Pregenerated sensors for PIK3IP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034614Ensembl transcript IDs: ENSMUST00000045153.11, ENSMUST00000093399.11, ENSMUST00000136474.2, ENSMUST00000136536.8, ENSMUST00000138907.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGCTCCCAGTGTTGGGAGTGGAAGGGCTCCTGGCTGGGGACACTaGCAAGGCCAGGAGGACACTGGGAAGCTGCTTTGCCCTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: PAPSVGSGRAPGWGH*QGQEDTGKLLCPFW Trigger: CCAGAAAGGGCAAAGCAGCTTCCCAGTGTCCTCCTGGCCTTGGCAGTGTCCCCAGCCAGGAGCCCTTCCACTCCCAACACTGGGAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 90 bp | CTCCTGGCTGGGGACACTGCCAAGGCCAGGAGGACACTGGGAAGCTaGTTTGCCCTTTCTGGAACTCCTTCAGGTCTTTCGCAGTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LLAGDTAKARRTLGS*FALSGTPSGLSQWC Trigger: GCACCACTGCGAAAGACCTGAAGGAGTTCCAGAAAGGGCAAAGCAGCTTCCCAGTGTCCTCCTGGCCTTGGCAGTGTCCCCAGCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR TCA 90 bp | CACCATGGGAACCCTGAGATCCAGGCCCCCTCAACAAATGGCTTATaGGAGCAGCCTGGTGAAGCCTGCTCCCAGTGTTGGGAGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: HHGNPEIQAPSTNGL*EQPGEACSQCWEWK Trigger: CTTCCACTCCCAACACTGGGAGCAGGCTTCACCAGGCTGCTCTCATAAGCCATTTGTTGAGGGGGCCTGGATCTCAGGGTTCCCATGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR CCA 90 bp | TTGGCCCAGGCAATGTGGAAGCCCTTATTTGCCACAGCACCACTGTaGCTACTGTGCCAGTCTCTCTCCGCAGGCAAATTCTGCTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LAQAMWKPLFATAPL*LLCQSLSAGKFCSK Trigger: CTTGGAGCAGAATTTGCCTGCGGAGAGAGACTGGCACAGTAGCCACAGTGGTGCTGTGGCAAATAAGGGCTTCCACATTGCCTGGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR TCA 90 bp | CGGAGCATGATGACAAGGGCTCAGAAATCCCATTTTCCAAGAGGTTaGGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCACCAGGC | + |
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Preference number: 1 (lower is better) Translates to: RSMMTRAQKSHFPRG*DRRIPCPEGPRSPG Trigger: GCCTGGTGATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAATGGGATTTCTGAGCCCTTGTCATCATGCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
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| 3UTR CCA 90 bp | CGCAGTGGTGCAGTGATTGTTTTGTACCAGTTAATCTTAACCCTATaGAAGGAACTGGCCTGCAAGCCCGGCAGGACTACAACGCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: RSGAVIVLYQLILTL*KELACKPGRTTTQA Trigger: GGCTTGCGTTGTAGTCCTGCCGGGCTTGCAGGCCAGTTCCTTCCATAGGGTTAAGATTAACTGGTACAAAACAATCACTGCACCACTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 90 bp | TGGGATAAGGTTTTAACCACAACACAAAATGTAGCTCCTCCCAACTaGAGGAGGGTGGCCTGTCCTGTACCAGTGTTTACATGGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: WDKVLTTTQNVAPPN*RRVACPVPVFTWAP Trigger: AGGTGCCCATGTAAACACTGGTACAGGACAGGCCACCCTCCTGCAGTTGGGAGGAGCTACATTTTGTGTTGTGGTTAAAACCTTATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 90 bp | CATGTTACCAACCTTCTGGCTTGGTCTCCAAGCTCACCTTTCAGCTaGGGGTCACCACACTCTCAAGTGTGTAATTCCCATGAATTGGCT | + |
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Preference number: 1 (lower is better) Translates to: HVTNLLAWSPSSPFS*GSPHSQVCNSHELA Trigger: AGCCAATTCATGGGAATTACACACTTGAGAGTGTGGTGACCCGCAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR TCA 90 bp | TATATGCCACTCAAGTTCCTGGATGACGAATGGAAAAGCAGAGACTaGGGCCACCTTCTTCAGTATACAGGACAGAAGAGCTTTAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: YMPLKFLDDEWKSRD*GHLLQYTGQKSFSQ Trigger: CTGGCTAAAGCTCTTCTGTCCTGTATACTGAAGAAGGTGGCCTCAGTCTCTGCTTTTCCATTCGTCATCCAGGAACTTGAGTGGCATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR CCA 90 bp | GGAAGCTGCTTTGCCCTTTCTGGAACTCCTTCAGGTCTTTCGCAGTaGTGCAGTGATTGTTTTGTACCAGTTAATCTTAACCCTATGGAA | + |
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Preference number: 1 (lower is better) Translates to: GSCFALSGTPSGLSQ*CSDCFVPVNLNPME Trigger: TTCCATAGGGTTAAGATTAACTGGTACAAAACAATCACTGCACCACTGCGAAAGACCTGAAGGAGTTCCAGAAAGGGCAAAGCAGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR CCA 90 bp | TGCTTGACCTTAACTAGGAATAACAGTATATGCCACTCAAGTTCCTaGATGACGAATGGAAAAGCAGAGACTGAGGCCACCTTCTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: CLTLTRNNSICHSSS*MTNGKAETEATFFS Trigger: ACTGAAGAAGGTGGCCTCAGTCTCTGCTTTTCCATTCGTCATCCAGGAACTTGAGTGGCATATACTGTTATTCCTAGTTAAGGTCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR CAA 90 bp | TGGCTGGGGACACTGCCAAGGCCAGGAGGACACTGGGAAGCTGCTTaGCCCTTTCTGGAACTCCTTCAGGTCTTTCGCAGTGGTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: WLGTLPRPGGHWEAA*PFLELLQVFRSGAV Trigger: CACTGCACCACTGCGAAAGACCTGAAGGAGTTCCAGAAAGGGCAAAGCAGCTTCCCAGTGTCCTCCTGGCCTTGGCAGTGTCCCCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR CAA 90 bp | GGCAGGACTACAACGCAAGCCCCAGCATGTTACCAACCTTCTGGCTaGGTCTCCAAGCTCACCTTTCAGCTGCGGGTCACCACACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GRTTTQAPACYQPSG*VSKLTFQLRVTTLS Trigger: TGAGAGTGTGGTGACCCGCAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATGCTGGGGCTTGCGTTGTAGTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTCAGACAGGGGCAAGGTaGTTCGCTGCATCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LVAVHNDGVFIHGLTGGVQTGAR*FAASPS Trigger: AGAGGGAGATGCAGCGAATCACCTTGCCCCTGTCTG...AACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTCACCACCACCATGGGAACCCTGAGATCCAGGCCCCCTCAACAAATGGCTCTGCTTTGCCCTTTCTaGAACTCCTTCAGGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: TVTTTMGTLRSRPPQQMALLCPF*NSFRSF Trigger: GAAAGACCTGAAGGAGTTCCAGAAAGGGCAAAGCAG...AGCCATTTGTTGAGGGGGCCTGGATCTCAGGGTTCCCATGGTGGTGGTGACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTTGTGAAGGGCAAGGTGATTCGCTaGATCTCCCTCTCACACGCT | + |
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Preference number: 2 (lower is better) Translates to: LCTMMVFSSTVSQVGFVKGKVIR*ISLSHA Trigger: AGCGTGTGAGAGGGAGATGCAGCGAATCACCTTGCC...CTTCACAAACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCAAGCAGATTCATTTCAGGTTCTTAGAAGTCAGAAGGGACTTTCATCCGTAGCTCCTCCCAACTaGAGGAGGGTGGCCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CQQADSFQVLRSQKGLSSVAPPN*RRVACP Trigger: AGGACAGGCCACCCTCCTGCAGTTGGGAGGAGCTAC...GGATGAAAGTCCCTTCTGACTTCTAAGAACCTGAAATGAATCTGCTTGCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCAAGCAGATTCATTTCAGGTTCTTAGAAGTCAGAAGGGACTTTCATCCCTCCCAGTCTTTCCTTaGCCCAGGCAATGTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: CQQADSFQVLRSQKGLSSLPVFP*PRQCGS Trigger: GCTTCCACATTGCCTGGGCCAAGGAAAGACTGGGAG...GGATGAAAGTCCCTTCTGACTTCTAAGAACCTGAAATGAATCTGCTTGCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGCAAGCAGATTCATTTCAGGTTCTTAGAAGTCAGAAGGGACTTTCATCCAGGAATAACAGTATATaGCACTCAAGTTCCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: CQQADSFQVLRSQKGLSSRNNSI*HSSSWM Trigger: CATCCAGGAACTTGAGTGGCATATACTGTTATTCCT...GGATGAAAGTCCCTTCTGACTTCTAAGAACCTGAAATGAATCTGCTTGCTGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR TCA 72 bp | GGCCCCCTCAACAAATGGCTTATGAGAGCAGCCTGGTaGAGCCTGCTCCCAGTGTTGGGAGTGGAAGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: GPLNKWLMRAAW*SLLPVLGVEGL Trigger: GAGCCCTTCCACTCCCAACACTGGGAGCAGGCTTCACCAGGCTGCTCTCATAAGCCATTTGTTGAGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR TCA 72 bp | AACCCTGAGATCCAGGCCCCCTCAACAAATGGCTTATaGGAGCAGCCTGGTGAAGCCTGCTCCCAGTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: NPEIQAPSTNGL*EQPGEACSQCW Trigger: CCAACACTGGGAGCAGGCTTCACCAGGCTGCTCTCATAAGCCATTTGTTGAGGGGGCCTGGATCTCAGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCAGCATGTTACCAACCTTCTGGCTTGGTCTCCAAGCTCACCTTTCAGCTAGGCCTATCCCACAGTaGTCAAGGCACATCGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SPSMLPTFWLGLQAHLSARPIPQ*SRHIAA Trigger: GGCAGCGATGTGCCTTGACAACTGTGGGATAGGCCT...AGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATGCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | CAGCCCCCAAAAGACAGTCTGGATATTCTGGTCTGCTaGATGAGGCTGAAGGCAGAAGCGGGTCCTTCACCT | + |
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Preference number: 3 (lower is better) Translates to: QPPKDSLDILVC*MRLKAEAGPSP Trigger: AGGTGAAGGACCCGCTTCTGCCTTCAGCCTCATGCAGCAGACCAGAATATCCAGACTGTCTTTTGGGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR CCA 72 bp | GACTACAACGCAAGCCCCAGCATGTTACCAACCTTCTaGCTTGGTCTCCAAGCTCACCTTTCAGCTGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: DYNASPSMLPTF*LGLQAHLSAAG Trigger: ACCCGCAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATGCTGGGGCTTGCGTTGTAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR CAA 90 bp | CTCTATCCAGCCCCCAAAAGACAGTCTGGATATTCTGGTCTGCTGCATGAGGCTGCTCCCAGTCTTTCCTaGGCCCAGGCAATGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LYPAPKRQSGYSGLLHEAAPSLS*AQAMWK Trigger: CTTCCACATTGCCTGGGCCAAGGAAAGACTGGGAGC...AGCCTCATGCAGCAGACCAGAATATCCAGACTGTCTTTTGGGGGCTGGATAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | CTACCCAGCCTCCTCACCCTCACCCATAATGCTACCTaGATCTTCTTGTGTCATGAGGAGTCACATTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: LPSLLTLTHNAT*IFLCHEESHSP Trigger: GGGGGAATGTGACTCCTCATGACACAAGAAGATGCAGGTAGCATTATGGGTGAGGGTGAGGAGGCTGGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | AAGCCCTTATTTGCCACAGCACCACTGTGGCTACTGTaGCAGTCTCTCTCCGCAGGCAAATTCTGCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: KPLFATAPLWLL*QSLSAGKFCSK Trigger: CTTGGAGCAGAATTTGCCTGCGGAGAGAGACTGGCACAGTAGCCACAGTGGTGCTGTGGCAAATAAGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | TCTTTCCTTGGCCCAGGCAATGTGGAAGCCCTTATTTaGCACAGCACCACTGTGGCTACTGTGCCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SFLGPGNVEALI*HSTTVATVPVS Trigger: AGAGACTGGCACAGTAGCCACAGTGGTGCTGTGGCAAATAAGGGCTTCCACATTGCCTGGGCCAAGGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | ATCCAGCCCCCAAAAGACAGTCTGGATATTCTGGTCTaGTGCATGAGGCTGAAGGCAGAAGCGGGTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: IQPPKDSLDILV*CMRLKAEAGPS Trigger: TGAAGGACCCGCTTCTGCCTTCAGCCTCATGCAGCAGACCAGAATATCCAGACTGTCTTTTGGGGGCTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR TCA 72 bp | ATGACAAGGGCTCAGAAATCCCATTTTCCAAGAGGTTaGGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: MTRAQKSHFPRG*DRRIPCPEGPR Trigger: TCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAATGGGATTTCTGAGCCCTTGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
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| 3UTR GCA 72 bp | AACCTTCTGGCTTGGTCTCCAAGCTCACCTTTCAGCTaGGGGTCACCACACTCTCAAGTGTGTAATTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: NLLAWSPSSPFS*GSPHSQVCNSH Trigger: ATGGGAATTACACACTTGAGAGTGTGGTGACCCGCAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCACATGCCTTACTTCCTTTaGAAAGACGCCAAGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: IFQEVETGGFLALRAQDHMPYFL*KDAKKL Trigger: CAGCTTCTTGGCGTCTTTCAAAAGGAAGTAAGGCAT...GTGATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
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| 3UTR TCA 72 bp | CTCAAGTTCCTGGATGACGAATGGAAAAGCAGAGACTaGGGCCACCTTCTTCAGTATACAGGACAGAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LKFLDDEWKSRD*GHLLQYTGQKS Trigger: GCTCTTCTGTCCTGTATACTGAAGAAGGTGGCCTCAGTCTCTGCTTTTCCATTCGTCATCCAGGAACTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | GTTTTAACCACAACACAAAATGTAGCTCCTCCCAACTaGAGGAGGGTGGCCTGTCCTGTACCAGTGTTTACA | + |
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Preference number: 3 (lower is better) Translates to: VLTTTQNVAPPN*RRVACPVPVFT Trigger: TGTAAACACTGGTACAGGACAGGCCACCCTCCTGCAGTTGGGAGGAGCTACATTTTGTGTTGTGGTTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCACACTATTGAGCTGATTTaGATTCAATGCCTTACTTCC | + |
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Preference number: 3 (lower is better) Translates to: IFQEVETGGFLALRAQDHTIELI*IQCLTS Trigger: GGAAGTAAGGCATTGAATCAAAATCAGCTCAATAGT...GTGATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
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| 3UTR TCA 72 bp | CTAGGAATAACAGTATATGCCACTCAAGTTCCTGGATaGCGAATGGAAAAGCAGAGACTGAGGCCACCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LGITVYATQVPG*RMEKQRLRPPS Trigger: AGAAGGTGGCCTCAGTCTCTGCTTTTCCATTCGTCATCCAGGAACTTGAGTGGCATATACTGTTATTCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | GCCCTTTCTGGAACTCCTTCAGGTCTTTCGCAGTGGTaGAGTGATTGTTTTGTACCAGTTAATCTTAACCCT | + |
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Preference number: 3 (lower is better) Translates to: ALSGTPSGLSQW*SDCFVPVNLNP Trigger: AGGGTTAAGATTAACTGGTACAAAACAATCACTGCACCACTGCGAAAGACCTGAAGGAGTTCCAGAAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR-3UTR CAA 90 bp | TTTTTATGCTTGACCTTAACTAGGAATAACAGTATATGCCACTCAAGTTCCTGGTGTGGAAGCCCTTATTaGCCACAGCACCACTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: FLCLTLTRNNSICHSSSWCGSPY*PQHHCG Trigger: GCCACAGTGGTGCTGTGGCAAATAAGGGCTTCCACA...CCAGGAACTTGAGTGGCATATACTGTTATTCCTAGTTAAGGTCAAGCATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR CCA 72 bp | GGTCACCACACTCTCAAGTGTGTAATTCCCATGAATTaGCTATTTTCTTATCAGCGCAAAATTGAGAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: GHHTLKCVIPMN*LFSYQRKIERF Trigger: GAACCTCTCAATTTTGCGCTGATAAGAAAATAGCCAATTCATGGGAATTACACACTTGAGAGTGTGGTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| 3UTR GCA 72 bp | TTTTTATGCTTGACCTTAACTAGGAATAACAGTATATaGCACTCAAGTTCCTGGATGACGAATGGAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: FLCLTLTRNNSI*HSSSWMTNGKA Trigger: TGCTTTTCCATTCGTCATCCAGGAACTTGAGTGGCATATACTGTTATTCCTAGTTAAGGTCAAGCATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| CDS-3UTR CCA 90 bp | TACCAACCTTCTGGCTTGGTCTCCAAGCTCACCTTTCAGCTGCGGGTCACCACAGGCGCGGGCGAGGGCTaGTCCTCCCGGTACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YQPSGLVSKLTFQLRVTTGAGEG*SSRYRW Trigger: CCACCTGTACCGGGAGGACCAGCCCTCGCCCGCGCC...TGTGGTGACCCGCAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| CDS-3UTR CCA 90 bp | CCCATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATGGCGCGGGCGAGGGCTaGTCCTCCCGGTACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PIFQEVETGGFLALRAQDGAGEG*SSRYRW Trigger: CCACCTGTACCGGGAGGACCAGCCCTCGCCCGCGCC...ATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
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| CDS-3UTR TCA 90 bp | CCCATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCGCCGGTCTCGCTGCTaGTGTAGCACCAGGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: PIFQEVETGGFLALRAQDRRSRC*CSTRAR Trigger: GCGGGCCCTGGTGCTACATCAGCAGCGAGACCGGCG...ATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
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| CDS-3UTR TCA 90 bp | GCTTTAGCCAGCTCCCAGTCTTTCCTTGGCCCAGGCAATGTGGAAGCCCTTATTTGCCAGCCTGGCCCGTaGGGAGGGTGCTGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ALASSQSFLGPGNVEALICQPGP*GGCCPP Trigger: AGGAGGGCAGCACCCTCCTCACGGGCCAGGCTGGCA...AATAAGGGCTTCCACATTGCCTGGGCCAAGGAAAGACTGGGAGCTGGCTAAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| CDS-3UTR TCA 90 bp | CTGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTCGCCGGTCTCGCTGCTaGTGTAGCACCAGGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LVAVHNDGVFIHGLTGGVRRSRC*CSTRAR Trigger: GCGGGCCCTGGTGCTACATCAGCAGCGAGACCGGCG...AACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
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| CDS-3UTR GCA 90 bp | GTAGCTCCTCCCAACTGCAGGAGGGTGGCCTGTCCTGTACCAGTGTTTACATGGAGAGGATGGCGGTGGTaGTTGGGAAGTGGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VAPPNCRRVACPVPVFTWRGWRW*LGSGLW Trigger: CCAGAGACCACTTCCCAAGCACCACCGCCATCCTCT...CCATGTAAACACTGGTACAGGACAGGCCACCCTCCTGCAGTTGGGAGGAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| CDS-3UTR GCA 90 bp | GTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCACCAGGCAGTGACTAGAGGATGGCGGTGGTaGTTGGGAAGTGGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VETGGFLALRAQDHQAVTRGWRW*LGSGLW Trigger: CCAGAGACCACTTCCCAAGCACCACCGCCATCCTCT...AGTCACTGCCTGGTGATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
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| CDS-3UTR CCA 90 bp | GTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTTGTGAAGGCTCAAGTCCTTCCCCCTaGCTTCTGCACGGGGCACCC | + |
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Preference number: 4 (lower is better) Translates to: VHNDGVFIHGLTGGVCEGSSPSP*LLHGAP Trigger: GGGTGCCCCGTGCAGAAGCCAGGGGGAAGGACTTGA...GCCTTCACAAACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
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| 3UTR CAA 72 bp | ACAACGCAAGCCCCAGCATGTTACCAACCTTCTGGCTaGGTCTCCAAGCTCACCTTTCAGCTGCGGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TTQAPACYQPSG*VSKLTFQLRVT Trigger: GGTGACCCGCAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATGCTGGGGCTTGCGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR TCA 90 bp | CTCTATCCAGCCCCCAAAAGACAGTCTGGATATTCTGGTCTGCTGCATGAGGCTCACAGGTGGGGTTTGTaGAGGCAGACAGGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYPAPKRQSGYSGLLHEAHRWGL*RQTGAR Trigger: CCTTGCCCCTGTCTGCCTTCACAAACCCCACCTGTG...AGCCTCATGCAGCAGACCAGAATATCCAGACTGTCTTTTGGGGGCTGGATAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | TCCCAACTGCAGGAGGGTGGCCTGTCCTGTACCAGTGTTTACATGGGCACCTGCCTCTTTGTCACCTGGTaGACCAGACTTCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLQEGGLSCTSVYMGTCLFVTW*TRLLFQ Trigger: CTGGAAGAGAAGTCTGGTGCACCAGGTGACAAAGAG...GCAGGTGCCCATGTAAACACTGGTACAGGACAGGCCACCCTCCTGCAGTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGCATGTTACCAACCTTCTGGCTTGGTCTCCAAGCTCACCTTTCAGCTGGGCAAGGTGATTCGCTaGATCTCCCTCTCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: APACYQPSGLVSKLTFQLGKVIR*ISLSHA Trigger: AGCGTGTGAGAGGGAGATGCAGCGAATCACCTTGCC...CAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATGCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCACTCCTCCCGGTACAGGTaGCCGTTGTCCCAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IFQEVETGGFLALRAQDHSSRYR*PLSQKQ Trigger: CTGCTTCTGGGACAACGGCCACCTGTACCGGGAGGA...GTGATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCCAGCATGTTACCAACCTTCTGGCTTGGTCTCCAAGCTCACCTTTCAGCTGATGGCGGTGGTGCTTaGGAAGTGGTCTCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSMLPTFWLGLQAHLSADGGGA*EVVSGQ Trigger: TTGCCCAGAGACCACTTCCCAAGCACCACCGCCATC...AGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATGCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| 3UTR CAA 72 bp | ACACTGCCAAGGCCAGGAGGACACTGGGAAGCTGCTTaGCCCTTTCTGGAACTCCTTCAGGTCTTTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPRPGGHWEAA*PFLELLQVFRS Trigger: ACTGCGAAAGACCTGAAGGAGTTCCAGAAAGGGCAAAGCAGCTTCCCAGTGTCCTCCTGGCCTTGGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR TCA 90 bp | CAGGTCTTTCGCAGTGGTGCAGTGATTGTTTTGTACCAGTTAATCTTAACCCTACGCCGGTCTCGCTGCTaGTGTAGCACCAGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QVFRSGAVIVLYQLILTLRRSRC*CSTRAR Trigger: GCGGGCCCTGGTGCTACATCAGCAGCGAGACCGGCG...TAGGGTTAAGATTAACTGGTACAAAACAATCACTGCACCACTGCGAAAGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR TCA 90 bp | TCTCCGCAGGCAAATTCTGCTCCAAGGGATAGAAAAGGAGCGTTGATAGGACCCCAGACAGGGGCAAGGTaGTTCGCTGCATCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQANSAPRDRKGALIGPQTGAR*FAASPS Trigger: AGAGGGAGATGCAGCGAATCACCTTGCCCCTGTCTG...GGGTCCTATCAACGCTCCTTTTCTATCCCTTGGAGCAGAATTTGCCTGCGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | CTCCCAACTGCAGGAGGGTGGCCTGTCCTGTACCAGTGTTTACATGGGCACCTGAGATCCATAGGCTTCTaGCAGAAGCATGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTAGGWPVLYQCLHGHLRSIGF*QKHVAE Trigger: CTCAGCAACATGCTTCTGGCAGAAGCCTATGGATCT...CAGGTGCCCATGTAAACACTGGTACAGGACAGGCCACCCTCCTGCAGTTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | CTGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTAGAGGATGGCGGTGGTaGTTGGGAAGTGGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVAVHNDGVFIHGLTGGVRGWRW*LGSGLW Trigger: CCAGAGACCACTTCCCAAGCACCACCGCCATCCTCT...AACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCACAGGAGGGAACACCTGTaGCTCTTTGTCACCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFQEVETGGFLALRAQDHRREHL*LFVTWC Trigger: GCACCAGGTGACAAAGAGGCACAGGTGTTCCCTCCT...GTGATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
||
| CDS-3UTR CCA 90 bp | TGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTTGATGGCGGTGGTGCTTaGGAAGTGGTCTCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WLLCTMMVFSSTVSQVGFDGGGA*EVVSGQ Trigger: TTGCCCAGAGACCACTTCCCAAGCACCACCGCCATC...AAACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR CCA 90 bp | GGTCACCACACTCTCAAGTGTGTAATTCCCATGAATTGGCTATTTTCTTATCAGCCAGGGGTGCCAGCCTaGCCCGTGAGGAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHHTLKCVIPMNWLFSYQPGVPA*PVRRVL Trigger: CAGCACCCTCCTCACGGGCCAGGCTGGCACCCCTGG...CTGATAAGAAAATAGCCAATTCATGGGAATTACACACTTGAGAGTGTGGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGGCCAAATGCTGTCCTaGGGCTCTTGTAAGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVAVHNDGVFIHGLTGGGQMLS*GSCKCS Trigger: GCTACACTTACAAGAGCCTCAGGACAGCATTTGGCC...CCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCTCTTTGTCACCTGGTaGACCAGACTTCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIFQEVETGGFLALRAQDLFVTW*TRLLFQ Trigger: CTGGAAGAGAAGTCTGGTGCACCAGGTGACAAAGAG...ATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTTAGGAGGGAACACCTGTaGCTCTTTGTCACCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLCTMMVFSSTVSQVGFRREHL*LFVTWC Trigger: GCACCAGGTGACAAAGAGGCACAGGTGTTCCCTCCT...AAACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCAAGCAGATTCATTTCAGGTTCTTAGAAGTCAGAAGGGACTTTCATCCAGGGTGCTGCCCTCCTaGACGTCAGCAGGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CQQADSFQVLRSQKGLSSRVLPS*TSAGVW Trigger: CCAGACTCCTGCTGACGTGCAGGAGGGCAGCACCCT...GGATGAAAGTCCCTTCTGACTTCTAAGAACCTGAAATGAATCTGCTTGCTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTTGGGAAGGCGGCCAAATaGTGTCCTGAGGCTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WLLCTMMVFSSTVSQVGFGKAAK*CPEALV Trigger: TACAAGAGCCTCAGGACAGCATTTGGCCGCCTTCCC...AAACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAGTTTAGTGCAATTCTTCCCTTTCCTTACGAGATAGGAAGAGACCCTCGGTCCTCCCGGTACAGGTaGCCGTTGTCCCAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKFSAILPFPYEIGRDPRSSRYR*PLSQKQ Trigger: CTGCTTCTGGGACAACGGCCACCTGTACCGGGAGGA...CCGAGGGTCTCTTCCTATCTCGTAAGGAAAGGGAAGAATTGCACTAAACTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | AGTCTGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGCTCTTTGTCACCTGGTaGACCAGACTTCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVAVHNDGVFIHGLTGGLFVTW*TRLLFQ Trigger: CTGGAAGAGAAGTCTGGTGCACCAGGTGACAAAGAG...CCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCTCCCAGTCTTTCCTTGGCCCAGGCAATGTGGAAGCCCTTATTTGCCACAGGAGTCTGGTTGCTGTaGACAATGATGGTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPSLSLAQAMWKPLFATGVWLL*TMMVFS Trigger: TGAAAACACCATCATTGTGCACAGCAACCAGACTCC...TGTGGCAAATAAGGGCTTCCACATTGCCTGGGCCAAGGAAAGACTGGGAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | TCTCCGCAGGCAAATTCTGCTCCAAGGGATAGAAAAGGAGCGTTGATAGGACCCGCTTTCTTCTCATGTTaGTCTTTCAAGTCCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPQANSAPRDRKGALIGPAFFSC*SFKSFP Trigger: GGGGAAGGACTTGAAAGAGCAACATGAGAAGAAAGC...GGGTCCTATCAACGCTCCTTTTCTATCCCTTGGAGCAGAATTTGCCTGCGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR GCA 90 bp | TTGACCTTAACTAGGAATAACAGTATATGCCACTCAAGTTCCTGGATGACGAATAGGAGGGAACACCTGTaGCTCTTTGTCACCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTRNNSICHSSSWMTNRREHL*LFVTWC Trigger: GCACCAGGTGACAAAGAGGCACAGGTGTTCCCTCCT...ATTCGTCATCCAGGAACTTGAGTGGCATATACTGTTATTCCTAGTTAAGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGGGATTAGAGTATGTATGAAGCAGGACACCTATCTTAGTAGCAAAATTGATGGCGGTGGTGCTTaGGAAGTGGTCTCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGIRVCMKQDTYLSSKIDGGGA*EVVSGQ Trigger: TTGCCCAGAGACCACTTCCCAAGCACCACCGCCATC...AATTTTGCTACTAAGATAGGTGTCCTGCTTCATACATACTCTAATCCCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAATCTCTTTTCCTTCGGAGCATGATGACAAGGGCTCAGAAATCCCATAGATCCATAGGCTTCTaGCAGAAGCATGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNESLFLRSMMTRAQKSHRSIGF*QKHVAE Trigger: CTCAGCAACATGCTTCTGGCAGAAGCCTATGGATCT...ATGGGATTTCTGAGCCCTTGTCATCATGCTCCGAAGGAAAAGAGATTCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
||
| CDS-3UTR CCA 90 bp | TTTTTATGCTTGACCTTAACTAGGAATAACAGTATATGCCACTCAAGTTCCTGGGTGGTGCTTGGGAAGTaGTCTCTGGGCAACTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FLCLTLTRNNSICHSSSWVVLGK*SLGNSR Trigger: ACGTGAGTTGCCCAGAGACCACTTCCCAAGCACCAC...CCAGGAACTTGAGTGGCATATACTGTTATTCCTAGTTAAGGTCAAGCATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS CCA 90 bp | GCGGCCAACCAGTTGAGGCAGCGGAGACCCGGCGCGGGCGAGGGCTaGTCCTCCCGGTACAGGTGGCCGTTGTCCCAGAAGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AANQLRQRRPGAGEG*SSRYRWPLSQKQPP Trigger: TGGAGGCTGCTTCTGGGACAACGGCCACCTGTACCGGGAGGACCAGCCCTCGCCCGCGCCGGGTCTCCGCTGCCTCAACTGGTTGGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000136536.8 |
||
| CDS CCA 90 bp | CGGTGGTGCTTGGGAAGTGGTCTCCGTGGTCCCAGGGCGAGTACCTaGGCAACTCACGTCCTCGCAGGGCCGCTTTTCAGGGACGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RWCLGSGLRGPRAST*ATHVLAGPLFRDAG Trigger: ACCGGCGTCCCTGAAAAGCGGCCCTGCGAGGACGTGAGTTGCCCAGGTACTCGCCCTGGGACCACGGAGACCACTTCCCAAGCACCACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136536.8 |
||
| CDS CCA 90 bp | CAGCTCCATGGCAGAGGATGGCGGTGGTGCTTGGGAAGTGGTCTCTaGGCAACTCACGTCCTCGCAGGGCCGCTTTTCAGGGACGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLHGRGWRWCLGSGL*ATHVLAGPLFRDAG Trigger: ACCGGCGTCCCTGAAAAGCGGCCCTGCGAGGACGTGAGTTGCCCAGAGACCACTTCCCAAGCACCACCGCCATCCTCTGCCATGGAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000138907.8 |
||
| CDS-3UTR CAA 90 bp | TCTATCCAGCCCCCAAAAGACAGTCTGGATATTCTGGTCTGCTGCATGAGGCTGTGCGCGGCCAACCAGTaGAGGCAGCGGAGACCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SIQPPKDSLDILVCCMRLCAANQ*RQRRPG Trigger: GCCGGGTCTCCGCTGCCTCAACTGGTTGGCCGCGCA...CAGCCTCATGCAGCAGACCAGAATATCCAGACTGTCTTTTGGGGGCTGGATAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR CAA 90 bp | CCCATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATCGGTACAGGTGGCCGTaGTCCCAGAAGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PIFQEVETGGFLALRAQDRYRWP*SQKQPP Trigger: TGGAGGCTGCTTCTGGGACAACGGCCACCTGTACCG...ATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
||
| CDS GCA 90 bp | AGGAGGGTGCTGCCCTCCTGCACGTCAGCAGGAGTCTGGTTGCTGTaGACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRVLPSCTSAGVWLL*TMMVFSSTVSQVGF Trigger: AAACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAGACTCCTGCTGACGTGCAGGAGGGCAGCACCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR CAA 90 bp | ACTGTGCCAGTCTCTCTCCGCAGGCAAATTCTGCTCCAAGGGATAGAAAAGGAGCGGTACAGGTGGCCGTaGTCCCAGAAGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVPVSLRRQILLQGIEKERYRWP*SQKQPP Trigger: TGGAGGCTGCTTCTGGGACAACGGCCACCTGTACCG...CTCCTTTTCTATCCCTTGGAGCAGAATTTGCCTGCGGAGAGAGACTGGCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS TCA 90 bp | GGGCACCCGCTGAGCTTGGAATTGAGGGCAGCTAGATCAAGCTCCTaGAGGTCTGGAAACTGTCCTAAGATGGGAAGGCGGCCAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHPLSLELRAARSSS*RSGNCPKMGRRPNA Trigger: AGCATTTGGCCGCCTTCCCATCTTAGGACAGTTTCCAGACCTTCAGGAGCTTGATCTAGCTGCCCTCAATTCCAAGCTCAGCGGGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTTGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTGGGGTTGGGCACCCGCTGAGCTaGGAATTGAGGGCAGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVAVHNDGVFIHGLTGGVGHPLS*ELRAAR Trigger: TCTAGCTGCCCTCAATTCCAAGCTCAGCGGGTGCCC...AACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
||
| CDS-3UTR CAA 90 bp | GCATGTTACCAACCTTCTGGCTTGGTCTCCAAGCTCACCTTTCAGCTGCGGGTCTCAGCAGGAGTCTGGTaGCTGTGCACAATGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ACYQPSGLVSKLTFQLRVSAGVW*LCTMMV Trigger: CACCATCATTGTGCACAGCAACCAGACTCCTGCTGA...GACCCGCAGCTGAAAGGTGAGCTTGGAGACCAAGCCAGAAGGTTGGTAACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR CAA 90 bp | CCCATTTTCCAAGAGGTTGAGACAGGAGGATTCCTTGCCCTGAGGGCCCAAGATTCTGCCAGAAGCATGTaGCTGAGAAGAAATGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PIFQEVETGGFLALRAQDSARSM*LRRNVC Trigger: ACACACATTTCTTCTCAGCAACATGCTTCTGGCAGA...ATCTTGGGCCCTCAGGGCAAGGAATCCTCCTGTCTCAACCTCTTGGAAAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093399.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGCTGCGGGTCACCACACTCTCAAGTGTGTAATTCCCATGAATTGGCTATTTCTGCCAGAAGCATGTaGCTGAGAAGAAATGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSCGSPHSQVCNSHELAISARSM*LRRNVC Trigger: ACACACATTTCTTCTCAGCAACATGCTTCTGGCAGA...AATAGCCAATTCATGGGAATTACACACTTGAGAGTGTGGTGACCCGCAGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS-3UTR CAA 90 bp | CAGGTCTTTCGCAGTGGTGCAGTGATTGTTTTGTACCAGTTAATCTTAACCCTACGCTTTCTTCTCATGTaGCTCTTTCAAGTCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QVFRSGAVIVLYQLILTLRFLLM*LFQVLP Trigger: GGGAAGGACTTGAAAGAGCAACATGAGAAGAAAGCG...TAGGGTTAAGATTAACTGGTACAAAACAATCACTGCACCACTGCGAAAGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS CAA 90 bp | CTGGGCTCGGTGAGCGACTCGCGGCTGCCTTGCGCGGCCAACCAGTaGAGGCAGCGGAGACCCGGCGCGGGCGAGGGCTGGTCCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGSVSDSRLPCAANQ*RQRRPGAGEGWSSR Trigger: CCGGGAGGACCAGCCCTCGCCCGCGCCGGGTCTCCGCTGCCTCAACTGGTTGGCCGCGCAAGGCAGCCGCGAGTCGCTCACCGAGCCCAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000136536.8 |
||
| CDS CCA 72 bp | CAGTTGAGGCAGCGGAGACCCGGCGCGGGCGAGGGCTaGTCCTCCCGGTACAGGTGGCCGTTGTCCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QLRQRRPGAGEG*SSRYRWPLSQK Trigger: CTTCTGGGACAACGGCCACCTGTACCGGGAGGACCAGCCCTCGCCCGCGCCGGGTCTCCGCTGCCTCAACTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000136536.8 |
||
| CDS GCA 72 bp | GTGCCAGCCTGGCCCGTGAGGAGGGTGCTGCCCTCCTaGACGTCAGCAGGAGTCTGGTTGCTGTGCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: VPAWPVRRVLPS*TSAGVWLLCTM Trigger: CATTGTGCACAGCAACCAGACTCCTGCTGACGTGCAGGAGGGCAGCACCCTCCTCACGGGCCAGGCTGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
||
| CDS CCA 72 bp | GCTCCATGGCAGAGGATGGCGGTGGTGCTTGGGAAGTaGTCTCTGGGCAACTCACGTCCTCGCAGGGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: APWQRMAVVLGK*SLGNSRPRRAA Trigger: AGCGGCCCTGCGAGGACGTGAGTTGCCCAGAGACCACTTCCCAAGCACCACCGCCATCCTCTGCCATGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000138907.8 |
||
| CDS CCA 72 bp | GGCAGAGGATGGCGGTGGTGCTTGGGAAGTGGTCTCTaGGCAACTCACGTCCTCGCAGGGCCGCTTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGWRWCLGSGL*ATHVLAGPLFR Trigger: CCTGAAAAGCGGCCCTGCGAGGACGTGAGTTGCCCAGAGACCACTTCCCAAGCACCACCGCCATCCTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000138907.8 |
||
| CDS CAA 90 bp | CTCCTGGCTGGTAGGGCGTTAGCAGGAGGGAACACCTGTGCCTCTTaGTCACCTGGTGCACCAGACTTCTCTTCCAGCTCCATGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLAGRALAGGNTCAS*SPGAPDFSSSSMAE Trigger: CTCTGCCATGGAGCTGGAAGAGAAGTCTGGTGCACCAGGTGACAAAGAGGCACAGGTGTTCCCTCCTGCTAACGCCCTACCAGCCAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000136474.2 ENSMUST00000136536.8 ENSMUST00000138907.8 |
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| CDS CAA 90 bp | CCCGTGAGGAGGGTGCTGCCCTCCTGCACGTCAGCAGGAGTCTGGTaGCTGTGCACAATGATGGTGTTTTCATCCACGGTCTCACAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PVRRVLPSCTSAGVW*LCTMMVFSSTVSQV Trigger: CACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAGACTCCTGCTGACGTGCAGGAGGGCAGCACCCTCCTCACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045153.11 |
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| CDS CCA 72 bp | TGCACCAGACTTCTCTTCCAGCTCCATGGCAGAGGATaGCGGTGGTGCTTGGGAAGTGGTCTCTGGGCAACT | + |
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Preference number: 6 (lower is better) Translates to: CTRLLFQLHGRG*RWCLGSGLWAT Trigger: AGTTGCCCAGAGACCACTTCCCAAGCACCACCGCCATCCTCTGCCATGGAGCTGGAAGAGAAGTCTGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000138907.8 |
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| CDS GCA 72 bp | AGCAGGAGGGAACACCTGTGCCTCTTTGTCACCTGGTaGACCAGACTTCTCTTCCAGCTCCATGGCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SRREHLCLFVTW*TRLLFQLHGRG Trigger: TCCTCTGCCATGGAGCTGGAAGAGAAGTCTGGTGCACCAGGTGACAAAGAGGCACAGGTGTTCCCTCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000136474.2 ENSMUST00000136536.8 ENSMUST00000138907.8 |
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| CDS TCA 72 bp | CCTGCACGTCAGCAGGAGTCTGGTTGCTGTGCACAATaGTGGTGTTTTCATCCACGGTCTCACAGGTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PARQQESGCCAQ*WCFHPRSHRWG Trigger: ACCCCACCTGTGAGACCGTGGATGAAAACACCATCATTGTGCACAGCAACCAGACTCCTGCTGACGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045153.11 ENSMUST00000136474.2 ENSMUST00000136536.8 |
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| CDS CCA 72 bp | GTTAGCAGGAGGGAACACCTGTGCCTCTTTGTCACCTaGTGCACCAGACTTCTCTTCCAGCTCCATGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VSRREHLCLFVT*CTRLLFQLHGR Trigger: TCTGCCATGGAGCTGGAAGAGAAGTCTGGTGCACCAGGTGACAAAGAGGCACAGGTGTTCCCTCCTGCTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045153.11 ENSMUST00000093399.11 ENSMUST00000136474.2 ENSMUST00000136536.8 ENSMUST00000138907.8 |
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| CDS TCA 72 bp | CTGAGCTTGGAATTGAGGGCAGCTAGATCAAGCTCCTaGAGGTCTGGAAACTGTCCTAAGATGGGAAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: LSLELRAARSSS*RSGNCPKMGRR Trigger: CCGCCTTCCCATCTTAGGACAGTTTCCAGACCTTCAGGAGCTTGATCTAGCTGCCCTCAATTCCAAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138907.8 |
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