Pregenerated sensors for PIH1D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003423Ensembl transcript IDs: ENSMUST00000085375.13, ENSMUST00000107811.4, ENSMUST00000209847.2, ENSMUST00000209954.2, ENSMUST00000210139.2, ENSMUST00000211414.2, ENSMUST00000211709.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTGGGCCGTTCTGGGCCATaGCAGGTTCCCAGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HLEKTPTSSPHLENQGTLGRSGP*QVPSEP Trigger: TGGCTCACTGGGAACCTGTCATGGCCCAGAACGGCC...CAGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR GCA 90 bp | CACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTGTCCTCCTCCAGCATCTaGAGCAGCTCGTCCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: HLEKTPTSSPHLENQGTLSSSSI*SSSSSV Trigger: GACTGAGGACGAGCTGCTGCAGATGCTGGAGGAGGA...CAGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | CACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTGTCTGGCCTGGCTGTCTaGGCTTGCTGGAGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: HLEKTPTSSPHLENQGTLSGLAV*ACWSSL Trigger: CAAAGAGCTCCAGCAAGCCCAGACAGCCAGGCCAGA...CAGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR GCA 90 bp | CTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGCATCCAGCTCCGCGTaGGGCTCTCCCAGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: LETCLFHLEKTPTSSPHLASSSA*GSPRLM Trigger: CATGAGCCTGGGAGAGCCGCACGCGGAGCTGGATGC...CAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | CACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTGGCTGTCTGGGCTTGCTaGAGCTCTTTGGAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLEKTPTSSPHLENQGTLAVWAC*SSLEAF Trigger: GAAGGCTTCCAAAGAGCTCCAGCAAGCCCAGACAGC...CAGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | TCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTTCTGGCCTGGCTGTCTaGGCTTGCTGGAGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLREDTNIFSTSGKPGHSSGLAV*ACWSSL Trigger: CAAAGAGCTCCAGCAAGCCCAGACAGCCAGGCCAGA...AGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR GCA 90 bp | ACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGCATCCAGCTCCGCGTaGGGCTCTCCCAGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TGNLFISLREDTNIFSTSASSSA*GSPRLM Trigger: CATGAGCCTGGGAGAGCCGCACGCGGAGCTGGATGC...AGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | CACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTGCTTGCTGGAGCTCTTTaGAAGCCTTCAGCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLEKTPTSSPHLENQGTLLAGAL*KPSAAA Trigger: AGCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAG...CAGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | ATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACATTCGGAAGCCAGCCTaGTCCTCCTCCAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISLREDTNIFSTSGKPGHIRKPA*SSSSIC Trigger: GCAGATGCTGGAGGAGGACCAGGCTGGCTTCCGAAT...GTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | CACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTGTGTTCTGCTGTGAGATaGAGCCCAGGAAAGACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLEKTPTSSPHLENQGTLCSAVR*SPGKTG Trigger: ACCGGTCTTTCCTGGGCTCCATCTCACAGCAGAACA...CAGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | ATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTTCAGCAGCAGCTCCTaGAACCGCACCGTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ISLREDTNIFSTSGKPGHFSSSS*NRTVSS Trigger: TGAAGAGACGGTGCGGTTTCAGGAGCTGCTGCTGAA...GTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | GAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCCTCCCTGGCGATGGTaGCCACCAGTTCCCGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELETCLFHLEKTPTSSPHPPWRW*PPVPAR Trigger: TCTTGCGGGAACTGGTGGTCACCATCGCCAGGGAGG...ATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | GAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAACCTCCCTGGCGATGGTaGCCACCAGTTCCCGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: ETCLFHLEKTPTSSPHLEPPWRW*PPVPAR Trigger: TCTTGCGGGAACTGGTGGTCACCATCGCCAGGGAGG...TTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | ACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGCCGTTCTGGGCCATaGCAGGTTCCCAGTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNLFISLREDTNIFSTSGRSGP*QVPSEP Trigger: TGGCTCACTGGGAACCTGTCATGGCCCAGAACGGCC...AGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | TGGGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTTTCCCAGTGAGCCACTaGCATCCAGGGTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGELETCLFHLEKTPTSSFPVSH*HPGSPA Trigger: AGCTGGGGACCCTGGATGCCAGTGGCTCACTGGGAA...AGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | TTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTACGGATGTTCTGCTGTaGGATGGAGCCCAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FHLEKTPTSSPHLENQGTTDVLL*DGAQER Trigger: TCTTTCCTGGGCTCCATCTCACAGCAGAACATCCGT...AGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR GCA 90 bp | GGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCTCAGTTGCTTCCTCCTaGGGTGAAAAGCAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRTGNLFISLREDTNIFSSVASS*GEKQPC Trigger: GCAGGGCTGCTTTTCACCGCAGGAGGAAGCAACTGA...GGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | TTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTTGCTGGAGCTCTTTaGAAGCCTTCAGCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHLEKTPTSSPHLENQGTLAGAL*KPSAAA Trigger: AGCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAG...AGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | GGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCGCTGTCTGGGCTTGCTaGAGCTCTTTGGAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTGNLFISLREDTNIFSAVWAC*SSLEAF Trigger: GAAGGCTTCCAAAGAGCTCCAGCAAGCCCAGACAGC...GGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | GGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGATCTGGCCTGGCTGTCTaGGCTTGCTGGAGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNLFISLREDTNIFSTSGSGLAV*ACWSSL Trigger: CAAAGAGCTCCAGCAAGCCCAGACAGCCAGGCCAGA...TCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | GGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAATTCGGAAGCCAGCCTaGTCCTCCTCCAGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GNLFISLREDTNIFSTSGIRKPA*SSSSIC Trigger: GCAGATGCTGGAGGAGGACCAGGCTGGCTTCCGAAT...TCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | CTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGATTCGGAAGCCAGCCTaGTCCTCCTCCAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LETCLFHLEKTPTSSPHLIRKPA*SSSSIC Trigger: GCAGATGCTGGAGGAGGACCAGGCTGGCTTCCGAAT...CAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | TTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTTGTTCTGCTGTGAGATaGAGCCCAGGAAAGACCGGT | + |
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Preference number: 4 (lower is better) Translates to: FHLEKTPTSSPHLENQGTCSAVR*SPGKTG Trigger: ACCGGTCTTTCCTGGGCTCCATCTCACAGCAGAACA...AGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | AGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATTCCCAGTGAGCCACTaGCATCCAGGGTCCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RTGNLFISLREDTNIFSTFPVSH*HPGSPA Trigger: AGCTGGGGACCCTGGATGCCAGTGGCTCACTGGGAA...TGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGTTCAGCAGCAGCTCCTaGAACCGCACCGTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LETCLFHLEKTPTSSPHLFSSSS*NRTVSS Trigger: TGAAGAGACGGTGCGGTTTCAGGAGCTGCTGCTGAA...CAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | GGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAATCCGAGGTCGCTGCTaGGAACGGATGTTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GNLFISLREDTNIFSTSGIRGRC*ERMFCC Trigger: ACAGCAGAACATCCGTTCTCAGCAGCGACCTCGGAT...TCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGACAGTGGCATCCAGATaGTACAGTTGCTGGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LETCLFHLEKTPTSSPHLTVASR*YSCWGP Trigger: AGGCCCCCAGCAACTGTATCATCTGGATGCCACTGT...CAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR GCA 90 bp | AGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCCTCCTCCAGCATCTaGAGCAGCTCGTCCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTGNLFISLREDTNIFSTSSSSI*SSSSSV Trigger: GACTGAGGACGAGCTGCTGCAGATGCTGGAGGAGGA...TGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR GCA 90 bp | ACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTTCCTCCTCCAGCATCTaGAGCAGCTCGTCCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: TGNLFISLREDTNIFSTSSSSSI*SSSSSV Trigger: GACTGAGGACGAGCTGCTGCAGATGCTGGAGGAGGA...AGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR GCA 90 bp | CTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGTCAGTTGCTTCCTCCTaGGGTGAAAAGCAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LETCLFHLEKTPTSSPHLSVASS*GEKQPC Trigger: GCAGGGCTGCTTTTCACCGCAGGAGGAAGCAACTGA...CAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | GGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCCTTGCTGGAGCTCTTTaGAAGCCTTCAGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GRTGNLFISLREDTNIFSLAGAL*KPSAAA Trigger: AGCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAG...GGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | TGGGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTGATCTGTGTAGAGTCTaGCCTGGCTGTCTGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: WGELETCLFHLEKTPTSSDLCRV*PGCLGL Trigger: CAAGCCCAGACAGCCAGGCCAGACTCTACACAGATC...AGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | CACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTGTTCCTTCCGATGAGTTaGTCTTCACACAGAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: HLEKTPTSSPHLENQGTLFLPMS*SSHRNQ Trigger: CTGGTTTCTGTGTGAAGACCAACTCATCGGAAGGAA...CAGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | TCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTTCCTCAGGGGAACAGTaGCATCCAGATGATACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SLREDTNIFSTSGKPGHSSSGEQ*HPDDTV Trigger: AACTGTATCATCTGGATGCCACTGTTCCCCTGAGGA...AGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | AGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACAATCCGAGGTCGCTGCTaGGAACGGATGTTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RTGNLFISLREDTNIFSTIRGRC*ERMFCC Trigger: ACAGCAGAACATCCGTTCTCAGCAGCGACCTCGGAT...TGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | GAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAATCCGAGGTCGCTGCTaGGAACGGATGTTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ETCLFHLEKTPTSSPHLEIRGRC*ERMFCC Trigger: ACAGCAGAACATCCGTTCTCAGCAGCGACCTCGGAT...TTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | AGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACAACAGTGGCATCCAGATaGTACAGTTGCTGGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RTGNLFISLREDTNIFSTTVASR*YSCWGP Trigger: AGGCCCCCAGCAACTGTATCATCTGGATGCCACTGT...TGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | ACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGATCTGTGTAGAGTCTaGCCTGGCTGTCTGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TGNLFISLREDTNIFSTSDLCRV*PGCLGL Trigger: CAAGCCCAGACAGCCAGGCCAGACTCTACACAGATC...AGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | GAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATGATCTGTGTAGAGTCTaGCCTGGCTGTCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELETCLFHLEKTPTSSPHDLCRV*PGCLGL Trigger: CAAGCCCAGACAGCCAGGCCAGACTCTACACAGATC...ATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | TCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTCTTTCCTTCCGATGAGTTaGTCTTCACACAGAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLREDTNIFSTSGKPGHSFLPMS*SSHRNQ Trigger: CTGGTTTCTGTGTGAAGACCAACTCATCGGAAGGAA...AGAGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR CCA 90 bp | GGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGATGTTCTGCTGTGAGATaGAGCCCAGGAAAGACCGGT | + |
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Preference number: 4 (lower is better) Translates to: GNLFISLREDTNIFSTSGCSAVR*SPGKTG Trigger: ACCGGTCTTTCCTGGGCTCCATCTCACAGCAGAACA...TCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS-3UTR TCA 90 bp | AACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAATTCAGCAGCAGCTCCTaGAACCGCACCGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLFISLREDTNIFSTSGKFSSSS*NRTVSS Trigger: TGAAGAGACGGTGCGGTTTCAGGAGCTGCTGCTGAA...TTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR TCA 90 bp | GAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAACGGATGTTCTGCTGTaGGATGGAGCCCAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETCLFHLEKTPTSSPHLETDVLL*DGAQER Trigger: TCTTTCCTGGGCTCCATCTCACAGCAGAACATCCGT...TTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR TCA 90 bp | AACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAAACAGTGGCATCCAGATaGTACAGTTGCTGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFISLREDTNIFSTSGKTVASR*YSCWGP Trigger: AGGCCCCCAGCAACTGTATCATCTGGATGCCACTGT...TTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR GCA 90 bp | GGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAAAGCAGCCCTGCTTaGCTCACTGTTGATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNLFISLREDTNIFSTSGKSSPA*LTVDPQ Trigger: CTGAGGATCAACAGTGAGGCAAGCAGGGCTGCTTTT...TCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTTCCTTCCGATGAGTTaGTCTTCACACAGAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLREDTNIFSTSGKPGHFLPMS*SSHRNQ Trigger: CTGGTTTCTGTGTGAAGACCAACTCATCGGAAGGAA...GTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACCGGTACTTCAACATaGGCCATTCAGGATTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRTGNLFISLREDTNIFSTGTST*AIQDLA Trigger: AGCTAAATCCTGAATGGCGCATGTTGAAGTACCGGT...GGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR GCA 90 bp | GAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATAAAAGCAGCCCTGCTTaGCTCACTGTTGATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELETCLFHLEKTPTSSPHKSSPA*LTVDPQ Trigger: CTGAGGATCAACAGTGAGGCAAGCAGGGCTGCTTTT...ATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGTCCTCAGGGGAACAGTaGCATCCAGATGATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LETCLFHLEKTPTSSPHLSSGEQ*HPDDTV Trigger: AACTGTATCATCTGGATGCCACTGTTCCCCTGAGGA...CAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTACCGGTACTTCAACATaGGCCATTCAGGATTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGELETCLFHLEKTPTSSTGTST*AIQDLA Trigger: AGCTAAATCCTGAATGGCGCATGTTGAAGTACCGGT...AGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CCA 90 bp | GAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAATCCTCAGGGGAACAGTaGCATCCAGATGATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETCLFHLEKTPTSSPHLESSGEQ*HPDDTV Trigger: AACTGTATCATCTGGATGCCACTGTTCCCCTGAGGA...TTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTACCGGTACTTCAACATaGGCCATTCAGGATTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGNLFISLREDTNIFSTSTGTST*AIQDLA Trigger: AGCTAAATCCTGAATGGCGCATGTTGAAGTACCGGT...AGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS GCA 90 bp | GAGCCACGCATGCGCACTGGTGAGGGCTTGCCCCGCGGCCGCTGCTaGCTCCGAGTCCTCTCGGCCGCTTGGGGCGCGCGGGCTCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: EPRMRTGEGLPRGRC*LRVLSAAWGARAPV Trigger: GACGGGAGCCCGCGCGCCCCAAGCGGCCGAGAGGACTCGGAGGCAGCAGCGGCCGCGGGGCAAGCCCTCACCAGTGCGCATGCGTGGCTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211709.2 |
||
| CDS GCA 90 bp | AGGCTCATGGGGATTCGGAAGCCAGCCTGGTCCTCCTCCAGCATCTaGAGCAGCTCGTCCTCAGTCACGTCGGCCGGGGGAGGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLMGIRKPAWSSSSI*SSSSSVTSAGGGME Trigger: CTCCATCCCTCCCCCGGCCGACGTGACTGAGGACGAGCTGCTGCAGATGCTGGAGGAGGACCAGGCTGGCTTCCGAATCCCCATGAGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209954.2 ENSMUST00000210139.2 ENSMUST00000211709.2 |
||
| CDS GCA 90 bp | GTTGCTATTGACAGCGACGTCATAGGCAGTACAGCCCTGGCCTTTTaGATCCAGCTCCGCGTGCGGCTCTCCCAGGCTCATGGGGATTCG | + |
|
Preference number: 5 (lower is better) Translates to: VAIDSDVIGSTALAF*IQLRVRLSQAHGDS Trigger: CGAATCCCCATGAGCCTGGGAGAGCCGCACGCGGAGCTGGATGCAAAAGGCCAGGGCTGTACTGCCTATGACGTCGCTGTCAATAGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209954.2 ENSMUST00000210139.2 |
||
| CDS GCA 90 bp | TTGCTGGGGGCCTCCTATCACCAGGCGGTTCTCTCCTATTTCCAGTaGCAGCCCTTGTGCGCCGTCCAGTTTAGGAAGGTCAACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGASYHQAVLSYFQ*QPLCAVQFRKVNFS Trigger: GCTGAAGTTGACCTTCCTAAACTGGACGGCGCACAAGGGCTGGCACTGGAAATAGGAGAGAACCGCCTGGTGATAGGAGGCCCCCAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS TCA 90 bp | CAGCTCCTGGATCCGAGGTCGCTGCTGAGAACGGATGTTCTGCTGTaGGATGGAGCCCAGGAAAGACCGGTACTTCAACATGCGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLDPRSLLRTDVLL*DGAQERPVLQHAPF Trigger: GAATGGCGCATGTTGAAGTACCGGTCTTTCCTGGGCTCCATCTCACAGCAGAACATCCGTTCTCAGCAGCGACCTCGGATCCAGGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS TCA 90 bp | CTGCTTGCCTCACTGTTGATCCTCAGGGGAACAGTGGCATCCAGATaGTACAGTTGCTGGGGGCCTCCTATCACCAGGCGGTTCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLASLLILRGTVASR*YSCWGPPITRRFSP Trigger: AGGAGAGAACCGCCTGGTGATAGGAGGCCCCCAGCAACTGTATCATCTGGATGCCACTGTTCCCCTGAGGATCAACAGTGAGGCAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS TCA 90 bp | GTTGCTTCCTCCTGCGGTGAAAAGCAGCCCTGCTTGCCTCACTGTTaGTCCTCAGGGGAACAGTGGCATCCAGATGATACAGTTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VASSCGEKQPCLPHC*SSGEQWHPDDTVAG Trigger: CCCAGCAACTGTATCATCTGGATGCCACTGTTCCCCTGAGGATCAACAGTGAGGCAAGCAGGGCTGCTTTTCACCGCAGGAGGAAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS CCA 90 bp | GGTCTTCACACAGAAACCAGGCTTTGGCTGGATCTGTGTAGAGTCTaGCCTGGCTGTCTGGGCTTGCTGGAGCTCTTTGGAAGCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLHTETRLWLDLCRV*PGCLGLLELFGSLQ Trigger: CTGAAGGCTTCCAAAGAGCTCCAGCAAGCCCAGACAGCCAGGCCAGACTCTACACAGATCCAGCCAAAGCCTGGTTTCTGTGTGAAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209847.2 ENSMUST00000209954.2 ENSMUST00000210139.2 ENSMUST00000211709.2 |
||
| CDS CCA 90 bp | CCTGGATCCGAGGTCGCTGCTGAGAACGGATGTTCTGCTGTGAGATaGAGCCCAGGAAAGACCGGTACTTCAACATGCGCCATTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGSEVAAENGCSAVR*SPGKTGTSTCAIQD Trigger: ATCCTGAATGGCGCATGTTGAAGTACCGGTCTTTCCTGGGCTCCATCTCACAGCAGAACATCCGTTCTCAGCAGCGACCTCGGATCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS TCA 90 bp | TTAGCTGTAGGCCATACTTGTCCTCAAGGCCCTCCCTGGCGATGGTaGCCACCAGTTCCCGCAAGAAATCACTGTTCTGCATCCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LAVGHTCPQGPPWRW*PPVPARNHCSASSG Trigger: ACCTGAGGATGCAGAACAGTGATTTCTTGCGGGAACTGGTGGTCACCATCGCCAGGGAGGGCCTTGAGGACAAGTATGGCCTACAGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS GCA 90 bp | GGACACCATCAGTTGCTTCCTCCTGCGGTGAAAAGCAGCCCTGCTTaGCTCACTGTTGATCCTCAGGGGAACAGTGGCATCCAGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: GHHQLLPPAVKSSPA*LTVDPQGNSGIQMI Trigger: TATCATCTGGATGCCACTGTTCCCCTGAGGATCAACAGTGAGGCAAGCAGGGCTGCTTTTCACCGCAGGAGGAAGCAACTGATGGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTACAGCCCTGGCCTTTaGCATCCAGCTCCGCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISLREDTNIFSTSGKPGHYSPGL*HPAPRA Trigger: CGCACGCGGAGCTGGATGCAAAAGGCCAGGGCTGTA...GTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS GCA 90 bp | TGTTCTGCTGTGAGATGGAGCCCAGGAAAGACCGGTACTTCAACATaGGCCATTCAGGATTTAGCTGTAGGCCATACTTGTCCTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSAVRWSPGKTGTST*AIQDLAVGHTCPQG Trigger: GCCTTGAGGACAAGTATGGCCTACAGCTAAATCCTGAATGGCGCATGTTGAAGTACCGGTCTTTCCTGGGCTCCATCTCACAGCAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACGCTTGCTGGAGCTCTTaGGAAGCCTTCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISLREDTNIFSTSGKPGHACWSS*EAFSSS Trigger: GCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAGC...GTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTTACAGCCCTGGCCTTTaGCATCCAGCTCCGCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: WGELETCLFHLEKTPTSSYSPGL*HPAPRA Trigger: CGCACGCGGAGCTGGATGCAAAAGGCCAGGGCTGTA...AGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | TTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAAACCAGGGCACTAGCTGTAGGCCATACTaGTCCTCAAGGCCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHLEKTPTSSPHLENQGTSCRPY*SSRPSL Trigger: CAGGGAGGGCCTTGAGGACAAGTATGGCCTACAGCT...AGTGCCCTGGTTTTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGTTCCAGTGCCAGCCCTaGTGCGCCGTCCAGTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LETCLFHLEKTPTSSPHLFQCQP*CAVQFR Trigger: CCTAAACTGGACGGCGCACAAGGGCTGGCACTGGAA...CAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCATTCCAGTGCCAGCCCTaGTGCGCCGTCCAGTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GELETCLFHLEKTPTSSPFQCQP*CAVQFR Trigger: CCTAAACTGGACGGCGCACAAGGGCTGGCACTGGAA...TGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | GGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAGCTGTAGGCCATACTaGTCCTCAAGGCCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GNLFISLREDTNIFSTSGSCRPY*SSRPSL Trigger: CAGGGAGGGCCTTGAGGACAAGTATGGCCTACAGCT...TCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTTTCCAGTGCCAGCCCTaGTGCGCCGTCCAGTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGNLFISLREDTNIFSTSFQCQP*CAVQFR Trigger: CCTAAACTGGACGGCGCACAAGGGCTGGCACTGGAA...AGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGCTTGCTGGAGCTCTTaGGAAGCCTTCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGNLFISLREDTNIFSTSACWSS*EAFSSS Trigger: GCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAGC...AGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | GAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCTGGAAGCTTGCTGGAGCTCTTaGGAAGCCTTCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETCLFHLEKTPTSSPHLEACWSS*EAFSSS Trigger: GCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAGC...TTCCAGATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | AGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACAAGCTGTAGGCCATACTaGTCCTCAAGGCCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTGNLFISLREDTNIFSTSCRPY*SSRPSL Trigger: CAGGGAGGGCCTTGAGGACAAGTATGGCCTACAGCT...TGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCCATGGACACCATCAGTaGCTTCCTCCTGCGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GRTGNLFISLREDTNIFSHGHHQ*LPPAVK Trigger: TTTCACCGCAGGAGGAAGCAACTGATGGTGTCCATG...GGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS-3UTR CAA 90 bp | GAACTGGAAACCTGTTTATTTCACTTAGAGAAGACACCAACATCTTCTCCACATCATGGACACCATCAGTaGCTTCCTCCTGCGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ELETCLFHLEKTPTSSPHHGHHQ*LPPAVK Trigger: TTTCACCGCAGGAGGAAGCAACTGATGGTGTCCATG...ATGTGGAGAAGATGTTGGTGTCTTCTCTAAGTGAAATAAACAGGTTTCCAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
||
| CDS GCA 72 bp | ATGCGCACTGGTGAGGGCTTGCCCCGCGGCCGCTGCTaGCTCCGAGTCCTCTCGGCCGCTTGGGGCGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: MRTGEGLPRGRC*LRVLSAAWGAR Trigger: CCGCGCGCCCCAAGCGGCCGAGAGGACTCGGAGGCAGCAGCGGCCGCGGGGCAAGCCCTCACCAGTGCGCAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211709.2 |
||
| CDS CAA 90 bp | GTGAGACTCGGTGCCGGAGAGCCACGCATGCGCACTGGTGAGGGCTaGCCCCGCGGCCGCTGCTGCCTCCGAGTCCTCTCGGCCGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VRLGAGEPRMRTGEG*PRGRCCLRVLSAAW Trigger: CCAAGCGGCCGAGAGGACTCGGAGGCAGCAGCGGCCGCGGGGCAAGCCCTCACCAGTGCGCATGCGTGGCTCTCCGGCACCGAGTCTCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211709.2 |
||
| CDS TCA 72 bp | GAGACTCGGTGCCGGAGAGCCACGCATGCGCACTGGTaGGGGCTTGCCCCGCGGCCGCTGCTGCCTCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ETRCRRATHAHW*GLAPRPLLPPS Trigger: ACTCGGAGGCAGCAGCGGCCGCGGGGCAAGCCCTCACCAGTGCGCATGCGTGGCTCTCCGGCACCGAGTCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211709.2 |
||
| CDS GCA 72 bp | GGGATTCGGAAGCCAGCCTGGTCCTCCTCCAGCATCTaGAGCAGCTCGTCCTCAGTCACGTCGGCCGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GIRKPAWSSSSI*SSSSSVTSAGG Trigger: TCCCCCGGCCGACGTGACTGAGGACGAGCTGCTGCAGATGCTGGAGGAGGACCAGGCTGGCTTCCGAATCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209954.2 ENSMUST00000210139.2 ENSMUST00000211709.2 |
||
| CDS GCA 72 bp | GCAGTACAGCCCTGGCCTTTTGCATCCAGCTCCGCGTaGGGCTCTCCCAGGCTCATGGGGATTCGGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AVQPWPFASSSA*GSPRLMGIRKP Trigger: TGGCTTCCGAATCCCCATGAGCCTGGGAGAGCCGCACGCGGAGCTGGATGCAAAAGGCCAGGGCTGTACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209954.2 ENSMUST00000210139.2 |
||
| CDS CAA 90 bp | AGGCTTTGGCTGGATCTGTGTAGAGTCTGGCCTGGCTGTCTGGGCTaGCTGGAGCTCTTTGGAAGCCTTCAGCAGCAGCTCCTGAAACCG | + |
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Preference number: 6 (lower is better) Translates to: RLWLDLCRVWPGCLG*LELFGSLQQQLLKP Trigger: CGGTTTCAGGAGCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAGCCCAGACAGCCAGGCCAGACTCTACACAGATCCAGCCAAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209847.2 ENSMUST00000209954.2 ENSMUST00000210139.2 ENSMUST00000211709.2 |
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| CDS GCA 72 bp | GCCTCCTATCACCAGGCGGTTCTCTCCTATTTCCAGTaGCAGCCCTTGTGCGCCGTCCAGTTTAGGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: ASYHQAVLSYFQ*QPLCAVQFRKV Trigger: GACCTTCCTAAACTGGACGGCGCACAAGGGCTGGCACTGGAAATAGGAGAGAACCGCCTGGTGATAGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS CAA 72 bp | CTGGATCTGTGTAGAGTCTGGCCTGGCTGTCTGGGCTaGCTGGAGCTCTTTGGAAGCCTTCAGCAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LDLCRVWPGCLG*LELFGSLQQQL Trigger: GAGCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCAAGCCCAGACAGCCAGGCCAGACTCTACACAGATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209847.2 ENSMUST00000209954.2 ENSMUST00000210139.2 ENSMUST00000211414.2 ENSMUST00000211709.2 |
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| CDS CAA 90 bp | CGGTACTTCAACATGCGCCATTCAGGATTTAGCTGTAGGCCATACTaGTCCTCAAGGCCCTCCCTGGCGATGGTGACCACCAGTTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: RYFNMRHSGFSCRPY*SSRPSLAMVTTSSR Trigger: GCGGGAACTGGTGGTCACCATCGCCAGGGAGGGCCTTGAGGACAAGTATGGCCTACAGCTAAATCCTGAATGGCGCATGTTGAAGTACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS TCA 72 bp | TGCTGGAGCTCTTTGGAAGCCTTCAGCAGCAGCTCCTaGAACCGCACCGTCTCTTCACCCATCGACTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CWSSLEAFSSSS*NRTVSSPIDSV Trigger: CACAGAGTCGATGGGTGAAGAGACGGTGCGGTTTCAGGAGCTGCTGCTGAAGGCTTCCAAAGAGCTCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209847.2 ENSMUST00000209954.2 ENSMUST00000210139.2 ENSMUST00000211414.2 ENSMUST00000211709.2 |
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| CDS TCA 72 bp | GGCCATACTTGTCCTCAAGGCCCTCCCTGGCGATGGTaGCCACCAGTTCCCGCAAGAAATCACTGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GHTCPQGPPWRW*PPVPARNHCSA Trigger: TGCAGAACAGTGATTTCTTGCGGGAACTGGTGGTCACCATCGCCAGGGAGGGCCTTGAGGACAAGTATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS TCA 72 bp | TCACTGTTGATCCTCAGGGGAACAGTGGCATCCAGATaGTACAGTTGCTGGGGGCCTCCTATCACCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SLLILRGTVASR*YSCWGPPITRR Trigger: CCGCCTGGTGATAGGAGGCCCCCAGCAACTGTATCATCTGGATGCCACTGTTCCCCTGAGGATCAACAGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS TCA 72 bp | AGGGGCATGGACACCATCAGTTGCTTCCTCCTGCGGTaGAAAGCAGCCCTGCTTGCCTCACTGTTGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGMDTISCFLLR*KAALLASLLIL Trigger: GAGGATCAACAGTGAGGCAAGCAGGGCTGCTTTTCACCGCAGGAGGAAGCAACTGATGGTGTCCATGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS GCA 72 bp | CAGTTGCTTCCTCCTGCGGTGAAAAGCAGCCCTGCTTaGCTCACTGTTGATCCTCAGGGGAACAGTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: QLLPPAVKSSPA*LTVDPQGNSGI Trigger: GATGCCACTGTTCCCCTGAGGATCAACAGTGAGGCAAGCAGGGCTGCTTTTCACCGCAGGAGGAAGCAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS CCA 72 bp | GAGGTCGCTGCTGAGAACGGATGTTCTGCTGTGAGATaGAGCCCAGGAAAGACCGGTACTTCAACATGCGCC | + |
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Preference number: 6 (lower is better) Translates to: EVAAENGCSAVR*SPGKTGTSTCA Trigger: GGCGCATGTTGAAGTACCGGTCTTTCCTGGGCTCCATCTCACAGCAGAACATCCGTTCTCAGCAGCGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS CCA 72 bp | ACAGAAACCAGGCTTTGGCTGGATCTGTGTAGAGTCTaGCCTGGCTGTCTGGGCTTGCTGGAGCTCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TETRLWLDLCRV*PGCLGLLELFG Trigger: TCCAAAGAGCTCCAGCAAGCCCAGACAGCCAGGCCAGACTCTACACAGATCCAGCCAAAGCCTGGTTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000209847.2 ENSMUST00000209954.2 ENSMUST00000210139.2 ENSMUST00000211709.2 |
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| CDS CAA 72 bp | AACATGCGCCATTCAGGATTTAGCTGTAGGCCATACTaGTCCTCAAGGCCCTCCCTGGCGATGGTGACCACC | + |
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Preference number: 6 (lower is better) Translates to: NMRHSGFSCRPY*SSRPSLAMVTT Trigger: GGTGGTCACCATCGCCAGGGAGGGCCTTGAGGACAAGTATGGCCTACAGCTAAATCCTGAATGGCGCATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS TCA 72 bp | TCCTGCGGTGAAAAGCAGCCCTGCTTGCCTCACTGTTaGTCCTCAGGGGAACAGTGGCATCCAGATGATACA | + |
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Preference number: 6 (lower is better) Translates to: SCGEKQPCLPHC*SSGEQWHPDDT Trigger: TGTATCATCTGGATGCCACTGTTCCCCTGAGGATCAACAGTGAGGCAAGCAGGGCTGCTTTTCACCGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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| CDS GCA 72 bp | GTGAGATGGAGCCCAGGAAAGACCGGTACTTCAACATaGGCCATTCAGGATTTAGCTGTAGGCCATACTTGT | + |
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Preference number: 6 (lower is better) Translates to: VRWSPGKTGTST*AIQDLAVGHTC Trigger: ACAAGTATGGCCTACAGCTAAATCCTGAATGGCGCATGTTGAAGTACCGGTCTTTCCTGGGCTCCATCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085375.13 ENSMUST00000107811.4 ENSMUST00000210139.2 |
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