Pregenerated sensors for PIGU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038383Ensembl transcript IDs: ENSMUST00000077626.13, ENSMUST00000165234.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAGTCCCCCTCTTGTCCATaGAGCGCTGTGCCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LDLNFFCLRTRLLATLDESPSCP*SAVPAR Trigger: CCTGGCTGGCACAGCGCTGCATGGACAAGAGGGGGA...CTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAGACCTGGCCCAGCTTCTaGCCCTTCCCCCTCTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LDLNFFCLRTRLLATLDETWPSF*PFPLLS Trigger: GGACAAGAGGGGGAAGGGCCAGAAGCTGGGCCAGGT...CTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTGTGACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCCCCCTCTTGTCCATaGAGCGCTGTGCCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ICDPGLELLLPEDAPAGNSPSCP*SAVPAR Trigger: CCTGGCTGGCACAGCGCTGCATGGACAAGAGGGGGA...GTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGTCACAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTGCTGGCAACTCTGGATaGGGGACCTGGCCCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: FSPWALLPAMSPLWCQRFAGNSG*GTWPSF Trigger: GAAGCTGGGCCAGGTCCCTCATCCAGAGTTGCCAGC...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTATAAAGCCCTGCTCACCGGCTGCTTCCTTTCTGTGCACAGTCACAAAGTGACCTGGCCCAGCTTCTaGCCCTTCCCCCTCTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TYKALLTGCFLSVHSHKVTWPSF*PFPLLS Trigger: GGACAAGAGGGGGAAGGGCCAGAAGCTGGGCCAGGT...CACTTTGTGACTGTGCACAGAAAGGAAGCAGCCGGTGAGCAGGGCTTTATAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTGACTTGAACTTCTTCTaGCTGAGGACGCGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: FSPWALLPAMSPLWCQRFDLNFF*LRTRLL Trigger: CAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTC...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR GCA 72 bp | TGCCAGAGATTTGTGACCCTGGACTTGAACTTCTTCTaGCTGAGGACGCGCCTGCTGGCAACTCTGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: CQRFVTLDLNFF*LRTRLLATLDE Trigger: CTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGTCACAAATCTCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR CCA 72 bp | TCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTaGTGCCAGAGATTTGTGACCCTGGACTTGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPWALLPAMSPL*CQRFVTLDLNF Trigger: GAAGTTCAAGTCCAGGGTCACAAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTATAAAGCCCTGCTCACCGGCTGCTTCCTTTCTGTGCACAGTCACAAAGTGTTTGTGACCCTGGACTaGAACTTCTTCTGCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TYKALLTGCFLSVHSHKVFVTLD*NFFCLR Trigger: CCTCAGGCAGAAGAAGTTCAAGTCCAGGGTCACAAA...CACTTTGTGACTGTGCACAGAAAGGAAGCAGCCGGTGAGCAGGGCTTTATAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCTTCTGGCCCTTCCCCCTCTTGTCCATGCAGCGCTGTGCCAGCCAGGCCTCAGTGCCGTCCTTaGCAGTCAAGTAGAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GPASGPSPSCPCSAVPARPQCRP*QSSRGR Trigger: ACGGCCTCTACTTGACTGCCAAGGACGGCACTGAGG...CCTGGCTGGCACAGCGCTGCATGGACAAGAGGGGGAAGGGCCAGAAGCTGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR GCA 90 bp | GGCCCAGCTTCTGGCCCTTCCCCCTCTTGTCCATGCAGCGCTGTGCCAGCCAGGCAAGCATGGCCTCAGTaGCGTCCTTGGCAGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GPASGPSPSCPCSAVPARQAWPQ*RPWQSS Trigger: ACTTGACTGCCAAGGACGGCACTGAGGCCATGCTTG...CCTGGCTGGCACAGCGCTGCATGGACAAGAGGGGGAAGGGCCAGAAGCTGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | GACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAGGGACTGGGGCAAACAGGGTaGCTGGGTACAGAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLNFFCLRTRLLATLDEGLGQTG*LGTETG Trigger: ACCAGTCTCTGTACCCAGTCACCCTGTTTGCCCCAG...TCCCTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | CTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAGAGTAGAGGCCGTGTGTaGGGTAATACTCCCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LDLNFFCLRTRLLATLDESRGRV*GNTPAA Trigger: TGCGGCGGGAGTATTACCTCACACACGGCCTCTACT...CTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | GTGCCAGAGATTTGTGACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTAGTAGAGGCCGTGTGTaGGGTAATACTCCCGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPEICDPGLELLLPEDAPSRGRV*GNTPAA Trigger: TGCGGCGGGAGTATTACCTCACACACGGCCTCTACT...AGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGTCACAAATCTCTGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTCTGGGGCAAACAGGGTaGCTGGGTACAGAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPWALLPAMSPLWCQRFLGQTG*LGTETG Trigger: ACCAGTCTCTGTACCCAGTCACCCTGTTTGCCCCAG...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| 3UTR CAA 72 bp | CTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTaGGTGCCAGAGATTTGTGACCCTGGACTTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LPMGLVASYESP*VPEICDPGLEL Trigger: AAGTTCAAGTCCAGGGTCACAAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR GCA 90 bp | GACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAGGGAGAGATGAGCAGGATCTaGCCAACATTGAAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLNFFCLRTRLLATLDEGEMSRI*PTLKVS Trigger: ACTGACCTTCAATGTTGGGCAGATCCTGCTCATCTC...TCCCTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | ACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGACCAATGTTTGGAGTaGGATCTGGAACAGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLDLNFFCLRTRLLATLDDQCLE*DLEQRV Trigger: TACTCTCTGTTCCAGATCTCACTCCAAACATTGGTC...ATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | ACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATTGTAGAAGAAGACGTTaGTCTGAAACACGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: TLDLNFFCLRTRLLATLDCRRRR*SETRRQ Trigger: TTGTCTGCGTGTTTCAGATCAACGTCTTCTTCTACA...ATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTAGAAGTAGTCAGAGATaGGCAGGATCTGCCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FSPWALLPAMSPLWCQRFRSSQR*AGSAQH Trigger: ATGTTGGGCAGATCCTGCTCATCTCTGACTACTTCT...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR GCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTGAGATGAGCAGGATCTaGCCAACATTGAAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPWALLPAMSPLWCQRFEMSRI*PTLKVS Trigger: ACTGACCTTCAATGTTGGGCAGATCCTGCTCATCTC...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CCA 90 bp | CTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAGGTTTGGAGTGAGATCTaGAACAGAGAGTATGAAACC | + |
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Preference number: 4 (lower is better) Translates to: LDLNFFCLRTRLLATLDEVWSEI*NREYET Trigger: GGTTTCATACTCTCTGTTCCAGATCTCACTCCAAAC...CTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | ACCTATAAAGCCCTGCTCACCGGCTGCTTCCTTTCTGTGCACAGTCACAAAGTGAGAAGTAGTCAGAGATaGGCAGGATCTGCCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TYKALLTGCFLSVHSHKVRSSQR*AGSAQH Trigger: ATGTTGGGCAGATCCTGCTCATCTCTGACTACTTCT...CACTTTGTGACTGTGCACAGAAAGGAAGCAGCCGGTGAGCAGGGCTTTATAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR GCA 90 bp | GACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAGGGAAGTTTCGTGAAATACTaGTCCAGAATATGGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: DLNFFCLRTRLLATLDEGSFVKY*SRIWRH Trigger: GTGTCTCCATATTCTGGAGCAGTATTTCACGAAACT...TCCCTCATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CCA 90 bp | ACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATGAAAAGACCAATGTTTaGAGTGAGATCTGGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: TLDLNFFCLRTRLLATLDEKTNV*SEIWNR Trigger: TCTGTTCCAGATCTCACTCCAAACATTGGTCTTTTC...ATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTTGTAGAAGAAGACGTTaGTCTGAAACACGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: FSPWALLPAMSPLWCQRFCRRRR*SETRRQ Trigger: TTGTCTGCGTGTTTCAGATCAACGTCTTCTTCTACA...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTGTTTGGAGTGAGATCTaGAACAGAGAGTATGAAACC | + |
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Preference number: 4 (lower is better) Translates to: FSPWALLPAMSPLWCQRFVWSEI*NREYET Trigger: GGTTTCATACTCTCTGTTCCAGATCTCACTCCAAAC...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR GCA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTAGTTTCGTGAAATACTaGTCCAGAATATGGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: FSPWALLPAMSPLWCQRFSFVKY*SRIWRH Trigger: GTGTCTCCATATTCTGGAGCAGTATTTCACGAAACT...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CCA 90 bp | ACCTATAAAGCCCTGCTCACCGGCTGCTTCCTTTCTGTGCACAGTCACAAAGTGGAAAAGACCAATGTTTaGAGTGAGATCTGGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: TYKALLTGCFLSVHSHKVEKTNV*SEIWNR Trigger: TCTGTTCCAGATCTCACTCCAAACATTGGTCTTTTC...CACTTTGTGACTGTGCACAGAAAGGAAGCAGCCGGTGAGCAGGGCTTTATAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | GGCCCAGCTTCTGGCCCTTCCCCCTCTTGTCCATGCAGCGCTGTGCCAGCCAGGAGGATCTGCCCAACATaGAAGGTCAGTGTGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: GPASGPSPSCPCSAVPARRICPT*KVSVMA Trigger: TGCCATCACACTGACCTTCAATGTTGGGCAGATCCT...CCTGGCTGGCACAGCGCTGCATGGACAAGAGGGGGAAGGGCCAGAAGCTGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | GGCCCAGCTTCTGGCCCTTCCCCCTCTTGTCCATGCAGCGCTGTGCCAGCCAGGAAGATCCAGAAGGCTTaGCTCTTCACTTTAACAGGG | + |
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Preference number: 5 (lower is better) Translates to: GPASGPSPSCPCSAVPARKIQKA*LFTLTG Trigger: CCCTGTTAAAGTGAAGAGCAAAGCCTTCTGGATCTT...CCTGGCTGGCACAGCGCTGCATGGACAAGAGGGGGAAGGGCCAGAAGCTGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS TCA 90 bp | GCATGGCCTCAGTGCCGTCCTTGGCAGTCAAGTAGAGGCCGTGTGTaGGGTAATACTCCCGCCGCAGGAAGGCATAGAAGTAGTCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AWPQCRPWQSSRGRV*GNTPAAGRHRSSQR Trigger: TCTCTGACTACTTCTATGCCTTCCTGCGGCGGGAGTATTACCTCACACACGGCCTCTACTTGACTGCCAAGGACGGCACTGAGGCCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | GTGCCAGAGATTTGTGACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCAATGAGGGTGTTGTaGATGGCGCAGGTAGACTTG | + |
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Preference number: 5 (lower is better) Translates to: VPEICDPGLELLLPEDAPAMRVL*MAQVDL Trigger: CAAGTCTACCTGCGCCATCAACAACACCCTCATTGC...AGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGTCACAAATCTCTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | ACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACTCTGGATAGGATCTGCCCAACATaGAAGGTCAGTGTGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: TLDLNFFCLRTRLLATLDRICPT*KVSVMA Trigger: TGCCATCACACTGACCTTCAATGTTGGGCAGATCCT...ATCCAGAGTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTATGGCGCAGGTAGACTaGGCAACACAAGACAAGATC | + |
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Preference number: 5 (lower is better) Translates to: FSPWALLPAMSPLWCQRFMAQVD*ATQDKI Trigger: GATCTTGTCTTGTGTTGCCAAGTCTACCTGCGCCAT...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | ACCTATAAAGCCCTGCTCACCGGCTGCTTCCTTTCTGTGCACAGTCACAAAGTGGCAATGAGGGTGTTGTaGATGGCGCAGGTAGACTTG | + |
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Preference number: 5 (lower is better) Translates to: TYKALLTGCFLSVHSHKVAMRVL*MAQVDL Trigger: CAAGTCTACCTGCGCCATCAACAACACCCTCATTGC...CACTTTGTGACTGTGCACAGAAAGGAAGCAGCCGGTGAGCAGGGCTTTATAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | ACCTATAAAGCCCTGCTCACCGGCTGCTTCCTTTCTGTGCACAGTCACAAAGTGATGGCGCAGGTAGACTaGGCAACACAAGACAAGATC | + |
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Preference number: 5 (lower is better) Translates to: TYKALLTGCFLSVHSHKVMAQVD*ATQDKI Trigger: GATCTTGTCTTGTGTTGCCAAGTCTACCTGCGCCAT...CACTTTGTGACTGTGCACAGAAAGGAAGCAGCCGGTGAGCAGGGCTTTATAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | ATTTGTGACCCTGGACTTGAACTTCTTCTGCCTGAGGACGCGCCTGCTGGCAACGGATGCTCCTTTAATTaGATGGCTAATGGAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: ICDPGLELLLPEDAPAGNGCSFN*MANGTV Trigger: CACAGTTCCATTAGCCATCAAATTAAAGGAGCATCC...GTTGCCAGCAGGCGCGTCCTCAGGCAGAAGAAGTTCAAGTCCAGGGTCACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS CCA 90 bp | AGAAAGAGAGGCAAACTATCACCACCAGGCTTCCTGTGTACATCATaGCGTACTCCCACGAGAAGATCCAGAAGGCTTTGCTCTTCACTT | + |
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Preference number: 5 (lower is better) Translates to: RKRGKLSPPGFLCTS*RTPTRRSRRLCSSL Trigger: AAGTGAAGAGCAAAGCCTTCTGGATCTTCTCGTGGGAGTACGCCATGATGTACACAGGAAGCCTGGTGGTGATAGTTTGCCTCTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCCCATGGGCCTTGTTGCCAGCTATGAGTCCCCTTTGGTGCCAGAGATTTGGATGCTCCTTTAATTaGATGGCTAATGGAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: FSPWALLPAMSPLWCQRFGCSFN*MANGTV Trigger: CACAGTTCCATTAGCCATCAAATTAAAGGAGCATCC...AAATCTCTGGCACCAAAGGGGACTCATAGCTGGCAACAAGGCCCATGGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS TCA 72 bp | CAGTGCCGTCCTTGGCAGTCAAGTAGAGGCCGTGTGTaGGGTAATACTCCCGCCGCAGGAAGGCATAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: QCRPWQSSRGRV*GNTPAAGRHRS Trigger: ACTTCTATGCCTTCCTGCGGCGGGAGTATTACCTCACACACGGCCTCTACTTGACTGCCAAGGACGGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS CCA 72 bp | GGCAAACTATCACCACCAGGCTTCCTGTGTACATCATaGCGTACTCCCACGAGAAGATCCAGAAGGCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GKLSPPGFLCTS*RTPTRRSRRLC Trigger: GCAAAGCCTTCTGGATCTTCTCGTGGGAGTACGCCATGATGTACACAGGAAGCCTGGTGGTGATAGTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS CAA 72 bp | ATCATGGCGTACTCCCACGAGAAGATCCAGAAGGCTTaGCTCTTCACTTTAACAGGGATGTACTGCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IMAYSHEKIQKA*LFTLTGMYCRW Trigger: CCAGCGGCAGTACATCCCTGTTAAAGTGAAGAGCAAAGCCTTCTGGATCTTCTCGTGGGAGTACGCCATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS CCA 72 bp | GAAGAAAGCCATGTAGAGGGCCACATCCCCCACAGTTaGATAGGACTTGAAGATAGAGATGATGGCAATCTG | + |
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Preference number: 6 (lower is better) Translates to: EESHVEGHIPHS*IGLEDRDDGNL Trigger: CAGATTGCCATCATCTCTATCTTCAAGTCCTATCCAACTGTGGGGGATGTGGCCCTCTACATGGCTTTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS CAA 90 bp | ACGCTGCCTTTTATTGTGGTCAAAATGAAGAAAGCAATGAGGGTGTaGTTGATGGCGCAGGTAGACTTGGCAACACAAGACAAGATCGTG | + |
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Preference number: 6 (lower is better) Translates to: TLPFIVVKMKKAMRV*LMAQVDLATQDKIV Trigger: CACGATCTTGTCTTGTGTTGCCAAGTCTACCTGCGCCATCAACAACACCCTCATTGCTTTCTTCATTTTGACCACAATAAAAGGCAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS CCA 72 bp | GAAGTACCAGAAAAGACCAATGTTTGGAGTGAGATCTaGAACAGAGAGTATGAAACCATAGACTGCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: EVPEKTNVWSEI*NREYETIDCRD Trigger: ATCCCTGCAGTCTATGGTTTCATACTCTCTGTTCCAGATCTCACTCCAAACATTGGTCTTTTCTGGTACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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| CDS CAA 72 bp | TTTATTGTGGTCAAAATGAAGAAAGCAATGAGGGTGTaGTTGATGGCGCAGGTAGACTTGGCAACACAAGAC | + |
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Preference number: 6 (lower is better) Translates to: FIVVKMKKAMRV*LMAQVDLATQD Trigger: GTCTTGTGTTGCCAAGTCTACCTGCGCCATCAACAACACCCTCATTGCTTTCTTCATTTTGACCACAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077626.13 ENSMUST00000165234.2 |
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