Pregenerated sensors for PIGZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045625Ensembl transcript IDs: ENSMUST00000052174.3, ENSMUST00000134666.3, ENSMUST00000134928.2, ENSMUST00000151412.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAAAATTCCCAGGGCCGTGTAGCCTGCACACCCAGGATGTCCTCTaGAGAGAGAGAGGCAGGGGTGAGCCAGTTCCAAGCTTAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: VKFPGPCSLHTQDVL*RERGRGEPVPSLGL Trigger: CAAGCCTAAGCTTGGAACTGGCTCACCCCTGCCTCTCTCTCTGCAGAGGACATCCTGGGTGTGCAGGCTACACGGCCCTGGGAATTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| 3UTR CAA 90 bp | CTCTGCAGAGAGAGAGGCAGGGGTGAGCCAGTTCCAAGCTTAGGCTaGCGCAGGCTCGCGTTCTGGGTTATCGGCAGGATTGCAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LCRERGRGEPVPSLG*RRLAFWVIGRIARP Trigger: GGGCCTTGCAATCCTGCCGATAACCCAGAACGCGAGCCTGCGCAAGCCTAAGCTTGGAACTGGCTCACCCCTGCCTCTCTCTCTGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| 3UTR TCA 72 bp | CACCCAGGATGTCCTCTGCAGAGAGAGAGGCAGGGGTaGGCCAGTTCCAAGCTTAGGCTTGCGCAGGCTCGC | + |
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Preference number: 3 (lower is better) Translates to: HPGCPLQRERQG*ASSKLRLAQAR Trigger: GCGAGCCTGCGCAAGCCTAAGCTTGGAACTGGCTCACCCCTGCCTCTCTCTCTGCAGAGGACATCCTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| CDS-3UTR GCA 90 bp | GCCCAGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGGGAAGACCACAGTaGGGCAGGAGCTGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AQKREQRGSCSNVPAQQPVGRPQ*GRSCWG Trigger: ACCCCAGCAGCTCCTGCCGCACTGTGGTCTTCCCAC...AGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | GCCCAGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTAGCACCAGGGCCTCCTaGATCAGGGCCCTGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: AQKREQRGSCSNVPAQQPSTRAS*IRALMP Trigger: TGGCATCAGGGCCCTGATCCAGGAGGCCCTGGTGCT...AGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | CCCAGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGGAGCCGACAGGGCCATaGCTCACCAGCCAGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PRRESSGAPVPMSQPSSLEPTGP*LTSQLA Trigger: TGCCAACTGGCTGGTGAGCCATGGCCCTGTCGGCTC...CAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | GGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGGCTCCGCCAGAGGTCAGCAGTaGGAAGACCACAGTGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSPKTTLGCAQKREQRGSARGQQ*EDHSAA Trigger: TGCCGCACTGTGGTCTTCCCACTGCTGACCTCTGGC...GGAGCCCCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTAGAGCAGCCTGCAGAGCTTaGGCATGCAACACCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RESSGAPVPMSQPSSLCRAACRA*ACNTPK Trigger: CTTTGGGGTGTTGCATGCTCAAGCTCTGCAGGCTGC...TCTACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| 3UTR CAA 72 bp | GAGAGAGGCAGGGGTGAGCCAGTTCCAAGCTTAGGCTaGCGCAGGCTCGCGTTCTGGGTTATCGGCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: ERGRGEPVPSLG*RRLAFWVIGRI Trigger: AATCCTGCCGATAACCCAGAACGCGAGCCTGCGCAAGCCTAAGCTTGGAACTGGCTCACCCCTGCCTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| CDS-3UTR TCA 90 bp | GTCCTCTGCAGAGAGAGAGGCAGGGGTGAGCCAGTTCCAAGCTTAGGCTTGCGCAGCTTCCACCTGCCATaGCCTCAGGTGACTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VLCRERGRGEPVPSLGLRSFHLP*PQVTGR Trigger: TCTTCCAGTCACCTGAGGTCATGGCAGGTGGAAGCT...GCGCAAGCCTAAGCTTGGAACTGGCTCACCCCTGCCTCTCTCTCTGCAGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTGTGGAGTTGTTGCCATaGAGCCTGCAGAGCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRESSGAPVPMSQPSSLCVELLP*SLQSLS Trigger: GCTCAAGCTCTGCAGGCTGCATGGCAACAACTCCAC...ACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | GGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGGCTCCAGTACCAGCTGTCCGTaGCTACACACAGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSPKTTLGCAQKREQRGSSTSCP*LHTALQ Trigger: CTGCAGTGCTGTGTGTAGCCACGGACAGCTGGTACT...GGAGCCCCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | AATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGAGCGCCCAGGATGTTaGAGAGGACCAGGGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: NVGSPKTTLGCAQKREQRERPGC*RGPGCL Trigger: AAGGCACCCTGGTCCTCTTCAACATCCTGGGCGCTC...CCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTAGAACATGGAGACTAAGGTaGTTCCTCCAAGCCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RESSGAPVPMSQPSSLCRTWRLR*FLQAPL Trigger: CAGTGGGGCTTGGAGGAAGCACCTTAGTCTCCATGT...TCTACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | AATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGTGCGGCAGGAGCTGCTaGGGTAAAATTCCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: NVGSPKTTLGCAQKREQRCGRSC*GKIPRA Trigger: GGCCCTGGGAATTTTACCCCAGCAGCTCCTGCCGCA...CCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | GGAGCTGCTGGGGTAAAATTCCCAGGGCCGTGTAGCCTGCACACCCAGGATGTCTGCCATGACCTCAGGTaGCTGGAAGAATTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: GAAGVKFPGPCSLHTQDVCHDLR*LEEFIW Trigger: CCAGATGAATTCTTCCAGTCACCTGAGGTCATGGCA...GACATCCTGGGTGTGCAGGCTACACGGCCCTGGGAATTTTACCCCAGCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| CDS-3UTR TCA 90 bp | AACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCTGGATCAGGGCCCTaGTGCCACCAAGTTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NNLRLCPEERAAGLLFQCPGSGP*CHQVLK Trigger: CTTCAGAACTTGGTGGCATCAGGGCCCTGATCCAGG...ACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR GCA 90 bp | AATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGCAGTGCGGCAGGAGCTaGTGGGGTAAAATTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVGSPKTTLGCAQKREQRQCGRS*WGKIPR Trigger: CCTGGGAATTTTACCCCAGCAGCTCCTGCCGCACTG...CCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR GCA 90 bp | AGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGGGCTACACACAGCACTaGAGCAAGAGCAGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RNVGSPKTTLGCAQKREQGYTQH*SKSSPW Trigger: CCAGGGGCTGCTCTTGCTGCAGTGCTGTGTGTAGCC...CTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTTCCTCCAGGGTCAAGTaGGGAAACAAGAGAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RRESSGAPVPMSQPSSLCSSRVK*GNKRVS Trigger: TGAGACTCTCTTGTTTCCCCACTTGACCCTGGAGGA...ACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | AATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGGATGTCCTCTGCCATaGCCTCAGGTGACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVGSPKTTLGCAQKREQRGCPLP*PQVTGR Trigger: TCTTCCAGTCACCTGAGGTCATGGCAGAGGACATCC...CCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | AGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTTGTAGAAAACCAGGGTaGCATAGGAACCAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RRESSGAPVPMSQPSSLCCRKPG*HRNQTA Trigger: TGCTGTCTGGTTCCTATGTCACCCTGGTTTTCTACA...ACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTCTAAGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGGCGTGGAGTTGTTaGCATGCAGCCTGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GCLRQRNVGSPKTTLGCAQAWSC*HAACRA Trigger: AGCTCTGCAGGCTGCATGGCAACAACTCCACGCCTG...GGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCTTAGACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTCTAAGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCGGCGTGTGGACTATCTaGTCCAGGTACTTCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GCLRQRNVGSPKTTLGCAGVWTI*SRYFRP Trigger: GGGCCTGAAGTACCTGGAGCAGATAGTCCACACGCC...GGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCTTAGACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGGGTGAGCCAGTTCCAAGCTTAGGCTTGCGCAGGCTCGCGTTCTGGCTGGAAGAATTCATCTaGGTGTATGTAGCCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RGRGEPVPSLGLRRLAFWLEEFI*VYVASL Trigger: CAGACTGGCTACATACACCCAGATGAATTCTTCCAG...CCAGAACGCGAGCCTGCGCAAGCCTAAGCTTGGAACTGGCTCACCCCTGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| CDS-3UTR TCA 90 bp | AACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTAAGTTGTTCAGGGCTTaGCACAGGACCCTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: NNLRLCPEERAAGLLFQCKLFRA*HRTLSS Trigger: TGAGGACAGGGTCCTGTGTCAAGCCCTGAACAACTT...ACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR GCA 90 bp | AGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCAGGAAGCCATTGACTaGCAAGTGAGTGAGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: RNVGSPKTTLGCAQKREQQEAID*QVSEPC Trigger: GCACGGCTCACTCACTTGGCAGTCAATGGCTTCCTG...CTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | GGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGGCTCCATGACCTCAGGTGACTaGAAGAATTCATCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GSPKTTLGCAQKREQRGSMTSGD*KNSSGC Trigger: ACACCCAGATGAATTCTTCCAGTCACCTGAGGTCAT...GGAGCCCCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | CTCTGCAGAGAGAGAGGCAGGGGTGAGCCAGTTCCAAGCTTAGGCTTGCGCAGGATGACCTCAGGTGACTaGAAGAATTCATCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LCRERGRGEPVPSLGLRRMTSGD*KNSSGC Trigger: ACACCCAGATGAATTCTTCCAGTCACCTGAGGTCAT...CCTGCGCAAGCCTAAGCTTGGAACTGGCTCACCCCTGCCTCTCTCTCTGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| CDS-3UTR CCA 90 bp | AGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGTGGATCTCGAGAGGCTaGAGAAGTACCAGCTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: RNVGSPKTTLGCAQKREQWISRG*RSTSCP Trigger: CGGACAGCTGGTACTTCTCCAGCCTCTCGAGATCCA...CTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTCTAAGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCTGCCATGACCTCAGGTaGCTGGAAGAATTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCLRQRNVGSPKTTLGCACHDLR*LEEFIW Trigger: CCAGATGAATTCTTCCAGTCACCTGAGGTCATGGCA...GGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCTTAGACAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | AACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTAGAGAGTCTCATTCTTaGGGGGAAAACGGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: NNLRLCPEERAAGLLFQCRESHS*GENGTS Trigger: AGAAGTGCCGTTTTCCCCTCAAGAATGAGACTCTCT...ACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAAGAGCAGTCCCTCGATaGTGTTGGAGAAGGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: RQRNVGSPKTTLGCAQKRRAVPR*CWRRFL Trigger: CAAGAACCTTCTCCAACACCATCGAGGGACTGCTCT...TCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTCTAAGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCAGTTCTGAAGCTCTATaGATGCCCCAGAGAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GCLRQRNVGSPKTTLGCASSEAL*MPQRER Trigger: CCTCTCTCTCTGGGGCATCCATAGAGCTTCAGAACT...GGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCTTAGACAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTCTAAGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCAGAAATCTAGCCTCTTaGTGGCTGAAGGCAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GCLRQRNVGSPKTTLGCARNLAS*WLKAES Trigger: GCTTTCTGCCTTCAGCCATCAAGAGGCTAGATTTCT...GGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCTTAGACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | AATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGCGGCTGGAAGAATTCATCTaGGTGTATGTAGCCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: NVGSPKTTLGCAQKREQRLEEFI*VYVASL Trigger: CAGACTGGCTACATACACCCAGATGAATTCTTCCAG...CCGCTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGTCCCTCGATGGTGTTaGAGAAGGTTCTTGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RQRNVGSPKTTLGCAQKRVPRWC*RRFLCR Trigger: TCTACACAAGAACCTTCTCCAACACCATCGAGGGAC...TCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR TCA 90 bp | AACATGACAATGATTGGAAATAATGGCATAGAAGCAGACAGGTGCCCATGCTATGCACCAGCAGCCAGGTaGAGAGCAGTCCCTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: NMTMIGNNGIEADRCPCYAPAAR*RAVPRW Trigger: CCATCGAGGGACTGCTCTTCACCTGGCTGCTGGTGC...ATAGCATGGGCACCTGTCTGCTTCTATGCCATTATTTCCAATCATTGTCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGATCCAGTTCTATGACATaGAGACTAAGGTGCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RQRNVGSPKTTLGCAQKRSSSMT*RLRCFL Trigger: GAGGAAGCACCTTAGTCTCCATGTCATAGAACTGGA...TCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CCA 90 bp | AGACAACAGACCCCGGGCACCCCGCACCCTGGAGAGACCCGTTTGTaGGGATGCACGGAGGCAGGCGTGGAGTTGTTGCCATGCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RQQTPGTPHPGETRL*GCTEAGVELLPCSL Trigger: CAGGCTGCATGGCAACAACTCCACGCCTGCCTCCGTGCATCCCCACAAACGGGTCTCTCCAGGGTGCGGGGTGCCCGGGGTCTGTTGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | GGGCCAGATCGTACACAGCCCAGTCCAGGGCAAAGGAGAGGGCGGTaGGAAGGAATCGGGGCCCCACCAGCAGCATGTAGCCACTCACCA | + |
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Preference number: 5 (lower is better) Translates to: GPDRTQPSPGQRRGR*EGIGAPPAACSHSP Trigger: TGGTGAGTGGCTACATGCTGCTGGTGGGGCCCCGATTCCTTCTCACCGCCCTCTCCTTTGCCCTGGACTGGGCTGTGTACGATCTGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | GACAGGGCCATGGCTCACCAGCCAGTTGGCAGGCAGGTTGTCTGCTaGAGTTGTTCAGGGCTTGACACAGGACCCTGTCCTCAGCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: DRAMAHQPVGRQVVC*SCSGLDTGPCPQPH Trigger: GTGGGGCTGAGGACAGGGTCCTGTGTCAAGCCCTGAACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCATGGCCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS GCA 90 bp | GGTGACATAGGAACCAGACAGCAGGCACAAGGCATTCCAACGATCTaGCCCCCACAACGGGGCCAGATCGTACACAGCCCAGTCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GDIGTRQQAQGIPTI*PPQRGQIVHSPVQG Trigger: GCCCTGGACTGGGCTGTGTACGATCTGGCCCCGTTGTGGGGGGCAGATCGTTGGAATGCCTTGTGCCTGCTGTCTGGTTCCTATGTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | CCAGCCAGTTGGCAGGCAGGTTGTCTGCTGAAGTTGTTCAGGGCTTaGCACAGGACCCTGTCCTCAGCCCCACCCATGTCTACCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: PASWQAGCLLKLFRA*HRTLSSAPPMSTTS Trigger: GGAGGTGGTAGACATGGGTGGGGCTGAGGACAGGGTCCTGTGTCAAGCCCTGAACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTTCCAGAGCGTGCCTGTaGGTCCCAGGAGTTACCACA | + |
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Preference number: 5 (lower is better) Translates to: RRESSGAPVPMSQPSSLCSRACL*VPGVTT Trigger: TGTGGTAACTCCTGGGACCAACAGGCACGCTCTGGA...ACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | GCACGGAGGCAGGCGTGGAGTTGTTGCCATGCAGCCTGCAGAGCTTaGGCATGCAACACCCCAAAGAGCAGGAAGCCATTGACTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: ARRQAWSCCHAACRA*ACNTPKSRKPLTAK Trigger: CTTGGCAGTCAATGGCTTCCTGCTCTTTGGGGTGTTGCATGCTCAAGCTCTGCAGGCTGCATGGCAACAACTCCACGCCTGCCTCCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | GGCCTGAGAGGTGTAAGAGGTGCTGGGGAGGCATGTAGGTGTGTGTaGAGAGAAGTGTGTAGTGGGTGGTCGTGCCTGAGAGGTCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: GLRGVRGAGEACRCV*REVCSGWSCLRGQA Trigger: CGCCTGACCTCTCAGGCACGACCACCCACTACACACTTCTCTTCACACACACCTACATGCCTCCCCAGCACCTCTTACACCTCTCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTAGAAAGGTTGGCCGGTaGAAGAAGCCAGCAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRESSGAPVPMSQPSSLCRKVGR*KKPAAK Trigger: CTTGGCTGCTGGCTTCTTCAACCGGCCAACCTTTCT...ACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAGAGCAGCGGGGCTCCTGTTCCAATGTCCCAGCCCAGCAGCCTGTGTGTGCCTGGCAAGGTTTaGGGGGTCCAGGTTGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: RRESSGAPVPMSQPSSLCVPGKV*GVQVVV Trigger: TACTACAACCTGGACCCCCAAAACCTTGCCAGGCAC...ACACAGGCTGCTGGGCTGGGACATTGGAACAGGAGCCCCGCTGCTCTCTCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CCA 90 bp | GTGCCTGTTGGTCCCAGGAGTTACCACAAAGAGCCGACAGGGCCATaGCTCACCAGCCAGTTGGCAGGCAGGTTGTCTGCTGAAGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VPVGPRSYHKEPTGP*LTSQLAGRLSAEVV Trigger: AACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCATGGCCCTGTCGGCTCTTTGTGGTAACTCCTGGGACCAACAGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | TGGACTATCTGCTCCAGGTACTTCAGGCCCGGTACCAGACCTCCCTaGTGCAGGCAACCAAAGATGAGAGCGCCCAGGATGTTGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WTICSRYFRPGTRPP*CRQPKMRAPRMLKR Trigger: CCTCTTCAACATCCTGGGCGCTCTCATCTTTGGTTGCCTGCATCAGGGAGGTCTGGTACCGGGCCTGAAGTACCTGGAGCAGATAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | ACCAAGAAGATATCTGTGCCACCGTGGACCTGGGGTAGGCTTCTTTaGTGTAGGACTCCTTACCACACCAGGGGACACCAGCACCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TKKISVPPWTWGRLL*CRTPYHTRGHQHQQ Trigger: CTGCTGGTGCTGGTGTCCCCTGGTGTGGTAAGGAGTCCTACATCAAAGAAGCCTACCCCAGGTCCACGGTGGCACAGATATCTTCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | GCAGGACAGCCCAGGCTTCATAGAGAGCCCTGCCATGACCTCAGGTaGCTGGAAGAATTCATCTGGGTGTATGTAGCCAGTCTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AGQPRLHREPCHDLR*LEEFIWVYVASLGK Trigger: CTTCCCCAGACTGGCTACATACACCCAGATGAATTCTTCCAGTCACCTGAGGTCATGGCAGGGCTCTCTATGAAGCCTGGGCTGTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134928.2 |
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| CDS TCA 90 bp | GACAGCCCAGGCTTCATAGAGAGCCCTGTCTGCCATGACCTCAGGTaGCTGGAAGAATTCATCTGGGTGTATGTAGCCAGTCTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: DSPGFIESPVCHDLR*LEEFIWVYVASLGK Trigger: CTTCCCCAGACTGGCTACATACACCCAGATGAATTCTTCCAGTCACCTGAGGTCATGGCAGACAGGGCTCTCTATGAAGCCTGGGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134666.3 |
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| CDS GCA 90 bp | AAGAGAGTCTCATTCTTGAGGGGAAAACGGCACTTCTCCAGAGCGTaGCTGTTGGTCCCAGGAGTTACCACAAAGAGCCGACAGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRVSFLRGKRHFSRA*LLVPGVTTKSRQGH Trigger: ATGGCCCTGTCGGCTCTTTGTGGTAACTCCTGGGACCAACAGGCACGCTCTGGAGAAGTGCCGTTTTCCCCTCAAGAATGAGACTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CAA 90 bp | AGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGAGAGCAGTGCAGCCTGCAGAGCTaGAGCATGCAACACCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RNVGSPKTTLGCAQKREQCSLQS*SMQHPK Trigger: TTTGGGGTGTTGCATGCTCAAGCTCTGCAGGCTGCA...CTGCTCTCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | CAAGGTTTTGGGGGTCCAGGTTGTAGTACAAGAAGTTGGCAGGTGTaGGAAAGACGCCTGTGGATCTCGAGAGGCTGGAGAAGTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGFGGPGCSTRSWQV*ERRLWISRGWRSTS Trigger: GCTGGTACTTCTCCAGCCTCTCGAGATCCACAGGCGTCTTTCTCACACCTGCCAACTTCTTGTACTACAACCTGGACCCCCAAAACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 90 bp | ATAGCTGCAGGACAGCCCAGGCTTCATAGAGAGCCCTGTCTGCCATaGCCTCAGGTGACTGGAAGAATTCATCTGGGTGTATGTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IAAGQPRLHREPCLP*PQVTGRIHLGVCSQ Trigger: CTGGCTACATACACCCAGATGAATTCTTCCAGTCACCTGAGGTCATGGCAGACAGGGCTCTCTATGAAGCCTGGGCTGTCCTGCAGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134666.3 |
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| CDS TCA 90 bp | TCCTCTCTCCCCAGCTCTTTAACAGCAGAGAGCTTCCACCTGCCATaGCCTCAGGTGACTGGAAGAATTCATCTGGGTGTATGTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLPSSLTAESFHLP*PQVTGRIHLGVCSQ Trigger: CTGGCTACATACACCCAGATGAATTCTTCCAGTCACCTGAGGTCATGGCAGGTGGAAGCTCTCTGCTGTTAAAGAGCTGGGGAGAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151412.2 |
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| CDS GCA 90 bp | CGGTTGAAGAAGCCAGCAGCCAAGATAACACCAAGAAGATATCTGTaGCACCGTGGACCTGGGGTAGGCTTCTTTGATGTAGGACTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLKKPAAKITPRRYL*HRGPGVGFFDVGLL Trigger: AAGGAGTCCTACATCAAAGAAGCCTACCCCAGGTCCACGGTGGCACAGATATCTTCTTGGTGTTATCTTGGCTGCTGGCTTCTTCAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS-3UTR CAA 90 bp | AGGCAGAGGAATGTGGGCTCGCCTAAAACAACCTTAGGCTGTGCCCAGAAGAGACAGAAATCTAGCCTCTaGATGGCTGAAGGCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQRNVGSPKTTLGCAQKRQKSSL*MAEGRK Trigger: CTTTCTGCCTTCAGCCATCAAGAGGCTAGATTTCTG...TCTCTTCTGGGCACAGCCTAAGGTTGTTTTAGGCGAGCCCACATTCCTCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS GCA 72 bp | GGCACCCCGCACCCTGGAGAGACCCGTTTGTGGGGATaGACGGAGGCAGGCGTGGAGTTGTTGCCATGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTPHPGETRLWG*TEAGVELLPCS Trigger: GCTGCATGGCAACAACTCCACGCCTGCCTCCGTGCATCCCCACAAACGGGTCTCTCCAGGGTGCGGGGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS GCA 72 bp | GTGGTCGTGCCTGAGAGGTCAGGCGTGTGGACTATCTaGTCCAGGTACTTCAGGCCCGGTACCAGACCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VVVPERSGVWTI*SRYFRPGTRPP Trigger: GGGAGGTCTGGTACCGGGCCTGAAGTACCTGGAGCAGATAGTCCACACGCCTGACCTCTCAGGCACGACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | CTGGCAACAGCACCAGGGCCTCCTGGATCAGGGCCCTaGTGCCACCAAGTTCTGAAGCTCTATGGATGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LATAPGPPGSGP*CHQVLKLYGCP Trigger: GGGGCATCCATAGAGCTTCAGAACTTGGTGGCATCAGGGCCCTGATCCAGGAGGCCCTGGTGCTGTTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS GCA 72 bp | GGAACCAGACAGCAGGCACAAGGCATTCCAACGATCTaGCCCCCACAACGGGGCCAGATCGTACACAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTRQQAQGIPTI*PPQRGQIVHSP Trigger: TGGGCTGTGTACGATCTGGCCCCGTTGTGGGGGGCAGATCGTTGGAATGCCTTGTGCCTGCTGTCTGGTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS GCA 72 bp | GAGCAGGAAGCCATTGACTGCCAAGTGAGTGAGCCGTaGGTGTGTGCCGTGCCTGGCAAGGTTTTGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EQEAIDCQVSEP*VCAVPGKVLGV Trigger: GACCCCCAAAACCTTGCCAGGCACGGCACACACGCACGGCTCACTCACTTGGCAGTCAATGGCTTCCTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CCA 72 bp | GGTCCCAGGAGTTACCACAAAGAGCCGACAGGGCCATaGCTCACCAGCCAGTTGGCAGGCAGGTTGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRSYHKEPTGP*LTSQLAGRLSA Trigger: AGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCATGGCCCTGTCGGCTCTTTGTGGTAACTCCTGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 90 bp | GGAGAGACCCGTTTGTGGGGATGCACGGAGGCAGGCGTGGAGTTGTaGCCATGCAGCCTGCAGAGCTTGAGCATGCAACACCCCAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GETRLWGCTEAGVEL*PCSLQSLSMQHPKE Trigger: CTCTTTGGGGTGTTGCATGCTCAAGCTCTGCAGGCTGCATGGCAACAACTCCACGCCTGCCTCCGTGCATCCCCACAAACGGGTCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 90 bp | CCTGGAGAGACCCGTTTGTGGGGATGCACGGAGGCAGGCGTGGAGTaGTTGCCATGCAGCCTGCAGAGCTTGAGCATGCAACACCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGETRLWGCTEAGVE*LPCSLQSLSMQHPK Trigger: TTTGGGGTGTTGCATGCTCAAGCTCTGCAGGCTGCATGGCAACAACTCCACGCCTGCCTCCGTGCATCCCCACAAACGGGTCTCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | AACACCCCAAAGAGCAGGAAGCCATTGACTGCCAAGTaGGTGAGCCGTGCGTGTGTGCCGTGCCTGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: NTPKSRKPLTAK*VSRACVPCLAR Trigger: CCTTGCCAGGCACGGCACACACGCACGGCTCACTCACTTGGCAGTCAATGGCTTCCTGCTCTTTGGGGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | TGCTCCAGGTACTTCAGGCCCGGTACCAGACCTCCCTaGTGCAGGCAACCAAAGATGAGAGCGCCCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: CSRYFRPGTRPP*CRQPKMRAPRM Trigger: CATCCTGGGCGCTCTCATCTTTGGTTGCCTGCATCAGGGAGGTCTGGTACCGGGCCTGAAGTACCTGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 72 bp | CGTTTGTGGGGATGCACGGAGGCAGGCGTGGAGTTGTaGCCATGCAGCCTGCAGAGCTTGAGCATGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: RLWGCTEAGVEL*PCSLQSLSMQH Trigger: GTGTTGCATGCTCAAGCTCTGCAGGCTGCATGGCAACAACTCCACGCCTGCCTCCGTGCATCCCCACAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 72 bp | CACAAAGAGCCGACAGGGCCATGGCTCACCAGCCAGTaGGCAGGCAGGTTGTCTGCTGAAGTTGTTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HKEPTGPWLTSQ*AGRLSAEVVQG Trigger: GCCCTGAACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCATGGCCCTGTCGGCTCTTTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 90 bp | TGCACGGAGGCAGGCGTGGAGTTGTTGCCATGCAGCCTGCAGAGCTaGAGCATGCAACACCCCAAAGAGCAGGAAGCCATTGACTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CTEAGVELLPCSLQS*SMQHPKEQEAIDCQ Trigger: TTGGCAGTCAATGGCTTCCTGCTCTTTGGGGTGTTGCATGCTCAAGCTCTGCAGGCTGCATGGCAACAACTCCACGCCTGCCTCCGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CCA 72 bp | ACAAAGAGCCGACAGGGCCATGGCTCACCAGCCAGTTaGCAGGCAGGTTGTCTGCTGAAGTTGTTCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TKSRQGHGSPAS*QAGCLLKLFRA Trigger: AGCCCTGAACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCATGGCCCTGTCGGCTCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 72 bp | ACAGGGCCATGGCTCACCAGCCAGTTGGCAGGCAGGTaGTCTGCTGAAGTTGTTCAGGGCTTGACACAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGPWLTSQLAGR*SAEVVQGLTQD Trigger: GTCCTGTGTCAAGCCCTGAACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCATGGCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 90 bp | AGGAGTTACCACAAAGAGCCGACAGGGCCATGGCTCACCAGCCAGTaGGCAGGCAGGTTGTCTGCTGAAGTTGTTCAGGGCTTGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: RSYHKEPTGPWLTSQ*AGRLSAEVVQGLTQ Trigger: CTGTGTCAAGCCCTGAACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCATGGCCCTGTCGGCTCTTTGTGGTAACTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS CAA 90 bp | GTCTCATTCTTGAGGGGAAAACGGCACTTCTCCAGAGCGTGCCTGTaGGTCCCAGGAGTTACCACAAAGAGCCGACAGGGCCATGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSFLRGKRHFSRACL*VPGVTTKSRQGHGS Trigger: TGAGCCATGGCCCTGTCGGCTCTTTGTGGTAACTCCTGGGACCAACAGGCACGCTCTGGAGAAGTGCCGTTTTCCCCTCAAGAATGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | CAGGCGTGGAGTTGTTGCCATGCAGCCTGCAGAGCTTaGGCATGCAACACCCCAAAGAGCAGGAAGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: QAWSCCHAACRA*ACNTPKSRKPL Trigger: CAATGGCTTCCTGCTCTTTGGGGTGTTGCATGCTCAAGCTCTGCAGGCTGCATGGCAACAACTCCACGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | ATGGCTCACCAGCCAGTTGGCAGGCAGGTTGTCTGCTaGAGTTGTTCAGGGCTTGACACAGGACCCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MAHQPVGRQVVC*SCSGLDTGPCP Trigger: AGGACAGGGTCCTGTGTCAAGCCCTGAACAACTTCAGCAGACAACCTGCCTGCCAACTGGCTGGTGAGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | TCTGGGGAAGGAGACACCATAAGACACGAAGCAGGCTaGAGCTACCCCAAATCACCTGGGCTGCCACCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SGEGDTIRHEAG*SYPKSPGLPPS Trigger: TGATGGTGGCAGCCCAGGTGATTTGGGGTAGCTTCAGCCTGCTTCGTGTCTTATGGTGTCTCCTTCCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052174.3 ENSMUST00000134666.3 ENSMUST00000134928.2 ENSMUST00000151412.2 |
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| CDS TCA 72 bp | ATATCTGTGCCACCGTGGACCTGGGGTAGGCTTCTTTaGTGTAGGACTCCTTACCACACCAGGGGACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISVPPWTWGRLL*CRTPYHTRGHQ Trigger: CTGGTGTCCCCTGGTGTGGTAAGGAGTCCTACATCAAAGAAGCCTACCCCAGGTCCACGGTGGCACAGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | GTGTGTGAAGAGAAGTGTGTAGTGGGTGGTCGTGCCTaGGAGGTCAGGCGTGTGGACTATCTGCTCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VCEEKCVVGGRA*EVRRVDYLLQV Trigger: TACCTGGAGCAGATAGTCCACACGCCTGACCTCTCAGGCACGACCACCCACTACACACTTCTCTTCACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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| CDS TCA 72 bp | GGACAGCCCAGGCTTCATAGAGAGCCCTGTCTGCCATaGCCTCAGGTGACTGGAAGAATTCATCTGGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GQPRLHREPCLP*PQVTGRIHLGV Trigger: TACACCCAGATGAATTCTTCCAGTCACCTGAGGTCATGGCAGACAGGGCTCTCTATGAAGCCTGGGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134666.3 |
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| CDS GCA 72 bp | AAGCCAGCAGCCAAGATAACACCAAGAAGATATCTGTaGCACCGTGGACCTGGGGTAGGCTTCTTTGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: KPAAKITPRRYL*HRGPGVGFFDV Trigger: TACATCAAAGAAGCCTACCCCAGGTCCACGGTGGCACAGATATCTTCTTGGTGTTATCTTGGCTGCTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052174.3 |
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