Pregenerated sensors for PIK3R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041417Ensembl transcript IDs: ENSMUST00000035532.13, ENSMUST00000055518.13, ENSMUST00000185795.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTCTGGGTTCACCACACCCAGCGACACCCAGGCTACACCAGGCTaGACCAAGCGGCCCCAGGCGCAGGCTCTTCGGCCCTGTCTACCT | + |
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Preference number: 1 (lower is better) Translates to: VSGFTTPSDTQATPG*TKRPQAQALRPCLP Trigger: AGGTAGACAGGGCCGAAGAGCCTGCGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGTGAACCCAGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | TCCAAGAAAGCTCTAGTCCCATGTGCAGACAGCCGGCTTCATTTCTaGAGCTCAGTTCACAGGTCGGGCTGGAGAGGAGCCCTTTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: SKKALVPCADSRLHF*SSVHRSGWRGALCF Trigger: GAAGCAAAGGGCTCCTCTCCAGCCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR TCA 90 bp | AGCATCCTGGGCAGCCAATGCTATCTCATGGCGACAAGCTCGGTATaGAGCAGGAGAGTCTTTCCAATGGAGCCAATTCTACCCTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SILGSQCYLMATSSV*SRRVFPMEPILPSP Trigger: GGGAGAGGGTAGAATTGGCTCCATTGGAAAGACTCTCCTGCTTCATACCGAGCTTGTCGCCATGAGATAGCATTGGCTGCCCAGGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | TGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCTCTAGTCCCATGTaGAGACAGCCGGCTTCATTTCTGCAGCTCAGTTCACAGGTCGGG | + |
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Preference number: 1 (lower is better) Translates to: CLPRLLFVQESSSPM*RQPASFLQLSSQVG Trigger: CCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | GCTGTCTCTAGAATGGGACAGTTGGTGAGAAAACCTGAGTGGGCATaGTCACATCCCAGCTATGCTGTATCTATCTGCATTCATGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: AVSRMGQLVRKPEWA*SHPSYAVSICIHEP Trigger: TGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATGTGAGCATGCCCACTCAGGTTTTCTCACCAACTGTCCCATTCTAGAGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR TCA 90 bp | CAGGAGGTGGTCGGGTCAAGTTTGTGGGCTGACAGTCTGGTTGACTaGCTTTTGCTCTTGAAAATGAGCAGTGGCTTCATAGGAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: QEVVGSSLWADSLVD*LLLLKMSSGFIGRK Trigger: TTTTCTTCCTATGAAGCCACTGCTCATTTTCAAGAGCAAAAGTCAGTCAACCAGACTGTCAGCCCACAAACTTGACCCGACCACCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | TTACAAATAAGTATTAACTCTTCAGTTGTATGTGGTGTGGCGGAATaGTACCGCTGGAGGTTGCAAAGCCCAGAGTCAACCCGGGGAATC | + |
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Preference number: 1 (lower is better) Translates to: LQISINSSVVCGVAE*YRWRLQSPESTRGI Trigger: GATTCCCCGGGTTGACTCTGGGCTTTGCAACCTCCAGCGGTAGCATTCCGCCACACCACATACAACTGAAGAGTTAATACTTATTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR TCA 90 bp | TTGTCAAATGTTGCAAAATATGCTTGCTGCCTTATCCCATGGCTATaGTCACTCTGGTGTGGAACACAAGGTCCCAACCCTCCCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: LSNVAKYACCLIPWL*SLWCGTQGPNPPTS Trigger: AGAAGTGGGAGGGTTGGGACCTTGTGTTCCACACCAGAGTGATCATAGCCATGGGATAAGGCAGCAAGCATATTTTGCAACATTTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR TCA 90 bp | CAAAGCGATTGGTTCCCCACAATGACAGCTCACAGAAACACACTCTaGCTTGACAACACTGAGAACAGGGATCCATCAGGTAAGCAAATC | + |
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Preference number: 1 (lower is better) Translates to: QSDWFPTMTAHRNTL*LDNTENRDPSGKQI Trigger: GATTTGCTTACCTGATGGATCCCTGTTCTCAGTGTTGTCAAGTCAGAGTGTGTTTCTGTGAGCTGTCATTGTGGGGAACCAATCGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CCA 90 bp | ACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTaGGATGGAGTTACAACATTAGGTCTGGAGTTGCTGTTAATTGCT | + |
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Preference number: 1 (lower is better) Translates to: TNSALHDNGDAGQLC*DGVTTLGLELLLIA Trigger: AGCAATTAACAGCAACTCCAGACCTAATGTTGTAACTCCATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR TCA 90 bp | GAGAACAGGGATCCATCAGGTAAGCAAATCATCCAGGCTGCTCCCTaGAAGGGAAGAGCTTCTAAAAAGAGGAAAGTATCAAATGACGGA | + |
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Preference number: 1 (lower is better) Translates to: ENRDPSGKQIIQAAP*KGRASKKRKVSNDG Trigger: TCCGTCATTTGATACTTTCCTCTTTTTAGAAGCTCTTCCCTTTCAGGGAGCAGCCTGGATGATTTGCTTACCTGATGGATCCCTGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | AGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTaGTGGGATGGAGTTACAACATTAGGTCTGGAGTTGCTGTTAATT | + |
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Preference number: 1 (lower is better) Translates to: RTNSALHDNGDAGQL*WDGVTTLGLELLLI Trigger: AATTAACAGCAACTCCAGACCTAATGTTGTAACTCCATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | TTCGAACAGACAACAAAACCCACTTTCCAACTGACTTGGATACCATaGATTGCGAAAGCACAGTTGAGAAAACCTGCAAGAACTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: FEQTTKPTFQLTWIP*IAKAQLRKPARTFS Trigger: GGAGAAAGTTCTTGCAGGTTTTCTCAACTGTGCTTTCGCAATGCATGGTATCCAAGTCAGTTGGAAAGTGGGTTTTGTTGTCTGTTCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CCA 90 bp | ACACACATACACACACACACACACACACATATACAAGACCTGTACTaGACATCTGCTTGTTATGTACTTGAACTTGACTGTGGATCTGCG | + |
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Preference number: 1 (lower is better) Translates to: THIHTHTHTHIQDLY*TSACYVLELDCGSA Trigger: CGCAGATCCACAGTCAAGTTCAAGTACATAACAAGCAGATGTCCAGTACAGGTCTTGTATATGTGTGTGTGTGTGTGTGTGTATGTGTGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CCA 90 bp | GACCCTAAATTCGAACAGACAACAAAACCCACTTTCCAACTGACTTaGATACCATGCATTGCGAAAGCACAGTTGAGAAAACCTGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: DPKFEQTTKPTFQLT*IPCIAKAQLRKPAR Trigger: TCTTGCAGGTTTTCTCAACTGTGCTTTCGCAATGCATGGTATCCAAGTCAGTTGGAAAGTGGGTTTTGTTGTCTGTTCGAATTTAGGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | ACTGACTTGGATACCATGCATTGCGAAAGCACAGTTGAGAAAACCTaGAAGAACTTTCTCCCAATAAAGAACATCAGTAGGACTTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: TDLDTMHCESTVEKT*KNFLPIKNISRTSQ Trigger: TTGGGAAGTCCTACTGATGTTCTTTATTGGGAGAAAGTTCTTGCAGGTTTTCTCAACTGTGCTTTCGCAATGCATGGTATCCAAGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | ACAGACAACAAAACCCACTTTCCAACTGACTTGGATACCATGCATTaGGAAAGCACAGTTGAGAAAACCTGCAAGAACTTTCTCCCAATA | + |
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Preference number: 1 (lower is better) Translates to: TDNKTHFPTDLDTMH*ESTVEKTCKNFLPI Trigger: TATTGGGAGAAAGTTCTTGCAGGTTTTCTCAACTGTGCTTTCGCAATGCATGGTATCCAAGTCAGTTGGAAAGTGGGTTTTGTTGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | GAGAAGAATTTGGCATTTTGGAATGTTGTCCCATGGGAGGCATTGTaGTTCTTAACTGCCCCTTTCTTAAATGACCCTAAATTCGAACAG | + |
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Preference number: 1 (lower is better) Translates to: EKNLAFWNVVPWEAL*FLTAPFLNDPKFEQ Trigger: CTGTTCGAATTTAGGGTCATTTAAGAAAGGGGCAGTTAAGAAGCACAATGCCTCCCATGGGACAACATTCCAAAATGCCAAATTCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR TCA 90 bp | ATAGTTCATAATCAGATATACGACAAAGCGATTGGTTCCCCACAATaGCAGCTCACAGAAACACACTCTGACTTGACAACACTGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: IVHNQIYDKAIGSPQ*QLTETHSDLTTLRT Trigger: TGTTCTCAGTGTTGTCAAGTCAGAGTGTGTTTCTGTGAGCTGTCATTGTGGGGAACCAATCGCTTTGTCGTATATCTGATTATGAACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | TCCCTCCAGATTCAAGAAGTTCACAATTCATTAGGAAACAAACATTaGCAGGTACCGTATTTCAAGAGTCTTAACACTGTTGGACTCAGC | + |
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Preference number: 1 (lower is better) Translates to: SLQIQEVHNSLGNKH*QVPYFKSLNTVGLS Trigger: GCTGAGTCCAACAGTGTTAAGACTCTTGAAATACGGTACCTGGCAATGTTTGTTTCCTAATGAATTGTGAACTTCTTGAATCTGGAGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CCA 90 bp | TGGACATCTGCTTGTTATGTACTTGAACTTGACTGTGGATCTGCGTaGCTGAAAGGTGTATTGGAAACAGTCCATGCACATTATACATAT | + |
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Preference number: 1 (lower is better) Translates to: WTSACYVLELDCGSA*LKGVLETVHAHYTY Trigger: ATATGTATAATGTGCATGGACTGTTTCCAATACACCTTTCAGCCACGCAGATCCACAGTCAAGTTCAAGTACATAACAAGCAGATGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR TCA 90 bp | CATCTGCTTGTTATGTACTTGAACTTGACTGTGGATCTGCGTGGCTaGAAGGTGTATTGGAAACAGTCCATGCACATTATACATATATAC | + |
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Preference number: 1 (lower is better) Translates to: HLLVMYLNLTVDLRG*KVYWKQSMHIIHIY Trigger: GTATATATGTATAATGTGCATGGACTGTTTCCAATACACCTTTCAGCCACGCAGATCCACAGTCAAGTTCAAGTACATAACAAGCAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 90 bp | TTATACATATATACATATATCCAGGGCTGTGAAGTTGTCAAATGTTaGAAAATATGCTTGCTGCCTTATCCCATGGCTATGATCACTCTG | + |
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Preference number: 1 (lower is better) Translates to: LYIYTYIQGCEVVKC*KICLLPYPMAMITL Trigger: CAGAGTGATCATAGCCATGGGATAAGGCAGCAAGCATATTTTGCAACATTTGACAACTTCACAGCCCTGGATATATGTATATATGTATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | CCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCTCTAGTCCCATGGAGAGGAGCCCTTTaGTTCTCAGAGGCCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PRLRVFPDFFLSKKALVPWRGAL*FSEALG Trigger: ACCCAAGGCCTCTGAGAAGCAAAGGGCTCCTCTCCA...TGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR CAA 90 bp | TGGTCATCCAACAGTCCGAGGCTGCGTGTCTTCCCCGACTTCTTTTaGTCCAAGAAAGCTCTAGTCCCATGTGCAGACAGCCGGCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: WSSNSPRLRVFPDFF*SKKALVPCADSRLH Trigger: ATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGGACTGTTGGATGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | GCGACAGGGACTACCATCAACCTCTACCCATCACAGCACATGGCAATTCCCCATGGGATCCCTAGAAAGTaGACACCACCTTACTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: ATGTTINLYPSQHMAIPHGIPRK*TPPYFP Trigger: GGGGAAGTAAGGTGGTGTGCACTTTCTAGGGATCCC...ATGGGGAATTGCCATGTGCTGTGATGGGTAGAGGTTGATGGTAGTCCCTGTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | CCAAAAGGGCATTCAGTAGGACAGGTGTGCTATAACTCAATGACTCCTGCCTTCTGGAGAGGAGCCCTTTaGTTCTCAGAGGCCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PKGHSVGQVCYNSMTPAFWRGAL*FSEALG Trigger: ACCCAAGGCCTCTGAGAAGCAAAGGGCTCCTCTCCA...GAAGGCAGGAGTCATTGAGTTATAGCACACCTGTCCTACTGAATGCCCTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTGGTGGGTTGTTGGTTGCTGACTTGATAAGTTTAAACAAAAACGTTTTCCAGGCTACACCAGGCTaGACCAAGCGGCCCCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: SVGGLLVADLISLNKNVFQATPG*TKRPQA Trigger: CGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTG...GAAAACGTTTTTGTTTAAACTTATCAAGTCAGCAACCAACAACCCACCAACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | CATCCCAGCTATGCTGTATCTATCTGCATTCATGAGCCACTCGGTGTTACTAGAAGCCGGCTTCATTTCTaGAGCTCAGTTCACAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: HPSYAVSICIHEPLGVTRSRLHF*SSVHRS Trigger: CGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCT...TCTAGTAACACCGAGTGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR CCA 90 bp | CCAAAAGGGCATTCAGTAGGACAGGTGTGCTATAACTCAATGACTCCTGCCTTCGCCCTGTCTACCTTCTaGTCTCCAAAGTCCCAACTT | + |
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Preference number: 2 (lower is better) Translates to: PKGHSVGQVCYNSMTPAFALSTF*SPKSQL Trigger: AAGTTGGGACTTTGGAGACCAGAAGGTAGACAGGGC...GAAGGCAGGAGTCATTGAGTTATAGCACACCTGTCCTACTGAATGCCCTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | ACGTTTTCTGGTGTTTCATTTTTCCTCCGAACAGACTGCATCAATGTTCTCTCAAGCCGGCTTCATTTCTaGAGCTCAGTTCACAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: TFSGVSFFLRTDCINVLSSRLHF*SSVHRS Trigger: CGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCT...TGAGAGAACATTGATGCAGTCTGTTCGGAGGAAAAATGAAACACCAGAAAACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR-3UTR CCA 90 bp | AGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTGGGATTCAAGCAACAAAAACTaGGGTAAGGGAAGCTTATTC | + |
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Preference number: 2 (lower is better) Translates to: RTNSALHDNGDAGQLCWDSSNKN*GKGSLF Trigger: GAATAAGCTTCCCTTACCCCAGTTTTTGTTGCTTGA...ATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | CATCCCAGCTATGCTGTATCTATCTGCATTCATGAGCCACTCGGTGTTACTAGATCAGTAGGACAGGTGTaGTATAACTCAATGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: HPSYAVSICIHEPLGVTRSVGQV*YNSMTP Trigger: AGGAGTCATTGAGTTATAGCACACCTGTCCTACTGA...TCTAGTAACACCGAGTGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR CCA 90 bp | AGCCACTCGGTGTTACTAGAAGATGGCTTGGATGGAATCCACAGAACCTTAATGAAAATGAATGGTGACTaGCTGACTGCTGTGACTAGT | + |
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Preference number: 2 (lower is better) Translates to: SHSVLLEDGLDGIHRTLMKMNGD*LTAVTS Trigger: ACTAGTCACAGCAGTCAGCCAGTCACCATTCATTTT...CATTAAGGTTCTGTGGATTCCATCCAAGCCATCTTCTAGTAACACCGAGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CAA 90 bp | ACATATATCCAGGGCTGTGAAGTTGTCAAATGTTGCAAAATATGCTaGCTGCCTTATCCCATGGCTATGATCACTCTGGTGTGGAACACA | + |
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Preference number: 2 (lower is better) Translates to: TYIQGCEVVKCCKIC*LPYPMAMITLVWNT Trigger: TGTGTTCCACACCAGAGTGATCATAGCCATGGGATAAGGCAGCAAGCATATTTTGCAACATTTGACAACTTCACAGCCCTGGATATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | CCAAAAGGGCATTCAGTAGGACAGGTGTGCTATAACTCAATGACTCCTGCCTTCTTAGGAAACAAACATTaGCAGGTACCGTATTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: PKGHSVGQVCYNSMTPAFLGNKH*QVPYFK Trigger: CTTGAAATACGGTACCTGGCAATGTTTGTTTCCTAA...GAAGGCAGGAGTCATTGAGTTATAGCACACCTGTCCTACTGAATGCCCTTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CAA 90 bp | AAAGAGAAGAATTTGGCATTTTGGAATGTTGTCCCATGGGAGGCATaGTGCTTCTTAACTGCCCCTTTCTTAAATGACCCTAAATTCGAA | + |
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Preference number: 2 (lower is better) Translates to: KEKNLAFWNVVPWEA*CFLTAPFLNDPKFE Trigger: TTCGAATTTAGGGTCATTTAAGAAAGGGGCAGTTAAGAAGCACAATGCCTCCCATGGGACAACATTCCAAAATGCCAAATTCTTCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR-3UTR GCA 90 bp | TGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGGTATTGATACAAGGCCTCTTTGTCCCTaGACGGAGAGATTTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: CTFIAFSKTKQKLFGIDTRPLCP*TERFLH Trigger: ATGCAAAAATCTCTCCGTGCAGGGACAAAGAGGCCT...TGTATCAATACCAAATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR CCA 72 bp | TTCACCACACCCAGCGACACCCAGGCTACACCAGGCTaGACCAAGCGGCCCCAGGCGCAGGCTCTTCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: FTTPSDTQATPG*TKRPQAQALRP Trigger: GGGCCGAAGAGCCTGCGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGTGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR GCA 72 bp | GCTCTAGTCCCATGTGCAGACAGCCGGCTTCATTTCTaGAGCTCAGTTCACAGGTCGGGCTGGAGAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: ALVPCADSRLHF*SSVHRSGWRGA Trigger: GGCTCCTCTCCAGCCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR CCA 72 bp | GCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTaGGATGGAGTTACAACATTAGGTCTGGAGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: ALHDNGDAGQLC*DGVTTLGLELL Trigger: CAGCAACTCCAGACCTAATGTTGTAACTCCATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR TCA 72 bp | GGCAGCCAATGCTATCTCATGGCGACAAGCTCGGTATaGAGCAGGAGAGTCTTTCCAATGGAGCCAATTCTA | + |
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Preference number: 3 (lower is better) Translates to: GSQCYLMATSSV*SRRVFPMEPIL Trigger: TAGAATTGGCTCCATTGGAAAGACTCTCCTGCTTCATACCGAGCTTGTCGCCATGAGATAGCATTGGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 72 bp | AGGTTAGAAACGTCTGGTCATCCAACAGTCCGAGGCTaGGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: RLETSGHPTVRG*VSSPTSFCPRK Trigger: CTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGGACTGTTGGATGACCAGACGTTTCTAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| 3UTR GCA 72 bp | TCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTaGTGGGATGGAGTTACAACATTAGGTCTGGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: SALHDNGDAGQL*WDGVTTLGLEL Trigger: CAACTCCAGACCTAATGTTGTAACTCCATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR GCA 72 bp | AGTATTAACTCTTCAGTTGTATGTGGTGTGGCGGAATaGTACCGCTGGAGGTTGCAAAGCCCAGAGTCAACC | + |
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Preference number: 3 (lower is better) Translates to: SINSSVVCGVAE*YRWRLQSPEST Trigger: GGTTGACTCTGGGCTTTGCAACCTCCAGCGGTAGCATTCCGCCACACCACATACAACTGAAGAGTTAATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CCA 72 bp | CAGGGACTACCATCAACCTCTACCCATCACAGCACATaGCAATTCCCCATGAACTCACCAGCTTTGACACAT | + |
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Preference number: 3 (lower is better) Translates to: QGLPSTSTHHST*QFPMNSPALTH Trigger: ATGTGTCAAAGCTGGTGAGTTCATGGGGAATTGCCATGTGCTGTGATGGGTAGAGGTTGATGGTAGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| 3UTR CCA 72 bp | GAGAAAGAGAAACTGATGATGGCTCATGAATCTACCTaGGCTGCGACAGGGACTACCATCAACCTCTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: EKEKLMMAHEST*AATGTTINLYP Trigger: TGGGTAGAGGTTGATGGTAGTCCCTGTCGCAGCCCAGGTAGATTCATGAGCCATCATCAGTTTCTCTTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR CCA 72 bp | TTGCTGCCTTATCCCATGGCTATGATCACTCTGGTGTaGAACACAAGGTCCCAACCCTCCCACTTCTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLPYPMAMITLV*NTRSQPSHFYS Trigger: ACTATAGAAGTGGGAGGGTTGGGACCTTGTGTTCCACACCAGAGTGATCATAGCCATGGGATAAGGCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR TCA 72 bp | TGGTTCCCCACAATGACAGCTCACAGAAACACACTCTaGCTTGACAACACTGAGAACAGGGATCCATCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WFPTMTAHRNTL*LDNTENRDPSG Trigger: ACCTGATGGATCCCTGTTCTCAGTGTTGTCAAGTCAGAGTGTGTTTCTGTGAGCTGTCATTGTGGGGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR GCA 72 bp | CGACTTCTTTTTGTCCAAGAAAGCTCTAGTCCCATGTaGAGACAGCCGGCTTCATTTCTGCAGCTCAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RLLFVQESSSPM*RQPASFLQLSS Trigger: TGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| 3UTR GCA 72 bp | TGGGCATGCTCACATCCCAGCTATGCTGTATCTATCTaGATTCATGAGCCACTCGGTGTTACTAGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: WACSHPSYAVSI*IHEPLGVTRRW Trigger: CCATCTTCTAGTAACACCGAGTGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATGTGAGCATGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR CCA 72 bp | GTCTCTAGAATGGGACAGTTGGTGAGAAAACCTGAGTaGGCATGCTCACATCCCAGCTATGCTGTATCTATC | + |
|
Preference number: 3 (lower is better) Translates to: VSRMGQLVRKPE*ACSHPSYAVSI Trigger: GATAGATACAGCATAGCTGGGATGTGAGCATGCCCACTCAGGTTTTCTCACCAACTGTCCCATTCTAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | CATCCCAGCTATGCTGTATCTATCTGCATTCATGAGCCACTCGGTGTTACTAGATCTCCAAGGACAGAGTaGGTGAGCATGCTAACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HPSYAVSICIHEPLGVTRSPRTE*VSMLTC Trigger: ACAGGTTAGCATGCTCACCAACTCTGTCCTTGGAGA...TCTAGTAACACCGAGTGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACTGGTTAAAGGCCTCTTaGTCCCTGCACGGAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: FWSPKSQLVAGKASESVNWLKAS*SLHGEI Trigger: AATCTCTCCGTGCAGGGACAAAGAGGCCTTTAACCA...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| 3UTR TCA 72 bp | GTCGGGTCAAGTTTGTGGGCTGACAGTCTGGTTGACTaGCTTTTGCTCTTGAAAATGAGCAGTGGCTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: VGSSLWADSLVD*LLLLKMSSGFI Trigger: TATGAAGCCACTGCTCATTTTCAAGAGCAAAAGTCAGTCAACCAGACTGTCAGCCCACAAACTTGACCCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR GCA 72 bp | AGAATGGGACAGTTGGTGAGAAAACCTGAGTGGGCATaGTCACATCCCAGCTATGCTGTATCTATCTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: RMGQLVRKPEWA*SHPSYAVSICI Trigger: AATGCAGATAGATACAGCATAGCTGGGATGTGAGCATGCCCACTCAGGTTTTCTCACCAACTGTCCCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATTCCCCGACTTCTTTTaGTCCAAGAAAGCTCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LSTFWSPKSQLVAGKASEFPDFF*SKKALV Trigger: GACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | AGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTGGGATAGAGTCTTAACACTGTaGGACTCAGCAATACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RTNSALHDNGDAGQLCWDRVLTL*DSAILC Trigger: ACAAAGTATTGCTGAGTCCAACAGTGTTAAGACTCT...ATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCTGCAGGTGTGTCTGATATTGAGAAAGAGAAACTGATGATGGCTCATGAATGGTTAAAGGCCTCTTaGTCCCTGCACGGAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: KAAGVSDIEKEKLMMAHEWLKAS*SLHGEI Trigger: AATCTCTCCGTGCAGGGACAAAGAGGCCTTTAACCA...TTCATGAGCCATCATCAGTTTCTCTTTCTCAATATCAGACACACCTGCAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACTCGGTGTTACTAGAAGATGGCTTGGATGGAATCCACAGAACCTTAATGGTATTAACTCTTCAGTaGTATGTGGTGTGGCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSVLLEDGLDGIHRTLMVLTLQ*YVVWRN Trigger: ATTCCGCCACACCACATACAACTGAAGAGTTAATAC...CATTAAGGTTCTGTGGATTCCATCCAAGCCATCTTCTAGTAACACCGAGTGGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR TCA 72 bp | CCACCCACTTGGGTCTACTTGCCTTCCATTCTAAACTaGACTCTGAACAGAGAGCTGGAAAAATATCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPTWVYLPSILN*TLNRELEKYQA Trigger: TGCTTGATATTTTTCCAGCTCTCTGTTCAGAGTTCAGTTTAGAATGGAAGGCAAGTAGACCCAAGTGGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR GCA 72 bp | ATCCAGGGCTGTGAAGTTGTCAAATGTTGCAAAATATaGTTGCTGCCTTATCCCATGGCTATGATCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IQGCEVVKCCKI*LLPYPMAMITL Trigger: CAGAGTGATCATAGCCATGGGATAAGGCAGCAAGCATATTTTGCAACATTTGACAACTTCACAGCCCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR CCA 72 bp | GCTTGTTATGTACTTGAACTTGACTGTGGATCTGCGTaGCTGAAAGGTGTATTGGAAACAGTCCATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: ACYVLELDCGSA*LKGVLETVHAH Trigger: ATGTGCATGGACTGTTTCCAATACACCTTTCAGCCACGCAGATCCACAGTCAAGTTCAAGTACATAACAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAAGGGCATTCAGTAGGACAGGTGTGCTATAACTCAATGACTCCTGCCTTCATTAGGAAACAAACATaGCCAGGTACCGTATTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PKGHSVGQVCYNSMTPAFIRKQT*PGTVFQ Trigger: TTGAAATACGGTACCTGGCAATGTTTGTTTCCTAAT...GAAGGCAGGAGTCATTGAGTTATAGCACACCTGTCCTACTGAATGCCCTTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR-3UTR CAA 90 bp | CTCACAGAAACACACTCTGACTTGACAACACTGAGAACAGGGATCCATCAGGTATCCAGGGCTGTGAAGTaGTCAAATGTTGCAAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: LTETHSDLTTLRTGIHQVSRAVK*SNVAKY Trigger: ATATTTTGCAACATTTGACAACTTCACAGCCCTGGA...TACCTGATGGATCCCTGTTCTCAGTGTTGTCAAGTCAGAGTGTGTTTCTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR TCA 72 bp | AATCAGATATACGACAAAGCGATTGGTTCCCCACAATaGCAGCTCACAGAAACACACTCTGACTTGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: NQIYDKAIGSPQ*QLTETHSDLTT Trigger: TGTTGTCAAGTCAGAGTGTGTTTCTGTGAGCTGTCATTGTGGGGAACCAATCGCTTTGTCGTATATCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR GCA 72 bp | TTGGCATTTTGGAATGTTGTCCCATGGGAGGCATTGTaGTTCTTAACTGCCCCTTTCTTAAATGACCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAFWNVVPWEAL*FLTAPFLNDPK Trigger: TTTAGGGTCATTTAAGAAAGGGGCAGTTAAGAAGCACAATGCCTCCCATGGGACAACATTCCAAAATGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR TCA 72 bp | GTTATGTACTTGAACTTGACTGTGGATCTGCGTGGCTaGAAGGTGTATTGGAAACAGTCCATGCACATTATA | + |
|
Preference number: 3 (lower is better) Translates to: VMYLNLTVDLRG*KVYWKQSMHII Trigger: TATAATGTGCATGGACTGTTTCCAATACACCTTTCAGCCACGCAGATCCACAGTCAAGTTCAAGTACATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR GCA 72 bp | TATACATATATCCAGGGCTGTGAAGTTGTCAAATGTTaGAAAATATGCTTGCTGCCTTATCCCATGGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: YTYIQGCEVVKC*KICLLPYPMAM Trigger: CATAGCCATGGGATAAGGCAGCAAGCATATTTTGCAACATTTGACAACTTCACAGCCCTGGATATATGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | ACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCAGGCGCTCTCGGTACTCAGCTaGCTGCTTCTTCAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSDTQATPGWTKRPQALSVLS*LLLQVF Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTACCGAGAG...CGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | ACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCAGGCGTTGTTAATGACGCAATaGTTGACTTCGCCGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSDTQATPGWTKRPQALLMTQ*LTSPST Trigger: GGTAGACGGCGAAGTCAAGCATTGCGTCATTAACAA...CGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | ACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCAGGCGACTCAACCACAGAGTTaGAGGTTAATGGATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTPSDTQATPGWTKRPQATQPQS*RLMDQR Trigger: TCTCTGATCCATTAACCTTCAACTCTGTGGTTGAGT...CGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | GTTCACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCATTGTTAATGACGCAATaGTTGACTTCGCCGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: VHHTQRHPGYTRLDQAAPLLMTQ*LTSPST Trigger: GGTAGACGGCGAAGTCAAGCATTGCGTCATTAACAA...TGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | GTTCACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCAACTTCACATCCAGCTTaGGGTTGTACTGAGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHHTQRHPGYTRLDQAAPTSHPA*GCTELK Trigger: CTTTAGCTCAGTACAACCCCAAGCTGGATGTGAAGT...TGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | AGGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATCCGCTTTGTTTCGGTTaGTGCTCCCGACATTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLLRGLGWLEGEELDPLCFG*CSRHST Trigger: CGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGG...ATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTCCCGGACAAGGAAAGTaGCGTCTCGCTTCCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPEQTQHFMTTEMLANCAPGQGK*RLASLA Trigger: TGCGAGGGAAGCGAGACGGCACTTTCCTTGTCCGGG...AGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | GTTCACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCAAGTTTATATCTGTCTTaGCACACTCTAAGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHHTQRHPGYTRLDQAAPSLYLS*HTLSPG Trigger: ACCTGGACTTAGAGTGTGCCAAGACAGATATAAACT...TGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035532.13 |
||
| CDS-3UTR GCA 90 bp | GGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATCCTTTGTTTCGGTTGCTaGTCCCGACATTCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GALCFSEALGGLKVRNWILCFGC*SRHSTS Trigger: AGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAG...GATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | GCAGACAGCCGGCTTCATTTCTGCAGCTCAGTTCACAGGTCGGGCTGGAGAGGATCTTCAACAGCTGGATaGAGTCTTCAGGGCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ADSRLHFCSSVHRSGWRGSSTAG*SLQGSV Trigger: TACAGAGCCCTGAAGACTGCATCCAGCTGTTGAAGA...TCCTCTCCAGCCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATCCACGTCTTCTCGTCATaGTGGGGCAAATCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GALCFSEALGGLKVRNWIHVFSS*WGKSSS Trigger: TGATGAGGATTTGCCCCACCATGACGAGAAGACGTG...GATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGCCGGCTTCATTTCTGCAGCTCAGTTCACAGGTCGGGCTGGAGAGGACTCCCCTCTCCCCAGTaGTTTCATTGTAGCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: ADSRLHFCSSVHRSGWRGLPSPQ*FHCSHL Trigger: TAAATGGCTACAATGAAACCACTGGGGAGAGGGGAG...TCCTCTCCAGCCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | GTTGTATGTGGTGTGGCGGAATGCTACCGCTGGAGGTaGCAAAGCCCAGAGTCAACCCGGGGAATCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVCGVAECYRWR*QSPESTRGINF Trigger: GAAATTGATTCCCCGGGTTGACTCTGGGCTTTGCAACCTCCAGCGGTAGCATTCCGCCACACCACATACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | GTCATCCAACAGTCCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCAGCCCTGCTTACTaGTCTCCCGGACAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VIQQSEAACLPRLLFVQESSPAY*SPGQGK Trigger: CTTTCCTTGTCCGGGAGAGCAGTAAGCAGGGCTGCT...TTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGGACTGTTGGATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | AACAGTCCGAGGCTGCGTGTCTTCCCCGACTTCTTTTaGTCCAAGAAAGCTCTAGTCCCATGTGCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSPRLRVFPDFF*SKKALVPCADS Trigger: GCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGGACTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TTGTCCAAGAAAGCTCTAGTCCCATGTGCAGACAGCCGGCTTCATTTCTGCAGCTTGAGGGAGTCATTGTaGTGCACGAGGGAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKKALVPCADSRLHFCSLRESL*CTREVC Trigger: ACACACCTCCCTCGTGCAGCACAATGACTCCCTCAA...GCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAAGAAAGCTCTAGTCCCATGTGCAGACAGCCGGCTTCATTTCTGCAGCATCAGAGCTGGCGGCTaGAAATCTGAAAAGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSKKALVPCADSRLHFCSIRAGG*KSEKHG Trigger: CCCGTGCTTTTCAGATTTCCAGCCGCCAGCTCTGAT...GCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | AGGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATCTTGGGAGTAGGGGGTaGAATTCTTTTCCTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLLRGLGWLEGEELDLGSRG*NSFPSN Trigger: ATTGGAAGGAAAAGAATTTCACCCCCTACTCCCAAG...ATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | GTCATCCAACAGTCCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAACGGCGAGATAGCGTTTaGAAGCATCTGCTAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VIQQSEAACLPRLLFVQERRDSV*KHLLRR Trigger: ACGTCTTAGCAGATGCTTTCAAACGCTATCTCGCCG...TTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGGACTGTTGGATGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTCTTTGTTTCGGTTGCTaGTCCCGACATTCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPEQTQHFMTTEMLANCALCFGC*SRHSTS Trigger: AGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAG...AGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACCCCGGACAAGGAAAGTaGCGTCTCGCTTCCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKSQLVAGKASESVNPGQGK*RLASLA Trigger: TGCGAGGGAAGCGAGACGGCACTTTCCTTGTCCGGG...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | CCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCTCTAGTCCCAGATCCTGCTGGTATTTaGACACTGGGTAGAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PRLRVFPDFFLSKKALVPDPAGI*TLGRAT Trigger: AGTTGCTCTACCCAGTGTCCAAATACCAGCAGGATC...TGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | AGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTGGGATGTCAGCTTCAGTTTTTaGAGAACCCGGAGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTNSALHDNGDAGQLCWDVSFSF*RTRSNR Trigger: CCTGTTGCTCCGGGTTCTTCAAAAACTGAAGCTGAC...ATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | AGGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATTCTCTATGTATTCTTTaGTGTACCGCTCCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLLRGLGWLEGEELDSLCIL*CTAPGF Trigger: AAACCCAGGAGCGGTACAGCAAAGAATACATAGAGA...ATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | CCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCTCTAGTCCCATTCATTTGGATTTCCTaGGAAGTACGGGTGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRLRVFPDFFLSKKALVPFIWIS*EVRVYS Trigger: GGAGTACACCCGTACTTCCCAGGAAATCCAAATGAA...TGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGTCCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCTGTCTTCTCGTCATGGTaGGGCAAATCCTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SNSPRLRVFPDFFLSKKAVFSSW*GKSSSS Trigger: AGATGATGAGGATTTGCCCCACCATGACGAGAAGAC...AGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGGACTGTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | CCAAAAGGGCATTCAGTAGGACAGGTGTGCTATAACTCAATGACTCCTGCCTTCTGCCGCACACCTTTCTaGGTCAGCCACATCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PKGHSVGQVCYNSMTPAFCRTPF*VSHIKY Trigger: ATACTTGATGTGGCTGACGCAGAAAGGTGTGCGGCA...GAAGGCAGGAGTCATTGAGTTATAGCACACCTGTCCTACTGAATGCCCTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAAGAAAGCTCTAGTCCCATGTGCAGACAGCCGGCTTCATTTCTGCAGCCTGGTATTTGGACACTaGGTAGAGCAACTTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LSKKALVPCADSRLHFCSLVFGH*VEQLHI Trigger: GATGTGAAGTTGCTCTACCCAGTGTCCAAATACCAG...GCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTGCCGTTCTTTTCATTTaGATTTCCTGGGAAGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: TPEQTQHFMTTEMLANCAAVLFI*ISWEVR Trigger: CCGTACTTCCCAGGAAATCCAAATGAAAAGAACGGC...AGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTTCATTTTTCCTCCGAACAGACTGCATCAATGTTCTCTCAAAGTGTCCAGCAGCCCTGCTTACTaGTCTCCCGGACAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WCFIFPPNRLHQCSLKVSSSPAY*SPGQGK Trigger: CTTTCCTTGTCCGGGAGAGCAGTAAGCAGGGCTGCT...GGACACTTTGAGAGAACATTGATGCAGTCTGTTCGGAGGAAAAATGAAACACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATTCAACGTAAGTTCCTaGAAAGTCTCCCCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTFWSPKSQLVAGKASEFNVSS*KVSPLP Trigger: GGGGAGAGGGGAGACTTTCCAGGAACTTACGTTGAA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACCTCTCGGTACTCAGCTaGCTGCTTCTTCAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKSQLVAGKASESVNLSVLS*LLLQVF Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTACCGAGAG...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTTCATTTTTCCTCCGAACAGACTGCATCAATGTTCTCTCAAAGTGTCCTTGAGGGAGTCATTGTaGTGCACGAGGGAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WCFIFPPNRLHQCSLKVSLRESL*CTREVC Trigger: ACACACCTCCCTCGTGCAGCACAATGACTCCCTCAA...GGACACTTTGAGAGAACATTGATGCAGTCTGTTCGGAGGAAAAATGAAACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATTGCTGTACCGCTCCTaGGTTTGGCATTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTFWSPKSQLVAGKASELLYRS*VWHCSS Trigger: TGAAGAACAATGCCAAACCCAGGAGCGGTACAGCAA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGCTATGCTGTATCTATCTGCATTCATGAGCCACTCGGTGTTACTAGATTGCTGTACCGCTCCTaGGTTTGGCATTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPSYAVSICIHEPLGVTRLLYRS*VWHCSS Trigger: TGAAGAACAATGCCAAACCCAGGAGCGGTACAGCAA...TCTAGTAACACCGAGTGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACCACGTCTTCTCGTCATaGTGGGGCAAATCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKSQLVAGKASESVNHVFSS*WGKSSS Trigger: TGATGAGGATTTGCCCCACCATGACGAGAAGACGTG...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | CAGAACCTTAATGGTCAAACCTCTCCAAGGACAGAGTaGGTGAGCATGCTAACCTGTCACCAAAAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QNLNGQTSPRTE*VSMLTCHQKGI Trigger: AATGCCCTTTTGGTGACAGGTTAGCATGCTCACCAACTCTGTCCTTGGAGAGGTTTGACCATTAAGGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | CTCACAGAAACACACTCTGACTTGACAACACTGAGAACAGGGATCCATCAGGTAAAACAGCTACAGGAATaGCAGGATTTGGTAAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTETHSDLTTLRTGIHQVKQLQE*QDLVSR Trigger: CCGACTTACCAAATCCTGTCATTCCTGTAGCTGTTT...TACCTGATGGATCCCTGTTCTCAGTGTTGTCAAGTCAGAGTGTGTTTCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | AATTGCATAGCGCTGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTCCGCTTTGTTTCGGTTaGTGCTCCCGACATTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NCIALHVYSLQQNKTEAIPLCFG*CSRHST Trigger: CGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGG...AATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCAGCGCTATGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | ATGACTGCCTCCCCCTCCCTCCAGATTCAAGAAGTTCACAATTCATTAGGAAACACTTCACATCCAGCTTaGGGTTGTACTGAGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MTASPSLQIQEVHNSLGNTSHPA*GCTELK Trigger: CTTTAGCTCAGTACAACCCCAAGCTGGATGTGAAGT...GTTTCCTAATGAATTGTGAACTTCTTGAATCTGGAGGGAGGGGGAGGCAGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATTCATTTGGATTTCCTaGGAAGTACGGGTGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTFWSPKSQLVAGKASEFIWIS*EVRVYS Trigger: GGAGTACACCCGTACTTCCCAGGAAATCCAAATGAA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | AGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTGGGATTACCGCTCCTGGGTTTaGCATTGTTCTTCAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: RTNSALHDNGDAGQLCWDYRSWV*HCSSNI Trigger: AATATTTGAAGAACAATGCCAAACCCAGGAGCGGTA...ATCCCAGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | AATTGCATAGCGCTGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTCAGGCCGGGCTTCCTaGCCATCACTGAATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NCIALHVYSLQQNKTEAISGRAS*PSLNPS Trigger: ACTTGGATTCAGTGATGGCCAGGAAGCCCGGCCTGA...AATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCAGCGCTATGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAACTCAACCACAGAGTTaGAGGTTAATGGATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTFWSPKSQLVAGKASETQPQS*RLMDQR Trigger: TCTCTGATCCATTAACCTTCAACTCTGTGGTTGAGT...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACGCCGTTCTTTTCATTTaGATTTCCTGGGAAGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKSQLVAGKASESVNAVLFI*ISWEVR Trigger: CCGTACTTCCCAGGAAATCCAAATGAAAAGAACGGC...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATACCATTCAGCATCCTaGAAGGACATATTGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTFWSPKSQLVAGKASEYHSAS*KDILLF Trigger: GAACAACAATATGTCCTTGCAGGATGCTGAATGGTA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | AATTGCATAGCGCTGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGCCGCACACCTTTCTaGGTCAGCCACATCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NCIALHVYSLQQNKTEAICRTPF*VSHIKY Trigger: ATACTTGATGTGGCTGACGCAGAAAGGTGTGCGGCA...AATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCAGCGCTATGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACCATTCAAAAGGTTTTTaGTGGAGGCTTGAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKSQLVAGKASESVNHSKGF*WRLERA Trigger: AGCTCTCTCAAGCCTCCAGCAAAAACCTTTTGAATG...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | TGGTGTTTCATTTTTCCTCCGAACAGACTGCATCAATGTTCTCTCAAAGTGTCCCTGGTATTTGGACACTaGGTAGAGCAACTTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: WCFIFPPNRLHQCSLKVSLVFGH*VEQLHI Trigger: GATGTGAAGTTGCTCTACCCAGTGTCCAAATACCAG...GGACACTTTGAGAGAACATTGATGCAGTCTGTTCGGAGGAAAAATGAAACACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATACCGCTCCTGGGTTTaGCATTGTTCTTCAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LSTFWSPKSQLVAGKASEYRSWV*HCSSNI Trigger: AATATTTGAAGAACAATGCCAAACCCAGGAGCGGTA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | CTGTGCTGGGATGGAGTTACAACATTAGGTCTGGAGTaGCTGTTAATTGCTAATGACTACCAAACTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LCWDGVTTLGLE*LLIANDYQTQM Trigger: CATCTGAGTTTGGTAGTCATTAGCAATTAACAGCAACTCCAGACCTAATGTTGTAACTCCATCCCAGCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | ACGCTAATGAGAAGACCTGTCCGAACTGTTAAATGTTaGCACTTAACAATCTCCACAAAGCACAGTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLMRRPVRTVKC*HLTISTKHSDH Trigger: GTGGTCACTGTGCTTTGTGGAGATTGTTAAGTGCAAACATTTAACAGTTCGGACAGGTCTTCTCATTAGCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | AATTTGGCATTTTGGAATGTTGTCCCATGGGAGGCATaGTGCTTCTTAACTGCCCCTTTCTTAAATGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLAFWNVVPWEA*CFLTAPFLNDP Trigger: AGGGTCATTTAAGAAAGGGGCAGTTAAGAAGCACAATGCCTCCCATGGGACAACATTCCAAAATGCCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACGTGCATTTTAGTAGATaGGTCTCGTACCAAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKSQLVAGKASESVNVHFSR*VSYQKG Trigger: ACCTTTTTGGTACGAGACGCATCTACTAAAATGCAC...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | ACTGGGGTAAGGGAAGCTTATTCCAAAGGTGTATTTGAAACGGGTAACAACATAGGGCTCTGTAGTTCTTaGGCTAAAGACATCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGVREAYSKGVFETGNNIGLCSS*AKDIIS Trigger: TGAGATGATGTCTTTAGCCCAAGAACTACAGAGCCC...TATGTTGTTACCCGTTTCAAATACACCTTTGGAATAAGCTTCCCTTACCCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | ATTCGAACAGACAACAAAACCCACTTTCCAACTGACTaGGATACCATGCATTGCGAAAGCACAGTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRTDNKTHFPTD*DTMHCESTVEK Trigger: TTTCTCAACTGTGCTTTCGCAATGCATGGTATCCAAGTCAGTTGGAAAGTGGGTTTTGTTGTCTGTTCGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACAAAACACCAAGTCTGTaGCACAGTTTATATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWSPKSQLVAGKASESVNKTPSL*HSLYLS Trigger: AGACAGATATAAACTGTGGCACAGACTTGGTGTTTT...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035532.13 |
||
| CDS-3UTR CCA 90 bp | TCTGTTGGTGGGTTGTTGGTTGCTGACTTGATAAGTTTAAACAAAAACGTTTTCGTCTTCTCGTCATGGTaGGGCAAATCCTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVGGLLVADLISLNKNVFVFSSW*GKSSSS Trigger: AGATGATGAGGATTTGCCCCACCATGACGAGAAGAC...GAAAACGTTTTTGTTTAAACTTATCAAGTCAGCAACCAACAACCCACCAACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGTAAGGGAAGCTTATTCCAAAGGTGTATTTGAAACGGGTAACAACATAGTGCATTTTAGTAGATaGGTCTCGTACCAAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGVREAYSKGVFETGNNIVHFSR*VSYQKG Trigger: ACCTTTTTGGTACGAGACGCATCTACTAAAATGCAC...TATGTTGTTACCCGTTTCAAATACACCTTTGGAATAAGCTTCCCTTACCCCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGGTGGGTTGTTGGTTGCTGACTTGATAAGTTTAAACAAAAACGTTTTCTCTTCTTTGACAACTTaGTCCTGCTGGTATTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVGGLLVADLISLNKNVFSSLTT*SCWYLD Trigger: GTCCAAATACCAGCAGGATCAAGTTGTCAAAGAAGA...GAAAACGTTTTTGTTTAAACTTATCAAGTCAGCAACCAACAACCCACCAACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | ACGTTTTCTGGTGTTTCATTTTTCCTCCGAACAGACTGCATCAATGTTCTCTCATCTCTATCGCTTTTATaGGGTGTTCAGTATTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFSGVSFFLRTDCINVLSSLSLL*GVQYYQ Trigger: CTGATAATACTGAACACCTCATAAAAGCGATAGAGA...TGAGAGAACATTGATGCAGTCTGTTCGGAGGAAAAATGAAACACCAGAAAACGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TCTGTTGGTGGGTTGTTGGTTGCTGACTTGATAAGTTTAAACAAAAACGTTTTCTCTCTATGTATTCTTTaGTGTACCGCTCCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVGGLLVADLISLNKNVFSLCIL*CTAPGF Trigger: AAACCCAGGAGCGGTACAGCAAAGAATACATAGAGA...GAAAACGTTTTTGTTTAAACTTATCAAGTCAGCAACCAACAACCCACCAACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | AATTGCATAGCGCTGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTCTCAGAGAGGACTCTTaGATTCAAAAGGTTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NCIALHVYSLQQNKTEAILREDS*IQKVFA Trigger: AGCAAAAACCTTTTGAATGCAAGAGTCCTCTCTGAG...AATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCAGCGCTATGCAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR TCA 90 bp | TGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGGTATTGATACATCTTCTTTGACAACTTaGTCCTGCTGGTATTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CTFIAFSKTKQKLFGIDTSSLTT*SCWYLD Trigger: GTCCAAATACCAGCAGGATCAAGTTGTCAAAGAAGA...TGTATCAATACCAAATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CCA 90 bp | TGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGGTATTGATACAATTCTGCAGGGTTGCTaGAGCTTTGTGTTCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: CTFIAFSKTKQKLFGIDTILQGC*SFVFCI Trigger: TATACAGAACACAAAGCTCCAGCAACCCTGCAGAAT...TGTATCAATACCAAATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR GCA 90 bp | TGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGGTATTGATACATACCATTCAGCATCCTaGAAGGACATATTGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTFIAFSKTKQKLFGIDTYHSAS*KDILLF Trigger: GAACAACAATATGTCCTTGCAGGATGCTGAATGGTA...TGTATCAATACCAAATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| 3UTR CAA 72 bp | ATTGCCAGGTACCGTATTTCAAGAGTCTTAACACTGTaGGACTCAGCAATACTTTGTCATATCATATATCAT | + |
|
Preference number: 4 (lower is better) Translates to: IARYRISRVLTL*DSAILCHIIYH Trigger: ATGATATATGATATGACAAAGTATTGCTGAGTCCAACAGTGTTAAGACTCTTGAAATACGGTACCTGGCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCAGGCGAATAGGTTCTCCGCTTaGTTTCGGTTGCTGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TTPSDTQATPGWTKRPQANRFSA*FRLLLP Trigger: CGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATT...CGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAGCGACACCCAGGCTACACCAGGCTGGACCAAGCGGCCCCAGGCGTTAATGACGCAATGCTaGACTTCGCCGTCTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: TTPSDTQATPGWTKRPQALMTQC*TSPSTT Trigger: AGTGGTAGACGGCGAAGTCAAGCATTGCGTCATTAA...CGCCTGGGGCCGCTTGGTCCAGCCTGGTGTAGCCTGGGTGTCGCTGGGTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS GCA 90 bp | AGCAGGCATAGCAGCCCTGCTTACTGCTCTCCCGGACAAGGAAAGTaGCGTCTCGCTTCCCTCGCAATAGGTTCTCCGCTTTGTTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRHSSPAYCSPGQGK*RLASLAIGSPLCFG Trigger: ACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGCGAGACGGCACTTTCCTTGTCCGGGAGAGCAGTAAGCAGGGCTGCTATGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS GCA 90 bp | CGTCTCGCTTCCCTCGCAATAGGTTCTCCGCTTTGTTTCGGTTGCTaGTCCCGACATTCCACGTCTTCTCGTCATGGTGGGGCAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLASLAIGSPLCFGC*SRHSTSSRHGGANP Trigger: AGGATTTGCCCCACCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGCGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS GCA 90 bp | TGCCGTCTCGCTTCCCTCGCAATAGGTTCTCCGCTTTGTTTCGGTTaGTGCTCCCGACATTCCACGTCTTCTCGTCATGGTGGGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CRLASLAIGSPLCFG*CSRHSTSSRHGGAN Trigger: ATTTGCCCCACCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGCGAGACGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | AGGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATACATTGAGGGAGTCATaGTGCTGCACGAGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLLRGLGWLEGEELDTLRES*CCTREV Trigger: CACCTCCCTCGTGCAGCACAATGACTCCCTCAATGT...ATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | GCAGACAGCCGGCTTCATTTCTGCAGCTCAGTTCACAGGTCGGGCTGGAGAGGATATGCTAGTGTGACATaGAGGGAGTCATTGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ADSRLHFCSSVHRSGWRGYASVT*RESLCC Trigger: GCAGCACAATGACTCCCTCAATGTCACACTAGCATA...TCCTCTCCAGCCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | GCAGACAGCCGGCTTCATTTCTGCAGCTCAGTTCACAGGTCGGGCTGGAGAGGAATACTGTTCATGCGTTaGTCGATCTCTCGGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ADSRLHFCSSVHRSGWRGILFMR*SISRYS Trigger: TGAGTACCGAGAGATCGACAAACGCATGAACAGTAT...TCCTCTCCAGCCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | GCAGACAGCCGGCTTCATTTCTGCAGCTCAGTTCACAGGTCGGGCTGGAGAGGAAACTCAACCACAGAGTaGAAGGTTAATGGATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ADSRLHFCSSVHRSGWRGNSTTE*KVNGSE Trigger: CTCTGATCCATTAACCTTCAACTCTGTGGTTGAGTT...TCCTCTCCAGCCCGACCTGTGAACTGAGCTGCAGAAATGAAGCCGGCTGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | GTCATCCAACAGTCCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAATAGGTTCTCCGCTTaGTTTCGGTTGCTGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VIQQSEAACLPRLLFVQENRFSA*FRLLLP Trigger: CGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATT...TTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGGACTGTTGGATGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | AGGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATTATGCTAGTGTGACATaGAGGGAGTCATTGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLLRGLGWLEGEELDYASVT*RESLCC Trigger: GCAGCACAATGACTCCCTCAATGTCACACTAGCATA...ATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCTTTGCTTCTCAGAGGCCTTGGGTGGCTTGAAGGTGAGGAACTGGATCTGCAAGGACATATTGTaGTTCATGCTGTTGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GALCFSEALGGLKVRNWICKDIL*FMLLLA Trigger: AGCCAACAACAGCATGAACAACAATATGTCCTTGCA...GATCCAGTTCCTCACCTTCAAGCCACCCAAGGCCTCTGAGAAGCAAAGGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGAACAAACTCAGCACTTCATGACAACGGAGATGCTGGCCAACTGTGCTCATTCACTTCTTCCCTaGAGATGTCTCCCCAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: TPEQTQHFMTTEMLANCAHSLLP*RCLPST Trigger: GGTACTGGGGAGACATCTCAAGGGAAGAAGTGAATG...AGCACAGTTGGCCAGCATCTCCGTTGTCATGAAGTGCTGAGTTTGTTCTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | CCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCTCTAGTCCCACAGTTTATATCTGTCTaGGCACACTCTAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRLRVFPDFFLSKKALVPQFISV*AHSKSR Trigger: CCTGGACTTAGAGTGTGCCAAGACAGATATAAACTG...TGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035532.13 |
||
| CDS-3UTR CAA 90 bp | CCGAGGCTGCGTGTCTTCCCCGACTTCTTTTTGTCCAAGAAAGCTCTAGTCCCAGTACCGCTCCTGGGTTaGGCATTGTTCTTCAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: PRLRVFPDFFLSKKALVPVPLLG*ALFFKY Trigger: ATATTTGAAGAACAATGCCAAACCCAGGAGCGGTAC...TGGGACTAGAGCTTTCTTGGACAAAAAGAAGTCGGGGAAGACACGCAGCCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | CATCCCAGCTATGCTGTATCTATCTGCATTCATGAGCCACTCGGTGTTACTAGATCCGCTTTGTTTCGGTaGCTGCTCCCGACATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HPSYAVSICIHEPLGVTRSALFR*LLPTFH Trigger: GTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGA...TCTAGTAACACCGAGTGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | CTCACAGAAACACACTCTGACTTGACAACACTGAGAACAGGGATCCATCAGGTAACATTGAGGGAGTCATaGTGCTGCACGAGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTETHSDLTTLRTGIHQVTLRES*CCTREV Trigger: CACCTCCCTCGTGCAGCACAATGACTCCCTCAATGT...TACCTGATGGATCCCTGTTCTCAGTGTTGTCAAGTCAGAGTGTGTTTCTGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS CCA 90 bp | AGCTTCTTCTGCCGCACACCTTTCTGCGTCAGCCACATCAAGTATTaGTCTCTTGTCTTTCTCAACTGGATGAGGTCCGGCTTAATACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFCRTPFCVSHIKY*SLVFLNWMRSGLIL Trigger: CAGTATTAAGCCGGACCTCATCCAGTTGAGAAAGACAAGAGACCAATACTTGATGTGGCTGACGCAGAAAGGTGTGCGGCAGAAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TTGTCCAAGAAAGCTCTAGTCCCATGTGCAGACAGCCGGCTTCATTTCTGCAGCAGCCGTTCTTTTCATTaGGATTTCCTGGGAAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: LSKKALVPCADSRLHFCSSRSFH*DFLGST Trigger: CGTACTTCCCAGGAAATCCAAATGAAAAGAACGGCT...GCTGCAGAAATGAAGCCGGCTGTCTGCACATGGGACTAGAGCTTTCTTGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS GCA 90 bp | CTGACGCGGCATCACAATCAAGAAGCTGTCGTAATTCTGCAGGGTTaGTGGAGCTTTGTGTTCTGTATAGAGTCGAACATTCCAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTRHHNQEAVVILQG*WSFVFCIESNIPVL Trigger: AAGGACTGGAATGTTCGACTCTATACAGAACACAAAGCTCCAGCAACCCTGCAGAATTACGACAGCTTCTTGATTGTGATGCCGCGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS CCA 90 bp | ACGCGGCATCACAATCAAGAAGCTGTCGTAATTCTGCAGGGTTGCTaGAGCTTTGTGTTCTGTATAGAGTCGAACATTCCAGTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TRHHNQEAVVILQGC*SFVFCIESNIPVLS Trigger: AGAAAGGACTGGAATGTTCGACTCTATACAGAACACAAAGCTCCAGCAACCCTGCAGAATTACGACAGCTTCTTGATTGTGATGCCGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | AGCCACTCGGTGTTACTAGAAGATGGCTTGGATGGAATCCACAGAACCTTAATGAGCCGTTCTTTTCATTaGGATTTCCTGGGAAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: SHSVLLEDGLDGIHRTLMSRSFH*DFLGST Trigger: CGTACTTCCCAGGAAATCCAAATGAAAAGAACGGCT...CATTAAGGTTCTGTGGATTCCATCCAAGCCATCTTCTAGTAACACCGAGTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAGTACCGCTCCTGGGTTaGGCATTGTTCTTCAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: LSTFWSPKSQLVAGKASEVPLLG*ALFFKY Trigger: ATATTTGAAGAACAATGCCAAACCCAGGAGCGGTAC...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATTCTCTATGTATTCTTaGCTGTACCGCTCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSTFWSPKSQLVAGKASEFSMYS*LYRSWV Trigger: AACCCAGGAGCGGTACAGCAAAGAATACATAGAGAA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS-3UTR CAA 90 bp | AGCCACTCGGTGTTACTAGAAGATGGCTTGGATGGAATCCACAGAACCTTAATGTTCTCTATGTATTCTTaGCTGTACCGCTCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHSVLLEDGLDGIHRTLMFSMYS*LYRSWV Trigger: AACCCAGGAGCGGTACAGCAAAGAATACATAGAGAA...CATTAAGGTTCTGTGGATTCCATCCAAGCCATCTTCTAGTAACACCGAGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | CTGTCTACCTTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAATCCTGCAAGGACATATaGTTGTTCATGCTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSTFWSPKSQLVAGKASESCKDI*LFMLLL Trigger: CAACAACAGCATGAACAACAATATGTCCTTGCAGGA...TTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAAGGTAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS-3UTR CAA 90 bp | ACTGGGGTAAGGGAAGCTTATTCCAAAGGTGTATTTGAAACGGGTAACAACATACATTCACTTCTTCCCTaGAGATGTCTCCCCAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: TGVREAYSKGVFETGNNIHSLLP*RCLPST Trigger: GGTACTGGGGAGACATCTCAAGGGAAGAAGTGAATG...TATGTTGTTACCCGTTTCAAATACACCTTTGGAATAAGCTTCCCTTACCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TCTGTTGGTGGGTTGTTGGTTGCTGACTTGATAAGTTTAAACAAAAACGTTTTCTCCGCTTTGTTTCGGTaGCTGCTCCCGACATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVGGLLVADLISLNKNVFSALFR*LLPTFH Trigger: GTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGA...GAAAACGTTTTTGTTTAAACTTATCAAGTCAGCAACCAACAACCCACCAACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGTAAGGGAAGCTTATTCCAAAGGTGTATTTGAAACGGGTAACAACATATTGTTCATGCTGTTGTaGGCTACAGTAGTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGVREAYSKGVFETGNNILFMLL*ATVVGL Trigger: CAAGCCCACTACTGTAGCCAACAACAGCATGAACAA...TATGTTGTTACCCGTTTCAAATACACCTTTGGAATAAGCTTCCCTTACCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS-3UTR CAA 90 bp | TGGTGTTTCATTTTTCCTCCGAACAGACTGCATCAATGTTCTCTCAAAGTGTCCATACTGTTCATGCGTTaGTCGATCTCTCGGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: WCFIFPPNRLHQCSLKVSILFMR*SISRYS Trigger: TGAGTACCGAGAGATCGACAAACGCATGAACAGTAT...GGACACTTTGAGAGAACATTGATGCAGTCTGTTCGGAGGAAAAATGAAACACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACCAGCCACATCAAGTATaGGTCTCTTGTCTTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FWSPKSQLVAGKASESVNQPHQV*VSCLSQ Trigger: TTGAGAAAGACAAGAGACCAATACTTGATGTGGCTG...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGTAAGGGAAGCTTATTCCAAAGGTGTATTTGAAACGGGTAACAACATATTAATGACGCAATGCTaGACTTCGCCGTCTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: TGVREAYSKGVFETGNNILMTQC*TSPSTT Trigger: AGTGGTAGACGGCGAAGTCAAGCATTGCGTCATTAA...TATGTTGTTACCCGTTTCAAATACACCTTTGGAATAAGCTTCCCTTACCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | AATTGCATAGCGCTGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTCGTAATTCTGCAGGGTaGCTGGAGCTTTGTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NCIALHVYSLQQNKTEAIRNSAG*LELCVL Trigger: CAGAACACAAAGCTCCAGCAACCCTGCAGAATTACG...AATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCAGCGCTATGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TGGTGTTTCATTTTTCCTCCGAACAGACTGCATCAATGTTCTCTCAAAGTGTCCTCCTGCAAGGACATATaGTTGTTCATGCTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WCFIFPPNRLHQCSLKVSSCKDI*LFMLLL Trigger: CAACAACAGCATGAACAACAATATGTCCTTGCAGGA...GGACACTTTGAGAGAACATTGATGCAGTCTGTTCGGAGGAAAAATGAAACACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTCTCCAAAGTCCCAACTTGTAGCTGGTAAAGCTTCAGAAAGCGTTAACATCTTCTTTGACAACTaGATCCTGCTGGTATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FWSPKSQLVAGKASESVNIFFDN*ILLVFG Trigger: TCCAAATACCAGCAGGATCAAGTTGTCAAAGAAGAT...GTTAACGCTTTCTGAAGCTTTACCAGCTACAAGTTGGGACTTTGGAGACCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | CATCCCAGCTATGCTGTATCTATCTGCATTCATGAGCCACTCGGTGTTACTAGATCTCATTCCATTCCGTaGAGATTAAAATCTCTATCG | + |
|
Preference number: 5 (lower is better) Translates to: HPSYAVSICIHEPLGVTRSHSIP*RLKSLS Trigger: CGATAGAGATTTTAATCTCAACGGAATGGAATGAGA...TCTAGTAACACCGAGTGGCTCATGAATGCAGATAGATACAGCATAGCTGGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TCTGTTGGTGGGTTGTTGGTTGCTGACTTGATAAGTTTAAACAAAAACGTTTTCTTGTTCATGCTGTTGTaGGCTACAGTAGTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVGGLLVADLISLNKNVFLFMLL*ATVVGL Trigger: CAAGCCCACTACTGTAGCCAACAACAGCATGAACAA...GAAAACGTTTTTGTTTAAACTTATCAAGTCAGCAACCAACAACCCACCAACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGCAGGTGTGTCTGATATTGAGAAAGAGAAACTGATGATGGCTCATGAATGCAAGGACATATTGTaGTTCATGCTGTTGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAAGVSDIEKEKLMMAHECKDIL*FMLLLA Trigger: AGCCAACAACAGCATGAACAACAATATGTCCTTGCA...TTCATGAGCCATCATCAGTTTCTCTTTCTCAATATCAGACACACCTGCAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGTAAGGGAAGCTTATTCCAAAGGTGTATTTGAAACGGGTAACAACATAATCTTCTTTGACAACTaGATCCTGCTGGTATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGVREAYSKGVFETGNNIIFFDN*ILLVFG Trigger: TCCAAATACCAGCAGGATCAAGTTGTCAAAGAAGAT...TATGTTGTTACCCGTTTCAAATACACCTTTGGAATAAGCTTCCCTTACCCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGGTATTGATACAAACTCAACCACAGAGTaGAAGGTTAATGGATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CTFIAFSKTKQKLFGIDTNSTTE*KVNGSE Trigger: CTCTGATCCATTAACCTTCAACTCTGTGGTTGAGTT...TGTATCAATACCAAATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGGTATTGATACACAGCCACATCAAGTATaGGTCTCTTGTCTTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CTFIAFSKTKQKLFGIDTQPHQV*VSCLSQ Trigger: TTGAGAAAGACAAGAGACCAATACTTGATGTGGCTG...TGTATCAATACCAAATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS-3UTR CAA 90 bp | TGCACGTTTATAGCCTTCAGCAAAACAAAACAGAAGCTATTTGGTATTGATACATCTCAGAGAGGACTCTaGCATTCAAAAGGTTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CTFIAFSKTKQKLFGIDTSQRGL*HSKGFC Trigger: GCAAAAACCTTTTGAATGCAAGAGTCCTCTCTGAGA...TGTATCAATACCAAATAGCTTCTGTTTTGTTTTGCTGAAGGCTATAAACGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS TCA 72 bp | GGGCAACGCTTGCTGCTCCGTGTCAGCTTCAGTTTTTaGAGAACCCGGAGCAACAGGAAGCGGTCGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GQRLLLRVSFSF*RTRSNRKRSRG Trigger: CCCCCTCGACCGCTTCCTGTTGCTCCGGGTTCTTCAAAAACTGAAGCTGACACGGAGCAGCAAGCGTTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
||
| CDS GCA 72 bp | AGCAGCCCTGCTTACTGCTCTCCCGGACAAGGAAAGTaGCGTCTCGCTTCCCTCGCAATAGGTTCTCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSPAYCSPGQGK*RLASLAIGSPL Trigger: AAGCGGAGAACCTATTGCGAGGGAAGCGAGACGGCACTTTCCTTGTCCGGGAGAGCAGTAAGCAGGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS CAA 90 bp | GTGCCGTCTCGCTTCCCTCGCAATAGGTTCTCCGCTTTGTTTCGGTaGCTGCTCCCGACATTCCACGTCTTCTCGTCATGGTGGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VPSRFPRNRFSALFR*LLPTFHVFSSWWGK Trigger: TTTGCCCCACCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGCGAGACGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS CAA 72 bp | GTGCCGTCTCGCTTCCCTCGCAATAGGTTCTCCGCTTaGTTTCGGTTGCTGCTCCCGACATTCCACGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VPSRFPRNRFSA*FRLLLPTFHVF Trigger: GAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGCGAGACGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
||
| CDS GCA 72 bp | TCCCTCGCAATAGGTTCTCCGCTTTGTTTCGGTTGCTaGTCCCGACATTCCACGTCTTCTCGTCATGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLAIGSPLCFGC*SRHSTSSRHGG Trigger: CCCACCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CCA 72 bp | CGGTTGCTGCTCCCGACATTCCACGTCTTCTCGTCATaGTGGGGCAAATCCTCATCATCTTCTACCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RLLLPTFHVFSS*WGKSSSSSTRE Trigger: CTCCCTGGTAGAAGATGATGAGGATTTGCCCCACCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CAA 72 bp | CGCTTCCCTCGCAATAGGTTCTCCGCTTTGTTTCGGTaGCTGCTCCCGACATTCCACGTCTTCTCGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: RFPRNRFSALFR*LLPTFHVFSSW Trigger: CCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CAA 90 bp | ACAAGGAAAGTGCCGTCTCGCTTCCCTCGCAATAGGTTCTCCGCTTaGTTTCGGTTGCTGCTCCCGACATTCCACGTCTTCTCGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: TRKVPSRFPRNRFSA*FRLLLPTFHVFSSW Trigger: CCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGCGAGACGGCACTTTCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS GCA 72 bp | GCTTCCCTCGCAATAGGTTCTCCGCTTTGTTTCGGTTaGTGCTCCCGACATTCCACGTCTTCTCGTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: ASLAIGSPLCFG*CSRHSTSSRHG Trigger: ACCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAACCGAAACAAAGCGGAGAACCTATTGCGAGGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CCA 72 bp | CCATTTAACCAGCCAATATCTTCAGGCCGGGCTTCCTaGCCATCACTGAATCCAAGTGCCACTAAGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PFNQPISSGRAS*PSLNPSATKEP Trigger: AGGCTCCTTAGTGGCACTTGGATTCAGTGATGGCCAGGAAGCCCGGCCTGAAGATATTGGCTGGTTAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| CDS CAA 72 bp | CTGCCGCACACCTTTCTGCGTCAGCCACATCAAGTATaGGTCTCTTGTCTTTCTCAACTGGATGAGGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LPHTFLRQPHQV*VSCLSQLDEVR Trigger: CCGGACCTCATCCAGTTGAGAAAGACAAGAGACCAATACTTGATGTGGCTGACGCAGAAAGGTGTGCGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CCA 72 bp | TTGCTGCTCCCGACATTCCACGTCTTCTCGTCATGGTaGGGCAAATCCTCATCATCTTCTACCAGGGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: LLLPTFHVFSSW*GKSSSSSTREY Trigger: ATACTCCCTGGTAGAAGATGATGAGGATTTGCCCCACCATGACGAGAAGACGTGGAATGTCGGGAGCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS GCA 72 bp | GTATTTTCATTCCCCAGCCACTCGTTCAGCTTCTTCTaGCGCACACCTTTCTGCGTCAGCCACATCAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: VFSFPSHSFSFF*RTPFCVSHIKY Trigger: ATACTTGATGTGGCTGACGCAGAAAGGTGTGCGGCAGAAGAAGCTGAACGAGTGGCTGGGGAATGAAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CAA 72 bp | TCAGCATCCTGCAAGGACATATTGTTGTTCATGCTGTaGTTGGCTACAGTAGTGGGCTTGGGTGGTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SASCKDILLFML*LATVVGLGGLG Trigger: CCCCAAACCACCCAAGCCCACTACTGTAGCCAACAACAGCATGAACAACAATATGTCCTTGCAGGATGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 ENSMUST00000185795.2 |
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| CDS CAA 90 bp | CAGCTTCTTCTGCCGCACACCTTTCTGCGTCAGCCACATCAAGTATaGGTCTCTTGTCTTTCTCAACTGGATGAGGTCCGGCTTAATACT | + |
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Preference number: 6 (lower is better) Translates to: QLLLPHTFLRQPHQV*VSCLSQLDEVRLNT Trigger: AGTATTAAGCCGGACCTCATCCAGTTGAGAAAGACAAGAGACCAATACTTGATGTGGCTGACGCAGAAAGGTGTGCGGCAGAAGAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CAA 90 bp | ACTGACGCGGCATCACAATCAAGAAGCTGTCGTAATTCTGCAGGGTaGCTGGAGCTTTGTGTTCTGTATAGAGTCGAACATTCCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TDAASQSRSCRNSAG*LELCVLYRVEHSSP Trigger: AGGACTGGAATGTTCGACTCTATACAGAACACAAAGCTCCAGCAACCCTGCAGAATTACGACAGCTTCTTGATTGTGATGCCGCGTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| CDS CCA 72 bp | GGTATATTAGGCAATCTAATGAGCTTCTTCAACAGCTaGATGCAGTCTTCAGGGCTCTGTAGTTCTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GILGNLMSFFNS*MQSSGLCSSWA Trigger: AGCCCAAGAACTACAGAGCCCTGAAGACTGCATCCAGCTGTTGAAGAAGCTCATTAGATTGCCTAATATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| CDS CCA 72 bp | CACAATCAAGAAGCTGTCGTAATTCTGCAGGGTTGCTaGAGCTTTGTGTTCTGTATAGAGTCGAACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: HNQEAVVILQGC*SFVFCIESNIP Trigger: TGGAATGTTCGACTCTATACAGAACACAAAGCTCCAGCAACCCTGCAGAATTACGACAGCTTCTTGATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| CDS CAA 72 bp | TCGTTGCCTTCGCGTTTAAACTTCTCTATGTATTCTTaGCTGTACCGCTCCTGGGTTTGGCATTGTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLPSRLNFSMYS*LYRSWVWHCSS Trigger: TGAAGAACAATGCCAAACCCAGGAGCGGTACAGCAAAGAATACATAGAGAAGTTTAAACGCGAAGGCAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035532.13 ENSMUST00000055518.13 |
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| CDS CAA 72 bp | GCATCACAATCAAGAAGCTGTCGTAATTCTGCAGGGTaGCTGGAGCTTTGTGTTCTGTATAGAGTCGAACAT | + |
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Preference number: 6 (lower is better) Translates to: ASQSRSCRNSAG*LELCVLYRVEH Trigger: ATGTTCGACTCTATACAGAACACAAAGCTCCAGCAACCCTGCAGAATTACGACAGCTTCTTGATTGTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| CDS GCA 72 bp | CATCACAATCAAGAAGCTGTCGTAATTCTGCAGGGTTaGTGGAGCTTTGTGTTCTGTATAGAGTCGAACATT | + |
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Preference number: 6 (lower is better) Translates to: HHNQEAVVILQG*WSFVFCIESNI Trigger: AATGTTCGACTCTATACAGAACACAAAGCTCCAGCAACCCTGCAGAATTACGACAGCTTCTTGATTGTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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| CDS TCA 72 bp | TCCATTCCGTTGAGATTAAAATCTCTATCGCTTTTATaGGGTGTTCAGTATTATCAGAGCTGGCGGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SIPLRLKSLSLL*GVQYYQSWRLE Trigger: TTCCAGCCGCCAGCTCTGATAATACTGAACACCTCATAAAAGCGATAGAGATTTTAATCTCAACGGAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055518.13 |
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