RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIGX (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023791

Ensembl transcript IDs: ENSMUST00000133584.8, ENSMUST00000136643.2, ENSMUST00000144216.2, ENSMUST00000147003.8, ENSMUST00000147688.8

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGTTTGGGCATTCTCACACTTCGCTGGATGCCGAGGGTTCACTaGCTCTCAGGCAGCACAAGGCATCTTCAGGGGAACCATAAGCAC +
Preference number: 1 (lower is better)
Translates to: CCLGILTLRWMPRVH*LSGSTRHLQGNHKH
Trigger: GTGCTTATGGTTCCCCTGAAGATGCCTTGTGCTGCCTGAGAGGCAGTGAACCCTCGGCATCCAGCGAAGTGTGAGAATGCCCAAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR CCA 90 bp TGTCACACAACACATCACCTCACCCCTTCTCCCATACATGCTGTTTaGGCATTCTCACACTTCGCTGGATGCCGAGGGTTCACTGCCTCT +
Preference number: 1 (lower is better)
Translates to: CHTTHHLTPSPIHAV*AFSHFAGCRGFTAS
Trigger: AGAGGCAGTGAACCCTCGGCATCCAGCGAAGTGTGAGAATGCCCAAACAGCATGTATGGGAGAAGGGGTGAGGTGATGTGTTGTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR GCA 90 bp GGAAGTATGTCACACAACACATCACCTCACCCCTTCTCCCATACATaGTGTTTGGGCATTCTCACACTTCGCTGGATGCCGAGGGTTCAC +
Preference number: 1 (lower is better)
Translates to: GSMSHNTSPHPFSHT*CLGILTLRWMPRVH
Trigger: GTGAACCCTCGGCATCCAGCGAAGTGTGAGAATGCCCAAACAGCATGTATGGGAGAAGGGGTGAGGTGATGTGTTGTGTGACATACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR GCA 90 bp TACAAAGGTTACCTTTCTGGAGTGAGCAGGTTGTGCGTGTGTGCGTaGGTGCGTGTGTCCCTGGGAAGTATGTCACACAACACATCACCT +
Preference number: 1 (lower is better)
Translates to: YKGYLSGVSRLCVCA*VRVSLGSMSHNTSP
Trigger: AGGTGATGTGTTGTGTGACATACTTCCCAGGGACACACGCACGCACGCACACACGCACAACCTGCTCACTCCAGAAAGGTAACCTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR TCA 90 bp AGGCCTGGAAGCAGTCGATGCACTGTGCATCCTGCCGGGCATAAATaGGGACTGCAGATTCATTGGACAAGTAGTTGGGGGCTTCTATAT +
Preference number: 1 (lower is better)
Translates to: RPGSSRCTVHPAGHK*GLQIHWTSSWGLLY
Trigger: ATATAGAAGCCCCCAACTACTTGTCCAATGAATCTGCAGTCCTCATTTATGCCCGGCAGGATGCACAGTGCATCGACTGCTTCCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133584.8
ENSMUST00000147003.8
3UTR CCA 90 bp ATCATTGGTTTACCAAACTGGACACTGGTACAAAGGTTACCTTTCTaGAGTGAGCAGGTTGTGCGTGTGTGCGTGCGTGCGTGTGTCCCT +
Preference number: 1 (lower is better)
Translates to: IIGLPNWTLVQRLPF*SEQVVRVCVRACVP
Trigger: AGGGACACACGCACGCACGCACACACGCACAACCTGCTCACTCCAGAAAGGTAACCTTTGTACCAGTGTCCAGTTTGGTAAACCAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR GCA 90 bp GAAGCAGTCGATGCACTGTGCATCCTGCCGGGCATAAATGAGGACTaGAGATTCATTGGACAAGTAGTTGGGGGCTTCTATATTAAAACT +
Preference number: 1 (lower is better)
Translates to: EAVDALCILPGINED*RFIGQVVGGFYIKT
Trigger: AGTTTTAATATAGAAGCCCCCAACTACTTGTCCAATGAATCTGCAGTCCTCATTTATGCCCGGCAGGATGCACAGTGCATCGACTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000133584.8
ENSMUST00000147003.8
3UTR CAA 90 bp ATGTCACACAACACATCACCTCACCCCTTCTCCCATACATGCTGTTaGGGCATTCTCACACTTCGCTGGATGCCGAGGGTTCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: MSHNTSPHPFSHTCC*GILTLRWMPRVHCL
Trigger: GAGGCAGTGAACCCTCGGCATCCAGCGAAGTGTGAGAATGCCCAAACAGCATGTATGGGAGAAGGGGTGAGGTGATGTGTTGTGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR-3UTR CCA 90 bp GTCGGGGTTGTTGACCACAATGAGGGTGTCTCCATCTTTCTTATGTGGCCGGTGACAGGTAAAAAGGCCTaGAAGCAGTCGATGCACTGT +
Preference number: 2 (lower is better)
Translates to: VGVVDHNEGVSIFLMWPVTGKKA*KQSMHC
Trigger: ACAGTGCATCGACTGCTTCCAGGCCTTTTTACCTGT...CACCGGCCACATAAGAAAGATGGAGACACCCTCATTGTGGTCAACAACCCCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000133584.8
ENSMUST00000147003.8
3UTR-3UTR CCA 90 bp GTGGCCGGTGATAGCGATAGTGCACAGGTAAAAAGGCCTGGAAGCAGTCGATGCATCCACAAAGAGTCCTaGTGGAATGTAATGCTTAAT +
Preference number: 2 (lower is better)
Translates to: VAGDSDSAQVKRPGSSRCIHKES*WNVMLN
Trigger: ATTAAGCATTACATTCCACCAGGACTCTTTGTGGAT...GCATCGACTGCTTCCAGGCCTTTTTACCTGTGCACTATCGCTATCACCGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133584.8
ENSMUST00000147003.8
3UTR-3UTR CCA 90 bp GTGGCCGGTGATAGCGATAGTGCACAGGTAAAAAGGCCTGGAAGCAGTCGATGCTCCATCTTCTGTCTGTaGAAACCATCTTTCAAAAAT +
Preference number: 2 (lower is better)
Translates to: VAGDSDSAQVKRPGSSRCSIFCL*KPSFKN
Trigger: ATTTTTGAAAGATGGTTTCCACAGACAGAAGATGGA...GCATCGACTGCTTCCAGGCCTTTTTACCTGTGCACTATCGCTATCACCGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000147003.8
3UTR CAA 90 bp TTCAAAATTGGAAACTCTTGGTCACAGTACATCAGTAAGTCGGGGTaGTTGACCACAATGAGGGTGTCTCCATCTTTCTTATGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: FKIGNSWSQYISKSG*LTTMRVSPSFLCGR
Trigger: CCGGCCACATAAGAAAGATGGAGACACCCTCATTGTGGTCAACAACCCCGACTTACTGATGTACTGTGACCAAGAGTTTCCAATTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147003.8
3UTR-3UTR GCA 90 bp GTTGACCACAATGAGGGTGTCTCCATCTTTCTTATGTGGCCGGTGATAGCGATAGGCATAAATGAGGACTaGAGATTCATTGGACAAGTA +
Preference number: 2 (lower is better)
Translates to: VDHNEGVSIFLMWPVIAIGINED*RFIGQV
Trigger: TACTTGTCCAATGAATCTGCAGTCCTCATTTATGCC...TATCGCTATCACCGGCCACATAAGAAAGATGGAGACACCCTCATTGTGGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133584.8
ENSMUST00000147003.8
3UTR-3UTR CCA 90 bp TCCTTGCTTCTAGTAAGTAGCCCCTCACCCATATTTCTAATAGTAGCCCCAATTCCCATACATGCTGTTTaGGCATTCTCACACTTCGCT +
Preference number: 2 (lower is better)
Translates to: SLLLVSSPSPIFLIVAPIPIHAV*AFSHFA
Trigger: AGCGAAGTGTGAGAATGCCCAAACAGCATGTATGGG...AATTGGGGCTACTATTAGAAATATGGGTGAGGGGCTACTTACTAGAAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR CAA 90 bp GTCAGTCCCACTGGAACCTGCACTGTCAAATTCTTAAGTATTGATTaGTACTGCATGCTTTTCCACTGGCAGATCTCCTCACTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: VSPTGTCTVKFLSID*YCMLFHWQISSLFK
Trigger: TTTGAAGAGTGAGGAGATCTGCCAGTGGAAAAGCATGCAGTACAAATCAATACTTAAGAATTTGACAGTGCAGGTTCCAGTGGGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147688.8
3UTR-3UTR GCA 90 bp GCTAAAAGGATCAAAGTAGAACACAGAATCGTAATGAGCAGCGTCACAGAACACAGTATTGATTTGTACTaGATGCTTTTCCACTGGCAG +
Preference number: 2 (lower is better)
Translates to: AKRIKVEHRIVMSSVTEHSIDLY*MLFHWQ
Trigger: CTGCCAGTGGAAAAGCATGCAGTACAAATCAATACT...GTGTTCTGTGACGCTGCTCATTACGATTCTGTGTTCTACTTTGATCCTTTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147688.8
3UTR-3UTR CCA 90 bp AAAGTAGAACACAGAATCGTAATGAGCAGCGTCACAGAACACACTAAAGAGGTATATAGTCAGTCCCACTaGAACCTGCACTGTCAAATT +
Preference number: 2 (lower is better)
Translates to: KVEHRIVMSSVTEHTKEVYSQSH*NLHCQI
Trigger: AATTTGACAGTGCAGGTTCCAGTGGGACTGACTATA...TACCTCTTTAGTGTGTTCTGTGACGCTGCTCATTACGATTCTGTGTTCTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147688.8
3UTR GCA 72 bp GGCATTCTCACACTTCGCTGGATGCCGAGGGTTCACTaGCTCTCAGGCAGCACAAGGCATCTTCAGGGGAAC +
Preference number: 3 (lower is better)
Translates to: GILTLRWMPRVH*LSGSTRHLQGN
Trigger: GTTCCCCTGAAGATGCCTTGTGCTGCCTGAGAGGCAGTGAACCCTCGGCATCCAGCGAAGTGTGAGAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR CCA 72 bp GCAGGTTGTGCGTGTGTGCGTGCGTGCGTGTGTCCCTaGGAAGTATGTCACACAACACATCACCTCACCCCT +
Preference number: 3 (lower is better)
Translates to: AGCACVRACVCP*EVCHTTHHLTP
Trigger: AGGGGTGAGGTGATGTGTTGTGTGACATACTTCCCAGGGACACACGCACGCACGCACACACGCACAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR TCA 72 bp AGCAGTCGATGCACTGTGCATCCTGCCGGGCATAAATaGGGACTGCAGATTCATTGGACAAGTAGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: SSRCTVHPAGHK*GLQIHWTSSWG
Trigger: CCCCCAACTACTTGTCCAATGAATCTGCAGTCCTCATTTATGCCCGGCAGGATGCACAGTGCATCGACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133584.8
ENSMUST00000147003.8
3UTR CCA 72 bp AAGATACTTCGTGGCTTGCTGTACTTGTTTCGTACTTaGGTCACAGCGTGGCCAGTCCCGCCTTGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: KILRGLLYLFRT*VTAWPVPPWKD
Trigger: GTCTTTCCAAGGCGGGACTGGCCACGCTGTGACCCAAGTACGAAACAAGTACAGCAAGCCACGAAGTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR CCA 72 bp TTACCAAACTGGACACTGGTACAAAGGTTACCTTTCTaGAGTGAGCAGGTTGTGCGTGTGTGCGTGCGTGCG +
Preference number: 3 (lower is better)
Translates to: LPNWTLVQRLPF*SEQVVRVCVRA
Trigger: CGCACGCACGCACACACGCACAACCTGCTCACTCCAGAAAGGTAACCTTTGTACCAGTGTCCAGTTTGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR GCA 72 bp ACCTGCACTGTCAAATTCTTAAGTATTGATTTGTACTaGATGCTTTTCCACTGGCAGATCTCCTCACTCTTC +
Preference number: 3 (lower is better)
Translates to: TCTVKFLSIDLY*MLFHWQISSLF
Trigger: GAAGAGTGAGGAGATCTGCCAGTGGAAAAGCATGCAGTACAAATCAATACTTAAGAATTTGACAGTGCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147688.8
CDS-3UTR TCA 90 bp CTTGGAAAGACAAAGCCCGGCTCTGAAGCCCGGGATGGGACCCCCAGCAAAGATACTCGCTCAGCCCCCTaGCCTTTACCAGCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LGKTKPGSEARDGTPSKDTRSAP*PLPALK
Trigger: TTTCAGCGCTGGTAAAGGTCAGGGGGCTGAGCGAGT...ATCTTTGCTGGGGGTCCCATCCCGGGCTTCAGAGCCGGGCTTTGTCTTTCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
3UTR CAA 72 bp CACTGGTACAAAGGTTACCTTTCTGGAGTGAGCAGGTaGTGCGTGTGTGCGTGCGTGCGTGTGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HWYKGYLSGVSR*CVCACVRVSLG
Trigger: TCCCAGGGACACACGCACGCACGCACACACGCACAACCTGCTCACTCCAGAAAGGTAACCTTTGTACCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
CDS-3UTR CCA 90 bp GTGGCCGGTGATAGCGATAGTGCACAGGTAAAAAGGCCTGGAAGCAGTCGATGCAGGAGAATAAGCAGTTaGGAGACGCTTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VAGDSDSAQVKRPGSSRCRRISS*ETLEGP
Trigger: AGGACCCTCAAGCGTCTCCCAACTGCTTATTCTCCT...GCATCGACTGCTTCCAGGCCTTTTTACCTGTGCACTATCGCTATCACCGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147003.8
3UTR CAA 72 bp GGAAACTCTTGGTCACAGTACATCAGTAAGTCGGGGTaGTTGACCACAATGAGGGTGTCTCCATCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: GNSWSQYISKSG*LTTMRVSPSFL
Trigger: TAAGAAAGATGGAGACACCCTCATTGTGGTCAACAACCCCGACTTACTGATGTACTGTGACCAAGAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147003.8
CDS-3UTR CCA 90 bp GTCGATGCACTGTGCATCCTGCCGGGCATAAATGAGGACTGCAGATTCATTGGATCCATCTTCTGTCTGTaGAAACCATCTTTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: VDALCILPGINEDCRFIGSIFCL*KPSFKN
Trigger: ATTTTTGAAAGATGGTTTCCACAGACAGAAGATGGA...TCCAATGAATCTGCAGTCCTCATTTATGCCCGGCAGGATGCACAGTGCATCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000133584.8
3UTR CAA 72 bp AACTCTTGGTCACAGTACATCAGTAAGTCGGGGTTGTaGACCACAATGAGGGTGTCTCCATCTTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: NSWSQYISKSGL*TTMRVSPSFLC
Trigger: ACATAAGAAAGATGGAGACACCCTCATTGTGGTCAACAACCCCGACTTACTGATGTACTGTGACCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147003.8
CDS-3UTR CCA 90 bp AGTTCCTTTCTCGTAGTGAAGCCAACTCATAGGGATCCACAAAGAGTCCTGGTGTCCATCTTCTGTCTGTaGAAACCATCTTTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SSFLVVKPTHRDPQRVLVSIFCL*KPSFKN
Trigger: ATTTTTGAAAGATGGTTTCCACAGACAGAAGATGGA...CACCAGGACTCTTTGTGGATCCCTATGAGTTGGCTTCACTACGAGAAAGGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133584.8
ENSMUST00000136643.2
CDS-3UTR CCA 90 bp AAAGTAGAACACAGAATCGTAATGAGCAGCGTCACAGAACACACTAAAGAGGTAATCCACAAAGAGTCCTaGTGGAATGTAATGCTTAAT +
Preference number: 4 (lower is better)
Translates to: KVEHRIVMSSVTEHTKEVIHKES*WNVMLN
Trigger: ATTAAGCATTACATTCCACCAGGACTCTTTGTGGAT...TACCTCTTTAGTGTGTTCTGTGACGCTGCTCATTACGATTCTGTGTTCTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147688.8
3UTR CAA 72 bp TATCTTTCTACTGATGCAGCTTCTTTTGAGTTATCCTaGCTTCTAGTAAGTAGCCCCTCACCCATATTTCTA +
Preference number: 4 (lower is better)
Translates to: YLSTDAASFELS*LLVSSPSPIFL
Trigger: TAGAAATATGGGTGAGGGGCTACTTACTAGAAGCAAGGATAACTCAAAAGAAGCTGCATCAGTAGAAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000144216.2
CDS-3UTR CAA 90 bp GTAGTGAAGCCAACTCATAGGGATCCACAAAGAGTCCTGGTGGAATGTAATGCTAAAGCGAGTCAACAGTaGCTGGGGGCAAACAGCGCT +
Preference number: 5 (lower is better)
Translates to: VVKPTHRDPQRVLVECNAKASQQ*LGANSA
Trigger: AGCGCTGTTTGCCCCCAGCAACTGTTGACTCGCTTT...AGCATTACATTCCACCAGGACTCTTTGTGGATCCCTATGAGTTGGCTTCACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147003.8