Pregenerated sensors for PIGT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017721Ensembl transcript IDs: ENSMUST00000103101.11, ENSMUST00000117066.8, ENSMUST00000152522.8
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTGCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTGCTaGGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCG | + |
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Preference number: 1 (lower is better) Translates to: ALPCSLGSDECSCSC*GKGGLERGHTTGSP Trigger: CGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCCCAGCAACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR TCA 90 bp | TGGCCAGGCCGCCCGACTTGGGCTCTTCGATGTGAAAGGTTCGGGTaGGGAGATTGTAGAAGGAGCCATAGCACACGGCCACCACCGTGC | + |
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Preference number: 1 (lower is better) Translates to: WPGRPTWALRCERFG*GDCRRSHSTRPPPC Trigger: GCACGGTGGTGGCCGTGTGCTATGGCTCCTTCTACAATCTCCTCACCCGAACCTTTCACATCGAAGAGCCCAAGTCGGGCGGCCTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR GCA 90 bp | AAGCTAACTCTGGAGACACAGCGGGTGGCAGAAAAAGCCCTGCCCTaGTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTGCTGGGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: KLTLETQRVAEKALP*SLGSDECSCSCWGK Trigger: CTTTCCCCAGCAACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGCCACCCGCTGTGTCTCCAGAGTTAGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR GCA 90 bp | CAAGGTGTTGAAGAGAGGGCTCCCTTCCCAGTCCACTGGTTTGGCTaGCACCACACTGGGCACAAGGGCGCTGAGGACAGATGGGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: QGVEERAPFPVHWFG*HHTGHKGAEDRWAD Trigger: GTCAGCCCATCTGTCCTCAGCGCCCTTGTGCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGAAGGGAGCCCTCTCTTCAACACCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR GCA 90 bp | GGCGGTGGGAGTGACGGTATTGGTGGCGTCGATGAAGTTGAGGGATaGACAGAAGATCCCCGAGAGGACATTGCTGAGCTCCCTCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GGGSDGIGGVDEVEG*TEDPREDIAELPPG Trigger: TCCTGGAGGGAGCTCAGCAATGTCCTCTCGGGGATCTTCTGTGCATCCCTCAACTTCATCGACGCCACCAATACCGTCACTCCCACCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR CCA 90 bp | GCACGAGCCCCTTGTAGGCAGAAGCACGGCTGCCACAGGAGAGGATaGGAAGGGATTTGGCTCAAGTCTACCACACTGGAAACCACGCCT | + |
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Preference number: 1 (lower is better) Translates to: ARAPCRQKHGCHRRG*EGIWLKSTTLETTP Trigger: AGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATCCTCTCCTGTGGCAGCCGTGCTTCTGCCTACAAGGGGCTCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR CCA 90 bp | TGTAGGCAGAAGCACGGCTGCCACAGGAGAGGATGGGAAGGGATTTaGCTCAAGTCTACCACACTGGAAACCACGCCTTGGCCCAGACCA | + |
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Preference number: 1 (lower is better) Translates to: CRQKHGCHRRGWEGI*LKSTTLETTPWPRP Trigger: TGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATCCTCTCCTGTGGCAGCCGTGCTTCTGCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR TCA 90 bp | CCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATaGAGCACAAGAATGTGCTTAGGGGCTCAGGAGGAGACACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: PVSPGPIHSLSESLS*STRMCLGAQEETLG Trigger: CCCCAGTGTCTCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| 3UTR GCA 90 bp | GATGCTGGTACAGTGAGCATTTCTGCAGATAGGCCGGATGTGCACTaGCTGGGAGTGGTAACTGGTGTGGAACAAGCGGTCTGCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: DAGTVSISADRPDVH*LGVVTGVEQAVCFQ Trigger: TTGAAAGCAGACCGCTTGTTCCACACCAGTTACCACTCCCAGGCAGTGCACATCCGGCCTATCTGCAGAAATGCTCACTGTACCAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR TCA 90 bp | TGTCAAACAAGTCATAGACGGCATAGGTCTTCCTGGTGCCCAAAATaGCATCCTGGTATGTGGAAGTTGGGGGAGGGCTCACCTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: CQTSHRRHRSSWCPK*HPGMWKLGEGSPPV Trigger: CACTGGAGGTGAGCCCTCCCCCAACTTCCACATACCAGGATGTCATTTTGGGCACCAGGAAGACCTATGCCGTCTATGACTTGTTTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR CCA 90 bp | GGCACGGGTAGGGCCTCATTATCTGGGGGTCTCTTCCATTTGAGCTaGATGTTGAGGTTTCGAGAGTTATTGATCATGGCTGTGTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: GTGRASLSGGLFHLS*MLRFRELLIMAVSN Trigger: GTTTGACACAGCCATGATCAATAACTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAGACCCCCAGATAATGAGGCCCTACCCGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAAAAAGCCCTGCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTGCCTCGGGTCGGACGAGTaGAGCTGCAGTTGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: AEKALPCSLGSDECSCSCLGSDE*SCSCWG Trigger: TCCCCAGCAACTGCAGCTGCACTCGTCCGACCCGAG...GCAACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTTCCCAGTCCACTGGTTTGGCTGCCACCACACTGGGCACAAGGGCGCTGTGGCAGAAAAAGCCCTaGCCTGCTCCCTCGGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: LPSQSTGLAATTLGTRALWQKKP*PAPSGR Trigger: CCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGCCA...CAGCGCCCTTGTGCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGAAGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCTGGCTGGCAGCTGAATaGGCATCTCCAGGAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: HPTPKQHHSSTAPIAWAIWLAAE*ASPGGG Trigger: CCCACCTCCTGGAGATGCTCATTCAGCTGCCAGCCA...GATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCACGGGCTCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTACAAGAGCTTCTTCCATaGCGTGAGGTTCTCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: TPRARRTREGAHHGRAGLQELLP*REVLSA Trigger: TGCACTGAGAACCTCACGCCATGGAAGAAGCTCTTG...TAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGAGCCCGTGGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACGAGGGCTCGTTCAAACTaGATGGAGACCTTGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: TREGAHHGRAGLERGHTTRARSN*METLVT Trigger: CGTCACCAAGGTCTCCATCCAGTTTGAACGAGCCCT...CGTGGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGCCGAGAGGACATTGCTaGGCTCCCTCCAGGACTTAT | + |
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Preference number: 2 (lower is better) Translates to: GKGRTREGAHHGLAGLERPRGHC*APSRTY Trigger: ATAAGTCCTGGAGGGAGCTCAGCAATGTCCTCTCGG...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR CAA 90 bp | GGGAACAAGGTGTTGAAGAGAGGGCTCCCTTCCCAGTCCACTGGTTaGGCTGCCACCACACTGGGCACAAGGGCGCTGAGGACAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: GNKVLKRGLPSQSTG*AATTLGTRALRTDG Trigger: CCCATCTGTCCTCAGCGCCCTTGTGCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGAAGGGAGCCCTCTCTTCAACACCTTGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAAGTCTACCACACTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGACTCGGGTCGGACGAGTaGAGCTGCAGTTGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LKSTTLETTPWPRPAPEGLGSDE*SCSCWG Trigger: TCCCCAGCAACTGCAGCTGCACTCGTCCGACCCGAG...TCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCTGTGTAGAGTCGGACAAAGTAGCTGGAGCCATCAGACACCGGGAACAAAGGAGGCGGTGGGAGTaGCGGTATTGGTGGCGTCGA | + |
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Preference number: 2 (lower is better) Translates to: GLCVESDKVAGAIRHREQRRRWE*RYWWRR Trigger: TCGACGCCACCAATACCGTCACTCCCACCGCCTCCT...TTGTTCCCGGTGTCTGATGGCTCCAGCTACTTTGTCCGACTCTACACAGAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAAGACGGAACGTACCGCTGCGCATaGAGGAAGGGCACGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: HSSTAPIAWAIRMSSKDGTYRCA*RKGTGR Trigger: CCTACCCGTGCCCTTCCTGCATGCGCAGCGGTACGT...TCCGTCTTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR CAA 90 bp | TTGGCCAGTCCCAGAGGTTTGAAGGAGGCGGTGGGAGTGACGGTATaGGTGGCGTCGATGAAGTTGAGGGATGCACAGAAGATCCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LASPRGLKEAVGVTV*VASMKLRDAQKIPE Trigger: CTCGGGGATCTTCTGTGCATCCCTCAACTTCATCGACGCCACCAATACCGTCACTCCCACCGCCTCCTTCAAACCTCTGGGACTGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGAAAAAGCCCTGCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTTCAGCTCCCAGGAGATaGTGGTACAGTGAGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: WQKKPCPAPSGRTSAAAVSAPRR*WYSEHF Trigger: GAAATGCTCACTGTACCAGCATCTCCTGGGAGCTGA...AACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACGGTAGTGGATGTAACTTaGTTTATTCTCCTTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TREGAHHGRAGLERGHTTVVDVT*FILLAL Trigger: AAGGGCAAGGAGAATAAACCAAGTTACATCCACTAC...CGTGGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGCAGCACGGGGAAGGCCCGATAAGGATGGGAGTTGTACAGCAGAGTACGCTCCCAGGAGATGCTaGTACAGTGAGCATTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PAAARGRPDKDGSCTAEYAPRRC*YSEHFC Trigger: GCAGAAATGCTCACTGTACCAGCATCTCCTGGGAGC...GTACTCTGCTGTACAACTCCCATCCTTATCGGGCCTTCCCCGTGCTGCTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGAAAGGTTCGGGTGAGGAGATTGTAGAAGGAGCCATAGCACACGGCCACAGGCAGAAGCACGGCTaGCACAGGAGAGGATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: DVKGSGEEIVEGAIAHGHRQKHG*HRRGWE Trigger: TTCCCATCCTCTCCTGTGGCAGCCGTGCTTCTGCCT...GTGGCCGTGTGCTATGGCTCCTTCTACAATCTCCTCACCCGAACCTTTCACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCACTCAGGAGGAGACACTaGGGACACACAAGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PPSHLPQPVSPGPIHSLSLRRRH*GHTRLL Trigger: CAGCAGCCTTGTGTGTCCCCAGTGTCTCCTCCTGAG...TGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTGAAAGGTTCGGGTGAGGAGATTGTAGAAGGAGCCATAGCACACGGCCACCCCTTCCCAGTCCACTaGTTTGGCTGCCACCACACT | + |
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Preference number: 2 (lower is better) Translates to: DVKGSGEEIVEGAIAHGHPFPVH*FGCHHT Trigger: AGTGTGGTGGCAGCCAAACCAGTGGACTGGGAAGGG...GTGGCCGTGTGCTATGGCTCCTTCTACAATCTCCTCACCCGAACCTTTCACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | GAATGTCCAGTAAAGACGGAAGCATCGCTAGGCTGTCCGGTATACTGCAGCACGGAGTGCAGCTGCAGTTaGTGGGGAAAGGGAGGACTA | + |
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Preference number: 2 (lower is better) Translates to: ECPVKTEASLGCPVYCSTECSCS*WGKGGL Trigger: TAGTCCTCCCTTTCCCCAGCAACTGCAGCTGCACTC...CGTGCTGCAGTATACCGGACAGCCTAGCGATGCTTCCGTCTTTACTGGACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCCGGGGTGGGCAGGTTCACTAGCAAGGGCTCTGTGTAGAGTCGGACAAAGTGATGAAGTTGAGGGATaGACAGAAGATCCCCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SPGWAGSLARALCRVGQSDEVEG*TEDPRE Trigger: CTCTCGGGGATCTTCTGTGCATCCCTCAACTTCATC...ACTTTGTCCGACTCTACACAGAGCCCTTGCTAGTGAACCTGCCCACCCCGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR CAA 90 bp | GCGTCGATGAAGTTGAGGGATGCACAGAAGATCCCCGAGAGGACATaGCTGAGCTCCCTCCAGGACTTATCCACACTCAGACTTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASMKLRDAQKIPERT*LSSLQDLSTLRLGS Trigger: ACTTCCAAGTCTGAGTGTGGATAAGTCCTGGAGGGAGCTCAGCAATGTCCTCTCGGGGATCTTCTGTGCATCCCTCAACTTCATCGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTAGCAAGGGCTCTGTGTAGAGTCGGACAAAGTAGCTGGAGCCATCAGACATGCAGCTGCAGTTGCTaGGGAAAGGGAGGACTAGAG | + |
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Preference number: 2 (lower is better) Translates to: SLARALCRVGQSSWSHQTCSCSC*GKGGLE Trigger: CTCTAGTCCTCCCTTTCCCCAGCAACTGCAGCTGCA...TGTCTGATGGCTCCAGCTACTTTGTCCGACTCTACACAGAGCCCTTGCTAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGACCCCTCTTTCCCACCTaGACAGGCCCTCAGGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGPLFPT*TGPQVY Trigger: GTAAACCTGAGGGCCTGTGCAGGTGGGAAAGAGGGG...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| 3UTR-3UTR GCA 90 bp | TCACTAGCAAGGGCTCTGTGTAGAGTCGGACAAAGTAGCTGGAGCCATCAGACAGTAATGGTGAGCGTGTaGACATACAGCCGCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SLARALCRVGQSSWSHQTVMVSV*TYSRRY Trigger: GTACCTGCGGCTGTATGTGCACACGCTCACCATTAC...TGTCTGATGGCTCCAGCTACTTTGTCCGACTCTACACAGAGCCCTTGCTAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR CAA 90 bp | AGGAAGGGCACGGGTAGGGCCTCATTATCTGGGGGTCTCTTCCATTaGAGCTGGATGTTGAGGTTTCGAGAGTTATTGATCATGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RKGTGRASLSGGLFH*SWMLRFRELLIMAV Trigger: CACAGCCATGATCAATAACTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAGACCCCCAGATAATGAGGCCCTACCCGTGCCCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCTATCCACACTCAGACTTaGAAGTTTTCAGGAGACGAT | + |
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Preference number: 2 (lower is better) Translates to: WKPRLGPDQLQRELASKAIHTQT*KFSGDD Trigger: ATCGTCTCCTGAAAACTTCCAAGTCTGAGTGTGGAT...AGCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR GCA 90 bp | GTTATTGATCATGGCTGTGTCAAACAAGTCATAGACGGCATAGGTCTTCCTGGTACAACCGAAAGGGTCTaGCTCAGCTCCCAGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: VIDHGCVKQVIDGIGLPGTTERV*LSSQEM Trigger: CATCTCCTGGGAGCTGAGGCAGACCCTTTCGGTTGT...ACCAGGAAGACCTATGCCGTCTATGACTTGTTTGACACAGCCATGATCAATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGACCCTCAGGTTTACTTTaGAAACTGTTGAGAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLSSSTTCFSWANPLSLRPSGLL*KLLRSE Trigger: CTCACTTCTCAACAGTTTCCAAAGTAAACCTGAGGG...TCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| 3UTR CAA 90 bp | GGTAGGGCCTCATTATCTGGGGGTCTCTTCCATTTGAGCTGGATGTaGAGGTTTCGAGAGTTATTGATCATGGCTGTGTCAAACAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: GRASLSGGLFHLSWM*RFRELLIMAVSNKS Trigger: TGACTTGTTTGACACAGCCATGATCAATAACTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAGACCCCCAGATAATGAGGCCCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAAGAAAGTGAAGAAACTCCACACCCCACTTCTACCTCCCTCTCATCTTCCATCAGAGTCTTTGTCATaGAGCACAAGAATGTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: PKKVKKLHTPLLPPSHLPSESLS*STRMCL Trigger: TAAGCACATTCTTGTGCTTCATGACAAAGACTCTGA...TGGAAGATGAGAGGGAGGTAGAAGTGGGGTGTGGAGTTTCTTCACTTTCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| 3UTR-3UTR CAA 90 bp | CGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACTGGAAACCACGCCTaGGCCCAGACCAGCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RTREGAHHGRAGLERGHTTGNHA*AQTSSR Trigger: TCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGT...GGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR GCA 72 bp | CCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTaGTGGGGAAAGGGAGGACTAGAGAGGGGGCACACC | + |
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Preference number: 3 (lower is better) Translates to: PCSLGSDECSCS*WGKGGLERGHT Trigger: GGTGTGCCCCCTCTCTAGTCCTCCCTTTCCCCAGCAACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR CCA 72 bp | TGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTGCTaGGGAAAGGGAGGACTAGAGAGGGGGCACACCACG | + |
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Preference number: 3 (lower is better) Translates to: CSLGSDECSCSC*GKGGLERGHTT Trigger: CGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCCCAGCAACTGCAGCTGCACTCGTCCGACCCGAGGGAGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGAAAAAGCCCTGCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTGCACTGGAAACCACGCCTaGGCCCAGACCAGCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: AEKALPCSLGSDECSCSCTGNHA*AQTSSR Trigger: TCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGT...GCAACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR-3UTR CAA 90 bp | CACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCGCTCTACTGCGCCCATaGCCTGGGCCATCAGAATGT | + |
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Preference number: 3 (lower is better) Translates to: HPTPKQHHSSTAPIAWAIALLRP*PGPSEC Trigger: ACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGC...GATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| 3UTR GCA 72 bp | GAAGAGAGGGCTCCCTTCCCAGTCCACTGGTTTGGCTaGCACCACACTGGGCACAAGGGCGCTGAGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: EERAPFPVHWFG*HHTGHKGAEDR Trigger: TCTGTCCTCAGCGCCCTTGTGCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGAAGGGAGCCCTCTCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR TCA 72 bp | TGGATGGAGACCTTGGTGACGGAGTTGGCTGGCAGCTaGATGAGCATCTCCAGGAGGTGGGGCTGCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WMETLVTELAGS*MSISRRWGCCL Trigger: CAGGCAGCAGCCCCACCTCCTGGAGATGCTCATTCAGCTGCCAGCCAACTCCGTCACCAAGGTCTCCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR GCA 72 bp | ACTGCAGCACGAGCCCCTTGTAGGCAGAAGCACGGCTaGCACAGGAGAGGATGGGAAGGGATTTGGCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TAARAPCRQKHG*HRRGWEGIWLK Trigger: CTTGAGCCAAATCCCTTCCCATCCTCTCCTGTGGCAGCCGTGCTTCTGCCTACAAGGGGCTCGTGCTGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | ACCGGCCTTGGAACTGCAGGGCAAGAGCTTCTTCCATaGCGTGAGGTTCTCAGTGCAGACAACCTCCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TGLGTAGQELLP*REVLSADNLPR Trigger: CCTCGGGAGGTTGTCTGCACTGAGAACCTCACGCCATGGAAGAAGCTCTTGCCCTGCAGTTCCAAGGCCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGTCCACTGGTTTGGCTGCCACCACACTGGGCACAAGGGCGCTGAGGACAGTGGCGTCGATGAAGTaGAGGGATGCACAGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SQSTGLAATTLGTRALRTVASMK*RDAQKI Trigger: GATCTTCTGTGCATCCCTCAACTTCATCGACGCCAC...TGTCCTCAGCGCCCTTGTGCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCACCTGTCCTGAGCAGGTaGGTAGTGGATGTAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TPPPNSTTALLRPLPGPSPVLSR*VVDVTW Trigger: CCAAGTTACATCCACTACCAACCTGCTCAGGACAGG...TGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAAGACGGATCCCAGTCCACTGGTTaGGCTGCCACCACACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HSSTAPIAWAIRMSSKDGSQSTG*AATTLG Trigger: GCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGA...TCCGTCTTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGAAGGCCCGATAAGGATGGGAGTTGTACAGCAGAGTACTCAGCTCTCCCTGCTCTACTGCGCCCATaGCCTGGGCCATCAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: RGRPDKDGSCTAEYSALPALLRP*PGPSEC Trigger: ACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGC...AGGGAGAGCTGAGTACTCTGCTGTACAACTCCCATCCTTATCGGGCCTTCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAACCTGGTATGTGGAAGTaGGGGGAGGGCTCACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QHHSSTAPIAWAIRMSSKPGMWK*GEGSPP Trigger: TGGAGGTGAGCCCTCCCCCAACTTCCACATACCAGG...TTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGTGAAAGGTTCGGGTGAGGAGATTGTAGAAGGAGCCATAGCACACGGCCACCGAGTGCAGCTGCAGTaGCTGGGGAAAGGGAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: DVKGSGEEIVEGAIAHGHRVQLQ*LGKGRT Trigger: AGTCCTCCCTTTCCCCAGCAACTGCAGCTGCACTCG...GTGGCCGTGTGCTATGGCTCCTTCTACAATCTCCTCACCCGAACCTTTCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTCAAACTGGATGGAGACCTTGGTGACGGAGTTGGCTGGCAGCTGAATGAGACTGAGAGACCGGCCTaGGAACTGCAGGGCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SFKLDGDLGDGVGWQLNETERPA*ELQGKS Trigger: GCTCTTGCCCTGCAGTTCCAAGGCCGGTCTCTCAGT...CTCATTCAGCTGCCAGCCAACTCCGTCACCAAGGTCTCCATCCAGTTTGAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR TCA 72 bp | AAACTAGGCTCTGAGACGCCAATGGACAGGCCTCTGTaGGAGTCCGGGAGAACATGCGGAAGAGGGACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KLGSETPMDRPL*ESGRTCGRGTS Trigger: ACTGGTCCCTCTTCCGCATGTTCTCCCGGACTCTCACAGAGGCCTGTCCATTGGCGTCTCAGAGCCTAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR TCA 72 bp | AGTAGCTGGAGCCATCAGACACCGGGAACAAGGTGTTaGAGAGAGGGCTCCCTTCCCAGTCCACTGGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSWSHQTPGTRC*REGSLPSPLVW Trigger: CCAAACCAGTGGACTGGGAAGGGAGCCCTCTCTTCAACACCTTGTTCCCGGTGTCTGATGGCTCCAGCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR TCA 72 bp | CGCCCGACTTGGGCTCTTCGATGTGAAAGGTTCGGGTaGGGAGATTGTAGAAGGAGCCATAGCACACGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPTWALRCERFG*GDCRRSHSTRP Trigger: TGGCCGTGTGCTATGGCTCCTTCTACAATCTCCTCACCCGAACCTTTCACATCGAAGAGCCCAAGTCGGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | AAGCACGGCTGCCACAGGAGAGGATGGGAAGGGATTTaGCTCAAGTCTACCACACTGGAAACCACGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KHGCHRRGWEGI*LKSTTLETTPW Trigger: CCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATCCTCTCCTGTGGCAGCCGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | GTGTACTCTGTCCACTTGAGCAGGGCTCGTTCAAACTaGATGGAGACCTTGGTGACGGAGTTGGCTGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VYSVHLSRARSN*METLVTELAGS Trigger: GCTGCCAGCCAACTCCGTCACCAAGGTCTCCATCCAGTTTGAACGAGCCCTGCTCAAGTGGACAGAGTACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | GACAGATGGGCTGACATAGAAGCCGTGGTTGGGGTCTaGTGTGTACTCTGTCCACTTGAGCAGGGCTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DRWADIEAVVGV*CVLCPLEQGSF Trigger: GAACGAGCCCTGCTCAAGTGGACAGAGTACACACCAGACCCCAACCACGGCTTCTATGTCAGCCCATCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR GCA 72 bp | ACAGTGAGCATTTCTGCAGATAGGCCGGATGTGCACTaGCTGGGAGTGGTAACTGGTGTGGAACAAGCGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TVSISADRPDVH*LGVVTGVEQAV Trigger: GACCGCTTGTTCCACACCAGTTACCACTCCCAGGCAGTGCACATCCGGCCTATCTGCAGAAATGCTCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | CCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTaGGCCATCAGAATGTCCAGTAAAGACGGAAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: PKQHHSSTAPIA*AIRMSSKDGSI Trigger: GATGCTTCCGTCTTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| 3UTR GCA 72 bp | AGTGACGGTATTGGTGGCGTCGATGAAGTTGAGGGATaGACAGAAGATCCCCGAGAGGACATTGCTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SDGIGGVDEVEG*TEDPREDIAEL Trigger: GAGCTCAGCAATGTCCTCTCGGGGATCTTCTGTGCATCCCTCAACTTCATCGACGCCACCAATACCGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | ATTTGGCTCAAGTCTACCACACTGGAAACCACGCCTTaGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IWLKSTTLETTP*PRPAPEGVSLK Trigger: TTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| 3UTR TCA 72 bp | CCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATaGAGCACAAGAATGTGCTTAGGGGCTCAGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PGPIHSLSESLS*STRMCLGAQEE Trigger: CTCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| 3UTR TCA 72 bp | AGTCATAGACGGCATAGGTCTTCCTGGTGCCCAAAATaGCATCCTGGTATGTGGAAGTTGGGGGAGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SHRRHRSSWCPK*HPGMWKLGEGS Trigger: TGAGCCCTCCCCCAACTTCCACATACCAGGATGTCATTTTGGGCACCAGGAAGACCTATGCCGTCTATGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | CCTGGTGCCCAAAATGACATCCTGGTATGTGGAAGTTaGGGGAGGGCTCACCTCCAGTGTTTCATTATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGAQNDILVCGS*GRAHLQCFIIL Trigger: CAGGATAATGAAACACTGGAGGTGAGCCCTCCCCCAACTTCCACATACCAGGATGTCATTTTGGGCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGCCCTCATTACTTTGGAAACTGTaGAGAAGTGAGTCTGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQFWNLFLTPLSHLHRPSLLWKL*RSESGG Trigger: TCCTCCAGACTCACTTCTCAACAGTTTCCAAAGTAA...TGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTCAAACTGGATGGAGACCTTGGTGACGGAGTTGGCTGGCAGCTGAATGAGAGGTTTCGAGAGTTATaGATCATGGCTGTGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFKLDGDLGDGVGWQLNERFREL*IMAVSN Trigger: GTTTGACACAGCCATGATCAATAACTCTCGAAACCT...CTCATTCAGCTGCCAGCCAACTCCGTCACCAAGGTCTCCATCCAGTTTGAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR TCA 72 bp | TCACCTCCAGTGTTTCATTATCCTGGCTGTAGCCTGTaGTGTCCACATAAACTAGGCTCTGAGACGCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: SPPVFHYPGCSL*CPHKLGSETPM Trigger: CATTGGCGTCTCAGAGCCTAGTTTATGTGGACATCACAGGCTACAGCCAGGATAATGAAACACTGGAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR CCA 72 bp | AGGGCCTCATTATCTGGGGGTCTCTTCCATTTGAGCTaGATGTTGAGGTTTCGAGAGTTATTGATCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RASLSGGLFHLS*MLRFRELLIMA Trigger: AGCCATGATCAATAACTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAGACCCCCAGATAATGAGGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR TCA 72 bp | TGTTATCGAGTCAACTTCTTTAATCTCCCAAGAAAGTaGAGAAACTCCACACCCCACTTCTACCTCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CYRVNFFNLPRK*RNSTPHFYLPL Trigger: GAGAGGGAGGTAGAAGTGGGGTGTGGAGTTTCTTCACTTTCTTGGGAGATTAAAGAAGTTGACTCGATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR TCA 90 bp | GCGCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGAGGAGGCGGTGGGAGTaGCGGTATTGGTGGCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARRTREGAHHGRAGLERGRRRWE*RYWWRR Trigger: TCGACGCCACCAATACCGTCACTCCCACCGCCTCCT...CCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | GCGCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGACGTACCGCTGCGCATaGAGGAAGGGCACGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARRTREGAHHGRAGLERGTYRCA*RKGTGR Trigger: CCTACCCGTGCCCTTCCTGCATGCGCAGCGGTACGT...CCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | GCGCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGCCACTCACGTACCGCTaGGCATGCAGGAAGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ARRTREGAHHGRAGLERGPLTYR*ACRKGT Trigger: CGTGCCCTTCCTGCATGCGCAGCGGTACGTGAGTGG...CCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | CCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGTGCGGAACTGGAATGTaGCGGCCACGTCGCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRARRTREGAHHGRAGLECGTGM*RPRRRK Trigger: CTTCCGGCGACGTGGCCGCCACATTCCAGTTCCGCA...CTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR CCA 90 bp | CCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGCCTGCAGGAAGGGTaGCCCCCAGTATCGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRARRTREGAHHGRAGLESLQEG*PPVSRP Trigger: AGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCT...CTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | CCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGCCGAATCCCAACGCGTaGGGAACTGGAATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRARRTREGAHHGRAGLEPNPNA*GTGMWR Trigger: CCGCCACATTCCAGTTCCGCACGCGTTGGGATTCGG...CTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR CCA 90 bp | ACACCACGGGCTCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAAGCCTGCAGGAAGGGTaGCCCCCAGTATCGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPRARRTREGAHHGRAGLSLQEG*PPVSRP Trigger: AGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCT...TAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGAGCCCGTGGTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCTCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGAGTTGGCTGGCAGCTaGATGAGCATCTCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RARRTREGAHHGRAGLERELAGS*MSISRR Trigger: CCTCCTGGAGATGCTCATTCAGCTGCCAGCCAACTC...CCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGAGCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | ACACCACGGGCTCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTACCCGCAGGGAGTACTTaGAGATCAGCTGTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPRARRTREGAHHGRAGLPAGST*RSAVPG Trigger: CCCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGG...TAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGAGCCCGTGGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| 3UTR CAA 72 bp | GCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTaGCTGGGGAAAGGGAGGACTAGAGAGGGGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLPRVGRVQLQ*LGKGRTREGAH Trigger: GTGTGCCCCCTCTCTAGTCCTCCCTTTCCCCAGCAACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR TCA 90 bp | GCGCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGGAGATGCTGGTACAGTaGGCATTTCTGCAGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARRTREGAHHGRAGLERGEMLVQ*AFLQIG Trigger: GCCTATCTGCAGAAATGCTCACTGTACCAGCATCTC...CCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGCGC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | ACACCACGGGCTCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGCCGTGGTTGGGGTCTaGTGTGTACTCTGTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TPRARRTREGAHHGRAGLAVVGV*CVLCPL Trigger: AAGTGGACAGAGTACACACCAGACCCCAACCACGGC...TAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGAGCCCGTGGTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR TCA 90 bp | GCGCGCCGGACTAGAGAGGGGGTACACCACGGGCTCACAGGACTAGAGAGGGGGTCCAAAAGCCTTGCGTaGACGACAGGTGGAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARRTREGVHHGLTGLERGSKSLA*TTGGAP Trigger: GGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGA...CCCCCTCTCTAGTCCTGTGAGCCCGTGGTGTACCCCCTCTCTAGTCCGGCGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR TCA 90 bp | GTACACCACGGGCTCACAGGACTAGAGAGGGGGTACACCACGGGCACGCCGGACTGGCTGGCAGCTGAATaGGCATCTCCAGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHHGLTGLERGYTTGTPDWLAAE*ASPGGG Trigger: CCCACCTCCTGGAGATGCTCATTCAGCTGCCAGCCA...GTCCGGCGTGCCCGTGGTGTACCCCCTCTCTAGTCCTGTGAGCCCGTGGTGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | GCGCGCCGGACTAGAGAGGGGGTACACCACGGGCTCACAGGACTAGAGAGGGGGAGGCCGGATGTGCACTaGCTGGGAGTGGTAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARRTREGVHHGLTGLERGRPDVH*LGVVTG Trigger: ACCAGTTACCACTCCCAGGCAGTGCACATCCGGCCT...CCCCCTCTCTAGTCCTGTGAGCCCGTGGTGTACCCCCTCTCTAGTCCGGCGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR TCA 90 bp | ACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACGCCTGGCTGTAGCCTGTaGTGTCCACATAAACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TREGAHHGRAGLERGHTTPGCSL*CPHKLG Trigger: GCCTAGTTTATGTGGACATCACAGGCTACAGCCAGG...CGTGGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCGCACCTGACGGAGCCTaGAGGAAGGGTGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LETTPWPRPAPEGVSLKSAPDGA*RKGGPQ Trigger: CTGGGGGCCACCCTTCCTGCAGGCTCCGTCAGGTGC...GCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGGTCCTCCAAAAGCCTTaGGTGAACGACAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGRTREGAHHGLAGLERVLQKP*VNDRWS Trigger: GCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGAC...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGACAACCGAAAGGGTCTaGCTCAGCTCCCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKGRTREGAHHGLAGLERTTERV*LSSQEM Trigger: CATCTCCTGGGAGCTGAGGCAGACCCTTTCGGTTGT...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| 3UTR CAA 72 bp | GTGTTGAAGAGAGGGCTCCCTTCCCAGTCCACTGGTTaGGCTGCCACCACACTGGGCACAAGGGCGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLKRGLPSQSTG*AATTLGTRALR Trigger: CCTCAGCGCCCTTGTGCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGAAGGGAGCCCTCTCTTCAACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGAAAAAGCCCTGCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTGACACTCCTTCCCGCTaGAGATCCGAATCCCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: WQKKPCPAPSGRTSAAAVDTPSR*RSESQR Trigger: GCGTTGGGATTCGGATCTGCAGCGGGAAGGAGTGTC...AACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAGCACCTGACGGAGCCTaGAGGAAGGGTGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQFWNLFLTPLSHLHRPSAPDGA*RKGGPQ Trigger: CTGGGGGCCACCCTTCCTGCAGGCTCCGTCAGGTGC...TGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCCCTGGGAGTGGTAACTaGTGTGGAACAAGCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPTPKQHHSSTAPIAWAIPGSGN*CGTSGL Trigger: CAGACCGCTTGTTCCACACCAGTTACCACTCCCAGG...GATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGAAAAAGCCCTGCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTCCCTTCCCAGTCCACTaGTTTGGCTGCCACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: WQKKPCPAPSGRTSAAAVPFPVH*FGCHHT Trigger: AGTGTGGTGGCAGCCAAACCAGTGGACTGGGAAGGG...AACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | GAATGTCCAGTAAAGACGGAAGCATCGCTAGGCTGTCCGGTATACTGCAGCACGGCACCTGACGGAGCCTaGAGGAAGGGTGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ECPVKTEASLGCPVYCSTAPDGA*RKGGPQ Trigger: CTGGGGGCCACCCTTCCTGCAGGCTCCGTCAGGTGC...CGTGCTGCAGTATACCGGACAGCCTAGCGATGCTTCCGTCTTTACTGGACATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGGATGAAGTTGAGGGATaGACAGAAGATCCCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKGRTREGAHHGLAGLERDEVEG*TEDPRE Trigger: CTCTCGGGGATCTTCTGTGCATCCCTCAACTTCATC...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | GCAGCACGGGGAAGGCCCGATAAGGATGGGAGTTGTACAGCAGAGTACTCAGCTTGCGGAACTGGAATGTaGCGGCCACGTCGCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AARGRPDKDGSCTAEYSACGTGM*RPRRRK Trigger: CTTCCGGCGACGTGGCCGCCACATTCCAGTTCCGCA...AGCTGAGTACTCTGCTGTACAACTCCCATCCTTATCGGGCCTTCCCCGTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| CDS-3UTR TCA 90 bp | CGCTTTCGGCTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGAGGCGGTGGGAGTaGCGGTATTGGTGGCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RFRLQFWNLFLTPLSHLHRRRWE*RYWWRR Trigger: TCGACGCCACCAATACCGTCACTCCCACCGCCTCCT...GTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAGCCGAAAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCGGGGTGGGCAGGTTCACTAGCAAGGGCTCTGTGTAGAGTCGGACAAAGTCCGAATCCCAACGCGTaGGGAACTGGAATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGWAGSLARALCRVGQSPNPNA*GTGMWR Trigger: CCGCCACATTCCAGTTCCGCACGCGTTGGGATTCGG...ACTTTGTCCGACTCTACACAGAGCCCTTGCTAGTGAACCTGCCCACCCCGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCGTCCACTGGTTTGGCTaGCACCACACTGGGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LETTPWPRPAPEGVSLKSVHWFG*HHTGHK Trigger: CTTGTGCCCAGTGTGGTGGCAGCCAAACCAGTGGAC...GCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGCCCTCACAACGCGTGCGGAACTaGAATGTGGCGGCCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQFWNLFLTPLSHLHRPSQRVRN*NVAATS Trigger: CGACGTGGCCGCCACATTCCAGTTCCGCACGCGTTG...TGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTAACTCTGGAGACACAGCGGGTGGCAGAAAAAGCCCTGCCCTGCTCCCTCCCGCAGGGAGTACTTaGAGATCAGCTGTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KANSGDTAGGRKSPALLPPAGST*RSAVPG Trigger: CCCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGG...AGGGAGCAGGGCAGGGCTTTTTCTGCCACCCGCTGTGTCTCCAGAGTTAGCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGAAAAAGCCCTGCCCTGCTCCCTCGGGTCGGACGAGTGCAGCTGCAGTTGCTCCCAGGAGATGCTaGTACAGTGAGCATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WQKKPCPAPSGRTSAAAVAPRRC*YSEHFC Trigger: GCAGAAATGCTCACTGTACCAGCATCTCCTGGGAGC...AACTGCAGCTGCACTCGTCCGACCCGAGGGAGCAGGGCAGGGCTTTTTCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR TCA 90 bp | CCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCCCGAGAGGACATTGCTaGGCTCCCTCCAGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PKQHHSSTAPIAWAIRMSPRGHC*APSRTY Trigger: ATAAGTCCTGGAGGGAGCTCAGCAATGTCCTCTCGG...GGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | CGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCTAACTCTGGAGACCGGCCTTGGAACTaGAGGGCAAGAGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGPDQLQRELASKANSGDRPWN*RARASS Trigger: GGAAGAAGCTCTTGCCCTGCAGTTCCAAGGCCGGTC...TCCAGAGTTAGCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | ACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCATCAGCTCCCAGGAGATaGTGGTACAGTGAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPPNSTTALLRPLPGPSSAPRR*WYSEHF Trigger: GAAATGCTCACTGTACCAGCATCTCCTGGGAGCTGA...TGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCACCACTCACGTACCGCTaGGCATGCAGGAAGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PPSHLPQPVSPGPIHSLSPLTYR*ACRKGT Trigger: CGTGCCCTTCCTGCATGCGCAGCGGTACGTGAGTGG...TGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTCCAGTAAAGACGGAAGCATCGCTAGGCTGTCCGGTATACTGCAGCACGCAACGCGTGCGGAACTaGAATGTGGCGGCCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ECPVKTEASLGCPVYCSTQRVRN*NVAATS Trigger: CGACGTGGCCGCCACATTCCAGTTCCGCACGCGTTG...CGTGCTGCAGTATACCGGACAGCCTAGCGATGCTTCCGTCTTTACTGGACATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCGTCGGACAAAGTAGCTaGAGCCATCAGACACCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LETTPWPRPAPEGVSLKSVGQSS*SHQTPG Trigger: TCCCGGTGTCTGATGGCTCCAGCTACTTTGTCCGAC...GCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR TCA 90 bp | AGGATGGGAAGGGATTTGGCTCAAGTCTACCACACTGGAAACCACGCCTTGGCCTCCAAAAGCCTTGCGTaGACGACAGGTGGAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RMGRDLAQVYHTGNHALASKSLA*TTGGAP Trigger: GGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGA...GGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGGGTTTCGAGAGTTATTaGTCATGGCTGTGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GKGRTREGAHHGLAGLERGFESY*SWLCQT Trigger: TGTTTGACACAGCCATGATCAATAACTCTCGAAACC...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | TGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCTGTCCTCCAAAAGCCTTaGGTGAACGACAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKPRLGPDQLQRELASKAVLQKP*VNDRWS Trigger: GCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGAC...AGCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR GCA 90 bp | CCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAGGTTTACTTTGGAAACTGTTACGTACCGCTGCGCATaGAGGAAGGGCACGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNPSFPPAQALRFTLETVTYRCA*RKGTGR Trigger: CCTACCCGTGCCCTTCCTGCATGCGCAGCGGTACGT...AACAGTTTCCAAAGTAAACCTGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCGTAATGGTGAGCGTGTaGACATACAGCCGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LETTPWPRPAPEGVSLKSVMVSV*TYSRRY Trigger: GTACCTGCGGCTGTATGTGCACACGCTCACCATTAC...GCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | GATGGGAAGGGATTTGGCTCAAGTCTACCACACTGGAAACCACGCCTTGGCCCACTGAGAGACCGGCCTTaGAACTGCAGGGCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGKGFGSSLPHWKPRLGPLRDRP*NCRARA Trigger: AGCTCTTGCCCTGCAGTTCCAAGGCCGGTCTCTCAG...TGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGCCCTCACTGAGAGACCGGCCTTaGAACTGCAGGGCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFWNLFLTPLSHLHRPSLRDRP*NCRARA Trigger: AGCTCTTGCCCTGCAGTTCCAAGGCCGGTCTCTCAG...TGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCCTCTTCCATTTGAGCTaGATGTTGAGGTTTCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPTPKQHHSSTAPIAWAILFHLS*MLRFRE Trigger: CTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAG...GATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAAGACGGAGGCGCTGAGGACAGATaGGCTGACATAGAAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSTAPIAWAIRMSSKDGGAEDR*ADIEAV Trigger: CACGGCTTCTATGTCAGCCCATCTGTCCTCAGCGCC...TCCGTCTTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| 3UTR CAA 72 bp | GAAGCACGGCTGCCACAGGAGAGGATGGGAAGGGATTaGGCTCAAGTCTACCACACTGGAAACCACGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EARLPQERMGRD*AQVYHTGNHAL Trigger: CAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATCCTCTCCTGTGGCAGCCGTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| 3UTR CAA 72 bp | CCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATaGCCTGGGCCATCAGAATGTCCAGTAAAGACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPPNSTTALLRP*PGPSECPVKTE Trigger: TTCCGTCTTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAGTCTACCACACTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGATGTGAAAGGTTCGGGTaGGGAGATTGTAGAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSTTLETTPWPRPAPEGCERFG*GDCRRS Trigger: GCTCCTTCTACAATCTCCTCACCCGAACCTTTCACA...TCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGGTAGTGGATGTAACTTaGTTTATTCTCCTTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKGRTREGAHHGLAGLERVVDVT*FILLAL Trigger: AAGGGCAAGGAGAATAAACCAAGTTACATCCACTAC...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| 3UTR CAA 72 bp | AAGCGGTCTGCTTTCAATAGCACTGAGAGACCGGCCTaGGAACTGCAGGGCAAGAGCTTCTTCCATGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRSAFNSTERPA*ELQGKSFFHGV Trigger: CACGCCATGGAAGAAGCTCTTGCCCTGCAGTTCCAAGGCCGGTCTCTCAGTGCTATTGAAAGCAGACCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| 3UTR CAA 72 bp | AAGCCGTGGTTGGGGTCTGGTGTGTACTCTGTCCACTaGAGCAGGGCTCGTTCAAACTGGATGGAGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPWLGSGVYSVH*SRARSNWMETL Trigger: CAAGGTCTCCATCCAGTTTGAACGAGCCCTGCTCAAGTGGACAGAGTACACACCAGACCCCAACCACGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAATTGGGCTCTTCGATGTaGAAGGTTCGGGTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHHSSTAPIAWAIRMSSKLGSSM*KVRVRR Trigger: TCTCCTCACCCGAACCTTTCACATCGAAGAGCCCAA...TTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | TTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAGGTTTAAGGCCGGATGTGCACTaGCTGGGAGTGGTAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FWNLFLTPLSHLHRPSGLRPDVH*LGVVTG Trigger: ACCAGTTACCACTCCCAGGCAGTGCACATCCGGCCT...TAAACCTGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGTGCGGAACTGGAATGTaGCGGCCACGTCGCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CFSWANPLSLRVFVMKHKCGTGM*RPRRRK Trigger: CTTCCGGCGACGTGGCCGCCACATTCCAGTTCCGCA...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGAAGCCTGCAGGAAGGGTaGCCCCCAGTATCGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGSLQEG*PPVSRP Trigger: AGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCT...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | CGCTTTCGGCTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACGCTCCCAGGAGATGCTaGTACAGTGAGCATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RFRLQFWNLFLTPLSHLHAPRRC*YSEHFC Trigger: GCAGAAATGCTCACTGTACCAGCATCTCCTGGGAGC...GTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAGCCGAAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR TCA 90 bp | CACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAAGACGGATCCTGGTGCCCAAAATaGCATCCTGGTATGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSTAPIAWAIRMSSKDGSWCPK*HPGMWK Trigger: CTTCCACATACCAGGATGTCATTTTGGGCACCAGGA...TCCGTCTTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGACCGAATCCCAACGCGTaGGGAACTGGAATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGPNPNA*GTGMWR Trigger: CCGCCACATTCCAGTTCCGCACGCGTTGGGATTCGG...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCCTCCAAAAGCCTTaGGTGAACGACAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSSTTCFSWANPLSLRVLQKP*VNDRWS Trigger: GCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGAC...TCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGTAATGGTGAGCGTGTaGACATACAGCCGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSHLPQPVSPGPIHSLSVMVSV*TYSRRY Trigger: GTACCTGCGGCTGTATGTGCACACGCTCACCATTAC...TGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAACCCGCAGGGAGTACTTaGAGATCAGCTGTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNLFLLGQSTLSQSLCHEPAGST*RSAVPG Trigger: CCCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGG...TTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTCCAGTAAAGACGGAAGCATCGCTAGGCTGTCCGGTATACTGCAGCACGAGGGCTCGTTCAAACTaGATGGAGACCTTGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: ECPVKTEASLGCPVYCSTRARSN*METLVT Trigger: CGTCACCAAGGTCTCCATCCAGTTTGAACGAGCCCT...CGTGCTGCAGTATACCGGACAGCCTAGCGATGCTTCCGTCTTTACTGGACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| 3UTR CAA 72 bp | TCTGAATCCGACACAGTGACGCTTTCGGCTGCAGTTTaGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SESDTVTLSAAV*EPVPNPSFPPA Trigger: TGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAGCCGAAAGCGTCACTGTGTCGGATTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| 3UTR CAA 72 bp | AAGTTGAGGGATGCACAGAAGATCCCCGAGAGGACATaGCTGAGCTCCCTCCAGGACTTATCCACACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLRDAQKIPERT*LSSLQDLSTLR Trigger: TCTGAGTGTGGATAAGTCCTGGAGGGAGCTCAGCAATGTCCTCTCGGGGATCTTCTGTGCATCCCTCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGATCCAAAAGCCTTGCGTaGACGACAGGTGGAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGSKSLA*TTGGAP Trigger: GGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGA...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGGACACTCCTTCCCGCTaGAGATCCGAATCCCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: CFSWANPLSLRVFVMKHKDTPSR*RSESQR Trigger: GCGTTGGGATTCGGATCTGCAGCGGGAAGGAGTGTC...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGGACCGGCCTTGGAACTaGAGGGCAAGAGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSWANPLSLRVFVMKHKDRPWN*RARASS Trigger: GGAAGAAGCTCTTGCCCTGCAGTTCCAAGGCCGGTC...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CCA 90 bp | CCCAAGAAAGTGAAGAAACTCCACACCCCACTTCTACCTCCCTCTCATCTTCCACCTGGGAGTGGTAACTaGTGTGGAACAAGCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKKVKKLHTPLLPPSHLPPGSGN*CGTSGL Trigger: CAGACCGCTTGTTCCACACCAGTTACCACTCCCAGG...TGGAAGATGAGAGGGAGGTAGAAGTGGGGTGTGGAGTTTCTTCACTTTCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGACCGAGAGGACATTGCTaGGCTCCCTCCAGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGPRGHC*APSRTY Trigger: ATAAGTCCTGGAGGGAGCTCAGCAATGTCCTCTCGG...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR GCA 90 bp | CCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAGGTTTACTTTGGAAACTGTTGATGAAGTTGAGGGATaGACAGAAGATCCCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNPSFPPAQALRFTLETVDEVEG*TEDPRE Trigger: CTCTCGGGGATCTTCTGTGCATCCCTCAACTTCATC...AACAGTTTCCAAAGTAAACCTGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGACAACCGAAAGGGTCTaGCTCAGCTCCCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CFSWANPLSLRVFVMKHKTTERV*LSSQEM Trigger: CATCTCCTGGGAGCTGAGGCAGACCCTTTCGGTTGT...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGACCTGGCTGTAGCCTGTaGTGTCCACATAAACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGPGCSL*CPHKLG Trigger: GCCTAGTTTATGTGGACATCACAGGCTACAGCCAGG...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGAGAGATGCTGGTACAGTaGGCATTTCTGCAGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGEMLVQ*AFLQIG Trigger: GCCTATCTGCAGAAATGCTCACTGTACCAGCATCTC...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR TCA 90 bp | CACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAATCCTGGTGCCCAAAATaGCATCCTGGTATGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLFLLGQSTLSQSLCHESWCPK*HPGMWK Trigger: CTTCCACATACCAGGATGTCATTTTGGGCACCAGGA...TTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR GCA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGATCAGCTCCCAGGAGATaGTGGTACAGTGAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGSAPRR*WYSEHF Trigger: GAAATGCTCACTGTACCAGCATCTCCTGGGAGCTGA...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CCA 90 bp | CACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAACAAGAGCTTCTTCCATaGCGTGAGGTTCTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HNLFLLGQSTLSQSLCHEQELLP*REVLSA Trigger: TGCACTGAGAACCTCACGCCATGGAAGAAGCTCTTG...TTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CCA 90 bp | CCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAGGTTTACTTTGGAAACTGTTCTCTTCCATTTGAGCTaGATGTTGAGGTTTCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNPSFPPAQALRFTLETVLFHLS*MLRFRE Trigger: CTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAG...AACAGTTTCCAAAGTAAACCTGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CCA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGGGGTCGCTCCTCACTTaGTTTATTCTCCTTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFSWANPLSLRVFVMKHKGSLLT*FILLAL Trigger: AAGGGCAAGGAGAATAAACCAAGTGAGGAGCGACCC...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| 3UTR CAA 72 bp | ACGGGTAGGGCCTCATTATCTGGGGGTCTCTTCCATTaGAGCTGGATGTTGAGGTTTCGAGAGTTATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TGRASLSGGLFH*SWMLRFRELLI Trigger: GATCAATAACTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAGACCCCCAGATAATGAGGCCCTACCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| CDS-3UTR TCA 90 bp | CCCAAGAAAGTGAAGAAACTCCACACCCCACTTCTACCTCCCTCTCATCTTCCAGGTTTCGAGAGTTATTaGTCATGGCTGTGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PKKVKKLHTPLLPPSHLPGFESY*SWLCQT Trigger: TGTTTGACACAGCCATGATCAATAACTCTCGAAACC...TGGAAGATGAGAGGGAGGTAGAAGTGGGGTGTGGAGTTTCTTCACTTTCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR GCA 90 bp | GATGGGAAGGGATTTGGCTCAAGTCTACCACACTGGAAACCACGCCTTGGCCCATCTTCATGTTGTATGTaGATGCATACTGATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DGKGFGSSLPHWKPRLGPSSCCM*MHTDAN Trigger: ATTTGCATCAGTATGCATGCACATACAACATGAAGA...TGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| 3UTR CAA 72 bp | TCATTATCTGGGGGTCTCTTCCATTTGAGCTGGATGTaGAGGTTTCGAGAGTTATTGATCATGGCTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSGGLFHLSWM*RFRELLIMAVS Trigger: TGACACAGCCATGATCAATAACTCTCGAAACCTCAACATCCAGCTCAAATGGAAGAGACCCCCAGATAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| CDS CCA 90 bp | GGAAGGCAGTGGAGTGATAACGAGCTCTTCTCGCAGGCTGTCGCGTaGGCCCTCCGCGCAGCCACAGCAGCCCCGTCCCACCAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GRQWSDNELFSQAVA*ALRAATAAPSHQQQ Trigger: CTGTTGCTGGTGGGACGGGGCTGCTGTGGCTGCGCGGAGGGCCCACGCGACAGCCTGCGAGAAGAGCTCGTTATCACTCCACTGCCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS-3UTR CAA 90 bp | ACACCACGGGCTCGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAACCGGGAACAAGGTGTaGAAGAGAGGGCTCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPRARRTREGAHHGRAGLTGNKV*KRGLPS Trigger: GGAAGGGAGCCCTCTCTTCAACACCTTGTTCCCGGT...TAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCGAGCCCGTGGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS CCA 90 bp | ACGCGTGCGGAACTGGAATGTGGCGGCCACGTCGCCGGAAGGCAGTaGAGTGATAACGAGCTCTTCTCGCAGGCTGTCGCGTGGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRAELECGGHVAGRQ*SDNELFSQAVAWAL Trigger: GAGGGCCCACGCGACAGCCTGCGAGAAGAGCTCGTTATCACTCCACTGCCTTCCGGCGACGTGGCCGCCACATTCCAGTTCCGCACGCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS-3UTR CAA 90 bp | CGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGCACACCGTGGGAGTGACGGTATaGGTGGCGTCGATGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTREGAHHGRAGLERGHTVGVTV*VASMKL Trigger: CAACTTCATCGACGCCACCAATACCGTCACTCCCAC...GGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | ACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGCACACCACGAACTGGATGGAGACCTaGGTGACGGAGTTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TREGAHHGRAGLERGHTTNWMET*VTELAG Trigger: GCCAGCCAACTCCGTCACCAAGGTCTCCATCCAGTT...CGTGGTGTGCCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | CGCCGGACTAGAGAGGGGGCACACCACGGGCGCGCCGGACTAGAGAGGGGGTACCCTGTCCTGAGCAGGTaGGTAGTGGATGTAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRTREGAHHGRAGLERGYPVLSR*VVDVTW Trigger: CCAAGTTACATCCACTACCAACCTGCTCAGGACAGG...GTACCCCCTCTCTAGTCCGGCGCGCCCGTGGTGTGCCCCCTCTCTAGTCCGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | CACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCTCCCGCAGGGAGTACTaGGAGATCAGCTGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPTPKQHHSSTAPIAWAISRREY*EISCPR Trigger: CCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGGA...GATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| CDS TCA 90 bp | CACATCGGTGACAGTGTCTTGGAACCAGACCCAGAGCTCTGCACCTaGCGGAGCCTGCAGGAAGGGTGGCCCCCAGTATCGCGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HIGDSVLEPDPELCT*RSLQEGWPPVSRPP Trigger: TGGAGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCTCCGTCAGGTGCAGAGCTCTGGGTCTGGTTCCAAGACACTGTCACCGATGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 |
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| CDS GCA 90 bp | TGTAATGGGACACTCCTTCCCGCTGCAGATCCGAATCCCAACGCGTaGGGAACTGGAATGTGGCGGCCACGTCGCCGGAAGGCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CNGTLLPAADPNPNA*GTGMWRPRRRKAVE Trigger: CTCCACTGCCTTCCGGCGACGTGGCCGCCACATTCCAGTTCCGCACGCGTTGGGATTCGGATCTGCAGCGGGAAGGAGTGTCCCATTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS GCA 90 bp | GCCTGCAGGAAGGGTGGCCCCCAGTATCGCGTCCTCCAAAAGCCTTaGGTGAACGACAGGTGGAGCTCCCGCAGGGAGTACTTGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: ACRKGGPQYRVLQKP*VNDRWSSRREYLEI Trigger: GATCTCCAAGTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATACTGGGGGCCACCCTTCCTGCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CCA 90 bp | GACACTCCTTCCCGCTGCAGATCCGAATCCCAACGCGTGCGGAACTaGAATGTGGCGGCCACGTCGCCGGAAGGCAGTGGAGTGATAACG | + |
|
Preference number: 5 (lower is better) Translates to: DTPSRCRSESQRVRN*NVAATSPEGSGVIT Trigger: CGTTATCACTCCACTGCCTTCCGGCGACGTGGCCGCCACATTCCAGTTCCGCACGCGTTGGGATTCGGATCTGCAGCGGGAAGGAGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CCA 90 bp | GGCCCCCAGTATCGCGTCCTCCAAAAGCCTTGCGTGAACGACAGGTaGAGCTCCCGCAGGGAGTACTTGGAGATCAGCTGTCCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPQYRVLQKPCVNDR*SSRREYLEISCPRA Trigger: AGCCCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATACTGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS TCA 90 bp | GCAGGAAGGGTGGCCCCCAGTATCGCGTCCTCCAAAAGCCTTGCGTaGACGACAGGTGGAGCTCCCGCAGGGAGTACTTGGAGATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGRVAPSIASSKSLA*TTGGAPAGSTWRSA Trigger: AGCTGATCTCCAAGTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATACTGGGGGCCACCCTTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS TCA 90 bp | ATAGTCGGTGACAGTGTCTTGGAACCAGACCCAGAGCTCTGCACCTaGCGGAGCCTGCAGGAAGGGTGGCCCCCAGTATCGCGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IVGDSVLEPDPELCT*RSLQEGWPPVSRPP Trigger: TGGAGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCTCCGTCAGGTGCAGAGCTCTGGGTCTGGTTCCAAGACACTGTCACCGACTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| CDS GCA 90 bp | ACAGTGTCTTGGAACCAGACCCAGAGCTCTGCACCTGACGGAGCCTaGAGGAAGGGTGGCCCCCAGTATCGCGTCCTCCAAAAGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVSWNQTQSSAPDGA*RKGGPQYRVLQKPC Trigger: GCAAGGCTTTTGGAGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCTCCGTCAGGTGCAGAGCTCTGGGTCTGGTTCCAAGACACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGGTGTACTCTGTCCACTaGAGCAGGGCTCGTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKGRTREGAHHGLAGLERVYSVH*SRARSN Trigger: GTTTGAACGAGCCCTGCTCAAGTGGACAGAGTACAC...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | GGGAAAGGGAGGACTAGAGAGGGGGCACACCACGGGCTCGCCGGACTAGAGAGGGGGGGTCTCTTCCATTaGAGCTGGATGTTGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKGRTREGAHHGLAGLERGGLFH*SWMLRF Trigger: AAACCTCAACATCCAGCTCAAATGGAAGAGACCCCC...CCTCTCTAGTCCGGCGAGCCCGTGGTGTGCCCCCTCTCTAGTCCTCCCTTTCCC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | CCACTTGAGCAGGGCTCGTTCAAACTGGATGGAGACCTTGGTGACGGAGTTGGCTCCCGCAGGGAGTACTaGGAGATCAGCTGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLEQGSFKLDGDLGDGVGSRREY*EISCPR Trigger: CCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGGA...GCCAACTCCGTCACCAAGGTCTCCATCCAGTTTGAACGAGCCCTGCTCAAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| CDS-3UTR CAA 90 bp | CTACCACACTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCATCGGTGACAGTGTCTaGGAACCAGACCCAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPHWKPRLGPDQLQRELAIGDSV*EPDPEL Trigger: GAGCTCTGGGTCTGGTTCCAAGACACTGTCACCGAT...GGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | CGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCTCAAAAGCTAACTCTGGACCTGGTATGTGGAAGTaGGGGGAGGGCTCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLGPDQLQRELASKANSGPGMWK*GEGSPP Trigger: TGGAGGTGAGCCCTCCCCCAACTTCCACATACCAGG...TCCAGAGTTAGCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | CACCCCACCCCCAAACAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCTTATTCTCCTTGCCCTaGGAGGTAATGGTGAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: HPTPKQHHSSTAPIAWAILFSLP*EVMVSV Trigger: CACGCTCACCATTACCTCCAAGGGCAAGGAGAATAA...GATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTGTTTGGGGGTGGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | GATGGGAAGGGATTTGGCTCAAGTCTACCACACTGGAAACCACGCCTTGGCCCATCCCAGTCCACTGGTTaGGCTGCCACCACACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGKGFGSSLPHWKPRLGPSQSTG*AATTLG Trigger: GCCCAGTGTGGTGGCAGCCAAACCAGTGGACTGGGA...TGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTTGAGCCAAATCCCTTCCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS CCA 90 bp | TTGCTGAGCTCCCTCCAGGACTTATCCACATCGGTGACAGTGTCTTaGAACCAGACCCAGAGCTCTGCACCTGACGGAGCCTGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSLQDLSTSVTVS*NQTQSSAPDGACRK Trigger: CTTCCTGCAGGCTCCGTCAGGTGCAGAGCTCTGGGTCTGGTTCCAAGACACTGTCACCGATGTGGATAAGTCCTGGAGGGAGCTCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 |
||
| CDS-3UTR CAA 90 bp | CGCTTTCGGCTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACACTGAGAGACCGGCCTaGGAACTGCAGGGCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFRLQFWNLFLTPLSHLHTERPA*ELQGKS Trigger: GCTCTTGCCCTGCAGTTCCAAGGCCGGTCTCTCAGT...GTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAGCCGAAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAACGTCCTCCAAAAGCCTaGCGTGAACGACAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QHHSSTAPIAWAIRMSSKRPPKA*RERQVE Trigger: CTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACG...TTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000152522.8 |
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| CDS-3UTR CAA 90 bp | GAATGTCCAGTAAAGACGGAAGCATCGCTAGGCTGTCCGGTATACTGCAGCACGACTGAGAGACCGGCCTaGGAACTGCAGGGCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: ECPVKTEASLGCPVYCSTTERPA*ELQGKS Trigger: GCTCTTGCCCTGCAGTTCCAAGGCCGGTCTCTCAGT...CGTGCTGCAGTATACCGGACAGCCTAGCGATGCTTCCGTCTTTACTGGACATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | ACACCACGGGCTCACAGGACTAGAGAGGGGGTACACCACGGGCACGCCGGACTAGGTAGTGGATGTAACTaGGTTTATTCTCCTTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: TPRAHRTREGVHHGHAGLGSGCN*VYSPCP Trigger: AGGGCAAGGAGAATAAACCAAGTTACATCCACTACC...TAGTCCGGCGTGCCCGTGGTGTACCCCCTCTCTAGTCCTGTGAGCCCGTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | CCCCTGTCCTGTGATGAAGGCATCAAAGACAACCGAAAGGGTCTGCCTCAGCTCGTCGGTGACAGTGTCTaGGAACCAGACCCAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: PLSCDEGIKDNRKGLPQLVGDSV*EPDPEL Trigger: GAGCTCTGGGTCTGGTTCCAAGACACTGTCACCGAC...GAGCTGAGGCAGACCCTTTCGGTTGTCTTTGATGCCTTCATCACAGGACAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| CDS GCA 90 bp | TCACTTGGTTTATTCTCCTTGCCCTTGGAGGTAATGGTGAGCGTGTaGACATACAGCCGCAGGTACCAGGGCACGACATCCAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SLGLFSLPLEVMVSV*TYSRRYQGTTSSSS Trigger: GCTGCTGCTGGATGTCGTGCCCTGGTACCTGCGGCTGTATGTGCACACGCTCACCATTACCTCCAAGGGCAAGGAGAATAAACCAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGATCCCGCAGGGAGTACTaGGAGATCAGCTGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLSSSTTCFSWANPLSLRSRREY*EISCPR Trigger: CCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGGA...TCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAATCGGTGACAGTGTCTaGGAACCAGACCCAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LQFWNLFLTPLSHLHRPSIGDSV*EPDPEL Trigger: GAGCTCTGGGTCTGGTTCCAAGACACTGTCACCGAT...TGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | AAGTCTACCACACTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTGTGGCGTCGATGAAGTaGAGGGATGCACAGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: KSTTLETTPWPRPAPEGVVASMK*RDAQKI Trigger: GATCTTCTGTGCATCCCTCAACTTCATCGACGCCAC...AACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | CCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAGGTTTACTTTGGAAACTGTTCCTGGTATGTGGAAGTaGGGGGAGGGCTCACCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PNPSFPPAQALRFTLETVPGMWK*GEGSPP Trigger: TGGAGGTGAGCCCTCCCCCAACTTCCACATACCAGG...AACAGTTTCCAAAGTAAACCTGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGTGGGAGTGACGGTATaGGTGGCGTCGATGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: PPSHLPQPVSPGPIHSLSVGVTV*VASMKL Trigger: CAACTTCATCGACGCCACCAATACCGTCACTCCCAC...TGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCTCATCTTCCACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGGGGTCGCTCCTCACTaGGTTTATTCTCCTTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: PPSHLPQPVSPGPIHSLSGVAPH*VYSPCP Trigger: AGGGCAAGGAGAATAAACCAAGTGAGGAGCGACCCC...TGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTGGAAGATGAGAGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CTACCACACTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGCCCATTTGAGCTGGATGTaGAGGTTTCGAGAGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: LPHWKPRLGPDQLQRELAHLSWM*RFRELL Trigger: CAATAACTCTCGAAACCTCAACATCCAGCTCAAATG...GGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | TCTCTCAGAGTCTTTGTCATGAAGCACAAGAATGTGCTTAGGGGCTCAGGAGGACGTCCTCCAAAAGCCTaGCGTGAACGACAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SLRVFVMKHKNVLRGSGGRPPKA*RERQVE Trigger: CTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACG...TCCTCCTGAGCCCCTAAGCACATTCTTGTGCTTCATGACAAAGACTCTGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CAGCACCACAGCTCTACTGCGCCCATTGCCTGGGCCATCAGAATGTCCAGTAAACTTGGTTTATTCTCCTaGCCCTTGGAGGTAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: QHHSSTAPIAWAIRMSSKLGLFS*PLEVMV Trigger: CACCATTACCTCCAAGGGCAAGGAGAATAAACCAAG...TTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAGAGCTGTGGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | AAGTCTACCACACTGGAAACCACGCCTTGGCCCAGACCAGCTCCAGAGGGAGTTAGGTTTCGAGAGTTATaGATCATGGCTGTGTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: KSTTLETTPWPRPAPEGVRFREL*IMAVSN Trigger: GTTTGACACAGCCATGATCAATAACTCTCGAAACCT...AACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGTTTCCAGTGTGGTAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103101.11 |
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| CDS-3UTR CAA 90 bp | TTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACAGGCCCTCAGGTTTAGGGGGTCTCTTCCATTaGAGCTGGATGTTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: FWNLFLTPLSHLHRPSGLGGLFH*SWMLRF Trigger: AAACCTCAACATCCAGCTCAAATGGAAGAGACCCCC...TAAACCTGAGGGCCTGTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGGTGGCGTCGATGAAGTaGAGGGATGCACAGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: CFSWANPLSLRVFVMKHKVASMK*RDAQKI Trigger: GATCTTCTGTGCATCCCTCAACTTCATCGACGCCAC...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CGCTTTCGGCTGCAGTTTTGGAACCTGTTCCTAACCCCTCTTTCCCACCTGCACCATTTGAGCTGGATGTaGAGGTTTCGAGAGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: RFRLQFWNLFLTPLSHLHHLSWM*RFRELL Trigger: CAATAACTCTCGAAACCTCAACATCCAGCTCAAATG...GTGCAGGTGGGAAAGAGGGGTTAGGAACAGGTTCCAAAACTGCAGCCGAAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | CACAACCTGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAATTATTCTCCTTGCCCTaGGAGGTAATGGTGAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: HNLFLLGQSTLSQSLCHELFSLP*EVMVSV Trigger: CACGCTCACCATTACCTCCAAGGGCAAGGAGAATAA...TTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACAGGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS TCA 90 bp | ATTTCTTCATGTTGTATGTGCATGCATACTGATGCAAATAGTCGGTaGCAGTGTCTTGGAACCAGACCCAGAGCTCTGCACCTGACGGAG | + |
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Preference number: 5 (lower is better) Translates to: ISSCCMCMHTDANSR*QCLGTRPRALHLTE Trigger: CTCCGTCAGGTGCAGAGCTCTGGGTCTGGTTCCAAGACACTGTCACCGACTATTTGCATCAGTATGCATGCACATACAACATGAAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152522.8 |
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| CDS-3UTR CAA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGCTTGGTTTATTCTCCTaGCCCTTGGAGGTAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: CFSWANPLSLRVFVMKHKLGLFS*PLEVMV Trigger: CACCATTACCTCCAAGGGCAAGGAGAATAAACCAAG...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS-3UTR CAA 90 bp | TGTTTCTCCTGGGCCAATCCACTCTCTCTCAGAGTCTTTGTCATGAAGCACAAGAGGTTTCGAGAGTTATaGATCATGGCTGTGTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: CFSWANPLSLRVFVMKHKRFREL*IMAVSN Trigger: GTTTGACACAGCCATGATCAATAACTCTCGAAACCT...CTTGTGCTTCATGACAAAGACTCTGAGAGAGAGTGGATTGGCCCAGGAGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS CCA 72 bp | TGGAGTGATAACGAGCTCTTCTCGCAGGCTGTCGCGTaGGCCCTCCGCGCAGCCACAGCAGCCCCGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: WSDNELFSQAVA*ALRAATAAPSH Trigger: GTGGGACGGGGCTGCTGTGGCTGCGCGGAGGGCCCACGCGACAGCCTGCGAGAAGAGCTCGTTATCACTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CCA 72 bp | TCCCGCTGCAGATCCGAATCCCAACGCGTGCGGAACTaGAATGTGGCGGCCACGTCGCCGGAAGGCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SRCRSESQRVRN*NVAATSPEGSG Trigger: TCCACTGCCTTCCGGCGACGTGGCCGCCACATTCCAGTTCCGCACGCGTTGGGATTCGGATCTGCAGCGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS GCA 72 bp | TGGAACCAGACCCAGAGCTCTGCACCTGACGGAGCCTaGAGGAAGGGTGGCCCCCAGTATCGCGTCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: WNQTQSSAPDGA*RKGGPQYRVLQ Trigger: TTGGAGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCTCCGTCAGGTGCAGAGCTCTGGGTCTGGTTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS TCA 72 bp | GTGGCCCCCAGTATCGCGTCCTCCAAAAGCCTTGCGTaGACGACAGGTGGAGCTCCCGCAGGGAGTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: VAPSIASSKSLA*TTGGAPAGSTW Trigger: CCAAGTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATACTGGGGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS GCA 72 bp | AAGGGTGGCCCCCAGTATCGCGTCCTCCAAAAGCCTTaGGTGAACGACAGGTGGAGCTCCCGCAGGGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: KGGPQYRVLQKP*VNDRWSSRREY Trigger: GTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATACTGGGGGCCACCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CCA 72 bp | GAACTGGAATGTGGCGGCCACGTCGCCGGAAGGCAGTaGAGTGATAACGAGCTCTTCTCGCAGGCTGTCGCG | + |
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Preference number: 6 (lower is better) Translates to: ELECGGHVAGRQ*SDNELFSQAVA Trigger: CGCGACAGCCTGCGAGAAGAGCTCGTTATCACTCCACTGCCTTCCGGCGACGTGGCCGCCACATTCCAGTTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CAA 72 bp | GAAGGGTGGCCCCCAGTATCGCGTCCTCCAAAAGCCTaGCGTGAACGACAGGTGGAGCTCCCGCAGGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: EGWPPVSRPPKA*RERQVELPQGV Trigger: TACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATACTGGGGGCCACCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CAA 90 bp | AGCCTGCAGGAAGGGTGGCCCCCAGTATCGCGTCCTCCAAAAGCCTaGCGTGAACGACAGGTGGAGCTCCCGCAGGGAGTACTTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SLQEGWPPVSRPPKA*RERQVELPQGVLGD Trigger: ATCTCCAAGTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATACTGGGGGCCACCCTTCCTGCAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CAA 72 bp | TGCGTGAACGACAGGTGGAGCTCCCGCAGGGAGTACTaGGAGATCAGCTGTCCCAGGGCTTTAGGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: CVNDRWSSRREY*EISCPRALGKS Trigger: GCTCTTCCCTAAAGCCCTGGGACAGCTGATCTCCAAGTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CCA 72 bp | TATCGCGTCCTCCAAAAGCCTTGCGTGAACGACAGGTaGAGCTCCCGCAGGGAGTACTTGGAGATCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: YRVLQKPCVNDR*SSRREYLEISC Trigger: ACAGCTGATCTCCAAGTACTCCCTGCGGGAGCTCCACCTGTCGTTCACGCAAGGCTTTTGGAGGACGCGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 ENSMUST00000152522.8 |
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| CDS CAA 72 bp | GGGGGTCGCTCCTCACTTGGTTTATTCTCCTTGCCCTaGGAGGTAATGGTGAGCGTGTGCACATACAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGRSSLGLFSLP*EVMVSVCTYSR Trigger: GCGGCTGTATGTGCACACGCTCACCATTACCTCCAAGGGCAAGGAGAATAAACCAAGTGAGGAGCGACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117066.8 |
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| CDS CAA 90 bp | GCGTCGATGAAGTTGAGGGATGCACAGAAGATCCCCGAGAGGACATaGCTGAGCTCCCTCCAGGACTTATCCACATCGGTGACAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ASMKLRDAQKIPERT*LSSLQDLSTSVTVS Trigger: AGACACTGTCACCGATGTGGATAAGTCCTGGAGGGAGCTCAGCAATGTCCTCTCGGGGATCTTCTGTGCATCCCTCAACTTCATCGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 |
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| CDS CAA 72 bp | AAGTTGAGGGATGCACAGAAGATCCCCGAGAGGACATaGCTGAGCTCCCTCCAGGACTTATCCACATCGGTG | + |
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Preference number: 6 (lower is better) Translates to: KLRDAQKIPERT*LSSLQDLSTSV Trigger: CACCGATGTGGATAAGTCCTGGAGGGAGCTCAGCAATGTCCTCTCGGGGATCTTCTGTGCATCCCTCAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103101.11 ENSMUST00000117066.8 |
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