Pregenerated sensors for PIGR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026417Ensembl transcript IDs: ENSMUST00000027675.14, ENSMUST00000133792.8, ENSMUST00000137782.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTTATGGCTTGTGTATGCCTATGAGGCACAGAGGCAGGAGGTATaGCTGGTAATGATGTCTTATCTTAATGAAAAGACAGAATCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PLWLVYAYEAQRQEV*LVMMSYLNEKTESG Trigger: CCCAGATTCTGTCTTTTCATTAAGATAAGACATCATTACCAGGCATACCTCCTGCCTCTGTGCCTCATAGGCATACACAAGCCATAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR TCA 90 bp | TTCTCATCTGAAAATCATGATGCCCTTATGGCTTGTGTATGCCTATaGGGCACAGAGGCAGGAGGTATGCCTGGTAATGATGTCTTATCT | + |
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Preference number: 1 (lower is better) Translates to: FSSENHDALMACVCL*GTEAGGMPGNDVLS Trigger: AGATAAGACATCATTACCAGGCATACCTCCTGCCTCTGTGCCTCATAGGCATACACAAGCCATAAGGGCATCATGATTTTCAGATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR GCA 90 bp | ACTATTGGAAAAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTaGTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: TIGKTAAPRLHLLPV*SKLSKYKRLRVSFP Trigger: AGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTTTTCCAATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCTCAATGTATCCCAGGCTGGCCTTAAACTCCCTAGGTAGCCAAGGATTAGAACCAGCACACCTCTaGGGACAGGAGGGAAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: QVSMYPRLALNSLGSQGLEPAHL*GQEGRA Trigger: CGCTCTTCCCTCCTGTCCTCAGAGGTGTGCTGGTTC...TAATCCTTGGCTACCTAGGGAGTTTAAGGCCAGCCTGGGATACATTGAGACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR TCA 90 bp | AAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAAATCTCAGATGTGTTGTTTaGATCAAGAGGATAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: KQLLPGSIFYLSAQNSPNLRCVV*IKRIGK Trigger: CTTTCCTATCCTCTTGATTCAAACAACACATCTGAG...ATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR TCA 90 bp | CTACCTGTCTGCTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCTCTCACTAGGCACTCTTaGGAAACATCTCTTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: LPVCSKLSKYKRLRVSFPLTRHS*ETSLLI Trigger: GATGAGAAGAGATGTTTCTCAAGAGTGCCTAGTGAG...AGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTCTGCTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCTTAAGAAAGATTGTGGCCTaGCTCTCAGCATTTAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: TCLLKTLQIQEVESIFPLRKIVA*LSAFSR Trigger: CCTACTAAATGCTGAGAGCCAGGCCACAATCTTTCT...TAAGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR TCA 90 bp | GAACTTCTGATCCTATTTTTACCTCTTAATATTGGGATTGCAGGAGCACACCACAGAGAAGAGTTACGCTaGCATCCTATCATATGGTTA | + |
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Preference number: 2 (lower is better) Translates to: ELLILFLPLNIGIAGAHHREELR*HPIIWL Trigger: TAACCATATGATAGGATGTCAGCGTAACTCTTCTCT...GTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAAAAATAGGATCAGAAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR CCA 90 bp | TTACCTCTTAATATTGGGATTGCAGGAGCACACCACCATGCTCCTTTAACTCATTTTATAGAAAGATTGTaGCCTGGCTCTCAGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: LPLNIGIAGAHHHAPLTHFIERL*PGSQHL Trigger: TAAATGCTGAGAGCCAGGCCACAATCTTTCTATAAA...ATGAGTTAAAGGAGCATGGTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR TCA 72 bp | AGGCTTCCATGGCCGAGGAAGGAACCAGCACACCTCTaGGGACAGGAGGGAAGAGCGGAGGTGATGGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RLPWPRKEPAHL*GQEGRAEVMGE Trigger: CTCACCCATCACCTCCGCTCTTCCCTCCTGTCCTCAGAGGTGTGCTGGTTCCTTCCTCGGCCATGGAAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR CAA 90 bp | ATCATGATGCCCTTATGGCTTGTGTATGCCTATGAGGCACAGAGGCAGGAGGTAATATTTATAGAAAGATaGTGGCCTGGCTCTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: IMMPLWLVYAYEAQRQEVIFIER*WPGSQH Trigger: ATGCTGAGAGCCAGGCCACAATCTTTCTATAAATAT...TACCTCCTGCCTCTGTGCCTCATAGGCATACACAAGCCATAAGGGCATCATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR GCA 72 bp | AAAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTaGTCAAAACTCTCCAAATACAAGAGGTTGAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: KTAAPRLHLLPV*SKLSKYKRLRV Trigger: TACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR CCA 72 bp | AACATCTCTTCTCATCTGAAAATCATGATGCCCTTATaGCTTGTGTATGCCTATGAGGCACAGAGGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NISSHLKIMMPL*LVYAYEAQRQE Trigger: CTCCTGCCTCTGTGCCTCATAGGCATACACAAGCCATAAGGGCATCATGATTTTCAGATGAGAAGAGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR TCA 72 bp | AAGATTGTGGCCTGGCTCTCAGCATTTAGTAGGCACTaGAGCCTAGTGAGTTCTCAGATGTGTTGTTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: KIVAWLSAFSRH*SLVSSQMCCLN Trigger: ATTCAAACAACACATCTGAGAACTCACTAGGCTTCAGTGCCTACTAAATGCTGAGAGCCAGGCCACAATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR GCA 72 bp | ATGGACATTTCTGATTTGTTGGTTTCGGTCTATAGGTaGTGGTTGAAGAACAGAGCTCAGAGAGAAACAGTC | + |
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Preference number: 3 (lower is better) Translates to: MDISDLLVSVYR*WLKNRAQRETV Trigger: GACTGTTTCTCTCTGAGCTCTGTTCTTCAACCAGCACCTATAGACCGAAACCAACAAATCAGAAATGTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR CCA 72 bp | ATGGCATCTCTTCCAGTAATATTTATAGAAAGATTGTaGCCTGGCTCTCAGCATTTAGTAGGCACTGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: MASLPVIFIERL*PGSQHLVGTEA Trigger: GGCTTCAGTGCCTACTAAATGCTGAGAGCCAGGCCACAATCTTTCTATAAATATTACTGGAAGAGATGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR CCA 72 bp | GACATTTCTGATTTGTTGGTTTCGGTCTATAGGTGCTaGTTGAAGAACAGAGCTCAGAGAGAAACAGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: DISDLLVSVYRC*LKNRAQRETVL Trigger: TAGGACTGTTTCTCTCTGAGCTCTGTTCTTCAACCAGCACCTATAGACCGAAACCAACAAATCAGAAATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR-3UTR CAA 90 bp | GAACTTCTGATCCTATTTTTACCTCTTAATATTGGGATTGCAGGAGCACACCACAGTGTGATTCTCAAGTaGATTGTCACAGGCAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: ELLILFLPLNIGIAGAHHSVILK*IVTGKG Trigger: ACCCTTGCCTGTGACAATCAACTTGAGAATCACACT...GTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAAAAATAGGATCAGAAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GGCTGCGAGCAGATCAGTGTGATTCTCAAGTTGATTGTCACAGGCAAGGGTGGGTGGAGACCAGCTGGCTaGTCTGGTCGCAGCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GCEQISVILKLIVTGKGGWRPAG*SGRSSQ Trigger: CTGTGAGCTGCGACCAGAGCAGCCAGCTGGTCTCCA...CCCACCCTTGCCTGTGACAATCAACTTGAGAATCACACTGATCTGCTCGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCTCATTTCCACCTCAGTCATGGAGACCAGCTaGCTGCTCTGGTCGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSSSRDVSQVHLLLISTSVMETS*LLWSQL Trigger: GAGCTGCGACCAGAGCAGCCAGCTGGTCTCCATGAC...TGAGGTGGAAATGAGGAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCTCATTTCCACCTCACCGGGTTCAGGGTCATaGAGACCAGCTGGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSSSRDVSQVHLLLISTSPGSGS*RPAGCS Trigger: AGAGCAGCCAGCTGGTCTCCATGACCCTGAACCCGG...TGAGGTGGAAATGAGGAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GGAAAAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAGCTATAGCACCCACTaGCAGCACCAGACCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GKTAAPRLHLLPVCSKLSSYSTH*QHQTQG Trigger: CCCCTGGGTCTGGTGCTGGCAGTGGGTGCTATAGCT...GGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GGGCTGCGAGCAGATCAGTGTGATTCTCAAGTTGATTGTCACAGGCAAGGGTGGGGCAACTCAGGAACCTaGCTGACCTCCAGGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: GLRADQCDSQVDCHRQGWGNSGT*LTSRLT Trigger: TGTCAGCCTGGAGGTCAGCCAGGTTCCTGAGTTGCC...CCACCCTTGCCTGTGACAATCAACTTGAGAATCACACTGATCTGCTCGCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | AGCCCCTATTGTGAACCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCCTGCCCTCAAAGTCTaGATCCCTCTTCCCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SPYCEPSSSRDVSQVHLLPALKV*IPLPQG Trigger: ACCCTGGGGAAGAGGGATCCAGACTTTGAGGGCAGG...GAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGGTTCACAATAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | AGCCCCTATTGTGAACCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCATGGGCCAGCCTTCTTaGGGCAAACCAGAACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SPYCEPSSSRDVSQVHLLMGQPS*GKPELW Trigger: CCACAGTTCTGGTTTGCCTCAAGAAGGCTGGCCCAT...GAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGGTTCACAATAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GGGCTGCGAGCAGATCAGTGTGATTCTCAAGTTGATTGTCACAGGCAAGGGTGGGCCAGCATCCCCAGATaGTCTGTTCTCCTGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GLRADQCDSQVDCHRQGWASIPR*SVLLSL Trigger: CAAGCTCAGGAGAACAGAGCATCTGGGGATGCTGGC...CCACCCTTGCCTGTGACAATCAACTTGAGAATCACACTGATCTGCTCGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCTCATTTCCACCTCAACAGGCCTCGGTTACTaGTACCCAGGCCACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: PSSSRDVSQVHLLLISTSTGLGY*YPGHTC Trigger: ACAAGTGTGGCCTGGGTACCAGTAACCGAGGCCTGT...TGAGGTGGAAATGAGGAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | AGCCCCTATTGTGAACCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCACCAGCTGGCTGCTCTaGTCGCAGCTCACAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SPYCEPSSSRDVSQVHLLTSWLL*SQLTED Trigger: ATCTTCTGTGAGCTGCGACCAGAGCAGCCAGCTGGT...GAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGGTTCACAATAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR CAA 72 bp | AGTGTGGGCTGCGAGCAGATCAGTGTGATTCTCAAGTaGATTGTCACAGGCAAGGGTGGGTGGTCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SVGCEQISVILK*IVTGKGGWSAL Trigger: CAGTGCTGACCACCCACCCTTGCCTGTGACAATCAACTTGAGAATCACACTGATCTGCTCGCAGCCCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | GCTCCCTCCTCCTGCTTCTTTGAATCCAAGTCTCAATGTATCCCAGGCTGGCCTTTGCATCTGTTGGGTTaGCATGGGATGACCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: APSSCFFESKSQCIPGWPLHLLG*HGMTLW Trigger: CCAGAGGGTCATCCCATGTCAACCCAACAGATGCAA...AGGCCAGCCTGGGATACATTGAGACTTGGATTCAAAGAAGCAGGAGGAGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | GCTCCCTCCTCCTGCTTCTTTGAATCCAAGTCTCAATGTATCCCAGGCTGGCCTGATGCTCTGTTCTCCTaGGCTTGGTCTCCCACATTC | + |
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Preference number: 4 (lower is better) Translates to: APSSCFFESKSQCIPGWPDALFS*AWSPTF Trigger: GAATGTGGGAGACCAAGCTCAGGAGAACAGAGCATC...AGGCCAGCCTGGGATACATTGAGACTTGGATTCAAAGAAGCAGGAGGAGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | AGCCCCTATTGTGAACCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCAGTATTTCCGGGTGTaGCGGTTGACAGAGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SPYCEPSSSRDVSQVHLLQYFRV*RLTEVS Trigger: AGACACCTCTGTCAACCGGCACACCCGGAAATACTG...GAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGGTTCACAATAGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | CCCTTATATGAGGTCCACATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAAACACTGGTAGTGCCCTaGATCCTCCTTCCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLYEVHMSDRKGKGETRKTLVVP*ILLPQA Trigger: GGCCTGAGGAAGGAGGATGCAGGGCACTACCAGTGT...TTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCATGTGGACCTCATATAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | CCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCTCATTTCCACCTCACCTGTGCAGCTATGGTaGTGGACTGAAGCAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: PSSSRDVSQVHLLLISTSPVQLW*WTEAGM Trigger: CATTCCTGCTTCAGTCCAGCACCATAGCTGCACAGG...TGAGGTGGAAATGAGGAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GGAAAAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCGTGCAGCTATGGTGCTaGACTGAAGCAGGAATGCCG | + |
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Preference number: 4 (lower is better) Translates to: GKTAAPRLHLLPVCSKLSVQLWC*TEAGMP Trigger: CGGCATTCCTGCTTCAGTCCAGCACCATAGCTGCAC...GGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | CCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCTCATTTCCACCTCAGGAGAGGTAGCCATTTaGAGAGATGAGCGTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PSSSRDVSQVHLLLISTSGEVAI*RDERCA Trigger: TGCACAACGCTCATCTCTTCAAATGGCTACCTCTCC...TGAGGTGGAAATGAGGAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | AGCCCCTATTGTGAACCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCTGTCCTGTAGCTGCTaGTTGACATGCGGTCTACAT | + |
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Preference number: 4 (lower is better) Translates to: SPYCEPSSSRDVSQVHLLLSCSC*LTCGLH Trigger: ATGTAGACCGCATGTCAATCAGCAGCTACAGGACAG...GAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGGTTCACAATAGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GGAAAAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCTTTGTCCATCAGCACTaGCAGCATCCCCAGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: GKTAAPRLHLLPVCSKLSFVHQH*QHPQML Trigger: GAGCATCTGGGGATGCTGGCAGTGCTGATGGACAAA...GGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | ATCATGATGCCCTTATGGCTTGTGTATGCCTATGAGGCACAGAGGCAGGAGGTAGGCTGCTGCTTTCCTTaGGGTTATAGGGACAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: IMMPLWLVYAYEAQRQEVGCCFP*GYRDRR Trigger: TCGCCTGTCCCTATAACCCCAAGGAAAGCAGCAGCC...TACCTCCTGCCTCTGTGCCTCATAGGCATACACAAGCCATAAGGGCATCATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GCTCCCTCCTCCTGCTTCTTTGAATCCAAGTCTCAATGTATCCCAGGCTGGCCTCATGGGATGACCCTCTaGTCCTCTCTTCAACTGCTA | + |
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Preference number: 4 (lower is better) Translates to: APSSCFFESKSQCIPGWPHGMTL*SSLQLL Trigger: TAGCAGTTGAAGAGAGGACCAGAGGGTCATCCCATG...AGGCCAGCCTGGGATACATTGAGACTTGGATTCAAAGAAGCAGGAGGAGGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | CCTCCTCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCAGCGACACCAGTACTTaGGGCTGCTGCTTTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PPHFHLTLFIEKRTPHTLSDTST*GCCFPW Trigger: CCAAGGAAAGCAGCAGCCTCAAGTACTGGTGTCGCT...GAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GCTCCCTCCTCCTGCTTCTTTGAATCCAAGTCTCAATGTATCCCAGGCTGGCCTTGTGGCAACCCTTGTTaGTCCACTTGCACCAGTATT | + |
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Preference number: 4 (lower is better) Translates to: APSSCFFESKSQCIPGWPCGNPC*STCTSI Trigger: AATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACA...AGGCCAGCCTGGGATACATTGAGACTTGGATTCAAAGAAGCAGGAGGAGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | CCTCCTCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCTGGAGCTGGAGCTCCTaGTTTGTCCATCAGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: PPHFHLTLFIEKRTPHTLWSWSS*FVHQHC Trigger: GCAGTGCTGATGGACAAAGCAGGAGCTCCAGCTCCA...GAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | AAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAAATGGACCTTCTCCAGCTTaGCAGATGTACAGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KQLLPGSIFYLSAQNSPNGPSPA*QMYSPA Trigger: TGCTGGGCTGTACATCTGCCAAGCTGGAGAAGGTCC...ATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | GGCTGCGAGCAGATCAGTGTGATTCTCAAGTTGATTGTCACAGGCAAGGGTGGGTTTTGTGGAGACCCCTaGAAAGACAGTTACCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GCEQISVILKLIVTGKGGFCGDP*KDSYQE Trigger: CTCTTGGTAACTGTCTTTTCAGGGGTCTCCACAAAA...CCCACCCTTGCCTGTGACAATCAACTTGAGAATCACACTGATCTGCTCGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | AAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAAATCTGGGTAGTAGCACGTaGTGGAAACAGAGTCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KQLLPGSIFYLSAQNSPNLGSST*WKQSRL Trigger: AAGGCGACTCTGTTTCCATCACGTGCTACTACCCAG...ATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | TTACCTCTTAATATTGGGATTGCAGGAGCACACCACCATGCTCCTTTAACTCATTCCGGGTGTGCCGGTTaGCAGAGGTGTCTGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LPLNIGIAGAHHHAPLTHSGCAG*QRCLGS Trigger: ACTACCCAGACACCTCTGTCAACCGGCACACCCGGA...ATGAGTTAAAGGAGCATGGTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | ATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTGTCTTTTTGCCACAGAGCCTCCTGTaGCTCCCTTCACAACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSDRKGKGETRKDPFVFLPQSLL*LPSQQS Trigger: GCTCTGTTGTGAAGGGAGTCACAGGAGGCTCTGTGG...CAAAAAGACAAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CCTCCTCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCGGCCATTGTCATCCTTaGGGGTTATCAGGATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPHFHLTLFIEKRTPHTLGHCHP*GLSGSC Trigger: GCAGGATCCTGATAACCCCCAAGGATGACAATGGCC...GAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GAGGTCCACATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTCTTCCAGAGCGACTTTaGCACGTGCATTTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVHMSDRKGKGETRKDPFLPERL*HVHLHL Trigger: CAGATGCAAATGCACGTGCCAAAGTCGCTCTGGAAG...AAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCATGTGGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTGTCTTTTTGTCTGGGGTTATCAGGATCCTaGCCTCAAAGTCTGGATCCC | + |
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Preference number: 4 (lower is better) Translates to: VTGRGKVRPGKIHLSFCLGLSGS*PQSLDP Trigger: GGGATCCAGACTTTGAGGGCAGGATCCTGATAACCC...CAGACAAAAAGACAAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | CCCTTATATGAGGTCCACATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAATCATTGACAAAGAGTTaGCAAGTCTGGATGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLYEVHMSDRKGKGETRKSLTKS*QVWMGQ Trigger: CTGGCCCATCCAGACTTGGCAACTCTTTGTCAATGA...TTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCATGTGGACCTCATATAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CCTCCTCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCGTTGACAGAGGTGTCTaGGTAGTAGCACGTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPHFHLTLFIEKRTPHTLVDRGV*VVARDG Trigger: TCCATCACGTGCTACTACCCAGACACCTCTGTCAAC...GAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CCCTTATATGAGGTCCACATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAATCAGGCGCTAGCACCTaGAGGTCAACATTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLYEVHMSDRKGKGETRKSGAST*RSTFFL Trigger: TAAGAAGAATGTTGACCTCCAGGTGCTAGCGCCTGA...TTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCATGTGGACCTCATATAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GCTCCCTCCTCCTGCTTCTTTGAATCCAAGTCTCAATGTATCCCAGGCTGGCCTAAAAGGCCCGGGATTTaGAATGGCTTTGTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: APSSCFFESKSQCIPGWPKRPGI*NGFVLF Trigger: AAAGAGAACAAAGCCATTCCAAATCCCGGGCCTTTT...AGGCCAGCCTGGGATACATTGAGACTTGGATTCAAAGAAGCAGGAGGAGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | ATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTGTCTTTTTGGAGGTTGGCTCTGCCTaGATACTCCTTGGAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MSDRKGKGETRKDPFVFLEVGSA*ILLGEV Trigger: TACCTCTCCAAGGAGTATTCAGGCAGAGCCAACCTC...CAAAAAGACAAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CCTCCTCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCATACTACTCACCTCCTaGGGACCAAATATGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPHFHLTLFIEKRTPHTLILLTS*GPNMGL Trigger: AAGCCCCATATTTGGTCCCCAGGAGGTGAGTAGTAT...GAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | TTACCTCTTAATATTGGGATTGCAGGAGCACACCACCATGCTCCTTTAACTCATCGTCACCTCAAGGTTTaGCTCCCTTGTAGCTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLNIGIAGAHHHAPLTHRHLKV*LPCSFG Trigger: GCCGAAGCTACAAGGGAGCCAAACCTTGAGGTGACG...ATGAGTTAAAGGAGCATGGTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GTAATATTTATAGAAAGATTGTGGCCTGGCTCTCAGCATTTAGTAGGCACTGAACCTTCATACTCTTCTTaGACCTGGGCCTGGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIFIERLWPGSQHLVGTEPSYSS*TWAWVP Trigger: GGGGACCCAGGCCCAGGTGCAAGAAGAGTATGAAGG...TTCAGTGCCTACTAAATGCTGAGAGCCAGGCCACAATCTTTCTATAAATATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | TTACCTCTTAATATTGGGATTGCAGGAGCACACCACCATGCTCCTTTAACTCATCCTGGGGACCAAATATaGGGCTTTTTGTGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLNIGIAGAHHHAPLTHPGDQI*GFLWRP Trigger: GGGTCTCCACAAAAAGCCCCATATTTGGTCCCCAGG...ATGAGTTAAAGGAGCATGGTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GAACTTCTGATCCTATTTTTACCTCTTAATATTGGGATTGCAGGAGCACACCACCAGCTCACAGAAGATTaGCGGGCACCTTCGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLILFLPLNIGIAGAHHQLTED*RAPSSW Trigger: CCATGACGAAGGTGCCCGCCAATCTTCTGTGAGCTG...GTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAAAAATAGGATCAGAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | TCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCTCCTATGGAGAACAGCACTTTaGAGCTGGAGCTCCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SFPPHSLHREKNASHSLLWRTAL*SWSSCF Trigger: AAAGCAGGAGCTCCAGCTCCAAAGTGCTGTTCTCCA...TAGGAGAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | ACCTGTCTGCTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCTTAAGCCATTTGAAGAGATaGGCGTTGTGCACATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TCLLKTLQIQEVESIFPLSHLKR*ALCTCR Trigger: GCGGCATGTGCACAACGCTCATCTCTTCAAATGGCT...TAAGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GAACTTCTGATCCTATTTTTACCTCTTAATATTGGGATTGCAGGAGCACACCACCTCCCAGTGTCGTCCTaGGTGAGCTGCTCAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ELLILFLPLNIGIAGAHHLPVSS*VSCSML Trigger: TAACATTGAGCAGCTCACCCAGGACGACACTGGGAG...GTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAAAAATAGGATCAGAAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCAATGTATCCCAGGCTGGCCTTAAACTCCCTAGGTAGCCAAGGATTAACATTCAAAAGTCACTaGGGACCTCAGGTCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: QVSMYPRLALNSLGSQGLTFKSH*GPQVFI Trigger: TATAAAGACCTGAGGTCCTCAGTGACTTTTGAATGT...TAATCCTTGGCTACCTAGGGAGTTTAAGGCCAGCCTGGGATACATTGAGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | TTACCTCTTAATATTGGGATTGCAGGAGCACACCACCATGCTCCTTTAACTCATCCTGGGAGTAGAATTTaGACGGATAGTGGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLNIGIAGAHHHAPLTHPGSRI*TDSGRK Trigger: TTTCCTGCCACTATCCGTGCAAATTCTACTCCCAGG...ATGAGTTAAAGGAGCATGGTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | ATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTGTCTTTTTGGGTCCTCTCTTCAACTaGTATATAGATGGCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSDRKGKGETRKDPFVFLGPLFN*YIDGGS Trigger: ACTACCGCCATCTATATAGCAGTTGAAGAGAGGACC...CAAAAAGACAAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | ATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTGTCTTTTTGGGAGTTCTTGAAGTCTaGCATGCTAATGTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSDRKGKGETRKDPFVFLGVLEV*HANVCP Trigger: AGGACAGACATTAGCATGGCAGACTTCAAGAACTCC...CAAAAAGACAAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GTAATATTTATAGAAAGATTGTGGCCTGGCTCTCAGCATTTAGTAGGCACTGAATCCGGCACAGATATTTaGCCTCGTTTGCCACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VIFIERLWPGSQHLVGTESGTDI*PRLPPH Trigger: GTGAGGTGGCAAACGAGGCCAAATATCTGTGCCGGA...TTCAGTGCCTACTAAATGCTGAGAGCCAGGCCACAATCTTTCTATAAATATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GAACTTCTGATCCTATTTTTACCTCTTAATATTGGGATTGCAGGAGCACACCACCCTGGAGTTCTATTGTaGTTCTCCAGCGAGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLILFLPLNIGIAGAHHPGVLL*FSSESH Trigger: GTGACTCTCGCTGGAGAACCACAATAGAACTCCAGG...GTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAAAAATAGGATCAGAAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | GTAATATTTATAGAAAGATTGTGGCCTGGCTCTCAGCATTTAGTAGGCACTGAACCCCCATGTTGTCATTaGCTCCCAAATCTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIFIERLWPGSQHLVGTEPPCCH*LPNLWS Trigger: ACTCCAGAGATTTGGGAGGCAATGACAACATGGGGG...TTCAGTGCCTACTAAATGCTGAGAGCCAGGCCACAATCTTTCTATAAATATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CTACCTGTCTGCTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCTTGCCTGAATACTCCTTaGAGAGGTAGCCATTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVCSKLSKYKRLRVSFPCLNTP*RGSHLK Trigger: CTTCAAATGGCTACCTCTCCAAGGAGTATTCAGGCA...AGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CTACCTGTCTGCTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCTAAATGTGTTGTTCTCTaGGAAGTTGATGAGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVCSKLSKYKRLRVSFPKCVVL*EVDEVG Trigger: GCCAACCTCATCAACTTCCCAGAGAACAACACATTT...AGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | GAACTTCTGATCCTATTTTTACCTCTTAATATTGGGATTGCAGGAGCACACCACGCCCGGGATTTGGAATaGCTTTGTTCTCTTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLILFLPLNIGIAGAHHARDLE*LCSLFH Trigger: GTGAAAAAGAGAACAAAGCCATTCCAAATCCCGGGC...GTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAAAAATAGGATCAGAAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | TGCCTGGTAATGATGTCTTATCTTAATGAAAAGACAGAATCTGGGAGGAGATGGACCTTTTTGCTTTCTTaGATTCTTCTGGCTCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVMMSYLNEKTESGRRWTFLLS*ILLAQR Trigger: CCGCTGAGCCAGAAGAATCCAAGAAAGCAAAAAGGT...CCATCTCCTCCCAGATTCTGTCTTTTCATTAAGATAAGACATCATTACCAGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CCA 90 bp | CTACCTGTCTGCTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCTTGTCAGCTTCCTCCTTaGATGACCTTTTTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVCSKLSKYKRLRVSFPCQLPP*MTFLLS Trigger: AGAAAGCAAAAAGGTCATCCAAGGAGGAAGCTGACA...AGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR CAA 72 bp | GAGATGGCATCTCTTCCAGTAATATTTATAGAAAGATaGTGGCCTGGCTCTCAGCATTTAGTAGGCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EMASLPVIFIER*WPGSQHLVGTE Trigger: TTCAGTGCCTACTAAATGCTGAGAGCCAGGCCACAATCTTTCTATAAATATTACTGGAAGAGATGCCATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| 3UTR CAA 72 bp | ACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTaGTCTTTTTGTCTGTCTGTCTTTCTTCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGRGKVRPGKIH*SFCLSVFLLLL Trigger: AAGAAGAAGAAGAAAGACAGACAGACAAAAAGACAAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR GCA 90 bp | TGCCTGGTAATGATGTCTTATCTTAATGAAAAGACAGAATCTGGGAGGAGATGGCAATGGTCACATTTCTaGCTATGTCCTTTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLVMMSYLNEKTESGRRWQWSHF*LCPLCR Trigger: TCTACACAAAGGACATAGGCAGAAATGTGACCATTG...CCATCTCCTCCCAGATTCTGTCTTTTCATTAAGATAAGACATCATTACCAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | CTGCCAGCACCAGACCCAGGGGCACCAGGGTGGAGAACAGCACTTTaGAGCTGGAGCTCCTGCTTTGTCCATCAGCACTGCCAGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPAPDPGAPGWRTAL*SWSSCFVHQHCQHP Trigger: GGGATGCTGGCAGTGCTGATGGACAAAGCAGGAGCTCCAGCTCCAAAGTGCTGTTCTCCACCCTGGTGCCCCTGGGTCTGGTGCTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 90 bp | GGCCTTGCTTTACCCCACACCAGTACCAGCCTTCATCTTCCTTACTaGCCGGGTTCAGGGTCATGGAGACCAGCTGGCTGCTCTGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLALPHTSTSLHLPY*PGSGSWRPAGCSGR Trigger: GCGACCAGAGCAGCCAGCTGGTCTCCATGACCCTGAACCCGGTCAGTAAGGAAGATGAAGGCTGGTACTGGTGTGGGGTAAAGCAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | CTGCTCTGGTCGCAGCTCACAGAAGATTGGCGGGCACCTTCGTCATaGCTTGGCAGGATGTGGCAACCCTTGTTGCTCCACTTGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLWSQLTEDWRAPSS*LGRMWQPLLLHLHQ Trigger: CTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAGGTGCCCGCCAATCTTCTGTGAGCTGCGACCAGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | CCTTCATCTTCCTTACTGACCGGGTTCAGGGTCATGGAGACCAGCTaGCTGCTCTGGTCGCAGCTCACAGAAGATTGGCGGGCACCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PSSSLLTGFRVMETS*LLWSQLTEDWRAPS Trigger: CGAAGGTGCCCGCCAATCTTCTGTGAGCTGCGACCAGAGCAGCCAGCTGGTCTCCATGACCCTGAACCCGGTCAGTAAGGAAGATGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS GCA 90 bp | TTCTTGAGGCAAACCAGAACTGTGGGCTCCACACTGGTAGTGCCCTaGATCCTCCTTCCTCAGGCCTGTGATCAACACACTGAAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLRQTRTVGSTLVVP*ILLPQACDQHTEAA Trigger: GGCCGCTTCAGTGTGTTGATCACAGGCCTGAGGAAGGAGGATGCAGGGCACTACCAGTGTGGAGCCCACAGTTCTGGTTTGCCTCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS GCA 90 bp | GGCGGGCACCTTCGTCATGGCTTGGCAGGATGTGGCAACCCTTGTTaGTCCACTTGCACCAGTATTTCTCCTGGGAGTAGAATTTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GGHLRHGLAGCGNPC*STCTSISPGSRICT Trigger: CGTGCAAATTCTACTCCCAGGAGAAATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAGGTGCCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS GCA 90 bp | AGAACAGCACTTTGGAGCTGGAGCTCCTGCTTTGTCCATCAGCACTaGCAGCATCCCCAGATGCTCTGTTCTCCTGAGCTTGGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTALWSWSSCFVHQH*QHPQMLCSPELGLP Trigger: TGGGAGACCAAGCTCAGGAGAACAGAGCATCTGGGGATGCTGGCAGTGCTGATGGACAAAGCAGGAGCTCCAGCTCCAAAGTGCTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | CTCACAGAAGATTGGCGGGCACCTTCGTCATGGCTTGGCAGGATGTaGCAACCCTTGTTGCTCCACTTGCACCAGTATTTCTCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTEDWRAPSSWLGRM*QPLLLHLHQYFSWE Trigger: CTCCCAGGAGAAATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAGGTGCCCGCCAATCTTCTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | CTGGTCGCAGCTCACAGAAGATTGGCGGGCACCTTCGTCATGGCTTaGCAGGATGTGGCAACCCTTGTTGCTCCACTTGCACCAGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: LVAAHRRLAGTFVMA*QDVATLVAPLAPVF Trigger: AAATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAGGTGCCCGCCAATCTTCTGTGAGCTGCGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS GCA 90 bp | GTTGAGGATGACAGTGTAAGTACCATTGCCTGGCTGATCAAACAGTaGCAGTCGGCCTTCATACTCTTCTTGCACCTGGGCCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VEDDSVSTIAWLIKQ*QSAFILFLHLGLGP Trigger: GGGACCCAGGCCCAGGTGCAAGAAGAGTATGAAGGCCGACTGGCACTGTTTGATCAGCCAGGCAATGGTACTTACACTGTCATCCTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS GCA 90 bp | GCTGGAGCTCCTGCTTTGTCCATCAGCACTGCCAGCATCCCCAGATaGTCTGTTCTCCTGAGCTTGGTCTCCCACATTCTGTATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGAPALSISTASIPR*SVLLSLVSHILYLS Trigger: AGAGAGATACAGAATGTGGGAGACCAAGCTCAGGAGAACAGAGCATCTGGGGATGCTGGCAGTGCTGATGGACAAAGCAGGAGCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | GAGGTCCACATGAGTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTGCCTTCATACTCTTCTaGCACCTGGGCCTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVHMSDRKGKGETRKDPFAFILF*HLGLGP Trigger: GGGACCCAGGCCCAGGTGCAAGAAGAGTATGAAGGC...AAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCACTCATGTGGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 90 bp | TGGCTCTGCCTGAATACTCCTTGGAGAGGTAGCCATTTGAAGAGATaGGCGTTGTGCACATGCCGCTGGCTCCTTGTCGGCACCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: WLCLNTPWRGSHLKR*ALCTCRWLLVGTSI Trigger: AATACTGGTGCCGACAAGGAGCCAGCGGCATGTGCACAACGCTCATCTCTTCAAATGGCTACCTCTCCAAGGAGTATTCAGGCAGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS-3UTR CAA 90 bp | CCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCCTCATTTCCACCTCATCCATAGGTCTGGCCTaGCTTTACCCCACACCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSSSRDVSQVHLLLISTSSIGLA*LYPTPV Trigger: TACTGGTGTGGGGTAAAGCAAGGCCAGACCTATGGA...TGAGGTGGAAATGAGGAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS GCA 90 bp | CTTCGTCATGGCTTGGCAGGATGTGGCAACCCTTGTTGCTCCACTTaGACCAGTATTTCTCCTGGGAGTAGAATTTGCACGGATAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRHGLAGCGNPCCST*TSISPGSRICTDSG Trigger: GCCACTATCCGTGCAAATTCTACTCCCAGGAGAAATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | TTGTCGGCACCAGTATTTCCGGGTGTGCCGGTTGACAGAGGTGTCTaGGTAGTAGCACGTGATGGAAACAGAGTCGCCTTCTATACTACT | + |
|
Preference number: 5 (lower is better) Translates to: LSAPVFPGVPVDRGV*VVARDGNRVAFYTT Trigger: AGTAGTATAGAAGGCGACTCTGTTTCCATCACGTGCTACTACCCAGACACCTCTGTCAACCGGCACACCCGGAAATACTGGTGCCGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS CCA 90 bp | CTCGGTGGTGAGCTGGTTGAGGATGACAGTGTAAGTACCATTGCCTaGCTGATCAAACAGTGCCAGTCGGCCTTCATACTCTTCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGGELVEDDSVSTIA*LIKQCQSAFILFLH Trigger: GTGCAAGAAGAGTATGAAGGCCGACTGGCACTGTTTGATCAGCCAGGCAATGGTACTTACACTGTCATCCTCAACCAGCTCACCACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 90 bp | ATTTCTCCTGGGAGTAGAATTTGCACGGATAGTGGCAGGAAACGGTaGAGGTCTCTCCTAGTACTGCTGTTGCGTTCTGTGGCGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ISPGSRICTDSGRKR*RSLLVLLLRSVASP Trigger: AGGTGACGCCACAGAACGCAACAGCAGTACTAGGAGAGACCTTCACCGTTTCCTGCCACTATCCGTGCAAATTCTACTCCCAGGAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 90 bp | GTTCTTGAAGTCTGCCATGCTAATGTCTGTCCTGTAGCTGCTGATTaGCATGCGGTCTACATTCTTCCGATGTCGGACTCTGGCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLEVCHANVCPVAAD*HAVYILPMSDSGHP Trigger: TGGGTGGCCAGAGTCCGACATCGGAAGAATGTAGACCGCATGTCAATCAGCAGCTACAGGACAGACATTAGCATGGCAGACTTCAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | GCCATTGTCATCCTTGGGGGTTATCAGGATCCTGCCCTCAAAGTCTaGATCCCTCTTCCCCAGGGTGTTAATGATCACATCACAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AIVILGGYQDPALKV*IPLPQGVNDHITGF Trigger: GAAACCTGTGATGTGATCATTAACACCCTGGGGAAGAGGGATCCAGACTTTGAGGGCAGGATCCTGATAACCCCCAAGGATGACAATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | GGAAAAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCTTGTTCTCTGGGAAGTaGATGAGGTTGGCTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GKTAAPRLHLLPVCSKLSLFSGK*MRLALP Trigger: AGGCAGAGCCAACCTCATCAACTTCCCAGAGAACAA...GGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTATTGTGAACCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCGGAGCATTCTCCCTTTaGAAAGGGCATTCAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPYCEPSSSRDVSQVHLLGAFSL*KGHSMV Trigger: GACCATTGAATGCCCTTTCAAAAGGGAGAATGCTCC...GAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGGTTCACAATAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 90 bp | TGGCAAAAGGCCCGGGATTTGGAATGGCTTTGTTCTCTTTTTCACTaGTGGAGGAGTCCACTACCTCTTCTTCCAGAGCGACTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WQKARDLEWLCSLFH*WRSPLPLLPERLWH Trigger: GTGCCAAAGTCGCTCTGGAAGAAGAGGTAGTGGACTCCTCCATCAGTGAAAAAGAGAACAAAGCCATTCCAAATCCCGGGCCTTTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS GCA 90 bp | CACTCCGTGGTAGTCACGATTTCATCTTTTCCTTCGATGACTGTTTaGTGTGTGTCTGGAGAGGCCCCCATGTTGTCATTGCCTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSVVVTISSFPSMTV*CVSGEAPMLSLPPK Trigger: TTTGGGAGGCAATGACAACATGGGGGCCTCTCCAGACACACAGCAAACAGTCATCGAAGGAAAAGATGAAATCGTGACTACCACGGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS-3UTR CAA 90 bp | AAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAAATATCCGGCACAGATATTaGGCCTCGTTTGCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KQLLPGSIFYLSAQNSPNIRHRY*ASFATS Trigger: TGAGGTGGCAAACGAGGCCAAATATCTGTGCCGGAT...ATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS-3UTR CAA 90 bp | GTGACAGGAAGGGGAAAGGTGAGACCAGGAAAGATCCATTTGTCTTTTTGTCTGCAGCGACACCAGTACTaGAGGCTGCTGCTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTGRGKVRPGKIHLSFCLQRHQY*RLLLSL Trigger: CAAGGAAAGCAGCAGCCTCAAGTACTGGTGTCGCTG...CAGACAAAAAGACAAATGGATCTTTCCTGGTCTCACCTTTCCCCTTCCTGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS-3UTR CAA 90 bp | AAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAAATCCCTTGTTGCTCCACTaGCACCAGTATTTCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQLLPGSIFYLSAQNSPNPLLLH*HQYFSW Trigger: CCAGGAGAAATACTGGTGCAAGTGGAGCAACAAGGG...ATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | AAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAAATTCCTTCGATGACTGTTaGCTGTGTGTCTGGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KQLLPGSIFYLSAQNSPNSFDDC*LCVWRG Trigger: GCCTCTCCAGACACACAGCAAACAGTCATCGAAGGA...ATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS TCA 90 bp | CTTCTTCCAGAGCGACTTTGGCACGTGCATTTGCATCTGTTGGGTTaGCATGGGATGACCCTCTGGTCCTCTCTTCAACTGCTATATAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPERLWHVHLHLLG*HGMTLWSSLQLLYR Trigger: TCTATATAGCAGTTGAAGAGAGGACCAGAGGGTCATCCCATGTCAACCCAACAGATGCAAATGCACGTGCCAAAGTCGCTCTGGAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | ATCATGATGCCCTTATGGCTTGTGTATGCCTATGAGGCACAGAGGCAGGAGGTAGTTCGCAGGACTGGTTaGTCTTCTTACACAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: IMMPLWLVYAYEAQRQEVVRRTG*SSYTGI Trigger: AATCCCTGTGTAAGAAGACAAACCAGTCCTGCGAAC...TACCTCCTGCCTCTGTGCCTCATAGGCATACACAAGCCATAAGGGCATCATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS-3UTR CAA 90 bp | ATCATGATGCCCTTATGGCTTGTGTATGCCTATGAGGCACAGAGGCAGGAGGTATTCATTGACAAAGAGTaGCCAAGTCTGGATGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IMMPLWLVYAYEAQRQEVFIDKE*PSLDGP Trigger: TGGCCCATCCAGACTTGGCAACTCTTTGTCAATGAA...TACCTCCTGCCTCTGTGCCTCATAGGCATACACAAGCCATAAGGGCATCATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | AAACAGCTGCTCCCAGGCTCCATCTTCTACCTGTCTGCTCAAAACTCTCCAAATATGTGGCAACCCTTGTaGCTCCACTTGCACCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KQLLPGSIFYLSAQNSPNMWQPL*LHLHQY Trigger: ATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACAT...ATTTGGAGAGTTTTGAGCAGACAGGTAGAAGATGGAGCCTGGGAGCAGCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | AGCCCCTATTGTGAACCCTCTTCCTCCAGAGATGTCTCTCAGGTTCACCTCCTCAAATCTCTGGAGTTCTaGAAGTCTGCCATGCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SPYCEPSSSRDVSQVHLLKSLEF*KSAMLM Trigger: CATTAGCATGGCAGACTTCAAGAACTCCAGAGATTT...GAGGAGGTGAACCTGAGAGACATCTCTGGAGGAAGAGGGTTCACAATAGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS-3UTR CAA 90 bp | GGCTGCGAGCAGATCAGTGTGATTCTCAAGTTGATTGTCACAGGCAAGGGTGGGCCTTGGATGACCTTTTaGCTTTCTTGGATTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCEQISVILKLIVTGKGGPWMTF*LSWILL Trigger: CAGAAGAATCCAAGAAAGCAAAAAGGTCATCCAAGG...CCCACCCTTGCCTGTGACAATCAACTTGAGAATCACACTGATCTGCTCGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS CCA 90 bp | AGTCACGATTTCATCTTTTCCTTCGATGACTGTTTGCTGTGTGTCTaGAGAGGCCCCCATGTTGTCATTGCCTCCCAAATCTCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHDFIFSFDDCLLCV*RGPHVVIASQISGV Trigger: AACTCCAGAGATTTGGGAGGCAATGACAACATGGGGGCCTCTCCAGACACACAGCAAACAGTCATCGAAGGAAAAGATGAAATCGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | TTACCTCTTAATATTGGGATTGCAGGAGCACACCACCATGCTCCTTTAACTCATGATGGGCCAGCCTTCTaGAGGCAAACCAGAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPLNIGIAGAHHHAPLTHDGPAF*RQTRTV Trigger: CACAGTTCTGGTTTGCCTCAAGAAGGCTGGCCCATC...ATGAGTTAAAGGAGCATGGTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | TTACCTCTTAATATTGGGATTGCAGGAGCACACCACCATGCTCCTTTAACTCATGTGGAGAACAGCACTTaGGAGCTGGAGCTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPLNIGIAGAHHHAPLTHVENST*ELELLL Trigger: AAGCAGGAGCTCCAGCTCCAAAGTGCTGTTCTCCAC...ATGAGTTAAAGGAGCATGGTGGTGTGCTCCTGCAATCCCAATATTAAGAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 90 bp | TGTTCTCCTGAGCTTGGTCTCCCACATTCTGTATCTCTCTTTCGTTaGCAAAAGGCCCGGGATTTGGAATGGCTTTGTTCTCTTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSPELGLPHSVSLFR*QKARDLEWLCSLFH Trigger: GTGAAAAAGAGAACAAAGCCATTCCAAATCCCGGGCCTTTTGCCAACGAAAGAGAGATACAGAATGTGGGAGACCAAGCTCAGGAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | TGCCTGGTAATGATGTCTTATCTTAATGAAAAGACAGAATCTGGGAGGAGATGGGCCCCCATGTTGTCATaGCCTCCCAAATCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLVMMSYLNEKTESGRRWAPMLS*PPKSLE Trigger: CTCCAGAGATTTGGGAGGCAATGACAACATGGGGGC...CCATCTCCTCCCAGATTCTGTCTTTTCATTAAGATAAGACATCATTACCAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | TCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCTCCTAGACCTTTTTGCTTTCTaGGATTCTTCTGGCTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SFPPHSLHREKNASHSLLDLFAF*DSSGSA Trigger: CGCTGAGCCAGAAGAATCCAAGAAAGCAAAAAGGTC...TAGGAGAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | TCATTTCCACCTCACTCTCTTCATAGAGAAAAGAACGCCTCACACTCTCTCCTAATGGTAGACTCTTCATaGACAAAGAGTTGCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFPPHSLHREKNASHSLLMVDSS*TKSCQV Trigger: GACTTGGCAACTCTTTGTCAATGAAGAGTCTACCAT...TAGGAGAGAGTGTGAGGCGTTCTTTTCTCTATGAAGAGAGTGAGGTGGAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS-3UTR CAA 90 bp | ACCTGTCTGCTCAAAACTCTCCAAATACAAGAGGTTGAGAGTATCTTTCCCTTATTAATCACAAATGTGTaGTTCTCTGGGAAGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TCLLKTLQIQEVESIFPLLITNV*FSGKLM Trigger: CATCAACTTCCCAGAGAACAACACATTTGTGATTAA...TAAGGGAAAGATACTCTCAACCTCTTGTATTTGGAGAGTTTTGAGCAGACAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 90 bp | ACTGCCAGCACCAGACCCAGGGGCACCAGGGTGGAGAACAGCACTTaGGAGCTGGAGCTCCTGCTTTGTCCATCAGCACTGCCAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TASTRPRGTRVENST*ELELLLCPSALPAS Trigger: GGATGCTGGCAGTGCTGATGGACAAAGCAGGAGCTCCAGCTCCAAAGTGCTGTTCTCCACCCTGGTGCCCCTGGGTCTGGTGCTGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | TCCTTACTGACCGGGTTCAGGGTCATGGAGACCAGCTaGCTGCTCTGGTCGCAGCTCACAGAAGATTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLLTGFRVMETS*LLWSQLTEDWR Trigger: CCGCCAATCTTCTGTGAGCTGCGACCAGAGCAGCCAGCTGGTCTCCATGACCCTGAACCCGGTCAGTAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | AGGCTTCCTGGGGACCATCGTGGACCTGTGCAGCTATaGTGCTGGACTGAAGCAGGAATGCCGAGTAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLPGDHRGPVQL*CWTEAGMPSRP Trigger: TGGCCTACTCGGCATTCCTGCTTCAGTCCAGCACCATAGCTGCACAGGTCCACGATGGTCCCCAGGAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | CTGATCAAACAGTGCCAGTCGGCCTTCATACTCTTCTaGCACCTGGGCCTGGGTCCCCACAAGCACGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LIKQCQSAFILF*HLGLGPHKHGA Trigger: TGCCCCGTGCTTGTGGGGACCCAGGCCCAGGTGCAAGAAGAGTATGAAGGCCGACTGGCACTGTTTGATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 72 bp | GTCCATTTCCGTCCCCTTCCCAGCGACACCAGTACTTaGGGCTGCTGCTTTCCTTGGGGTTATAGGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VHFRPLPSDTST*GCCFPWGYRDR Trigger: CCTGTCCCTATAACCCCAAGGAAAGCAGCAGCCTCAAGTACTGGTGTCGCTGGGAAGGGGACGGAAATGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 72 bp | TTACCCCACACCAGTACCAGCCTTCATCTTCCTTACTaGCCGGGTTCAGGGTCATGGAGACCAGCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPHTSTSLHLPY*PGSGSWRPAGC Trigger: GCAGCCAGCTGGTCTCCATGACCCTGAACCCGGTCAGTAAGGAAGATGAAGGCTGGTACTGGTGTGGGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 90 bp | TCTGGTCGCAGCTCACAGAAGATTGGCGGGCACCTTCGTCATGGCTaGGCAGGATGTGGCAACCCTTGTTGCTCCACTTGCACCAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: SGRSSQKIGGHLRHG*AGCGNPCCSTCTSI Trigger: AATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAGGTGCCCGCCAATCTTCTGTGAGCTGCGACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | CCAGTATTTCCGGGTGTGCCGGTTGACAGAGGTGTCTaGGTAGTAGCACGTGATGGAAACAGAGTCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PVFPGVPVDRGV*VVARDGNRVAF Trigger: GAAGGCGACTCTGTTTCCATCACGTGCTACTACCCAGACACCTCTGTCAACCGGCACACCCGGAAATACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS CCA 72 bp | GATTGGCGGGCACCTTCGTCATGGCTTGGCAGGATGTaGCAACCCTTGTTGCTCCACTTGCACCAGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: DWRAPSSWLGRM*QPLLLHLHQYF Trigger: GAAATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAGGTGCCCGCCAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | GCACCTTCGTCATGGCTTGGCAGGATGTGGCAACCCTaGTTGCTCCACTTGCACCAGTATTTCTCCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: APSSWLGRMWQP*LLHLHQYFSWE Trigger: CTCCCAGGAGAAATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS CAA 90 bp | GCATCCTCCTTCCTCAGGCCTGTGATCAACACACTGAAGCGGCCATaGTCATCCTTGGGGGTTATCAGGATCCTGCCCTCAAAGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASSFLRPVINTLKRP*SSLGVIRILPSKSG Trigger: TCCAGACTTTGAGGGCAGGATCCTGATAACCCCCAAGGATGACAATGGCCGCTTCAGTGTGTTGATCACAGGCCTGAGGAAGGAGGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS CAA 90 bp | CTCTTCATTGACAAAGAGTTGCCAAGTCTGGATGGGCCAGCCTTCTaGAGGCAAACCAGAACTGTGGGCTCCACACTGGTAGTGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LFIDKELPSLDGPAF*RQTRTVGSTLVVPC Trigger: GCAGGGCACTACCAGTGTGGAGCCCACAGTTCTGGTTTGCCTCAAGAAGGCTGGCCCATCCAGACTTGGCAACTCTTTGTCAATGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS TCA 72 bp | CTGAATACTCCTTGGAGAGGTAGCCATTTGAAGAGATaGGCGTTGTGCACATGCCGCTGGCTCCTTGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LNTPWRGSHLKR*ALCTCRWLLVG Trigger: GCCGACAAGGAGCCAGCGGCATGTGCACAACGCTCATCTCTTCAAATGGCTACCTCTCCAAGGAGTATTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
||
| CDS CAA 72 bp | TTCCTCAGGCCTGTGATCAACACACTGAAGCGGCCATaGTCATCCTTGGGGGTTATCAGGATCCTGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLRPVINTLKRP*SSLGVIRILPS Trigger: TGAGGGCAGGATCCTGATAACCCCCAAGGATGACAATGGCCGCTTCAGTGTGTTGATCACAGGCCTGAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS CAA 72 bp | GACAAAGAGTTGCCAAGTCTGGATGGGCCAGCCTTCTaGAGGCAAACCAGAACTGTGGGCTCCACACTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DKELPSLDGPAF*RQTRTVGSTLV Trigger: TACCAGTGTGGAGCCCACAGTTCTGGTTTGCCTCAAGAAGGCTGGCCCATCCAGACTTGGCAACTCTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS CAA 90 bp | TTCCTCAGGCCTGTGATCAACACACTGAAGCGGCCATTGTCATCCTaGGGGGTTATCAGGATCCTGCCCTCAAAGTCTGGATCCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLRPVINTLKRPLSS*GVIRILPSKSGSLF Trigger: GAAGAGGGATCCAGACTTTGAGGGCAGGATCCTGATAACCCCCAAGGATGACAATGGCCGCTTCAGTGTGTTGATCACAGGCCTGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS TCA 72 bp | TGCCACCTCACGGCCCAGGTCACATTCAAAAGTCACTaGGGACCTCAGGTCTTTATAAAGCAGCTCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CHLTAQVTFKSH*GPQVFIKQLWL Trigger: GAGCCAGAGCTGCTTTATAAAGACCTGAGGTCCTCAGTGACTTTTGAATGTGACCTGGGCCGTGAGGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS GCA 72 bp | CTTCGTCATGGCTTGGCAGGATGTGGCAACCCTTGTTaGTCCACTTGCACCAGTATTTCTCCTGGGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRHGLAGCGNPC*STCTSISPGSR Trigger: TCTACTCCCAGGAGAAATACTGGTGCAAGTGGAGCAACAAGGGTTGCCACATCCTGCCAAGCCATGACGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
||
| CDS CAA 72 bp | CCTGTGATCAACACACTGAAGCGGCCATTGTCATCCTaGGGGGTTATCAGGATCCTGCCCTCAAAGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVINTLKRPLSS*GVIRILPSKSG Trigger: TCCAGACTTTGAGGGCAGGATCCTGATAACCCCCAAGGATGACAATGGCCGCTTCAGTGTGTTGATCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 90 bp | ATGGCCACAGAGCCTCCTGTGACTCCCTTCACAACAGAGCGACGATaGGGAATGGTAGACTCTTCATTGACAAAGAGTTGCCAAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: MATEPPVTPFTTERR*GMVDSSLTKSCQVW Trigger: CCAGACTTGGCAACTCTTTGTCAATGAAGAGTCTACCATTCCCAATCGTCGCTCTGTTGTGAAGGGAGTCACAGGAGGCTCTGTGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 72 bp | GGGAGTAGAATTTGCACGGATAGTGGCAGGAAACGGTaGAGGTCTCTCCTAGTACTGCTGTTGCGTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSRICTDSGRKR*RSLLVLLLRSV Trigger: CACAGAACGCAACAGCAGTACTAGGAGAGACCTTCACCGTTTCCTGCCACTATCCGTGCAAATTCTACTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | CATCACAGGTTTCCTTATTCATCCGGCACAGATATTTaGCCTCGTTTGCCACCTCACGGCCCAGGTCACATT | + |
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Preference number: 6 (lower is better) Translates to: HHRFPYSSGTDI*PRLPPHGPGHI Trigger: AATGTGACCTGGGCCGTGAGGTGGCAAACGAGGCCAAATATCTGTGCCGGATGAATAAGGAAACCTGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | ATCCTTGGGGGTTATCAGGATCCTGCCCTCAAAGTCTaGATCCCTCTTCCCCAGGGTGTTAATGATCACATC | + |
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Preference number: 6 (lower is better) Translates to: ILGGYQDPALKV*IPLPQGVNDHI Trigger: GATGTGATCATTAACACCCTGGGGAAGAGGGATCCAGACTTTGAGGGCAGGATCCTGATAACCCCCAAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | GAGCTGGTTGAGGATGACAGTGTAAGTACCATTGCCTaGCTGATCAAACAGTGCCAGTCGGCCTTCATACTC | + |
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Preference number: 6 (lower is better) Translates to: ELVEDDSVSTIA*LIKQCQSAFIL Trigger: GAGTATGAAGGCCGACTGGCACTGTTTGATCAGCCAGGCAATGGTACTTACACTGTCATCCTCAACCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | ACATCACAGGTTTCCTTATTCATCCGGCACAGATATTaGGCCTCGTTTGCCACCTCACGGCCCAGGTCACAT | + |
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Preference number: 6 (lower is better) Translates to: TSQVSLFIRHRY*ASFATSRPRSH Trigger: ATGTGACCTGGGCCGTGAGGTGGCAAACGAGGCCAAATATCTGTGCCGGATGAATAAGGAAACCTGTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | AGAGCGACTTTGGCACGTGCATTTGCATCTGTTGGGTaGACATGGGATGACCCTCTGGTCCTCTCTTCAACT | + |
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Preference number: 6 (lower is better) Translates to: RATLARAFASVG*TWDDPLVLSST Trigger: AGTTGAAGAGAGGACCAGAGGGTCATCCCATGTCAACCCAACAGATGCAAATGCACGTGCCAAAGTCGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | ATGGAGGAGTCCACTACCTCTTCTTCCAGAGCGACTTaGGCACGTGCATTTGCATCTGTTGGGTTGACATGG | + |
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Preference number: 6 (lower is better) Translates to: MEESTTSSSRAT*ARAFASVGLTW Trigger: CCATGTCAACCCAACAGATGCAAATGCACGTGCCAAAGTCGCTCTGGAAGAAGAGGTAGTGGACTCCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 72 bp | GCCCGGGATTTGGAATGGCTTTGTTCTCTTTTTCACTaGTGGAGGAGTCCACTACCTCTTCTTCCAGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: ARDLEWLCSLFH*WRSPLPLLPER Trigger: TCGCTCTGGAAGAAGAGGTAGTGGACTCCTCCATCAGTGAAAAAGAGAACAAAGCCATTCCAAATCCCGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 72 bp | GTCTGCCATGCTAATGTCTGTCCTGTAGCTGCTGATTaGCATGCGGTCTACATTCTTCCGATGTCGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: VCHANVCPVAAD*HAVYILPMSDS Trigger: AGAGTCCGACATCGGAAGAATGTAGACCGCATGTCAATCAGCAGCTACAGGACAGACATTAGCATGGCAGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | GAGCCTCCTGTGACTCCCTTCACAACAGAGCGACGATaGGGAATGGTAGACTCTTCATTGACAAAGAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: EPPVTPFTTERR*GMVDSSLTKSC Trigger: GCAACTCTTTGTCAATGAAGAGTCTACCATTCCCAATCGTCGCTCTGTTGTGAAGGGAGTCACAGGAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | ATGTCAGCTTCCTCCTTGGATGACCTTTTTGCTTTCTaGGATTCTTCTGGCTCAGCGGTGCACTCCGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: MSASSLDDLFAF*DSSGSAVHSVV Trigger: TACCACGGAGTGCACCGCTGAGCCAGAAGAATCCAAGAAAGCAAAAAGGTCATCCAAGGAGGAAGCTGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | AGTAGGCCATGTCAGCTTCCTCCTTGGATGACCTTTTaGCTTTCTTGGATTCTTCTGGCTCAGCGGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: SRPCQLPPWMTF*LSWILLAQRCT Trigger: AGTGCACCGCTGAGCCAGAAGAATCCAAGAAAGCAAAAAGGTCATCCAAGGAGGAAGCTGACATGGCCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 90 bp | CCAGTGTCGTCCTGGGTGAGCTGCTCAATGTTAATCACAAATGTGTaGTTCTCTGGGAAGTTGATGAGGTTGGCTCTGCCTGAATACTCC | + |
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Preference number: 6 (lower is better) Translates to: PVSSWVSCSMLITNV*FSGKLMRLALPEYS Trigger: GGAGTATTCAGGCAGAGCCAACCTCATCAACTTCCCAGAGAACAACACATTTGTGATTAACATTGAGCAGCTCACCCAGGACGACACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS CCA 72 bp | ACATTCTTCTTATCAGCACTAGGACCTTCTCCAGCTTaGCAGATGTACAGCCCAGCATCATTGTGCGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: TFFLSALGPSPA*QMYSPASLCVR Trigger: CCTAACGCACAATGATGCTGGGCTGTACATCTGCCAAGCTGGAGAAGGTCCTAGTGCTGATAAGAAGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | ACTTTGGCACGTGCATTTGCATCTGTTGGGTTGACATaGGATGACCCTCTGGTCCTCTCTTCAACTGCTATA | + |
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Preference number: 6 (lower is better) Translates to: TLARAFASVGLT*DDPLVLSSTAI Trigger: TATAGCAGTTGAAGAGAGGACCAGAGGGTCATCCCATGTCAACCCAACAGATGCAAATGCACGTGCCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CCA 72 bp | GAGCTTGGTCTCCCACATTCTGTATCTCTCTTTCGTTaGCAAAAGGCCCGGGATTTGGAATGGCTTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ELGLPHSVSLFR*QKARDLEWLCS Trigger: AGAACAAAGCCATTCCAAATCCCGGGCCTTTTGCCAACGAAAGAGAGATACAGAATGTGGGAGACCAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | ACGATTGGGAATGGTAGACTCTTCATTGACAAAGAGTaGCCAAGTCTGGATGGGCCAGCCTTCTTGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: TIGNGRLFIDKE*PSLDGPAFLRQ Trigger: TTGCCTCAAGAAGGCTGGCCCATCCAGACTTGGCAACTCTTTGTCAATGAAGAGTCTACCATTCCCAATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | TATATAGATGGCGGTAGTTTCTCCATAGGTCTGGCCTaGCTTTACCCCACACCAGTACCAGCCTTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: YIDGGSFSIGLA*LYPTPVPAFIF Trigger: GAAGATGAAGGCTGGTACTGGTGTGGGGTAAAGCAAGGCCAGACCTATGGAGAAACTACCGCCATCTATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | CTTTCGTTGGCAAAAGGCCCGGGATTTGGAATGGCTTaGTTCTCTTTTTCACTGATGGAGGAGTCCACTACC | + |
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Preference number: 6 (lower is better) Translates to: LSLAKGPGFGMA*FSFSLMEESTT Trigger: GGTAGTGGACTCCTCCATCAGTGAAAAAGAGAACAAAGCCATTCCAAATCCCGGGCCTTTTGCCAACGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 90 bp | TTCAACTGCTATATAGATGGCGGTAGTTTCTCCATAGGTCTGGCCTaGCTTTACCCCACACCAGTACCAGCCTTCATCTTCCTTACTGAC | + |
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Preference number: 6 (lower is better) Translates to: FNCYIDGGSFSIGLA*LYPTPVPAFIFLTD Trigger: GTCAGTAAGGAAGATGAAGGCTGGTACTGGTGTGGGGTAAAGCAAGGCCAGACCTATGGAGAAACTACCGCCATCTATATAGCAGTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 90 bp | TTAATGATCACATCACAGGTTTCCTTATTCATCCGGCACAGATATTaGGCCTCGTTTGCCACCTCACGGCCCAGGTCACATTCAAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LMITSQVSLFIRHRY*ASFATSRPRSHSKV Trigger: GACTTTTGAATGTGACCTGGGCCGTGAGGTGGCAAACGAGGCCAAATATCTGTGCCGGATGAATAAGGAAACCTGTGATGTGATCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS GCA 72 bp | GTAGTCACGATTTCATCTTTTCCTTCGATGACTGTTTaGTGTGTGTCTGGAGAGGCCCCCATGTTGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: VVTISSFPSMTV*CVSGEAPMLSL Trigger: CAATGACAACATGGGGGCCTCTCCAGACACACAGCAAACAGTCATCGAAGGAAAAGATGAAATCGTGACTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS CAA 72 bp | TCGCAGGACTGGTTTGTCTTCTTACACAGGGATTTCTaGCTGGGAGCATTCTCCCTTTTGAAAGGGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: SQDWFVFLHRDF*LGAFSLLKGHS Trigger: TGAATGCCCTTTCAAAAGGGAGAATGCTCCCAGCAAGAAATCCCTGTGTAAGAAGACAAACCAGTCCTGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS CCA 72 bp | ACCTTCTCAGTAGAGTCAATGACAAGTTCGCAGGACTaGTTTGTCTTCTTACACAGGGATTTCTTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: TFSVESMTSSQD*FVFLHRDFLLG Trigger: TCCCAGCAAGAAATCCCTGTGTAAGAAGACAAACCAGTCCTGCGAACTTGTCATTGACTCTACTGAGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS CCA 72 bp | CTGTATCTCTCTTTCGTTGGCAAAAGGCCCGGGATTTaGAATGGCTTTGTTCTCTTTTTCACTGATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LYLSFVGKRPGI*NGFVLFFTDGG Trigger: TCCTCCATCAGTGAAAAAGAGAACAAAGCCATTCCAAATCCCGGGCCTTTTGCCAACGAAAGAGAGATACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027675.14 |
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| CDS TCA 72 bp | TACACAGGGATTTCTTGCTGGGAGCATTCTCCCTTTTaGAAGGGCATTCAATGGTCACATTTCTGCCTATGT | + |
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Preference number: 6 (lower is better) Translates to: YTGISCWEHSPF*KGIQWSHFCLC Trigger: ACATAGGCAGAAATGTGACCATTGAATGCCCTTTCAAAAGGGAGAATGCTCCCAGCAAGAAATCCCTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS CAA 72 bp | TTACACAGGGATTTCTTGCTGGGAGCATTCTCCCTTTaGAAAGGGCATTCAATGGTCACATTTCTGCCTATG | + |
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Preference number: 6 (lower is better) Translates to: LHRDFLLGAFSL*KGHSMVTFLPM Trigger: CATAGGCAGAAATGTGACCATTGAATGCCCTTTCAAAAGGGAGAATGCTCCCAGCAAGAAATCCCTGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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| CDS CAA 72 bp | TCAATGTTAATCACAAATGTGTTGTTCTCTGGGAAGTaGATGAGGTTGGCTCTGCCTGAATACTCCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SMLITNVLFSGK*MRLALPEYSLE Trigger: CTCCAAGGAGTATTCAGGCAGAGCCAACCTCATCAACTTCCCAGAGAACAACACATTTGTGATTAACATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027675.14 ENSMUST00000133792.8 ENSMUST00000137782.2 |
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