACCTGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | CAGCGTGCTGCAGACGGTGGGCCAGGCCCGGGGGCACGCACAGGGTGTGCGAGGTCCGCCTGTGTGCGGTaGATCTTGCCCACGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRAADGGPGPGARTGCARSACVR*ILPTYH Trigger: GTGGTACGTGGGCAAGATCAACCGCACACAGGCGGA...CCTCGCACACCCTGTGCGTGCCCCCGGGCCTGGCCCACCGTCTGCAGCACGCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGGGAGCAGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTGGGTGCAGCGGCAGTGTaGGGGGTTCCAGCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGSRDTPRALVPKGRRLGAAAV*GVPAPA Trigger: GGCTGGTGCTGGAACCCCCAACACTGCCGCTGCACC...CAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GGGATATGGCTTGAAGAACTCAGGGCGCCCAGGCCAGTGGCCCCACAGCCTCTGGGCGGGCTCCCTCCATaGGCCAGAGCTGTGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GIWLEELRAPRPVAPQPLGGLPP*ARAVGA Trigger: GGCACCCACAGCTCTGGCCAATGGAGGGAGCCCGCC...CAGAGGCTGTGGGGCCACTGGCCTGGGCGCCCTGAGTTCTTCAAGCCATATCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 90 bp | GCCACACGACCCAGGTGTTGCAGCAGGAAACGCAGTGTGAGAGCCTaGTGCAGCGGCAGTGTTGGGGGTTCCAGCACCAGCCCCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATRPRCCSRKRSVRA*CSGSVGGSSTSPTG Trigger: CCCCGTGGGGCTGGTGCTGGAACCCCCAACACTGCCGCTGCACCAGGCTCTCACACTGCGTTTCCTGCTGCAACACCTGGGTCGTGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | CCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGGCATCCAGCCCACATaGTGTGGGCAGCGCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHSLCKHGRRSGRDGLLRGIQPT*CGQRSP Trigger: AGGAGAGCGCTGCCCACACAATGTGGGCTGGATGCC...GCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GGGTCCAGGGAGCAGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTTTGTCGATCTCACGGTaGTCGGAGGCCTGCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSREQGHTQGPCPKGEAILSISR*SEACAR Trigger: GCGGGCGCAGGCCTCCGACAACCGTGAGATCGACAA...AATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS TCA 90 bp | CCACGTATGTCCCGGGGAAGTCCCCTCGCTGTCGGGTGCGCTCGTTaGAGCCAGGCATCCAGCCCACATTGTGTGGGCAGCGCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRMSRGSPLAVGCAR*SQASSPHCVGSALL Trigger: GAGGAGAGCGCTGCCCACACAATGTGGGCTGGATGCCTGGCTTCAACGAGCGCACCCGACAGCGAGGGGACTTCCCCGGGACATACGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | ACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTGTTGTCGGGTGCGCTCGTaGAAGCCAGGCATCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TASVNMAGAAGGMASCACCRVRS*KPGIQP Trigger: GGGCTGGATGCCTGGCTTCAACGAGCGCACCCGACA...ACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS TCA 90 bp | TCCCGTCTCGTTTGCCACTCAGCATCTCCTCCGCCTGTGTGCGGTTaGTCTTGCCCACGTACCACGTGCGCTCCTCGTGGTGGGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLVCHSASPPPVCG*SCPRTTCAPRGGGG Trigger: CCCTCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTGAGTGGCAAACGAGACGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS-3UTR CAA 90 bp | GGCCAGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCGTGTCCAGCTTGGCGTaGTACTGGGCCAGTGATTCG | + |
|
Preference number: 5 (lower is better) Translates to: GQWPHSLCKHGRRSGRDGVSSLA*YWASDS Trigger: CGAATCACTGGCCCAGTACAACGCCAAGCTGGACAC...GCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | AGTGGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGTGTGCGGTTGATCTaGCCCACGTACCACGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGPTASVNMAGAAGGMASCVRLI*PTYHVR Trigger: GCGCACGTGGTACGTGGGCAAGATCAACCGCACACA...GGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS GCA 90 bp | GCTGTATCTGGCGAGGGTGCTCTGCGGGCCACACGACCCAGGTGTTaGAGCAGGAAACGCAGTGTGAGAGCCTGGTGCAGCGGCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVSGEGALRATRPRC*SRKRSVRAWCSGSV Trigger: AACACTGCCGCTGCACCAGGCTCTCACACTGCGTTTCCTGCTGCAACACCTGGGTCGTGTGGCCCGCAGAGCACCCTCGCCAGATACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GGCCCCACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCACTGTCCAGCTCTGCTaGCTCAATGGCTTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPTASVNMAGAAGGMASCTVQLC*LNGFHQ Trigger: CTGGTGGAAGCCATTGAGCAAGCAGAGCTGGACAGT...GCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGTGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAAAGGCGTGTGTCCAGCTaGGCGTTGTACTGGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQGLGEGQSLYFARQSGERRVSS*ALYWAS Trigger: ACTGGCCCAGTACAACGCCAAGCTGGACACACGCCT...TTCCCCACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGTGTGTGCGGTTGATCTaGCCCACGTACCACGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASCACSPGEGIWRQTWTGCVRLI*PTYHVR Trigger: GCGCACGTGGTACGTGGGCAAGATCAACCGCACACA...CCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS GCA 90 bp | CGCTTGTCGATCTCACGGTTGTCGGAGGCCTGCGCCCGCAGATCCTaGTCCAACTTCGTGCGGCTTTCGTGTATCTCCGCGATGCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLSISRLSEACARRS*SNFVRLSCISAMRD Trigger: GTCTCGCATCGCGGAGATACACGAAAGCCGCACGAAGTTGGAGCAGGATCTGCGGGCGCAGGCCTCCGACAACCGTGAGATCGACAAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 90 bp | GCCTGTGTGCGGTTGATCTTGCCCACGTACCACGTGCGCTCCTCGTaGTGGGGGAGGGCGTCCTCATCCTCCATCAGTGAATACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACVRLILPTYHVRSS*WGRASSSSISEYWS Trigger: GGACCAGTATTCACTGATGGAGGATGAGGACGCCCTCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS-3UTR CAA 90 bp | TGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGTCCGCGATGCGAGACTaGAGTCGCTCGGAGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CACSPGEGIWRQTWTGRQSAMRD*SRSEFS Trigger: GCTGAACTCCGAGCGACTCAAGTCTCGCATCGCGGA...CTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGGGAGCAGGGACACACCCAGGGCCCTTGTCCCAAAGGGGAGGCGATTGTACTGGTCCCTGATCTaGCGCAGCTGCATGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPGSRDTPRALVPKGRRLYWSLI*RSCMRS Trigger: TGACCTCATGCAGCTGCGCAAGATCAGGGACCAGTA...CAATCGCCTCCCCTTTGGGACAAGGGCCCTGGGTGTGTCCCTGCTCCCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGTCCGCCTGTGTGCGGTaGATCTTGCCCACGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLRVFTRGGDLETDMDRESACVR*ILPTYH Trigger: GTGGTACGTGGGCAAGATCAACCGCACACAGGCGGA...CTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS-3UTR CAA 90 bp | GCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGGCGAAGGTCCCGTCTCGTTaGCCACTCAGCATCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACSPGEGIWRQTWTGRQAKVPSR*PLSISS Trigger: GGAGGAGATGCTGAGTGGCAAACGAGACGGGACCTT...CGCCTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS GCA 90 bp | GCGGTCCCACTGCTCCAAGTCACTCAGGGACCAGTCTGTCCGTGTTaGGGGCAGCTCCGGCTTACTGTAGCATTCACTGTCCAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVPLLQVTQGPVCPC*GQLRLTVAFTVQLC Trigger: GCAGAGCTGGACAGTGAATGCTACAGTAAGCCGGAGCTGCCCGCAACACGGACAGACTGGTCCCTGAGTGACTTGGAGCAGTGGGACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 90 bp | AGCAGGAAGCCCTTAACAGCATCATACAAGGCGGTGCGGTCCCACTaGTCCAAGTCACTCAGGGACCAGTCTGTCCGTGTTGCGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKPLTASYKAVRSH*SKSLRDQSVRVAGS Trigger: GCTGCCCGCAACACGGACAGACTGGTCCCTGAGTGACTTGGAGCAGTGGGACCGCACCGCCTTGTATGATGCTGTTAAGGGCTTCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 90 bp | AAGTGCCCGGTACGCCTCTGCTGCAGCTTCAGGGGTCACCACAGCTaGAGGCAACGCCAGCAGGAAGCCCTTAACAGCATCATACAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KCPVRLCCSFRGHHS*RQRQQEALNSIIQG Trigger: GCCTTGTATGATGCTGTTAAGGGCTTCCTGCTGGCGTTGCCTGCAGCTGTGGTGACCCCTGAAGCTGCAGCAGAGGCGTACCGGGCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 90 bp | CTTCACCAGAATCGGGGGAGCAGGGTCAGGTGGGGAGAACTGCTCTaGCAGGTCTGGGAGTATGTGGCCACAAGGAATCTGCAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHQNRGSRVRWGELL*QVWEYVATRNLQAQ Trigger: CTGGGCTTGCAGATTCCTTGTGGCCACATACTCCCAGACCTGGCAGAGCAGTTCTCCCCACCTGACCCTGCTCCCCCGATTCTGGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154685.2 |
||
| CDS CCA 90 bp | TGTGTGCGGTTGATCTTGCCCACGTACCACGTGCGCTCCTCGTGGTaGGGGAGGGCGTCCTCATCCTCCATCAGTGAATACTGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CVRLILPTYHVRSSW*GRASSSSISEYWSS Trigger: TGAGGACCAGTATTCACTGATGGAGGATGAGGACGCCCTCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS-3UTR CAA 90 bp | GCGCAGGGCCTGGGCGAGGGCCAGAGTTTGTATTTTGCCCGCCAGAGTGGGGAAGAGCGTGTACTCTCCTaGGATCTTGCTGGATGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AQGLGEGQSLYFARQSGEERVLS*DLAGCI Trigger: GATGCATCCAGCAAGATCCAAGGAGAGTACACGCTC...TTCCCCACTCTGGCGGGCAAAATACAAACTCTGGCCCTCGCCCAGGCCCTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGTCATATTCGCGGCTCTaGTCCTGGTACTGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WPPARVHQGRGSGDRHGQSYSRL*SWYCWW Trigger: CCACCAGCAGTACCAGGACAAGAGCCGCGAATATGA...CTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGAGGCTGTTCATGCGCTaGTCGATCTCACGGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WPPARVHQGRGSGDRHGQRLFMR*SISRLS Trigger: CGACAACCGTGAGATCGACAAGCGCATGAACAGCCT...CTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | ACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTGTTGCATGAGGTCAGGTTaGAGGCTGTTCATGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TASVNMAGAAGGMASCACCMRSG*RLFMRL Trigger: CAAGCGCATGAACAGCCTCAAACCTGACCTCATGCA...ACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS TCA 90 bp | GGTCATATTCGCGGCTCTTGTCCTGGTACTGCTGGTGGTAGACCTTaGGCTGGGCGCCCACAGCCTCTATGCTGTCCTCCTTCACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GHIRGSCPGTAGGRP*AGRPQPLCCPPSPP Trigger: AGGTGGTGAAGGAGGACAGCATAGAGGCTGTGGGCGCCCAGCTCAAGGTCTACCACCAGCAGTACCAGGACAAGAGCCGCGAATATGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 90 bp | TTGAGGCTGTTCATGCGCTTGTCGATCTCACGGTTGTCGGAGGCCTaGGCCCGCAGATCCTGCTCCAACTTCGTGCGGCTTTCGTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: LRLFMRLSISRLSEA*ARRSCSNFVRLSCI Trigger: GATACACGAAAGCCGCACGAAGTTGGAGCAGGATCTGCGGGCGCAGGCCTCCGACAACCGTGAGATCGACAAGCGCATGAACAGCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GTCCCAAAGGGGAGGCGATTGCACAGTCTGGAGAACAGCGCAGGGCCTGGGCGATCCCGGTGGAAGACTTaGATCAACTTGTTGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VPKGRRLHSLENSAGPGRSRWKT*INLLFP Trigger: CGGGAACAACAAGTTGATCAAAGTCTTCCACCGGGA...TCGCCCAGGCCCTGCGCTGTTCTCCAGACTGTGCAATCGCCTCCCCTTTGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | ACAGCCTCTGTAAACATGGCAGGCGCAGCGGGAGGGATGGCCTCCTGCGCGTGTATCTTGATGGTCTCGTaGAAGGCCTCTATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TASVNMAGAAGGMASCACILMVS*KASMAV Trigger: CACAGCCATAGAGGCCTTCAACGAGACCATCAAGAT...ACACGCGCAGGAGGCCATCCCTCCCGCTGCGCCTGCCATGTTTACAGAGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GTGCTTCGTGTCGCCGTCCACCCTGCGTGGCCAAAAGAGCTGCTCAGAGAAGAAAAGGTCCCGTCTCGTTaGCCACTCAGCATCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLRVAVHPAWPKELLREEKVPSR*PLSISS Trigger: GGAGGAGATGCTGAGTGGCAAACGAGACGGGACCTT...TTCTTCTCTGAGCAGCTCTTTTGGCCACGCAGGGTGGACGGCGACACGAAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143785.2 |
||
| CDS TCA 90 bp | CGTGCGCTCCTCGTGGTGGGGGAGGGCGTCCTCATCCTCCATCAGTaGATACTGGTCCTCAGTCTCGTTCTTGATTCCCAGCCATTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: RALLVVGEGVLILHQ*ILVLSLVLDSQPFV Trigger: AACGAATGGCTGGGAATCAAGAACGAGACTGAGGACCAGTATTCACTGATGGAGGATGAGGACGCCCTCCCCCACCACGAGGAGCGCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS GCA 90 bp | TGTTGCGGGCAGCTCCGGCTTACTGTAGCATTCACTGTCCAGCTCTaGTTGCTCAATGGCTTCCACCAGCTTCACCAGAATCGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCGQLRLTVAFTVQL*LLNGFHQLHQNRGS Trigger: GCTCCCCCGATTCTGGTGAAGCTGGTGGAAGCCATTGAGCAAGCAGAGCTGGACAGTGAATGCTACAGTAAGCCGGAGCTGCCCGCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 90 bp | TTGATTCCCAGCCATTCGTTGATCTTCCTCTGTCGGGCACCTTTCTaGGTGAGCCACACGAGGTACTGGTCCCTGATCTTGCGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LIPSHSLIFLCRAPF*VSHTRYWSLILRSC Trigger: GCAGCTGCGCAAGATCAGGGACCAGTACCTCGTGTGGCTCACCCAGAAAGGTGCCCGACAGAGGAAGATCAACGAATGGCTGGGAATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | TGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGTACTCTCCTTGGATCTaGCTGGATGCATCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CACSPGEGIWRQTWTGRQYSPWI*LDASLT Trigger: AGTCAGAGATGCATCCAGCAAGATCCAAGGAGAGTA...CTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | GAGGGATGGCCTCCTGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATACTTTGATCAACTTGTaGTTCCCGCCTTTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGWPPARVHQGRGSGDRHTLINL*FPPFLR Trigger: CCTCAGGAAAGGCGGGAACAACAAGTTGATCAAAGT...ATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCAGGAGGCCATCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS TCA 90 bp | GCTCCAACTTCGTGCGGCTTTCGTGTATCTCCGCGATGCGAGACTTaGGTCGCTCGGAGTTCAGCAGGATCCTCTGCATCTCCTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: APTSCGFRVSPRCET*VARSSAGSSASPSH Trigger: ATGAGAAGGAGATGCAGAGGATCCTGCTGAACTCCGAGCGACTCAAGTCTCGCATCGCGGAGATACACGAAAGCCGCACGAAGTTGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS-3UTR CAA 90 bp | TGCGCGTGTTCACCAGGGGAGGGGATCTGGAGACAGACATGGACAGGGAGGCAGAAGACTTTGATCAACTaGTTGTTCCCGCCTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CACSPGEGIWRQTWTGRQKTLIN*LFPPFL Trigger: CAGGAAAGGCGGGAACAACAAGTTGATCAAAGTCTT...CTGCCTCCCTGTCCATGTCTGTCTCCAGATCCCCTCCCCTGGTGAACACGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 90 bp | CGCCGGAAGCGCTCCAAATACTCCTTGCTGCATTTCTCCTGTGTCTaGCCCTGCTCTTCGAAGATCTTGATGGTCTCGTTGAAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRKRSKYSLLHFSCV*PCSSKILMVSLKAS Trigger: AGAGGCCTTCAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAGACACAGGAGAAATGCAGCAAGGAGTATTTGGAGCGCTTCCGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 90 bp | TCCTCGTGGTGGGGGAGGGCGTCCTCATCCTCCATCAGTGAATACTaGTCCTCAGTCTCGTTCTTGATTCCCAGCCATTCGTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWWGRASSSSISEY*SSVSFLIPSHSLIF Trigger: GAAGATCAACGAATGGCTGGGAATCAAGAACGAGACTGAGGACCAGTATTCACTGATGGAGGATGAGGACGCCCTCCCCCACCACGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 90 bp | AAGCGCTCCAAATACTCCTTGCTGCATTTCTCCTGTGTCTGGCCCTaGTCTTCGAAGATCTTGATGGTCTCGTTGAAGGCCTCTATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRSKYSLLHFSCVWP*SSKILMVSLKASMA Trigger: AGCCATAGAGGCCTTCAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAGACACAGGAGAAATGCAGCAAGGAGTATTTGGAGCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 90 bp | AACTTGTTGTTCCCGCCTTTCCTGAGGGTGAGCGTGTACTCTCCTTaGATCTTGCTGGATGCATCTCTGACTAAGAAGGTACCATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLLFPPFLRVSVYSP*ILLDASLTKKVPSG Trigger: ACCTGATGGTACCTTCTTAGTCAGAGATGCATCCAGCAAGATCCAAGGAGAGTACACGCTCACCCTCAGGAAAGGCGGGAACAACAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 72 bp | ATCCAAGGGCCTGGCGGGCAACGGACGGGGCCCCCGTaGGCGAGGGCCTGGTCGAGCCAGAGCCACGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IQGPGGQRTGPP*ARAWSSQSHGS Trigger: GGACCCGTGGCTCTGGCTCGACCAGGCCCTCGCCCACGGGGGCCCCGTCCGTTGCCCGCCAGGCCCTTGGAT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS TCA 72 bp | TCCCGGGGAAGTCCCCTCGCTGTCGGGTGCGCTCGTTaGAGCCAGGCATCCAGCCCACATTGTGTGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRGSPLAVGCAR*SQASSPHCVGS Trigger: GCTGCCCACACAATGTGGGCTGGATGCCTGGCTTCAACGAGCGCACCCGACAGCGAGGGGACTTCCCCGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CAA 72 bp | GTCCCGGGGAAGTCCCCTCGCTGTCGGGTGCGCTCGTaGAAGCCAGGCATCCAGCCCACATTGTGTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPGKSPRCRVRS*KPGIQPTLCGQ Trigger: CTGCCCACACAATGTGGGCTGGATGCCTGGCTTCAACGAGCGCACCCGACAGCGAGGGGACTTCCCCGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 72 bp | GCCTGCAACCTCTCGAAGTGCCCGGTACGCCTCTGCTaGAGCTTCAGGGGTCACCACAGCTGCAGGCAACGC | + |
|
Preference number: 6 (lower is better) Translates to: ACNLSKCPVRLC*SFRGHHSCRQR Trigger: GCGTTGCCTGCAGCTGTGGTGACCCCTGAAGCTGCAGCAGAGGCGTACCGGGCACTTCGAGAGGTTGCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 72 bp | ACAGTGCTTCGTGTCGCCGTCCACCACCACGGAGCATaGGTAACAGCCCCGCTGGCTGCTCTCCCGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: TVLRVAVHHHGA*VTAPLAALPDE Trigger: CTCATCCGGGAGAGCAGCCAGCGGGGCTGTTACGCATGCTCCGTGGTGGTGGACGGCGACACGAAGCACTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CAA 72 bp | TGGCGAGGGTGCTCTGCGGGCCACACGACCCAGGTGTaGCAGCAGGAAACGCAGTGTGAGAGCCTGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WRGCSAGHTTQV*QQETQCESLVQ Trigger: CTGCACCAGGCTCTCACACTGCGTTTCCTGCTGCAACACCTGGGTCGTGTGGCCCGCAGAGCACCCTCGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CAA 72 bp | CCACTCAGCATCTCCTCCGCCTGTGTGCGGTTGATCTaGCCCACGTACCACGTGCGCTCCTCGTGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLSISSACVRLI*PTYHVRSSWWG Trigger: CCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTGAGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS CAA 90 bp | TCCACGTATGTCCCGGGGAAGTCCCCTCGCTGTCGGGTGCGCTCGTaGAAGCCAGGCATCCAGCCCACATTGTGTGGGCAGCGCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: STYVPGKSPRCRVRS*KPGIQPTLCGQRSP Trigger: AGGAGAGCGCTGCCCACACAATGTGGGCTGGATGCCTGGCTTCAACGAGCGCACCCGACAGCGAGGGGACTTCCCCGGGACATACGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CAA 90 bp | TCTCGTTTGCCACTCAGCATCTCCTCCGCCTGTGTGCGGTTGATCTaGCCCACGTACCACGTGCGCTCCTCGTGGTGGGGGAGGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLPLSISSACVRLI*PTYHVRSSWWGRAS Trigger: GGACGCCCTCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTGAGTGGCAAACGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS CAA 90 bp | GTCCCGTCTCGTTTGCCACTCAGCATCTCCTCCGCCTGTGTGCGGTaGATCTTGCCCACGTACCACGTGCGCTCCTCGTGGTGGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VPSRLPLSISSACVR*ILPTYHVRSSWWGR Trigger: CCTCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTGAGTGGCAAACGAGACGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS CAA 90 bp | CAGCCCCGCTGGCTGCTCTCCCGGATGAGGAAGGTCCCGTCTCGTTaGCCACTCAGCATCTCCTCCGCCTGTGTGCGGTTGATCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QPRWLLSRMRKVPSR*PLSISSACVRLILP Trigger: GGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTGAGTGGCAAACGAGACGGGACCTTCCTCATCCGGGAGAGCAGCCAGCGGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
||
| CDS GCA 72 bp | AGGTGTTGCAGCAGGAAACGCAGTGTGAGAGCCTGGTaGAGCGGCAGTGTTGGGGGTTCCAGCACCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RCCSRKRSVRAW*SGSVGGSSTSP Trigger: GGGGCTGGTGCTGGAACCCCCAACACTGCCGCTGCACCAGGCTCTCACACTGCGTTTCCTGCTGCAACACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 72 bp | CCCAGGTGTTGCAGCAGGAAACGCAGTGTGAGAGCCTaGTGCAGCGGCAGTGTTGGGGGTTCCAGCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRCCSRKRSVRA*CSGSVGGSSTS Trigger: GCTGGTGCTGGAACCCCCAACACTGCCGCTGCACCAGGCTCTCACACTGCGTTTCCTGCTGCAACACCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS GCA 72 bp | ATCTCACGGTTGTCGGAGGCCTGCGCCCGCAGATCCTaGTCCAACTTCGTGCGGCTTTCGTGTATCTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ISRLSEACARRS*SNFVRLSCISA Trigger: CGCGGAGATACACGAAAGCCGCACGAAGTTGGAGCAGGATCTGCGGGCGCAGGCCTCCGACAACCGTGAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 72 bp | GCGCTCGTTGAAGCCAGGCATCCAGCCCACATTGTGTaGGCAGCGCTCTCCTCCATCAGCCACACCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALVEARHPAHIV*AALSSISHTKC Trigger: GCACTTGGTGTGGCTGATGGAGGAGAGCGCTGCCCACACAATGTGGGCTGGATGCCTGGCTTCAACGAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
||
| CDS CCA 72 bp | CGGTTGATCTTGCCCACGTACCACGTGCGCTCCTCGTaGTGGGGGAGGGCGTCCTCATCCTCCATCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLILPTYHVRSS*WGRASSSSISE Trigger: TTCACTGATGGAGGATGAGGACGCCCTCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| CDS CAA 72 bp | CGTTTGCCACTCAGCATCTCCTCCGCCTGTGTGCGGTaGATCTTGCCCACGTACCACGTGCGCTCCTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RLPLSISSACVR*ILPTYHVRSSW Trigger: CCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTGAGTGGCAAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| CDS CAA 72 bp | TGGCTGCTCTCCCGGATGAGGAAGGTCCCGTCTCGTTaGCCACTCAGCATCTCCTCCGCCTGTGTGCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: WLLSRMRKVPSR*PLSISSACVRL Trigger: CAACCGCACACAGGCGGAGGAGATGCTGAGTGGCAAACGAGACGGGACCTTCCTCATCCGGGAGAGCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| CDS TCA 72 bp | GTTTGCCACTCAGCATCTCCTCCGCCTGTGTGCGGTTaGTCTTGCCCACGTACCACGTGCGCTCCTCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: VCHSASPPPVCG*SCPRTTCAPRG Trigger: ACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTGAGTGGCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034296.15 ENSMUST00000143785.2 |
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| CDS GCA 72 bp | TTCATGCGCTTGTCGATCTCACGGTTGTCGGAGGCCTaGGCCCGCAGATCCTGCTCCAACTTCGTGCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FMRLSISRLSEA*ARRSCSNFVRL Trigger: AAGCCGCACGAAGTTGGAGCAGGATCTGCGGGCGCAGGCCTCCGACAACCGTGAGATCGACAAGCGCATGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CCA 72 bp | GGTGGGGAGAACTGCTCTGCCAGGTCTGGGAGTATGTaGCCTGACTCAGAAGATCCATCCAAGGGCCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: GGENCSARSGSM*PDSEDPSKGLA Trigger: CGCCAGGCCCTTGGATGGATCTTCTGAGTCAGGCCACATACTCCCAGACCTGGCAGAGCAGTTCTCCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 72 bp | GGTTTGAGGCTGTTCATGCGCTTGTCGATCTCACGGTaGTCGGAGGCCTGCGCCCGCAGATCCTGCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GLRLFMRLSISR*SEACARRSCSN Trigger: GTTGGAGCAGGATCTGCGGGCGCAGGCCTCCGACAACCGTGAGATCGACAAGCGCATGAACAGCCTCAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 90 bp | TGCGGTCCCACTGCTCCAAGTCACTCAGGGACCAGTCTGTCCGTGTaGCGGGCAGCTCCGGCTTACTGTAGCATTCACTGTCCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CGPTAPSHSGTSLSV*RAAPAYCSIHCPAL Trigger: CAGAGCTGGACAGTGAATGCTACAGTAAGCCGGAGCTGCCCGCAACACGGACAGACTGGTCCCTGAGTGACTTGGAGCAGTGGGACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS TCA 72 bp | GGAGAACTGCTCTGCCAGGTCTGGGAGTATGTGGCCTaGCTCAGAAGATCCATCCAAGGGCCTGGCGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GELLCQVWEYVA*LRRSIQGPGGQ Trigger: TTGCCCGCCAGGCCCTTGGATGGATCTTCTGAGTCAGGCCACATACTCCCAGACCTGGCAGAGCAGTTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS GCA 72 bp | AATCGGGGGAGCAGGGTCAGGTGGGGAGAACTGCTCTaGCAGGTCTGGGAGTATGTGGCCACAAGGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: NRGSRVRWGELL*QVWEYVATRNL Trigger: CAGATTCCTTGTGGCCACATACTCCCAGACCTGGCAGAGCAGTTCTCCCCACCTGACCCTGCTCCCCCGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154685.2 |
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| CDS CCA 72 bp | TGTCGGGCACCTTTCTGGGTGAGCCACACGAGGTACTaGTCCCTGATCTTGCGCAGCTGCATGAGGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CRAPFWVSHTRY*SLILRSCMRSG Trigger: ACCTGACCTCATGCAGCTGCGCAAGATCAGGGACCAGTACCTCGTGTGGCTCACCCAGAAAGGTGCCCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CCA 72 bp | AGCAGGGTCAGGTGGGGAGAACTGCTCTGCCAGGTCTaGGAGTATGTGGCCACAAGGAATCTGCAAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SRVRWGELLCQV*EYVATRNLQAQ Trigger: CTGGGCTTGCAGATTCCTTGTGGCCACATACTCCCAGACCTGGCAGAGCAGTTCTCCCCACCTGACCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154685.2 |
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| CDS CAA 90 bp | TGCGGGCAGCTCCGGCTTACTGTAGCATTCACTGTCCAGCTCTGCTaGCTCAATGGCTTCCACCAGCTTCACCAGAATCGGGGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CGQLRLTVAFTVQLC*LNGFHQLHQNRGSR Trigger: CCTGCTCCCCCGATTCTGGTGAAGCTGGTGGAAGCCATTGAGCAAGCAGAGCTGGACAGTGAATGCTACAGTAAGCCGGAGCTGCCCGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 90 bp | ACGAGGTACTGGTCCCTGATCTTGCGCAGCTGCATGAGGTCAGGTTaGAGGCTGTTCATGCGCTTGTCGATCTCACGGTTGTCGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: TRYWSLILRSCMRSG*RLFMRLSISRLSEA Trigger: GGCCTCCGACAACCGTGAGATCGACAAGCGCATGAACAGCCTCAAACCTGACCTCATGCAGCTGCGCAAGATCAGGGACCAGTACCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS TCA 72 bp | AAGGCGTGTGTCCAGCTTGGCGTTGTACTGGGCCAGTaGTTCGTGGCGGTAGTGGGAGATGAGTTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: KACVQLGVVLGQ*FVAVVGDEFHH Trigger: GTGGTGGAACTCATCTCCCACTACCGCCACGAATCACTGGCCCAGTACAACGCCAAGCTGGACACACGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS GCA 72 bp | TCTGCCAGGTCTGGGAGTATGTGGCCACAAGGAATCTaGAAGCCCAGGGATAGTGGAGGACACGAAGGACGG | + |
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Preference number: 6 (lower is better) Translates to: SARSGSMWPQGI*KPRDSGGHEGR Trigger: CCGTCCTTCGTGTCCTCCACTATCCCTGGGCTTGCAGATTCCTTGTGGCCACATACTCCCAGACCTGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154685.2 |
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| CDS CCA 72 bp | GGTGGGGAGAACTGCTCTGCCAGGTCTGGGAGTATGTaGCCACAAGGAATCTGCAAGCCCAGGGATAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GGENCSARSGSM*PQGICKPRDSG Trigger: TCCACTATCCCTGGGCTTGCAGATTCCTTGTGGCCACATACTCCCAGACCTGGCAGAGCAGTTCTCCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154685.2 |
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| CDS TCA 72 bp | TCGTGCGGCTTTCGTGTATCTCCGCGATGCGAGACTTaGGTCGCTCGGAGTTCAGCAGGATCCTCTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SCGFRVSPRCET*VARSSAGSSAS Trigger: AGATGCAGAGGATCCTGCTGAACTCCGAGCGACTCAAGTCTCGCATCGCGGAGATACACGAAAGCCGCACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 72 bp | TTCGTGCGGCTTTCGTGTATCTCCGCGATGCGAGACTaGAGTCGCTCGGAGTTCAGCAGGATCCTCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: FVRLSCISAMRD*SRSEFSRILCI Trigger: GATGCAGAGGATCCTGCTGAACTCCGAGCGACTCAAGTCTCGCATCGCGGAGATACACGAAAGCCGCACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 90 bp | TTCTCCTGTGTCTGGCCCTGCTCTTCGAAGATCTTGATGGTCTCGTaGAAGGCCTCTATGGCTGTGCGCTTCATCTGCAGCTCCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FSCVWPCSSKILMVS*KASMAVRFICSSWE Trigger: CTCCCAGGAGCTGCAGATGAAGCGCACAGCCATAGAGGCCTTCAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAGACACAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 90 bp | TGCTCCAACTTCGTGCGGCTTTCGTGTATCTCCGCGATGCGAGACTaGAGTCGCTCGGAGTTCAGCAGGATCCTCTGCATCTCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSNFVRLSCISAMRD*SRSEFSRILCISFS Trigger: TGAGAAGGAGATGCAGAGGATCCTGCTGAACTCCGAGCGACTCAAGTCTCGCATCGCGGAGATACACGAAAGCCGCACGAAGTTGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CCA 72 bp | AGCCATTCGTTGATCTTCCTCTGTCGGGCACCTTTCTaGGTGAGCCACACGAGGTACTGGTCCCTGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SHSLIFLCRAPF*VSHTRYWSLIL Trigger: CAAGATCAGGGACCAGTACCTCGTGTGGCTCACCCAGAAAGGTGCCCGACAGAGGAAGATCAACGAATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 72 bp | GTCTGGCCCTGCTCTTCGAAGATCTTGATGGTCTCGTaGAAGGCCTCTATGGCTGTGCGCTTCATCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VWPCSSKILMVS*KASMAVRFICS Trigger: GCTGCAGATGAAGCGCACAGCCATAGAGGCCTTCAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 72 bp | CTCCGGCTTACTGTAGCATTCACTGTCCAGCTCTGCTaGCTCAATGGCTTCCACCAGCTTCACCAGAATCGG | + |
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Preference number: 6 (lower is better) Translates to: LRLTVAFTVQLC*LNGFHQLHQNR Trigger: CCGATTCTGGTGAAGCTGGTGGAAGCCATTGAGCAAGCAGAGCTGGACAGTGAATGCTACAGTAAGCCGGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 72 bp | CATTTCTCCTGTGTCTGGCCCTGCTCTTCGAAGATCTaGATGGTCTCGTTGAAGGCCTCTATGGCTGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: HFSCVWPCSSKI*MVSLKASMAVR Trigger: GCGCACAGCCATAGAGGCCTTCAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAGACACAGGAGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 72 bp | TGGTCCTCAGTCTCGTTCTTGATTCCCAGCCATTCGTaGATCTTCCTCTGTCGGGCACCTTTCTGGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: WSSVSFLIPSHS*IFLCRAPFWVS Trigger: GCTCACCCAGAAAGGTGCCCGACAGAGGAAGATCAACGAATGGCTGGGAATCAAGAACGAGACTGAGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 90 bp | TCCTTGCTGCATTTCTCCTGTGTCTGGCCCTGCTCTTCGAAGATCTaGATGGTCTCGTTGAAGGCCTCTATGGCTGTGCGCTTCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLLHFSCVWPCSSKI*MVSLKASMAVRFIC Trigger: GCAGATGAAGCGCACAGCCATAGAGGCCTTCAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAGACACAGGAGAAATGCAGCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS TCA 72 bp | GCGTGTACTCTCCTTGGATCTTGCTGGATGCATCTCTaGCTAAGAAGGTACCATCAGGTGTGTCCCGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: ACTLLGSCWMHL*LRRYHQVCPGV Trigger: GACTCCGGGACACACCTGATGGTACCTTCTTAGTCAGAGATGCATCCAGCAAGATCCAAGGAGAGTACACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS GCA 72 bp | CAGCTCCGGCTTACTGTAGCATTCACTGTCCAGCTCTaGTTGCTCAATGGCTTCCACCAGCTTCACCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QLRLTVAFTVQL*LLNGFHQLHQN Trigger: ATTCTGGTGAAGCTGGTGGAAGCCATTGAGCAAGCAGAGCTGGACAGTGAATGCTACAGTAAGCCGGAGCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 90 bp | TTGTTCCCGCCTTTCCTGAGGGTGAGCGTGTACTCTCCTTGGATCTaGCTGGATGCATCTCTGACTAAGAAGGTACCATCAGGTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LFPPFLRVSVYSPWI*LDASLTKKVPSGVS Trigger: GGACACACCTGATGGTACCTTCTTAGTCAGAGATGCATCCAGCAAGATCCAAGGAGAGTACACGCTCACCCTCAGGAAAGGCGGGAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CCA 72 bp | TTCCCGCCTTTCCTGAGGGTGAGCGTGTACTCTCCTTaGATCTTGCTGGATGCATCTCTGACTAAGAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: FPPFLRVSVYSP*ILLDASLTKKV Trigger: TACCTTCTTAGTCAGAGATGCATCCAGCAAGATCCAAGGAGAGTACACGCTCACCCTCAGGAAAGGCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CCA 72 bp | CGCTCCAAATACTCCTTGCTGCATTTCTCCTGTGTCTaGCCCTGCTCTTCGAAGATCTTGATGGTCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: RSKYSLLHFSCV*PCSSKILMVSL Trigger: CAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAGACACAGGAGAAATGCAGCAAGGAGTATTTGGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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| CDS CAA 72 bp | CCTTTCCTGAGGGTGAGCGTGTACTCTCCTTGGATCTaGCTGGATGCATCTCTGACTAAGAAGGTACCATCA | + |
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Preference number: 6 (lower is better) Translates to: PFLRVSVYSPWI*LDASLTKKVPS Trigger: TGATGGTACCTTCTTAGTCAGAGATGCATCCAGCAAGATCCAAGGAGAGTACACGCTCACCCTCAGGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034296.15 |
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