Pregenerated sensors for PIGYL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000010607

Ensembl transcript IDs: ENSMUST00000123680.2, ENSMUST00000148088.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	ACAAAAGAATCTGCAACAGCCAGGAACCTCCGGCCATaGCCCACTCCGCAGGCAGCCCGAGCAGGAGGGGCC	+
Preference number: 3 (lower is better) Translates to: TKESATARNLRP*PTPQAARAGGA Trigger: GGCCCCTCCTGCTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAGATTCTTTTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR GCA 90 bp	AGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAGCAGGAGGGGCCTCGGGCTGCTGGCGCTGGTaGAGCCCTCTGGGAAGCCTT	+
Preference number: 4 (lower is better) Translates to: RNLRPCPTPQAARAGGASGCWRW*SPLGSL Trigger: AAGGCTTCCCAGAGGGCTGCACCAGCGCCAGCAGCC...CGAGGCCCCTCCTGCTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR GCA 90 bp	CAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAGCAGGAGGGGCCTCTGTAGAAGCACAGGCTaGTGGCGCTGGTGCAGCCCT	+
Preference number: 4 (lower is better) Translates to: QEPPAMPHSAGSPSRRGLCRSTG*WRWCSP Trigger: AGGGCTGCACCAGCGCCAGCAGCCTGTGCTTCTACA...GAGGCCCCTCCTGCTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR CCA 90 bp	CTGCAACAGCCAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAGCAGGCTGGTGCAGCCCTCTaGGAAGCCTTCCTCCACGGA	+
Preference number: 4 (lower is better) Translates to: LQQPGTSGHAPLRRQPEQAGAAL*EAFLHG Trigger: TCCGTGGAGGAAGGCTTCCCAGAGGGCTGCACCAGC...CTGCTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR CCA 90 bp	GAATCTGCAACAGCCAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAACAGGCTGCTGGCGCTaGTGCAGCCCTCTGGGAAGC	+
Preference number: 4 (lower is better) Translates to: ESATARNLRPCPTPQAARTGCWR*CSPLGS Trigger: GCTTCCCAGAGGGCTGCACCAGCGCCAGCAGCCTGT...TCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAGATTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR CCA 90 bp	AATCTGCAACAGCCAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAGAGAAGCACAGGCTGCTaGCGCTGGTGCAGCCCTCTG	+
Preference number: 4 (lower is better) Translates to: NLQQPGTSGHAPLRRQPERSTGC*RWCSPL Trigger: CAGAGGGCTGCACCAGCGCCAGCAGCCTGTGCTTCT...CTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAGATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR GCA 90 bp	AATCTGCAACAGCCAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAGTGTAGAAGCACAGGCTaGTGGCGCTGGTGCAGCCCT	+
Preference number: 4 (lower is better) Translates to: NLQQPGTSGHAPLRRQPECRSTG*WRWCSP Trigger: AGGGCTGCACCAGCGCCAGCAGCCTGTGCTTCTACA...CTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAGATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR CCA 90 bp	AAGAATCTGCAACAGCCAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGCTGGTGCAGCCCTCTaGGAAGCCTTCCTCCACGGA	+
Preference number: 4 (lower is better) Translates to: KNLQQPGTSGHAPLRRQPAGAAL*EAFLHG Trigger: TCCGTGGAGGAAGGCTTCCCAGAGGGCTGCACCAGC...GGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAGATTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR CCA 90 bp	CAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAGCAGGAGGGGCCTCATCCATGTCCACAGATaGAAGAACACGTACACAGGC	+
Preference number: 4 (lower is better) Translates to: QEPPAMPHSAGSPSRRGLIHVHR*KNTYTG Trigger: GCCTGTGTACGTGTTCTTCCATCTGTGGACATGGAT...GAGGCCCCTCCTGCTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR CCA 90 bp	AGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGCCCGAGCAGGAGGGGCCTCGATCCATGTCCACAGATaGAAGAACACGTACACAGGC	+
Preference number: 4 (lower is better) Translates to: RNLRPCPTPQAARAGGASIHVHR*KNTYTG Trigger: GCCTGTGTACGTGTTCTTCCATCTGTGGACATGGAT...CGAGGCCCCTCCTGCTCGGGCTGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR GCA 90 bp	ACAAAAGAATCTGCAACAGCCAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAGGCTGCTGGCGCTGGTaGAGCCCTCTGGGAAGCCTT	+
Preference number: 4 (lower is better) Translates to: TKESATARNLRPCPTPQAGCWRW*SPLGSL Trigger: AAGGCTTCCCAGAGGGCTGCACCAGCGCCAGCAGCC...TGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAGATTCTTTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS-3UTR CCA 90 bp	ACAAAAGAATCTGCAACAGCCAGGAACCTCCGGCCATGCCCCACTCCGCAGGCAACAGGCTGCTGGCGCTaGTGCAGCCCTCTGGGAAGC	+
Preference number: 4 (lower is better) Translates to: TKESATARNLRPCPTPQATGCWR*CSPLGS Trigger: GCTTCCCAGAGGGCTGCACCAGCGCCAGCAGCCTGT...TGCCTGCGGAGTGGGGCATGGCCGGAGGTTCCTGGCTGTTGCAGATTCTTTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS CCA 72 bp	GGAGGCGGAGTAGAGCAGGCCTGCCAGCGAGACCAGTaGGATGAGGACGGTCATGGTGGGCAGGGACCGGAT	+
Preference number: 6 (lower is better) Translates to: GGGVEQACQRDQ*DEDGHGGQGPD Trigger: ATCCGGTCCCTGCCCACCATGACCGTCCTCATCCCACTGGTCTCGCTGGCAGGCCTGCTCTACTCCGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2
CDS CCA 72 bp	TGTCTGAAGAGCTTCAGGCCCATCCATGTCCACAGATaGAAGAACACGTACACAGGCACGGTGACCGGCAAG	+
Preference number: 6 (lower is better) Translates to: CLKSFRPIHVHR*KNTYTGTVTGK Trigger: CTTGCCGGTCACCGTGCCTGTGTACGTGTTCTTCCATCTGTGGACATGGATGGGCCTGAAGCTCTTCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123680.2 ENSMUST00000148088.2