Pregenerated sensors for PIGL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014245Ensembl transcript IDs: ENSMUST00000014389.6
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTTGGGGTGACCCATCCTTCATGTGGTCCCTGTTTGGCAGACGCTaGTTTGCTGGGGTTTCCCTGGGTCAGGCAGGTAAATCAGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: GWGDPSFMWSLFGRR*FAGVSLGQAGKSAQ Trigger: TTGGGCTGATTTACCTGCCTGACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATGAAGGATGGGTCACCCCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 90 bp | AACTCTTTGGCTCATGGGCTCTTTCTGACTGACTGCCTTTGCCTTTaGGATGCAGCGGGATGCCCCTCACCGCGGTCATGTAGAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: NSLAHGLFLTDCLCL*DAAGCPSPRSCRGC Trigger: GCAGCCTCTACATGACCGCGGTGAGGGGCATCCCGCTGCATCTCAAAGGCAAAGGCAGTCAGTCAGAAAGAGCCCATGAGCCAAAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CCA 90 bp | TTTCCTCAGAAGAGGAAGCTGGGTTGGGGTGACCCATCCTTCATGTaGTCCCTGTTTGGCAGACGCTGCTTTGCTGGGGTTTCCCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: FPQKRKLGWGDPSFM*SLFGRRCFAGVSLG Trigger: ACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATGAAGGATGGGTCACCCCAACCCAGCTTCCTCTTCTGAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 90 bp | GCGTGGCTTTGTTCTAAAGGAACTCTTTGGCTCATGGGCTCTTTCTaGCTGACTGCCTTTGCCTTTGAGATGCAGCGGGATGCCCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: AWLCSKGTLWLMGSF*LTAFAFEMQRDAPH Trigger: GTGAGGGGCATCCCGCTGCATCTCAAAGGCAAAGGCAGTCAGTCAGAAAGAGCCCATGAGCCAAAGAGTTCCTTTAGAACAAAGCCACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 90 bp | TTCAGAACTGTGATCCAAGAAAACCGCAGCTCTGCAGATGCCCTGTaGGCGGTGTTTCAGCTACAGGAACAGAAGACTGACCAAAACAGC | + |
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Preference number: 1 (lower is better) Translates to: FRTVIQENRSSADAL*AVFQLQEQKTDQNS Trigger: GCTGTTTTGGTCAGTCTTCTGTTCCTGTAGCTGAAACACCGCTCACAGGGCATCTGCAGAGCTGCGGTTTTCTTGGATCACAGTTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR GCA 90 bp | GGCACATTTACACACATTTGTGGTAAAGACAACTTCCCTAGGCTTTaGTGGATGTCTGGTGCAAACTCTGTTATCATGCAAACTATTGGT | + |
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Preference number: 1 (lower is better) Translates to: GTFTHICGKDNFPRL*WMSGANSVIMQTIG Trigger: ACCAATAGTTTGCATGATAACAGAGTTTGCACCAGACATCCAGCAAAGCCTAGGGAAGTTGTCTTTACCACAAATGTGTGTAAATGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CCA 90 bp | ACATTTACACACATTTGTGGTAAAGACAACTTCCCTAGGCTTTGCTaGATGTCTGGTGCAAACTCTGTTATCATGCAAACTATTGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: TFTHICGKDNFPRLC*MSGANSVIMQTIGK Trigger: TTTACCAATAGTTTGCATGATAACAGAGTTTGCACCAGACATCCAGCAAAGCCTAGGGAAGTTGTCTTTACCACAAATGTGTGTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CAA 90 bp | GGGGTGACCCATCCTTCATGTGGTCCCTGTTTGGCAGACGCTGCTTaGCTGGGGTTTCCCTGGGTCAGGCAGGTAAATCAGCCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GVTHPSCGPCLADAA*LGFPWVRQVNQPKA Trigger: GGCTTTGGGCTGATTTACCTGCCTGACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATGAAGGATGGGTCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCAGCTCCTACTGTGAAAAGGCAGAGAACCAAGGTGTTTATTGGCTCCTTCTGTTTGGCAGACGCTaGTTTGCTGGGGTTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GPSSYCEKAENQGVYWLLLFGRR*FAGVSL Trigger: CAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAG...AAGGAGCCAATAAACACCTTGGTTCTCTGCCTTTTCACAGTAGGAGCTGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGGTAAAGACAACTTCCCTAGGCTTTGCTGGATGTCTGGTGCAAACTCTGCATGTGGTCCCTGTTTaGCAGACGCTGCTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FVVKTTSLGFAGCLVQTLHVVPV*QTLLCW Trigger: CCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATG...CAGAGTTTGCACCAGACATCCAGCAAAGCCTAGGGAAGTTGTCTTTACCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CCA 90 bp | AACTCTGTTATCATGCAAACTATTGGTAAATTAGTGGGGTGGCTACTATTGTGTCAGACGCTGCTTTGCTaGGGTTTCCCTGGGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: NSVIMQTIGKLVGWLLLCQTLLC*GFPGSG Trigger: GCCTGACCCAGGGAAACCCCAGCAAAGCAGCGTCTG...ACACAATAGTAGCCACCCCACTAATTTACCAATAGTTTGCATGATAACAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGGTGTGGGCCCAGCTCCTACTGTGAAAAGGCAGAGAACCAAGGTGTTTTTTGGCTGTGTCCCCTaGAATTCATGTGTCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: YKGVGPAPTVKRQRTKVFFGCVP*NSCVFR Trigger: TCTGAAGACACATGAATTCCAGGGGACACAGCCAAA...AAACACCTTGGTTCTCTGCCTTTTCACAGTAGGAGCTGGGCCCACACCTTTATA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR GCA 90 bp | CTCACTATGTTGACCAGGCTGGCCACAAACTTAGAGATATCCACAAGTCTCTGTTTGCTGGATGTCTGGTaGAAACTCTGTTATCATGCA | + |
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Preference number: 2 (lower is better) Translates to: LTMLTRLATNLEISTSLCLLDVW*KLCYHA Trigger: TGCATGATAACAGAGTTTGCACCAGACATCCAGCAA...ACAGAGACTTGTGGATATCTCTAAGTTTGTGGCCAGCCTGGTCAACATAGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CCA 90 bp | AACTCTGTTATCATGCAAACTATTGGTAAATTAGTGGGGTGGCTACTATTGTGTCTCAGAAGAGGAAGCTaGGTTGGGGTGACCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: NSVIMQTIGKLVGWLLLCLRRGS*VGVTHP Trigger: AGGATGGGTCACCCCAACCCAGCTTCCTCTTCTGAG...ACACAATAGTAGCCACCCCACTAATTTACCAATAGTTTGCATGATAACAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CCA 90 bp | TACAGGAACAGAAGACTGACCAAAACAGCCTGGTCTGGAAACCATGTAAACATCGGTAAATTAGTGGGGTaGCTACTATTGTGTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: YRNRRLTKTAWSGNHVNIGKLVG*LLLCWC Trigger: ACACCAACACAATAGTAGCCACCCCACTAATTTACC...GATGTTTACATGGTTTCCAGACCAGGCTGTTTTGGTCAGTCTTCTGTTCCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CAA 90 bp | GGATGCCCCTCACCGCGGTCATGTAGAGGCTGCTATGCTCTTGGACTTCACAGGTTGGCAGACGCTGCTTaGCTGGGGTTTCCCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: GCPSPRSCRGCYALGLHRLADAA*LGFPWV Trigger: GACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAA...CCTGTGAAGTCCAAGAGCATAGCAGCCTCTACATGACCGCGGTGAGGGGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | GCTCATGGGCTCTTTCTGACTGACTGCCTTTGCCTTTaGGATGCAGCGGGATGCCCCTCACCGCGGTCATGT | + |
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Preference number: 3 (lower is better) Translates to: AHGLFLTDCLCL*DAAGCPSPRSC Trigger: ACATGACCGCGGTGAGGGGCATCCCGCTGCATCTCAAAGGCAAAGGCAGTCAGTCAGAAAGAGCCCATGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | GGCAGGTTTTCCTCAGAAGAGGAAGCTGGGTTGGGGTaGCCCATCCTTCATGTGGTCCCTGTTTGGCAGACG | + |
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Preference number: 3 (lower is better) Translates to: GRFSSEEEAGLG*PILHVVPVWQT Trigger: CGTCTGCCAAACAGGGACCACATGAAGGATGGGTCACCCCAACCCAGCTTCCTCTTCTGAGGAAAACCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR GCA 72 bp | GACCCATCCTTCATGTGGTCCCTGTTTGGCAGACGCTaGTTTGCTGGGGTTTCCCTGGGTCAGGCAGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: DPSFMWSLFGRR*FAGVSLGQAGK Trigger: TTTACCTGCCTGACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATGAAGGATGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CCA 72 bp | TTTCCCTGGGTCAGGCAGGTAAATCAGCCCAAAGCCTaGCCAGACGACTTCTTGCTCTGCTTCTCCCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: FPWVRQVNQPKA*PDDFLLCFSLL Trigger: CAAGAGGGAGAAGCAGAGCAAGAAGTCGTCTGGCCAGGCTTTGGGCTGATTTACCTGCCTGACCCAGGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | GTGATCCAAGAAAACCGCAGCTCTGCAGATGCCCTGTaGGCGGTGTTTCAGCTACAGGAACAGAAGACTGAC | + |
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Preference number: 3 (lower is better) Translates to: VIQENRSSADAL*AVFQLQEQKTD Trigger: GTCAGTCTTCTGTTCCTGTAGCTGAAACACCGCTCACAGGGCATCTGCAGAGCTGCGGTTTTCTTGGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | CTAAAGGAACTCTTTGGCTCATGGGCTCTTTCTGACTaGCTGCCTTTGCCTTTGAGATGCAGCGGGATGCCC | + |
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Preference number: 3 (lower is better) Translates to: LKELFGSWALSD*LPLPLRCSGMP Trigger: GGGCATCCCGCTGCATCTCAAAGGCAAAGGCAGTCAGTCAGAAAGAGCCCATGAGCCAAAGAGTTCCTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR GCA 72 bp | AGGCTTCAGAACTGTGATCCAAGAAAACCGCAGCTCTaGAGATGCCCTGTGAGCGGTGTTTCAGCTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: RLQNCDPRKPQL*RCPVSGVSATG Trigger: TCCTGTAGCTGAAACACCGCTCACAGGGCATCTGCAGAGCTGCGGTTTTCTTGGATCACAGTTCTGAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CAA 90 bp | CTGGATGAACCTGTGCTAGGGTTTGGCTGTGTCCCCTGGAATTCATGTGTCTTCGAGGCTGCTATGCTCTaGGACTTCACAGGCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LDEPVLGFGCVPWNSCVFEAAML*DFTGFR Trigger: TCTGAAGCCTGTGAAGTCCAAGAGCATAGCAGCCTC...GAAGACACATGAATTCCAGGGGACACAGCCAAACCCTAGCACAGGTTCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | CTGCTATGCTCTTGGACTTCACAGGCTTCAGAACTGTaGTCCAAGAAAACCGCAGCTCTGCAGATGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LLCSWTSQASEL*SKKTAALQMPC Trigger: ACAGGGCATCTGCAGAGCTGCGGTTTTCTTGGATCACAGTTCTGAAGCCTGTGAAGTCCAAGAGCATAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR GCA 72 bp | CAGAACTGTGATCCAAGAAAACCGCAGCTCTGCAGATaGCCTGTGAGCGGTGTTTCAGCTACAGGAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: QNCDPRKPQLCR*PVSGVSATGTE Trigger: TTCTGTTCCTGTAGCTGAAACACCGCTCACAGGGCATCTGCAGAGCTGCGGTTTTCTTGGATCACAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGTGGTAAAGACAACTTCCCTAGGCTTTGCTGGATGTCTGGTGCAAACTCTGTGGCCAGACGACTTCTaGCTCTGCTTCTCCCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: FVVKTTSLGFAGCLVQTLWPDDF*LCFSLL Trigger: CAAGAGGGAGAAGCAGAGCAAGAAGTCGTCTGGCCA...CAGAGTTTGCACCAGACATCCAGCAAAGCCTAGGGAAGTTGTCTTTACCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | TGTTCTAAAGGAACTCTTTGGCTCATGGGCTCTTTCTaGCTGACTGCCTTTGCCTTTGAGATGCAGCGGGAT | + |
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Preference number: 3 (lower is better) Translates to: CSKGTLWLMGSF*LTAFAFEMQRD Trigger: ATCCCGCTGCATCTCAAAGGCAAAGGCAGTCAGTCAGAAAGAGCCCATGAGCCAAAGAGTTCCTTTAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR-3UTR CAA 90 bp | AACAGAAGACTGACCAAAACAGCCTGGTCTGGAAACCATGTAAACATCACACCTGGTGTAGGCTTGGTTTaGGCAGGTTTTCCTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NRRLTKTAWSGNHVNITPGVGLV*AGFPQK Trigger: CTTCTGAGGAAAACCTGCCAAAACCAAGCCTACACC...AGGTGTGATGTTTACATGGTTTCCAGACCAGGCTGTTTTGGTCAGTCTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTAATGAGATCTaGTGCCCTCTTCTGGAGTGTCTGAAGATAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTICNEI*CPLLECLKIAT Trigger: TGTAGCTATCTTCAGACACTCCAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | GGAATTCATGTGTCTTCAGAGCCCCAGTGTTTAGGGTaGGGCCTTTTGGAAGTGACAGGGTTATTTGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: GIHVSSEPQCLG*GLLEVTGLFVV Trigger: TACAACAAATAACCCTGTCACTTCCAAAAGGCCTCACCCTAAACACTGGGGCTCTGAAGACACATGAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CCA 72 bp | TTCAGCTACAGGAACAGAAGACTGACCAAAACAGCCTaGTCTGGAAACCATGTAAACATCACACCTGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: FSYRNRRLTKTA*SGNHVNITPVN Trigger: GTTCACAGGTGTGATGTTTACATGGTTTCCAGACCAGGCTGTTTTGGTCAGTCTTCTGTTCCTGTAGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR TCA 72 bp | AGTATATATATAAAGGTGTGGGCCCAGCTCCTACTGTaGAAAGGCAGAGAACCAAGGTGTTTATTGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SIYIKVWAQLLL*KGREPRCLLAP Trigger: AGGAGCCAATAAACACCTTGGTTCTCTGCCTTTTCACAGTAGGAGCTGGGCCCACACCTTTATATATATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR GCA 72 bp | ACACACATTTGTGGTAAAGACAACTTCCCTAGGCTTTaGTGGATGTCTGGTGCAAACTCTGTTATCATGCAA | + |
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Preference number: 3 (lower is better) Translates to: THICGKDNFPRL*WMSGANSVIMQ Trigger: TTGCATGATAACAGAGTTTGCACCAGACATCCAGCAAAGCCTAGGGAAGTTGTCTTTACCACAAATGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CCA 72 bp | CACATTTGTGGTAAAGACAACTTCCCTAGGCTTTGCTaGATGTCTGGTGCAAACTCTGTTATCATGCAAACT | + |
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Preference number: 3 (lower is better) Translates to: HICGKDNFPRLC*MSGANSVIMQT Trigger: AGTTTGCATGATAACAGAGTTTGCACCAGACATCCAGCAAAGCCTAGGGAAGTTGTCTTTACCACAAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CCA 72 bp | TCTGTTATCATGCAAACTATTGGTAAATTAGTGGGGTaGCTACTATTGTGTTGGTGTAGGCTTGGTTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: SVIMQTIGKLVG*LLLCWCRLGFG Trigger: GCCAAAACCAAGCCTACACCAACACAATAGTAGCCACCCCACTAATTTACCAATAGTTTGCATGATAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR TCA 90 bp | CCTGGCCAGACGACTTCTTGCTCTGCTTCTCCCTCTTGTTCTGAGGGTCTGACCAGGCAGCTTCCCTCCTaGGTGCAGGGCCCTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: PGQTTSCSASPSCSEGLTRQLPS*VQGPHS Trigger: GCTGTGAGGGCCCTGCACTCAGGAGGGAAGCTGCCT...GGTCAGACCCTCAGAACAAGAGGGAGAAGCAGAGCAAGAAGTCGTCTGGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTCACCGCGGTCATGTAGAGGCTGCTATGCTCTTGGACTTCACAGGCTTCTGTGCTGAAGGAGGGTaGTGGCCACGAGCTCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: APHRGHVEAAMLLDFTGFCAEGG*WPRAPC Trigger: ACACGGAGCTCGTGGCCAGCACCCTCCTTCAGCACA...GAAGCCTGTGAAGTCCAAGAGCATAGCAGCCTCTACATGACCGCGGTGAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR GCA 90 bp | TTCATGTGGTCCCTGTTTGGCAGACGCTGCTTTGCTGGGGTTTCCCTGGGTCAGACCAGAGGAGCTGGCTaGGGTGGCAGGACATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FMWSLFGRRCFAGVSLGQTRGAG*GGRTWL Trigger: AAGCCATGTCCTGCCACCGCAGCCAGCTCCTCTGGT...CTGACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTCACCGCGGTCATGTAGAGGCTGCTATGCTCTTGGACTTCACAGGCTTCAGCTCCGTGTCCCACTaGACTTCTGGATCATCCGGA | + |
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Preference number: 4 (lower is better) Translates to: APHRGHVEAAMLLDFTGFSSVSH*TSGSSG Trigger: TCCGGATGATCCAGAAGTGCAGTGGGACACGGAGCT...GAAGCCTGTGAAGTCCAAGAGCATAGCAGCCTCTACATGACCGCGGTGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR TCA 90 bp | GGATGCCCCTCACCGCGGTCATGTAGAGGCTGCTATGCTCTTGGACTTCACAGGGGTTGCTGTGACCACTaGCTCCTTCTGCATCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: GCPSPRSCRGCYALGLHRGCCDH*LLLHQK Trigger: CTTTTGATGCAGAAGGAGTCAGTGGTCACAGCAACC...CCTGTGAAGTCCAAGAGCATAGCAGCCTCTACATGACCGCGGTGAGGGGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | GCCCAAAGCCTGGCCAGACGACTTCTTGCTCTGCTTCTCCCTCTTGTTCTGAGGGTGCCAAGCCTAGCATaGTGGGAGCAAAGAACATGG | + |
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Preference number: 4 (lower is better) Translates to: AQSLARRLLALLLPLVLRVPSLA*WEQRTW Trigger: CCATGTTCTTTGCTCCCACCATGCTAGGCTTGGCAC...CCTCAGAACAAGAGGGAGAAGCAGAGCAAGAAGTCGTCTGGCCAGGCTTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CAA 72 bp | CATCCTTCATGTGGTCCCTGTTTGGCAGACGCTGCTTaGCTGGGGTTTCCCTGGGTCAGGCAGGTAAATCAG | + |
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Preference number: 4 (lower is better) Translates to: HPSCGPCLADAA*LGFPWVRQVNQ Trigger: CTGATTTACCTGCCTGACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATGAAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CAA 72 bp | GCCCCTCACCGCGGTCATGTAGAGGCTGCTATGCTCTaGGACTTCACAGGCTTCAGAACTGTGATCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: APHRGHVEAAML*DFTGFRTVIQE Trigger: TTCTTGGATCACAGTTCTGAAGCCTGTGAAGTCCAAGAGCATAGCAGCCTCTACATGACCGCGGTGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | AACAGAAGACTGACCAAAACAGCCTGGTCTGGAAACCATGTAAACATCACACCTGCTGAAGGAGGGTGCTaGCCACGAGCTCCGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: NRRLTKTAWSGNHVNITPAEGGC*PRAPCP Trigger: GGGACACGGAGCTCGTGGCCAGCACCCTCCTTCAGC...AGGTGTGATGTTTACATGGTTTCCAGACCAGGCTGTTTTGGTCAGTCTTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR TCA 90 bp | CTCACTATGTTGACCAGGCTGGCCACAAACTTAGAGATATCCACAAGTCTCTGTTTGGCATGTATGTGCTaGAGGAGGGTGCTGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: LTMLTRLATNLEISTSLCLACMC*RRVLAT Trigger: CGTGGCCAGCACCCTCCTTCAGCACATACATGCCAA...ACAGAGACTTGTGGATATCTCTAAGTTTGTGGCCAGCCTGGTCAACATAGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | TACAGGAACAGAAGACTGACCAAAACAGCCTGGTCTGGAAACCATGTAAACATCAGCGCGTTCACAGACTaGAGCGTGAGCACGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: YRNRRLTKTAWSGNHVNISAFTD*SVSTEH Trigger: GTGCTCCGTGCTCACGCTCCAGTCTGTGAACGCGCT...GATGTTTACATGGTTTCCAGACCAGGCTGTTTTGGTCAGTCTTCTGTTCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| 3UTR CAA 72 bp | TGGGGTGGCTACTATTGTGTTGGTGTAGGCTTGGTTTaGGCAGGTTTTCCTCAGAAGAGGAAGCTGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: WGGYYCVGVGLV*AGFPQKRKLGW Trigger: CCAACCCAGCTTCCTCTTCTGAGGAAAACCTGCCAAAACCAAGCCTACACCAACACAATAGTAGCCACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR TCA 90 bp | GGAAGTGACAGGGTTATTTGTTGTAGGCGTGGCTTTGTTCTAAAGGAACTCTTTGAGAACATCCTGGGGTaGCAGCAGAGTCCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSDRVICCRRGFVLKELFENILG*QQSPGQ Trigger: CTGCCCTGGACTCTGCTGTCACCCCAGGATGTTCTC...AAAGAGTTCCTTTAGAACAAAGCCACGCCTACAACAAATAACCCTGTCACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR GCA 90 bp | TATAAAGGTGTGGGCCCAGCTCCTACTGTGAAAAGGCAGAGAACCAAGGTGTTTGGCTTTCTTGGCCTGTaGCACTTCTTTGCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YKGVGPAPTVKRQRTKVFGFLGL*HFFAGE Trigger: CTCACCAGCAAAGAAGTGGCACAGGCCAAGAAAGCC...AAACACCTTGGTTCTCTGCCTTTTCACAGTAGGAGCTGGGCCCACACCTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | AACAGAAGACTGACCAAAACAGCCTGGTCTGGAAACCATGTAAACATCACACCTTGCGGTGGCAGGACATaGCTTTCTTGGCCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRRLTKTAWSGNHVNITPCGGRT*LSWPVP Trigger: TGGCACAGGCCAAGAAAGCCATGTCCTGCCACCGCA...AGGTGTGATGTTTACATGGTTTCCAGACCAGGCTGTTTTGGTCAGTCTTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR TCA 90 bp | TATAAAGGTGTGGGCCCAGCTCCTACTGTGAAAAGGCAGAGAACCAAGGTGTTTGCAATATGGTTGCTGTaGCCACTGACTCCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: YKGVGPAPTVKRQRTKVFAIWLL*PLTPSA Trigger: TGCAGAAGGAGTCAGTGGTCACAGCAACCATATTGC...AAACACCTTGGTTCTCTGCCTTTTCACAGTAGGAGCTGGGCCCACACCTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | TACAGGAACAGAAGACTGACCAAAACAGCCTGGTCTGGAAACCATGTAAACATCTGGGAGCAAAGAACATaGCTTCATCGTCCGGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: YRNRRLTKTAWSGNHVNIWEQRT*LHRPGA Trigger: CGCACCCGGACGATGAAGCCATGTTCTTTGCTCCCA...GATGTTTACATGGTTTCCAGACCAGGCTGTTTTGGTCAGTCTTCTGTTCCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | TATAAAGGTGTGGGCCCAGCTCCTACTGTGAAAAGGCAGAGAACCAAGGTGTTTAGGACATGGCTTTCTTaGCCTGTGCCACTTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: YKGVGPAPTVKRQRTKVFRTWLS*PVPLLC Trigger: GCAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCT...AAACACCTTGGTTCTCTGCCTTTTCACAGTAGGAGCTGGGCCCACACCTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR TCA 90 bp | TTTGTGGTAAAGACAACTTCCCTAGGCTTTGCTGGATGTCTGGTGCAAACTCTGTCAGAGGAACCGCAGTaGGTTGATTCTCATGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FVVKTTSLGFAGCLVQTLSEEPQ*VDSHVS Trigger: AGATACATGAGAATCAACTCACTGCGGTTCCTCTGA...CAGAGTTTGCACCAGACATCCAGCAAAGCCTAGGGAAGTTGTCTTTACCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | GGAAGTGACAGGGTTATTTGTTGTAGGCGTGGCTTTGTTCTAAAGGAACTCTTTCCAAGCCTAGCATGGTaGGAGCAAAGAACATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GSDRVICCRRGFVLKELFPSLAW*EQRTWL Trigger: AAGCCATGTTCTTTGCTCCCACCATGCTAGGCTTGG...AAAGAGTTCCTTTAGAACAAAGCCACGCCTACAACAAATAACCCTGTCACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR TCA 90 bp | GGAAGTGACAGGGTTATTTGTTGTAGGCGTGGCTTTGTTCTAAAGGAACTCTTTCCACTTCTTTGCTGGTaGGCACAAAGAGAACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSDRVICCRRGFVLKELFPLLCW*AQREHP Trigger: AGGATGTTCTCTTTGTGCTCACCAGCAAAGAAGTGG...AAAGAGTTCCTTTAGAACAAAGCCACGCCTACAACAAATAACCCTGTCACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR GCA 90 bp | CTCACTATGTTGACCAGGCTGGCCACAAACTTAGAGATATCCACAAGTCTCTGTAACACAGCACAGCTTTaGAGAAGCTCTTTCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTMLTRLATNLEISTSLCNTAQL*RSSFFR Trigger: TCGAAAGAAAGAGCTTCTGCAAAGCTGTGCTGTGTT...ACAGAGACTTGTGGATATCTCTAAGTTTGTGGCCAGCCTGGTCAACATAGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR GCA 90 bp | GGAAGTGACAGGGTTATTTGTTGTAGGCGTGGCTTTGTTCTAAAGGAACTCTTTACCACTGACTCCTTCTaGATCAAAAGTCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSDRVICCRRGFVLKELFTTDSF*IKSHHQ Trigger: CTGGTGGTGACTTTTGATGCAGAAGGAGTCAGTGGT...AAAGAGTTCCTTTAGAACAAAGCCACGCCTACAACAAATAACCCTGTCACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CCA 90 bp | AACTCTGTTATCATGCAAACTATTGGTAAATTAGTGGGGTGGCTACTATTGTGTACAAAGAGAACATCCTaGGGTGACAGCAGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSVIMQTIGKLVGWLLLCTKRTS*GDSRVQ Trigger: CTGGACTCTGCTGTCACCCCAGGATGTTCTCTTTGT...ACACAATAGTAGCCACCCCACTAATTTACCAATAGTTTGCATGATAACAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 90 bp | GGCTCCCGGCAGGCCCGCCTGCTCCGGAGACCTCATTCGTTCCGCTaGGTTCCAAACCCGGAGGAAGCCCCAAGTCAGGACAGCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRQARLLRRPHSFR*VPNPEEAPSQDSHG Trigger: GCCGTGGCTGTCCTGACTTGGGGCTTCCTCCGGGTTTGGAACTCAGCGGAACGAATGAGGTCTCCGGAGCAGGCGGGCCTGCCGGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 90 bp | AAGCCTAGCATGGTGGGAGCAAAGAACATGGCTTCATCGTCCGGGTaGGCGATCACTACAAGGGCCCGGCTTCCGGCTCCCGGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KPSMVGAKNMASSSG*AITTRARLPAPGRP Trigger: GGGCCTGCCGGGAGCCGGAAGCCGGGCCCTTGTAGTGATCGCGCACCCGGACGATGAAGCCATGTTCTTTGCTCCCACCATGCTAGGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS CCA 90 bp | GGCAGATCCAGGAGGAAGGCGTACTTCCGAAGCGCGTTCACAGACTaGAGCGTGAGCACGGAGCACCCTTTAGGCAGCTTCCCTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRSRRKAYFRSAFTD*SVSTEHPLGSFPPE Trigger: CTCAGGAGGGAAGCTGCCTAAAGGGTGCTCCGTGCTCACGCTCCAGTCTGTGAACGCGCTTCGGAAGTACGCCTTCCTCCTGGATCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 90 bp | TCACCACCAGGTCAGTGCCATTGGCATGTATGTGCTGAAGGAGGGTaGTGGCCACGAGCTCCGTGTCCCACTGCACTTCTGGATCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPPGQCHWHVCAEGG*WPRAPCPTALLDHP Trigger: CGGATGATCCAGAAGTGCAGTGGGACACGGAGCTCGTGGCCAGCACCCTCCTTCAGCACATACATGCCAATGGCACTGACCTGGTGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS CCA 90 bp | CCACCAGGTCAGTGCCATTGGCATGTATGTGCTGAAGGAGGGTGCTaGCCACGAGCTCCGTGTCCCACTGCACTTCTGGATCATCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPGQCHWHVCAEGGC*PRAPCPTALLDHPE Trigger: TTCCGGATGATCCAGAAGTGCAGTGGGACACGGAGCTCGTGGCCAGCACCCTCCTTCAGCACATACATGCCAATGGCACTGACCTGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 90 bp | GCATCAAAAGTCACCACCAGGTCAGTGCCATTGGCATGTATGTGCTaGAGGAGGGTGCTGGCCACGAGCTCCGTGTCCCACTGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASKVTTRSVPLACMC*RRVLATSSVSHCTS Trigger: AGAAGTGCAGTGGGACACGGAGCTCGTGGCCAGCACCCTCCTTCAGCACATACATGCCAATGGCACTGACCTGGTGGTGACTTTTGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 90 bp | GGTGGCAGGACATGGCTTTCTTGGCCTGTGCCACTTCTTTGCTGGTaGGCACAAAGAGAACATCCTGGGGTGACAGCAGAGTCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRTWLSWPVPLLCW*AQREHPGVTAESRA Trigger: TGCCCTGGACTCTGCTGTCACCCCAGGATGTTCTCTTTGTGCTCACCAGCAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCTGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 90 bp | ATCTGGAGAAGAGGACGTAGAGGTATCGGAACCAGAGGAGCTGGCTaGGGTGGCAGGACATGGCTTTCTTGGCCTGTGCCACTTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: IWRRGRRGIGTRGAG*GGRTWLSWPVPLLC Trigger: GCAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCTGCCACCGCAGCCAGCTCCTCTGGTTCCGATACCTCTACGTCCTCTTCTCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CAA 90 bp | CCTGGCCAGACGACTTCTTGCTCTGCTTCTCCCTCTTGTTCTGAGGGTCTGACCCAGGACATGGCTTTCTaGGCCTGTGCCACTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGQTTSCSASPSCSEGLTQDMAF*ACATSL Trigger: CAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCTG...GGTCAGACCCTCAGAACAAGAGGGAGAAGCAGAGCAAGAAGTCGTCTGGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CAA 90 bp | TTCATGTGGTCCCTGTTTGGCAGACGCTGCTTTGCTGGGGTTTCCCTGGGTCAGAGGAACCGCAGTGAGTaGATTCTCATGTATCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FMWSLFGRRCFAGVSLGQRNRSE*ILMYLE Trigger: CTCCAGATACATGAGAATCAACTCACTGCGGTTCCT...CTGACCCAGGGAAACCCCAGCAAAGCAGCGTCTGCCAAACAGGGACCACATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CAA 90 bp | CCTGGCCAGACGACTTCTTGCTCTGCTTCTCCCTCTTGTTCTGAGGGTCTGACCTCCGGAAAGTCCCTCTaGTCAATAATCATTACACGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQTTSCSASPSCSEGLTSGKSL*SIIITR Trigger: CCGTGTAATGATTATTGACAAGAGGGACTTTCCGGA...GGTCAGACCCTCAGAACAAGAGGGAGAAGCAGAGCAAGAAGTCGTCTGGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 90 bp | CAGAAGCTCTTTCTTTCGAATCTCACCTTGATTGTAGTAGTTTCCTaGGGAGAAGCAGAGCAGGGACACCTGCTGCTCCAGGCGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QKLFLSNLTLIVVVS*GEAEQGHLLLQACQ Trigger: TTGGCACGCCTGGAGCAGCAGGTGTCCCTGCTCTGCTTCTCCTCAGGAAACTACTACAATCAAGGTGAGATTCGAAAGAAAGAGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 90 bp | GGGCCCTCACAGCTTTGTACAAAGCAATATGGTTGCTGTGACCACTaGCTCCTTCTGCATCAAAAGTCACCACCAGGTCAGTGCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPSQLCTKQYGCCDH*LLLHQKSPPGQCHW Trigger: CCAATGGCACTGACCTGGTGGTGACTTTTGATGCAGAAGGAGTCAGTGGTCACAGCAACCATATTGCTTTGTACAAAGCTGTGAGGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 90 bp | GAGTGCAGGGCCCTCACAGCTTTGTACAAAGCAATATGGTTGCTGTaGCCACTGACTCCTTCTGCATCAAAAGTCACCACCAGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ECRALTALYKAIWLL*PLTPSASKVTTRSV Trigger: CACTGACCTGGTGGTGACTTTTGATGCAGAAGGAGTCAGTGGTCACAGCAACCATATTGCTTTGTACAAAGCTGTGAGGGCCCTGCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 90 bp | AGCTTTGTACAAAGCAATATGGTTGCTGTGACCACTGACTCCTTCTaGATCAAAAGTCACCACCAGGTCAGTGCCATTGGCATGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFVQSNMVAVTTDSF*IKSHHQVSAIGMYV Trigger: CACATACATGCCAATGGCACTGACCTGGTGGTGACTTTTGATGCAGAAGGAGTCAGTGGTCACAGCAACCATATTGCTTTGTACAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS-3UTR CAA 90 bp | GGAAGTGACAGGGTTATTTGTTGTAGGCGTGGCTTTGTTCTAAAGGAACTCTTTCAACACAGCACAGCTTaGCAGAAGCTCTTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GSDRVICCRRGFVLKELFQHSTA*QKLFLS Trigger: CGAAAGAAAGAGCTTCTGCAAAGCTGTGCTGTGTTG...AAAGAGTTCCTTTAGAACAAAGCCACGCCTACAACAAATAACCCTGTCACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 72 bp | ACAAGGGCCCGGCTTCCGGCTCCCGGCAGGCCCGCCTaGTCCGGAGACCTCATTCGTTCCGCTGAGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TRARLPAPGRPA*SGDLIRSAEFQ Trigger: TTGGAACTCAGCGGAACGAATGAGGTCTCCGGAGCAGGCGGGCCTGCCGGGAGCCGGAAGCCGGGCCCTTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 72 bp | ATGGTGGGAGCAAAGAACATGGCTTCATCGTCCGGGTaGGCGATCACTACAAGGGCCCGGCTTCCGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: MVGAKNMASSSG*AITTRARLPAP Trigger: GGGAGCCGGAAGCCGGGCCCTTGTAGTGATCGCGCACCCGGACGATGAAGCCATGTTCTTTGCTCCCACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 72 bp | GGTCAGTGCCATTGGCATGTATGTGCTGAAGGAGGGTaGTGGCCACGAGCTCCGTGTCCCACTGCACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQCHWHVCAEGG*WPRAPCPTALL Trigger: CAGAAGTGCAGTGGGACACGGAGCTCGTGGCCAGCACCCTCCTTCAGCACATACATGCCAATGGCACTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 72 bp | AGAGGACGTAGAGGTATCGGAACCAGAGGAGCTGGCTaGGGTGGCAGGACATGGCTTTCTTGGCCTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGRRGIGTRGAG*GGRTWLSWPVP Trigger: TGGCACAGGCCAAGAAAGCCATGTCCTGCCACCGCAGCCAGCTCCTCTGGTTCCGATACCTCTACGTCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS CCA 72 bp | AGGAGGAAGGCGTACTTCCGAAGCGCGTTCACAGACTaGAGCGTGAGCACGGAGCACCCTTTAGGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RRKAYFRSAFTD*SVSTEHPLGSF Trigger: GAAGCTGCCTAAAGGGTGCTCCGTGCTCACGCTCCAGTCTGTGAACGCGCTTCGGAAGTACGCCTTCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS GCA 72 bp | AGCACGGAGCACCCTTTAGGCAGCTTCCCTCCTGAGTaGAGGGCCCTCACAGCTTTGTACAAAGCAATATGG | + |
|
Preference number: 6 (lower is better) Translates to: STEHPLGSFPPE*RALTALYKAIW Trigger: CCATATTGCTTTGTACAAAGCTGTGAGGGCCCTGCACTCAGGAGGGAAGCTGCCTAAAGGGTGCTCCGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS CAA 72 bp | TCCCACTGCACTTCTGGATCATCCGGAAAGTCCCTCTaGTCAATAATCATTACACGGGAAGGTGGAATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SHCTSGSSGKSL*SIIITREGGIP Trigger: GGGGATTCCACCTTCCCGTGTAATGATTATTGACAAGAGGGACTTTCCGGATGATCCAGAAGTGCAGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 72 bp | TTTCTTTCGAATCTCACCTTGATTGTAGTAGTTTCCTaGGGAGAAGCAGAGCAGGGACACCTGCTGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLSNLTLIVVVS*GEAEQGHLLLQ Trigger: CTGGAGCAGCAGGTGTCCCTGCTCTGCTTCTCCTCAGGAAACTACTACAATCAAGGTGAGATTCGAAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS TCA 72 bp | CAGCTTTGTACAAAGCAATATGGTTGCTGTGACCACTaGCTCCTTCTGCATCAAAAGTCACCACCAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLCTKQYGCCDH*LLLHQKSPPGQ Trigger: CTGACCTGGTGGTGACTTTTGATGCAGAAGGAGTCAGTGGTCACAGCAACCATATTGCTTTGTACAAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS CCA 72 bp | AAAGTCCCTCTTGTCAATAATCATTACACGGGAAGGTaGAATCCCCAACACAGCACAGCTTTGCAGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KVPLVNNHYTGR*NPQHSTALQKL Trigger: GAGCTTCTGCAAAGCTGTGCTGTGTTGGGGATTCCACCTTCCCGTGTAATGATTATTGACAAGAGGGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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| CDS CAA 90 bp | AATAATCATTACACGGGAAGGTGGAATCCCCAACACAGCACAGCTTaGCAGAAGCTCTTTCTTTCGAATCTCACCTTGATTGTAGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: NNHYTGRWNPQHSTA*QKLFLSNLTLIVVV Trigger: AACTACTACAATCAAGGTGAGATTCGAAAGAAAGAGCTTCTGCAAAGCTGTGCTGTGTTGGGGATTCCACCTTCCCGTGTAATGATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014389.6 |
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