Pregenerated sensors for PIGK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039047Ensembl transcript IDs: ENSMUST00000045029.15, ENSMUST00000051510.9, ENSMUST00000159899.8, ENSMUST00000161596.6, ENSMUST00000162642.8, ENSMUST00000200224.5
Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCTCCCTTACCTGCTCACCAGGGCGAGCTCTCCAGCACTGCTCTaGTTAGGCCACCCAGTGCTGCTACTGGCAAGAGGCAGGGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: ALPYLLTRASSPALL*LGHPVLLLARGRVS Trigger: GCTGACCCTGCCTCTTGCCAGTAGCAGCACTGGGTGGCCTAACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAGCAGGTAAGGGAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR TCA 90 bp | CCGGGAGGGTGCCAGTCTCTCGGCTTTGGCTTCTGGTGTATTATCTaGGCCACCGGGAGCTGCTCAGCATACTTGAGAGGTCCCATGCGC | + |
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Preference number: 1 (lower is better) Translates to: PGGCQSLGFGFWCII*ATGSCSAYLRGPMR Trigger: GCGCATGGGACCTCTCAAGTATGCTGAGCAGCTCCCGGTGGCTCAGATAATACACCAGAAGCCAAAGCCGAGAGACTGGCACCCTCCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051510.9 ENSMUST00000200224.5 |
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| 3UTR GCA 90 bp | GGTCAGCTGACAGCACCCATGTCTCCAGAGTTAAGTGCTCTGTTCTaGCCAGTCAAGGTGTGGGCCCACTCTCCCCAGTGCTGCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GQLTAPMSPELSALF*PVKVWAHSPQCCRR Trigger: CCTCCTGCAGCACTGGGGAGAGTGGGCCCACACCTTGACTGGGCAGAACAGAGCACTTAACTCTGGAGACATGGGTGCTGTCAGCTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CCA 90 bp | CAGCCCCAGGATGAAGCCTCCGGGAGGGTGCCAGTCTCTCGGCTTTaGCTTCTGGTGTATTATCTGAGCCACCGGGAGCTGCTCAGCATA | + |
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Preference number: 1 (lower is better) Translates to: QPQDEASGRVPVSRL*LLVYYLSHRELLSI Trigger: TATGCTGAGCAGCTCCCGGTGGCTCAGATAATACACCAGAAGCCAAAGCCGAGAGACTGGCACCCTCCCGGAGGCTTCATCCTGGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051510.9 ENSMUST00000200224.5 |
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| 3UTR CCA 90 bp | GGTCAGCTCTCCCACACTCACACACCCTTTGCCCAGGCCACCTCATaGCAGAGGAGTAGCAGGATCAGCTCTCCCTCACATAGAGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GQLSHTHTPFAQATS*QRSSRISSPSHRGP Trigger: TGGGCCTCTATGTGAGGGAGAGCTGATCCTGCTACTCCTCTGCCATGAGGTGGCCTGGGCAAAGGGTGTGTGAGTGTGGGAGAGCTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CCA 90 bp | CCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTGTCTCCACTaGTCTCCTGAGGCTGGGCTGCTTGTCCAGCTTCCACTCAGACGT | + |
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Preference number: 1 (lower is better) Translates to: PCRCVSTGLLPMCLH*SPEAGLLVQLPLRR Trigger: ACGTCTGAGTGGAAGCTGGACAAGCAGCCCAGCCTCAGGAGACCAGTGGAGACACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR TCA 90 bp | TGCATAGCCACAGACTCAGACATGGCCCTCACTGGCAGCATGGTCTaGGGTGGCAGCATTGGCCACCAACCACAGGCTACTCCTCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: CIATDSDMALTGSMV*GGSIGHQPQATPLH Trigger: GTGGAGAGGAGTAGCCTGTGGTTGGTGGCCAATGCTGCCACCTCAGACCATGCTGCCAGTGAGGGCCATGTCTGAGTCTGTGGCTATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CCA 90 bp | AGATGGTATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTaGGCCTGCGGGCTGCTGAGCTGCTCAGCCTGCCAGCTCTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: RWYGFWGWTNSEPWT*ACGLLSCSACQLSL Trigger: AAGGGAGAGCTGGCAGGCTGAGCAGCTCAGCAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR TCA 90 bp | ATGTGTCTCCACTGGTCTCCTGCCGATGTGTCTCCACTGGTCTCCTaGGGCTGGGCTGCTTGTCCAGCTTCCACTCAGACGTCTGAATGC | + |
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Preference number: 1 (lower is better) Translates to: MCLHWSPADVSPLVS*GWAACPASTQTSEC Trigger: GCATTCAGACGTCTGAGTGGAAGCTGGACAAGCAGCCCAGCCTCAGGAGACCAGTGGAGACACATCGGCAGGAGACCAGTGGAGACACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CCA 90 bp | GTGGTGACTCCTGCAGAGCAGGCTGCCATGAAGCTGGTGGGCCCCTaGATGAAATCCTGTCTATGCACAGTGGGTGGGTATATACAGCCC | + |
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Preference number: 1 (lower is better) Translates to: VVTPAEQAAMKLVGP*MKSCLCTVGGYIQP Trigger: GGGCTGTATATACCCACCCACTGTGCATAGACAGGATTTCATCCAGGGGCCCACCAGCTTCATGGCAGCCTGCTCTGCAGGAGTCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CCA 90 bp | CTATTCTTGCCTCTGCATAGCCACAGACTCAGACATGGCCCTCACTaGCAGCATGGTCTGAGGTGGCAGCATTGGCCACCAACCACAGGC | + |
|
Preference number: 1 (lower is better) Translates to: LFLPLHSHRLRHGPH*QHGLRWQHWPPTTG Trigger: GCCTGTGGTTGGTGGCCAATGCTGCCACCTCAGACCATGCTGCCAGTGAGGGCCATGTCTGAGTCTGTGGCTATGCAGAGGCAAGAATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR GCA 90 bp | TCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTaGCGATGTGTCTCCACTGGTCTCCTGAGGCTGGGCTGCTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SGLKLDLADVSPLVS*RCVSTGLLRLGCLS Trigger: GGACAAGCAGCCCAGCCTCAGGAGACCAGTGGAGACACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CCA 90 bp | TGTGTCATACATCAGAGAGCAGGTCTGTGGGTGGCACGTGGTCCATaGTCCACAGGCCTCTGTCTACTGTCTTCCTCCCAAGGTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: CVIHQRAGLWVARGP*STGLCLLSSSQGAS Trigger: TGAGGCACCTTGGGAGGAAGACAGTAGACAGAGGCCTGTGGACCATGGACCACGTGCCACCCACAGACCTGCTCTCTGATGTATGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CCA 90 bp | GGGTATATACAGCCCACCTGTGTCATACATCAGAGAGCAGGTCTGTaGGTGGCACGTGGTCCATGGTCCACAGGCCTCTGTCTACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: GYIQPTCVIHQRAGL*VARGPWSTGLCLLS Trigger: AGACAGTAGACAGAGGCCTGTGGACCATGGACCACGTGCCACCCACAGACCTGCTCTCTGATGTATGACACAGGTGGGCTGTATATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR TCA 90 bp | CCGTGGTGTTTCTCTCTTCTGTTGGTTGTTGTTTGTTGCCCAGGCTaGCCTTCAACACCCCCAGGGCTCAAAAATCGACTCGGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PWCFSLLLVVVCCPG*PSTPPGLKNRLGLL Trigger: CAGGAGGCCGAGTCGATTTTTGAGCCCTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAACAACAACCAACAGAAGAGAGAAACACCACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR GCA 90 bp | AGTGCGGAGCTCTGCAGTGCATCTGGAAAGCGCTTTCTTCAGCTCTaGGATTCACCTCACATACAGCTCTGTGGCTGGGCAAAGTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: SAELCSASGKRFLQL*DSPHIQLCGWAKSD Trigger: GTCTGACTTTGCCCAGCCACAGAGCTGTATGTGAGGTGAATCGCAGAGCTGAAGAAAGCGCTTTCCAGATGCACTGCAGAGCTCCGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CCA 90 bp | GGCGGGGCCTTCAGTGTGTGTGCTCCATGTATGTCATCCAGTTTATaGGGCTGTCCTCAGGGACAGCATAGATCCAGCTGTCAGCAATCT | + |
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Preference number: 1 (lower is better) Translates to: GGAFSVCAPCMSSSL*GCPQGQHRSSCQQS Trigger: AGATTGCTGACAGCTGGATCTATGCTGTCCCTGAGGACAGCCCCATAAACTGGATGACATACATGGAGCACACACACTGAAGGCCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CCA 90 bp | ATATACAGCCCACCTGTGTCATACATCAGAGAGCAGGTCTGTGGGTaGCACGTGGTCCATGGTCCACAGGCCTCTGTCTACTGTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: IYSPPVSYIREQVCG*HVVHGPQASVYCLP Trigger: AGGAAGACAGTAGACAGAGGCCTGTGGACCATGGACCACGTGCCACCCACAGACCTGCTCTCTGATGTATGACACAGGTGGGCTGTATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CCA 90 bp | TGTTCATGCATCCCAACGATTTGCAGATGGTATGGATTTTGGGGATaGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: CSCIPTICRWYGFWG*TNSEPWTWACGLLS Trigger: GCTCAGCAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCTGCAAATCGTTGGGATGCATGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR TCA 90 bp | TCAGGAAGCTCGTGCCCTCAGCCTCTTCAGGTCTCTCGCCTTTCATaGCCTTGTCACCTTTGGAGAGCTCTTCTTGGTGCTCAGTCACTT | + |
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Preference number: 1 (lower is better) Translates to: SGSSCPQPLQVSRLS*PCHLWRALLGAQSL Trigger: AAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGCGAGAGACCTGAAGAGGCTGAGGGCACGAGCTTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| 3UTR TCA 90 bp | AAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTTGGATGCTGGTaGGGAGCTTTACGAAGCTCTGTCTGCTTCCAGTCCAACCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: KGLHAGLSFPILGCW*GALRSSVCFQSNQV Trigger: AACCTGGTTGGACTGGAAGCAGACAGAGCTTCGTAAAGCTCCTCACCAGCATCCAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| 3UTR CCA 90 bp | GAAGCTGGTGGGCCCCTGGATGAAATCCTGTCTATGCACAGTGGGTaGGTATATACAGCCCACCTGTGTCATACATCAGAGAGCAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: EAGGPLDEILSMHSG*VYTAHLCHTSESRS Trigger: AGACCTGCTCTCTGATGTATGACACAGGTGGGCTGTATATACCCACCCACTGTGCATAGACAGGATTTCATCCAGGGGCCCACCAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR TCA 90 bp | TCAGCTGATTCGTGCCCTCAGCCTCTTCAGGTCTCTCGCCTTTCATaGCCTTGTCACCTTTGGAGAGCTCTTCTTGGTGCTCAGTCACTT | + |
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Preference number: 1 (lower is better) Translates to: SADSCPQPLQVSRLS*PCHLWRALLGAQSL Trigger: AAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGCGAGAGACCTGAAGAGGCTGAGGGCACGAATCAGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR GCA 90 bp | TTCCCAGGAGTTTCTGCTCCCAGGAAAGCCCTGGTTGGTGTTTCCTaGTTTGTAGATAATCTGAGGCTCAGGGATGAGCAGCAAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: FPGVSAPRKALVGVS*FVDNLRLRDEQQAI Trigger: GATGGCTTGCTGCTCATCCCTGAGCCTCAGATTATCTACAAAGCAGGAAACACCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CCA 90 bp | AGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCAGATGGTATaGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SRTGLFMHPNDLQMV*ILGMDKFRALDLGL Trigger: CAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCTGCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR GCA 90 bp | AGTCTGACCTTGGGGATAAGGTGTTTGGAGCTGGCTAATGAGGCATaGCATGGCACTGAAGAAAGAAAAGGCAGCAGTCCCAGAAGAACT | + |
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Preference number: 1 (lower is better) Translates to: SLTLGIRCLELANEA*HGTEERKGSSPRRT Trigger: AGTTCTTCTGGGACTGCTGCCTTTTCTTTCTTCAGTGCCATGGCATGCCTCATTAGCCAGCTCCAAACACCTTATCCCCAAGGTCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CCA 90 bp | AAAGCGCTTTCTTCAGCTCTGCGATTCACCTCACATACAGCTCTGTaGCTGGGCAAAGTCAGACAGTCTGACCTTGGGGATAAGGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: KALSSALRFTSHTAL*LGKVRQSDLGDKVF Trigger: AAACACCTTATCCCCAAGGTCAGACTGTCTGACTTTGCCCAGCCACAGAGCTGTATGTGAGGTGAATCGCAGAGCTGAAGAAAGCGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR TCA 90 bp | ATGAATAGTAAATCTATAGGCACAGCCCACCCCAGCACGGCTCTCTaGTGCCAAAGTCTGAAAGAGAAAAGAGTGTCTGAGAATGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: MNSKSIGTAHPSTAL*CQSLKEKRVSENGH Trigger: GTGACCATTCTCAGACACTCTTTTCTCTTTCAGACTTTGGCATCAGAGAGCCGTGCTGGGGTGGGCTGTGCCTATAGATTTACTATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR GCA 90 bp | GGCTCTCTGCAAGGCAAAAGCCTTCTTGGAAGTATTTCCTATCCCTaGATGAAGGGGAATAAAGCAAACTGTTTAACAGTCTCCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: GSLQGKSLLGSISYP*MKGNKANCLTVSLP Trigger: GGGAAGGGAGACTGTTAAACAGTTTGCTTTATTCCCCTTCATGCAGGGATAGGAAATACTTCCAAGAAGGCTTTTGCCTTGCAGAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR TCA 90 bp | GTCTACTGTCTTCCTCCCAAGGTGCCTCAATTTGATTTGATGATTTaGTTTTTATGTGTCCTAGGCATGACACAACTTTGGCCACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: VYCLPPKVPQFDLMI*FLCVLGMTQLWPPG Trigger: CCCTGGTGGCCAAAGTTGTGTCATGCCTAGGACACATAAAAATCAAATCATCAAATCAAATTGAGGCACCTTGGGAGGAAGACAGTAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR TCA 90 bp | TCCACAGGCCTCTGTCTACTGTCTTCCTCCCAAGGTGCCTCAATTTaGTTTGATGATTTGATTTTTATGTGTCCTAGGCATGACACAACT | + |
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Preference number: 1 (lower is better) Translates to: STGLCLLSSSQGASI*FDDLIFMCPRHDTT Trigger: AGTTGTGTCATGCCTAGGACACATAAAAATCAAATCATCAAATCAAATTGAGGCACCTTGGGAGGAAGACAGTAGACAGAGGCCTGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR GCA 90 bp | TATCAAAATTCTAATGTGTACCAAATGGGAGAGAGTAAGAGAAAGTaGATGTGTGAGTACTTGCCTGTGTGCCTGGGTGCATGTAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: YQNSNVYQMGESKRK*MCEYLPVCLGACRV Trigger: TACCCTACATGCACCCAGGCACACAGGCAAGTACTCACACATGCACTTTCTCTTACTCTCTCCCATTTGGTACACATTAGAATTTTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CCA 90 bp | GTTCCGATTCTTTCAGGAAGACAGAACAAAGCAGTTGCGTTTCTATaGTGTGTGATCCCAAGGCTATTATTTAGGAAGTCTGGGGAATTT | + |
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Preference number: 1 (lower is better) Translates to: VPILSGRQNKAVAFL*CVIPRLLFRKSGEF Trigger: AAATTCCCCAGACTTCCTAAATAATAGCCTTGGGATCACACACCATAGAAACGCAACTGCTTTGTTCTGTCTTCCTGAAAGAATCGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR GCA 90 bp | GCTCCTAAGAAAAGAAATTCAGTCATAACGCTGGTGTTCTTAATGTaGTTTGGGACAATCTTTCACCTATGGATGGATGGATGGATGGAT | + |
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Preference number: 1 (lower is better) Translates to: APKKRNSVITLVFLM*FGTIFHLWMDGWMD Trigger: ATCCATCCATCCATCCATCCATAGGTGAAAGATTGTCCCAAAGCACATTAAGAACACCAGCGTTATGACTGAATTTCTTTTCTTAGGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CCA 90 bp | CTTGTCCAGCTTCCACTCAGACGTCTGAATGCACATGTTAGTGAATaGCAAAATGCACAGATTTATTTCCTTAAACTTGTCAGTTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LVQLPLRRLNAHVSE*QNAQIYFLKLVSLG Trigger: TCCCAAACTGACAAGTTTAAGGAAATAAATCTGTGCATTTTGCCATTCACTAACATGTGCATTCAGACGTCTGAGTGGAAGCTGGACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACCAGGGCGAGCTCTCCAGCACTGCTCTGGTTAGGCCACCCAGTGCTGCTATGCCCAGTCAAGGTGTaGGCCCACTCTCCCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LTRASSPALLWLGHPVLLCPVKV*AHSPQC Trigger: GCACTGGGGAGAGTGGGCCCACACCTTGACTGGGCA...TAGCAGCACTGGGTGGCCTAACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR GCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGCTGAGCTGCTCAGCCTaGCAGCTCTCCCTTACCTGC | + |
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Preference number: 2 (lower is better) Translates to: YGFWGWTNSEPWTWACGLLSCSA*QLSLTC Trigger: GCAGGTAAGGGAGAGCTGGCAGGCTGAGCAGCTCAG...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACCAGGGCGAGCTCTCCAGCACTGCTCTGGTTAGGCCACCCAGTGCTGCTAAGCTTTCCTGACTGGTaGAGGCTACAAGGGAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LTRASSPALLWLGHPVLLSFPDW*RLQGRH Trigger: ATGCCTCCCTTGTAGCCTCCACCAGTCAGGAAAGCT...TAGCAGCACTGGGTGGCCTAACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTGGTCCTGTTCTGCACAGCCTTGGACAGCCACGTGGTCACGAGAGGCTGGGCAACAAGCTAGGATaGACAAGGACTGCCATGTGC | + |
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Preference number: 2 (lower is better) Translates to: RVGPVLHSLGQPRGHERLGNKLG*TRTAMC Trigger: GCACATGGCAGTCCTTGTTCATCCTAGCTTGTTGCC...CAGCCTCTCGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAACACGAGAGTGTGGGGCTCATGCTCTCCTCATCTGTAGGGGCTGTGACACGGTCAGGAAGCTCGTaGCCTCAGCCTCTTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: QKHESVGLMLSSSVGAVTRSGSS*PQPLQV Trigger: GACCTGAAGAGGCTGAGGGCACGAGCTTCCTGACCG...TGTCACAGCCCCTACAGATGAGGAGAGCATGAGCCCCACACTCTCGTGTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| 3UTR-3UTR CCA 90 bp | CTCACCAGGGCGAGCTCTCCAGCACTGCTCTGGTTAGGCCACCCAGTGCTGCTACCTGTCTATGCACAGTaGGTGGGTATATACAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LTRASSPALLWLGHPVLLPVYAQ*VGIYSP Trigger: TGGGCTGTATATACCCACCCACTGTGCATAGACAGG...TAGCAGCACTGGGTGGCCTAACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR CCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGCTGAGGTGGCAGCATTaGCCACCAACCACAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: YGFWGWTNSEPWTWACGLLRWQH*PPTTGY Trigger: GTAGCCTGTGGTTGGTGGCCAATGCTGCCACCTCAG...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR CCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGCAGCATGGTCTGAGGTaGCAGCATTGGCCACCAACC | + |
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Preference number: 2 (lower is better) Translates to: YGFWGWTNSEPWTWACGLQHGLR*QHWPPT Trigger: GGTTGGTGGCCAATGCTGCCACCTCAGACCATGCTG...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAACAGCCAAGTGAAGGGTCAGCTCTCCCACACTCACACACCCTTTGCCCATGGTGGGCCCCTGGATaGAATCCTGTCTATGCACAG | + |
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Preference number: 2 (lower is better) Translates to: PQQPSEGSALPHSHTLCPWWAPG*NPVYAQ Trigger: CTGTGCATAGACAGGATTTCATCCAGGGGCCCACCA...TGGGCAAAGGGTGTGTGAGTGTGGGAGAGCTGACCCTTCACTTGGCTGTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCAGGAGCTGTCACGTGACCACCATAGAGTGGGCGGTGCATTCCGTGGTGTGGACTGTAGGCAAGTaGATCCAAGTCAGGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SLRSCHVTTIEWAVHSVVWTVGK*IQVRLT Trigger: TGTGAGCCTGACTTGGATGCACTTGCCTACAGTCCA...CACCACGGAATGCACCGCCCACTCTATGGTGGTCACGTGACAGCTCCTGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| 3UTR CAA 90 bp | GGGAGACGCCAAAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTaGGATGCTGGTGAGGAGCTTTACGAAGCTCTGTCTGCTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRRQRDCMQGSAFPS*DAGEELYEALSASS Trigger: ACTGGAAGCAGACAGAGCTTCGTAAAGCTCCTCACCAGCATCCAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTTTGGCGTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTGGTCCTGTTCTGCACAGCCTTGGACAGCCACGTGGTCACGAGAGGCTGTGCTCTGCCCCTGACTaGCAAAAGAGCAATATCACA | + |
|
Preference number: 2 (lower is better) Translates to: RVGPVLHSLGQPRGHERLCSAPD*QKSNIT Trigger: TGTGATATTGCTCTTTTGTCAGTCAGGGGCAGAGCA...CAGCCTCTCGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCATCACAGGGAAACTTCCCAGGAGTTTCTGCTCCCAGGAAAGCCCTGGTTGGGCTCCAGCATGGCTATaGGTCTGGGATTGCTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: GITGKLPRSFCSQESPGWAPAWL*VWDCFT Trigger: GGTAAAGCAATCCCAGACTCATAGCCATGCTGGAGC...CCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAAGTTTCCCTGTGATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCATAGCCACAGACTCAGACATGGCCCTCACTGGCAGCATGGTCTGAGGTGGGGCCTTCAGTGTGTGTaGTCCATGTATGTCATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHSHRLRHGPHWQHGLRWGLQCV*SMYVIQ Trigger: CTGGATGACATACATGGAGCACACACACTGAAGGCC...CCACCTCAGACCATGCTGCCAGTGAGGGCCATGTCTGAGTCTGTGGCTATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACAACAGCCAAGTGAAGGGTCAGCTCTCCCACACTCACACACCCTTTGCCCACAGCAAGTGAAGGGTTaGTCCTGTTCTGCACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PQQPSEGSALPHSHTLCPQQVKG*SCSAQP Trigger: AGGCTGTGCAGAACAGGACCAACCCTTCACTTGCTG...TGGGCAAAGGGTGTGTGAGTGTGGGAGAGCTGACCCTTCACTTGGCTGTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGAAACTTCCCAGGAGTTTCTGCTCCCAGGAAAGCCCTGGTTGGTGTTTCTCATGGCAGGGAGCCTaGCAGCACACAGGCAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: TGKLPRSFCSQESPGWCFSWQGA*QHTGRC Trigger: ACATCTGCCTGTGTGCTGCCAGGCTCCCTGCCATGA...GAAACACCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAAGTTTCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CAA 90 bp | CCTCACATACAGCTCTGTGGCTGGGCAAAGTCAGACAGTCTGACCTaGGGGATAAGGTGTTTGGAGCTGGCTAATGAGGCATGCCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: PHIQLCGWAKSDSLT*GIRCLELANEACHG Trigger: GCCATGGCATGCCTCATTAGCCAGCTCCAAACACCTTATCCCCAAGGTCAGACTGTCTGACTTTGCCCAGCCACAGAGCTGTATGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGAAACTTCCCAGGAGTTTCTGCTCCCAGGAAAGCCCTGGTTGGTGTTTCCTCGATGTTTACGGCATaGTGCCCCCAGACTTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QGNFPGVSAPRKALVGVSSMFTA*CPQTSA Trigger: TGCAGAAGTCTGGGGGCACCATGCCGTAAACATCGA...GGAAACACCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAAGTTTCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CAA 90 bp | TGGGCGGTGCATTCCGTGGTGTTTCTCTCTTCTGTTGGTTGTTGTTaGTTGCCCAGGCTGACCTTCAACACCCCCAGGGCTCAAAAATCG | + |
|
Preference number: 2 (lower is better) Translates to: WAVHSVVFLSSVGCC*LPRLTFNTPRAQKS Trigger: CGATTTTTGAGCCCTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAACAACAACCAACAGAAGAGAGAAACACCACGGAATGCACCGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 90 bp | AGAGTGGGCGGTGCATTCCGTGGTGTTTCTCTCTTCTGTTGGTTGTaGTTTGTTGCCCAGGCTGACCTTCAACACCCCCAGGGCTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RVGGAFRGVSLFCWL*FVAQADLQHPQGSK Trigger: TTTTGAGCCCTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAACAACAACCAACAGAAGAGAGAAACACCACGGAATGCACCGCCCACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 90 bp | ACGAGAGGCTGCCCCATCAGGGTTTTCCCTTGCTCTCTAGTGGCATaGAGCCTCAGATATGGACACCTATTCTTGCCTCTGCATAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TRGCPIRVFPCSLVA*SLRYGHLFLPLHSH Trigger: GTGGCTATGCAGAGGCAAGAATAGGTGTCCATATCTGAGGCTCAATGCCACTAGAGAGCAAGGGAAAACCCTGATGGGGCAGCCTCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 90 bp | ACTGGCTTGTTCATGCATCCCAACGATTTGCAGATGGTATGGATTTaGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TGLFMHPNDLQMVWI*GMDKFRALDLGLRA Trigger: AGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCTGCAAATCGTTGGGATGCATGAACAAGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGCACAAAACACAAGCTTaGCCATCTTTTCACCGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YGFWGWTNSEPWTWACGLHKTQA*PSFHRR Trigger: CCTGCGGTGAAAAGATGGCCAAGCTTGTGTTTTGTG...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 90 bp | GCGGTGCATTCCGTGGTGTTTCTCTCTTCTGTTGGTTGTTGTTTGTaGCCCAGGCTGACCTTCAACACCCCCAGGGCTCAAAAATCGACT | + |
|
Preference number: 2 (lower is better) Translates to: AVHSVVFLSSVGCCL*PRLTFNTPRAQKST Trigger: AGTCGATTTTTGAGCCCTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAACAACAACCAACAGAAGAGAGAAACACCACGGAATGCACCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 90 bp | GGATCCTCACCGGGACTCCTACAGCTTTGGAACAGCAGGACTGGCTaGTTCATGCATCCCAACGATTTGCAGATGGTATGGATTTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GSSPGLLQLWNSRTG*FMHPNDLQMVWILG Trigger: CCCCAAAATCCATACCATCTGCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGAGTCCCGGTGAGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAATCCTGTCTATGCACAGTGGGTGGGTATATACAGCCCACCTGTGTCATAGTTTGTTGCCCAGGCTaGCCTTCAACACCCCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: MKSCLCTVGGYIQPTCVIVCCPG*PSTPPG Trigger: CCCTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAAC...TATGACACAGGTGGGCTGTATATACCCACCCACTGTGCATAGACAGGATTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGGGTGTATCTGCCTATTaGCAGGGGATTAGAAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: YGFWGWTNSEPWTWACGLGVSAY*QGIRRL Trigger: AAGTCTTCTAATCCCCTGGCAATAGGCAGATACACC...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGGTTGGTCCTGTTCTGCACAGCCTTGGACAGCCACGTGGTCACGAGAGGCATGAAATCCTGTCTATaGACAGTGGGTGGGTATATA | + |
|
Preference number: 2 (lower is better) Translates to: EGLVLFCTALDSHVVTRGMKSCL*TVGGYI Trigger: TATATACCCACCCACTGTGCATAGACAGGATTTCAT...GCCTCTCGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTTTTATTGATTCTGAGTTTCCCATCATGCACCCCAGTCCCACTCATCTCCTCCTGCAGAGCAGGCTaGCATGAAGCTGGTGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLILSFPSCTPVPLISSCRAG*HEAGGP Trigger: GGGCCCACCAGCTTCATGGCAGCCTGCTCTGCAGGA...GGAGATGAGTGGGACTGGGGTGCATGATGGGAAACTCAGAATCAATAAAAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTATGTTTACGGCATGGTaGCCCCAGACTTCTGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SGLKLDLADVSPLVSCRCMFTAW*PQTSAG Trigger: ACCTGCAGAAGTCTGGGGGCACCATGCCGTAAACAT...ACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATGGGAGACGCCAAAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTTGCATGGGCCGTCTTTTTaGTGCCTGTGTTCATCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: KDGRRQRDCMQGSAFPSLHGPSF*CLCSSL Trigger: CAAGGATGAACACAGGCAGCAAAAAGACGGCCCATG...CAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTTTGGCGTCTCCCATCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR-3UTR CCA 90 bp | GCGCTTTCTTCAGCTCTGCGATTCACCTCACATACAGCTCTGTGGCTGGGCAAAAAGATCTCCAACACTTaGCTGAGCACTGGCTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ALSSALRFTSHTALWLGKKISNT*LSTGWF Trigger: GAACCAGCCAGTGCTCAGCCAAGTGTTGGAGATCTT...TTTGCCCAGCCACAGAGCTGTATGTGAGGTGAATCGCAGAGCTGAAGAAAGCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGGTTGGTCCTGTTCTGCACAGCCTTGGACAGCCACGTGGTCACGAGAGGCAACACACAAACACAATaGAAGATATATTCTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: EGLVLFCTALDSHVVTRGNTQTQ*KIYSVA Trigger: GGCCACAGAATATATCTTTCATTGTGTTTGTGTGTT...GCCTCTCGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAGGCAGGGTCAGCTGACAGCACCCATGTCTCCAGAGTTAAGTGCTCTGTTCATGTGCTCTGCCCCTaGCTGACAAAAGAGCAATAT | + |
|
Preference number: 2 (lower is better) Translates to: QEAGSADSTHVSRVKCSVHVLCP*LTKEQY Trigger: ATATTGCTCTTTTGTCAGTCAGGGGCAGAGCACATG...AACAGAGCACTTAACTCTGGAGACATGGGTGCTGTCAGCTGACCCTGCCTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTTTTATTGATTCTGAGTTTCCCATCATGCACCCCAGTCCCACTCATCTCCCAGTGCTGCAGGAGGTaGGGGGCCAGGCTAGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLILSFPSCTPVPLISQCCRR*GARLVF Trigger: GAAAACTAGCCTGGCCCCTCACCTCCTGCAGCACTG...GGAGATGAGTGGGACTGGGGTGCATGATGGGAAACTCAGAATCAATAAAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATCTTTCACCTATGGATGGATGGATGGATGGATGGATGGGCAGACGGATGGAGCATGTGTGAGTACTTaGCTGTGTGCCTGGGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: QSFTYGWMDGWMDGQTDGACVST*LCAWVH Trigger: ATGCACCCAGGCACACAGGCAAGTACTCACACATGC...TCCATCCGTCTGCCCATCCATCCATCCATCCATCCATCCATAGGTGAAAGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACAACAGCCAAGTGAAGGGTCAGCTCTCCCACACTCACACACCCTTTGCCCAATTGAGCCTCAGATATaGACACCTATTCTTGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PQQPSEGSALPHSHTLCPIEPQI*TPILAS Trigger: AGAGGCAAGAATAGGTGTCCATATCTGAGGCTCAAT...TGGGCAAAGGGTGTGTGAGTGTGGGAGAGCTGACCCTTCACTTGGCTGTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTTGGCTGAGCACTGGCTaGTTCACCATGACAATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SGLKLDLADVSPLVSCRCWLSTG*FTMTIA Trigger: AGCAATTGTCATGGTGAACCAGCCAGTGCTCAGCCA...ACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAACACGAGAGTGTGGGGCTCATGCTCTCCTCATCTGTAGGGGCTGTGACAAAAAGGCCCCTGCTTTaGAATGTGGTTGAAGGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: QKHESVGLMLSSSVGAVTKRPLL*NVVEGL Trigger: TAGACCTTCAACCACATTCCAAAGCAGGGGCCTTTT...TGTCACAGCCCCTACAGATGAGGAGAGCATGAGCCCCACACTCTCGTGTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CAA 90 bp | TGTGGCTGGGCAAAGTCAGACAGTCTGACCTTGGGGATAAGGTGTTaGGAGCTGGCTAATGAGGCATGCCATGGCACTGAAGAAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CGWAKSDSLTLGIRC*ELANEACHGTEERK Trigger: TTTTCTTTCTTCAGTGCCATGGCATGCCTCATTAGCCAGCTCCAAACACCTTATCCCCAAGGTCAGACTGTCTGACTTTGCCCAGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGACGCCAAAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTTGGATGCTTACAAGTGGGAAAAATaGGATGGTGACTCTTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GRRQRDCMQGSAFPSLDAYKWEK*DGDSFS Trigger: ACTGAAAGAGTCACCATCTCATTTTTCCCACTTGTA...AGCATCCAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTTTGGCGTCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGAGGCATCTCTGTGCCCCAGCCACCCCACAACAGCCAAGTGAAGGGTCAGAAAGATATATTCTGTaGCCAGTAAACAAGTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: QGRHLCAPATPQQPSEGSERYIL*PVNKCI Trigger: AATGCACTTGTTTACTGGCCACAGAATATATCTTTC...TGACCCTTCACTTGGCTGTTGTGGGGTGGCTGGGGCACAGAGATGCCTCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGGTTGGTCCTGTTCTGCACAGCCTTGGACAGCCACGTGGTCACGAGAGGCCATATTCTGTATGGTTaGGAACATATGTCCATAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EGLVLFCTALDSHVVTRGHILYG*EHMSID Trigger: ATCTATGGACATATGTTCCCAACCATACAGAATATG...GCCTCTCGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 90 bp | GGAGGTTGTTTAATAGTTGGCTCCAGCATGGCTATGAGTCTGGGATaGCTTTACCAGAGTGCAGACTTCACCCTTGTTCCTTCCAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GGCLIVGSSMAMSLG*LYQSADFTLVPSRK Trigger: CTTCCTGGAAGGAACAAGGGTGAAGTCTGCACTCTGGTAAAGCAATCCCAGACTCATAGCCATGCTGGAGCCAACTATTAAACAACCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACTTAAAAGAGTGCCTCACTTCAGTTCTTCTAGTCCTCCACTTTGTATTCTTGTGCATGGGCGTATGTaGGTGTGTGCGTTACGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ALKRVPHFSSSSPPLCILVHGRM*VCALRV Trigger: CACCCGTAACGCACACACGCACATACGCCCATGCAC...AAGAATACAAAGTGGAGGACTAGAAGAACTGAAGTGAGGCACTCTTTTAAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTGAGAGTAAGAGAAAGTaGATGTGTGAGTACTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SGLKLDLADVSPLVSCRCESKRK*MCEYLP Trigger: AGGCAAGTACTCACACATGCACTTTCTCTTACTCTC...ACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTTTTATTGATTCTGAGTTTCCCATCATGCACCCCAGTCCCACTCATCTCCAAGCTGGTGGGCCCCTaGATGAAATCCTGTCTATGC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLILSFPSCTPVPLISKLVGP*MKSCLC Trigger: GCATAGACAGGATTTCATCCAGGGGCCCACCAGCTT...GGAGATGAGTGGGACTGGGGTGCATGATGGGAAACTCAGAATCAATAAAAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCACTGCAAACTGATCTTCTCTGTTGTGATTTCCACCTTGCGCACACTTCCTACCTATCCATAAGATaGACTCCAATCGCAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: IPLQTDLLCCDFHLAHTSYLSIR*TPIAGS Trigger: TGACCCTGCGATTGGAGTTCATCTTATGGATAGGTA...GGAAGTGTGCGCAAGGTGGAAATCACAACAGAGAAGATCAGTTTGCAGTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051510.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTCATGACCTTGTCACCTTTGGAGAGCTCTTCTTGGTGCTCAGTCACTTTGAAGGAAAAAGGCCCCTaGTTTGGAATGTGGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PFMTLSPLESSSWCSVTLKEKGP*FGMWLK Trigger: CTTCAACCACATTCCAAAGCAGGGGCCTTTTTCCTT...CAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTCATGACCTTGTCACCTTTGGAGAGCTCTTCTTGGTGCTCAGTCACTTTGCTGGCGTCATTCTTCTaGGAAGATGTGACAAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PFMTLSPLESSSWCSVTLLASFF*EDVTKS Trigger: AGACTTTGTCACATCTTCCCAGAAGAATGACGCCAG...CAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACTTAAAAGAGTGCCTCACTTCAGTTCTTCTAGTCCTCCACTTTGTATTCTTGAGTACTTGCCTGTGTaGCTGGGTGCATGTAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ALKRVPHFSSSSPPLCILEYLPV*LGACRV Trigger: TACCCTACATGCACCCAGGCACACAGGCAAGTACTC...AAGAATACAAAGTGGAGGACTAGAAGAACTGAAGTGAGGCACTCTTTTAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CAA 90 bp | AGGTCTCTCGCCTTTCATGACCTTGTCACCTTTGGAGAGCTCTTCTaGGTGCTCAGTCACTTTGTAGAATTTCCCACACATCTGATATTT | + |
|
Preference number: 2 (lower is better) Translates to: RSLAFHDLVTFGELF*VLSHFVEFPTHLIF Trigger: AAATATCAGATGTGTGGGAAATTCTACAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGCGAGAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCAAGTTCCAATGTCATTaGTCTCTGCTTTCTATAACT | + |
|
Preference number: 2 (lower is better) Translates to: SYSFGTAGLACSCIPTICKFQCH*SLLSIT Trigger: AGTTATAGAAAGCAGAGAGCAATGACATTGGAACTT...GCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGTGTGTTTTTATTAAAACACACTTTCCCTCCCTGTCTAGAAGATGGCTTGCTGGCGTCATTCTTCTaGGAAGATGTGACAAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: ASVFLLKHTFPPCLEDGLLASFF*EDVTKS Trigger: AGACTTTGTCACATCTTCCCAGAAGAATGACGCCAG...CAAGCCATCTTCTAGACAGGGAGGGAAAGTGTGTTTTAATAAAAACACACTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGTGACTCATTCTCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGCTAATGTGTACCAAATaGGAGAGAGTAAGAGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TSDSFSGLKLDLADVSPLLMCTK*ERVRES Trigger: ACTTTCTCTTACTCTCTCCCATTTGGTACACATTAG...CAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGAGAATGAGTCACTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTCTTCCCAAGCGCATGTGCTCCTAAGAAAAGAAATTCAGTCATAACGCTGCCTACAATTGAATTATaGCAGCACACACTTAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: QLFPSACAPKKRNSVITLPTIEL*QHTLKH Trigger: ATGCTTAAGTGTGTGCTGCCATAATTCAATTGTAGG...CAGCGTTATGACTGAATTTCTTTTCTTAGGAGCACATGCGCTTGGGAAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTCTTCCCAAGCGCATGTGCTCCTAAGAAAAGAAATTCAGTCATAACGCTGGTTCTTAATGTGCTTTaGGACAATCTTTCACCTATG | + |
|
Preference number: 2 (lower is better) Translates to: QLFPSACAPKKRNSVITLVLNVL*DNLSPM Trigger: CATAGGTGAAAGATTGTCCCAAAGCACATTAAGAAC...CAGCGTTATGACTGAATTTCTTTTCTTAGGAGCACATGCGCTTGGGAAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTAGATAATCTGAGGCTCAGGGATGAGCAGCAAGCCATCCAGGTTATCCAGAGCCTCTCTATCAAATaGTACAAATGGTGTCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: FVDNLRLRDEQQAIQVIQSLSIK*YKWCLI Trigger: AATAAGACACCATTTGTACCATTTGATAGAGAGGCT...CTGGATAACCTGGATGGCTTGCTGCTCATCCCTGAGCCTCAGATTATCTACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAAGAAAAGGCAGCAGTCCCAGAAGAACTGAAATTAACACCCACAGCAGTGGCACATGTTAGTGAATaGCAAAATGCACAGATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: KKEKAAVPEELKLTPTAVAHVSE*QNAQIY Trigger: ATAAATCTGTGCATTTTGCCATTCACTAACATGTGC...CACTGCTGTGGGTGTTAATTTCAGTTCTTCTGGGACTGCTGCCTTTTCTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTAGAAAAGGTCGTTCATGTTAGTTTGGCTAGCTGGATTAATTTCTTCCAATACCTATCCATAAGATaGACTCCAATCGCAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLEKVVHVSLASWINFFQYLSIR*TPIAGS Trigger: TGACCCTGCGATTGGAGTTCATCTTATGGATAGGTA...TTGGAAGAAATTAATCCAGCTAGCCAAACTAACATGAACGACCTTTTCTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200224.5 |
||
| 3UTR CAA 90 bp | CCTCCCTGTCTAGAAGATGGCTTGAAACCTCTCAGCTCTTTTACTTaGTATCTTACTGCATTTTATGAATGTGAACCAACAGTAGTATTT | + |
|
Preference number: 2 (lower is better) Translates to: PPCLEDGLKPLSSFT*YLTAFYECEPTVVF Trigger: AAATACTACTGTTGGTTCACATTCATAAAATGCAGTAAGATACAAAGTAAAAGAGCTGAGAGGTTTCAAGCCATCTTCTAGACAGGGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR-3UTR CCA 90 bp | GATGAACATATAGATTCTTGGATGAAACACCTAAGATTCTCCTCAGACATGAATGTTTCTCTCTTCTGTTaGTTGTTGTTTGTTGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: DEHIDSWMKHLRFSSDMNVSLFC*LLFVAQ Trigger: CTGGGCAACAAACAACAACCAACAGAAGAGAGAAAC...ATTCATGTCTGAGGAGAATCTTAGGTGTTTCATCCAAGAATCTATATGTTCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | CTGCTGAGCTGCTCAGCCTGCCAGCTCTCCCTTACCTaGTCACCAGGGCGAGCTCTCCAGCACTGCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLSCSACQLSLT*SPGRALQHCSG Trigger: ACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAGCAGGTAAGGGAGAGCTGGCAGGCTGAGCAGCTCAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | TACCTGCTCACCAGGGCGAGCTCTCCAGCACTGCTCTaGTTAGGCCACCCAGTGCTGCTACTGGCAAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YLLTRASSPALL*LGHPVLLLARG Trigger: GCCTCTTGCCAGTAGCAGCACTGGGTGGCCTAACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAGCAGGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | CACTGGTCTCCTGCCGATGTGTCTCCACTGGTCTCCTaGGGCTGGGCTGCTTGTCCAGCTTCCACTCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: HWSPADVSPLVS*GWAACPASTQT Trigger: CGTCTGAGTGGAAGCTGGACAAGCAGCCCAGCCTCAGGAGACCAGTGGAGACACATCGGCAGGAGACCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | GGCCAGCTCTCTAGAGGGCTGCAGCAAGTGAAGGGTTaGTCCTGTTCTGCACAGCCTTGGACAGCCACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GQLSRGLQQVKG*SCSAQPWTATW Trigger: CCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACCCTTCACTTGCTGCAGCCCTCTAGAGAGCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | GTATTATCTGAGCCACCGGGAGCTGCTCAGCATACTTaGGAGGTCCCATGCGCTCCTCGGCCGTGCCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLSEPPGAAQHT*EVPCAPRPCRL Trigger: AAGACGGCACGGCCGAGGAGCGCATGGGACCTCTCAAGTATGCTGAGCAGCTCCCGGTGGCTCAGATAATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051510.9 ENSMUST00000200224.5 |
||
| 3UTR TCA 72 bp | AGGCGAAGGGCCAGCTCTCTAGAGGGCTGCAGCAAGTaGAGGGTTGGTCCTGTTCTGCACAGCCTTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RRRASSLEGCSK*RVGPVLHSLGQ Trigger: CTGTCCAAGGCTGTGCAGAACAGGACCAACCCTTCACTTGCTGCAGCCCTCTAGAGAGCTGGCCCTTCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | GCATCTCTGTGCCCCAGCCACCCCACAACAGCCAAGTaGAGGGTCAGCTCTCCCACACTCACACACCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ASLCPSHPTTAK*RVSSPTLTHPL Trigger: CAAAGGGTGTGTGAGTGTGGGAGAGCTGACCCTTCACTTGGCTGTTGTGGGGTGGCTGGGGCACAGAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | GATGAAGCCTCCGGGAGGGTGCCAGTCTCTCGGCTTTaGCTTCTGGTGTATTATCTGAGCCACCGGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DEASGRVPVSRL*LLVYYLSHREL Trigger: CAGCTCCCGGTGGCTCAGATAATACACCAGAAGCCAAAGCCGAGAGACTGGCACCCTCCCGGAGGCTTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051510.9 ENSMUST00000200224.5 |
||
| 3UTR CCA 72 bp | CAGCCCACCTGTGTCATACATCAGAGAGCAGGTCTGTaGGTGGCACGTGGTCCATGGTCCACAGGCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QPTCVIHQRAGL*VARGPWSTGLC Trigger: ACAGAGGCCTGTGGACCATGGACCACGTGCCACCCACAGACCTGCTCTCTGATGTATGACACAGGTGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | CCTCTGCATAGCCACAGACTCAGACATGGCCCTCACTaGCAGCATGGTCTGAGGTGGCAGCATTGGCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: PLHSHRLRHGPH*QHGLRWQHWPP Trigger: TGGTGGCCAATGCTGCCACCTCAGACCATGCTGCCAGTGAGGGCCATGTCTGAGTCTGTGGCTATGCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | GGTTGGTCCTGTTCTGCACAGCCTTGGACAGCCACGTaGTCACGAGAGGCTGCCCCATCAGGGTTTTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GWSCSAQPWTAT*SREAAPSGFSL Trigger: AAGGGAAAACCCTGATGGGGCAGCCTCTCGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | ACAGCACCCATGTCTCCAGAGTTAAGTGCTCTGTTCTaGCCAGTCAAGGTGTGGGCCCACTCTCCCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TAPMSPELSALF*PVKVWAHSPQC Trigger: GCACTGGGGAGAGTGGGCCCACACCTTGACTGGGCAGAACAGAGCACTTAACTCTGGAGACATGGGTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | CATCAGAGAGCAGGTCTGTGGGTGGCACGTGGTCCATaGTCCACAGGCCTCTGTCTACTGTCTTCCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HQRAGLWVARGP*STGLCLLSSSQ Trigger: TTGGGAGGAAGACAGTAGACAGAGGCCTGTGGACCATGGACCACGTGCCACCCACAGACCTGCTCTCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | CCACCTGTGTCATACATCAGAGAGCAGGTCTGTGGGTaGCACGTGGTCCATGGTCCACAGGCCTCTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PPVSYIREQVCG*HVVHGPQASVY Trigger: GTAGACAGAGGCCTGTGGACCATGGACCACGTGCCACCCACAGACCTGCTCTCTGATGTATGACACAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | CCTGCAGAGCAGGCTGCCATGAAGCTGGTGGGCCCCTaGATGAAATCCTGTCTATGCACAGTGGGTGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PAEQAAMKLVGP*MKSCLCTVGGY Trigger: ATACCCACCCACTGTGCATAGACAGGATTTCATCCAGGGGCCCACCAGCTTCATGGCAGCCTGCTCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | TCCCACACTCACACACCCTTTGCCCAGGCCACCTCATaGCAGAGGAGTAGCAGGATCAGCTCTCCCTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: SHTHTPFAQATS*QRSSRISSPSH Trigger: ATGTGAGGGAGAGCTGATCCTGCTACTCCTCTGCCATGAGGTGGCCTGGGCAAAGGGTGTGTGAGTGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGGCAGGGTCAGCTGACAGCACCCATGTCTCCAGAGTTAAGTGCTCTGTTCTGTTCTGCACAGCCTaGGACAGCCACGTGGTCACG | + |
|
Preference number: 3 (lower is better) Translates to: QEAGSADSTHVSRVKCSVLFCTA*DSHVVT Trigger: CGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAG...AACAGAGCACTTAACTCTGGAGACATGGGTGCTGTCAGCTGACCCTGCCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | AAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTaGCGATGTGTCTCCACTGGTCTCCTGAGGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLDLADVSPLVS*RCVSTGLLRLG Trigger: GCCCAGCCTCAGGAGACCAGTGGAGACACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | GGGTCCCTCAGGAGCTGTCACGTGACCACCATAGAGTaGGCGGTGCATTCCGTGGTGTTTCTCTCTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GSLRSCHVTTIE*AVHSVVFLSSV Trigger: AACAGAAGAGAGAAACACCACGGAATGCACCGCCCACTCTATGGTGGTCACGTGACAGCTCCTGAGGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCAGGAGCTGTCACGTGACCACCATAGAGTGGGCGGTGCATTCCGTGGTGTCTCTCTTCTGTTGGTaGTTGTTTGTTGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLRSCHVTTIEWAVHSVVSLFCW*LFVAQA Trigger: AGCCTGGGCAACAAACAACAACCAACAGAAGAGAGA...CACCACGGAATGCACCGCCCACTCTATGGTGGTCACGTGACAGCTCCTGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTCTGAGGCTGGGCTGCTaGTCCAGCTTCCACTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SGLKLDLADVSPLVSCRCLRLGC*SSFHSD Trigger: GTCTGAGTGGAAGCTGGACAAGCAGCCCAGCCTCAG...ACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR TCA 72 bp | CATGCAGGGCTCAGCTTTCCCATCCTTGGATGCTGGTaGGGAGCTTTACGAAGCTCTGTCTGCTTCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HAGLSFPILGCW*GALRSSVCFQS Trigger: GGACTGGAAGCAGACAGAGCTTCGTAAAGCTCCTCACCAGCATCCAAGGATGGGAAAGCTGAGCCCTGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR GCA 72 bp | GTGGTCACGAGAGGCTGCCCCATCAGGGTTTTCCCTTaGTCTCTAGTGGCATTGAGCCTCAGATATGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: VVTRGCPIRVFP*SLVALSLRYGH Trigger: GTGTCCATATCTGAGGCTCAATGCCACTAGAGAGCAAGGGAAAACCCTGATGGGGCAGCCTCTCGTGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | GGCTGTGGCATCACAGGGAAACTTCCCAGGAGTTTCTaGTCCCAGGAAAGCCCTGGTTGGTGTTTCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GCGITGKLPRSF*SQESPGWCFLL Trigger: AAGCAGGAAACACCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAAGTTTCCCTGTGATGCCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGTCTGTTGGTTGTTGTTaGTTGCCCAGGCTGACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YGFWGWTNSEPWTWACGLSVGCC*LPRLTF Trigger: GAAGGTCAGCCTGGGCAACAAACAACAACCAACAGA...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGCTCTTCTGTTGGTTGTaGTTTGTTGCCCAGGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YGFWGWTNSEPWTWACGLLFCWL*FVAQAD Trigger: GTCAGCCTGGGCAACAAACAACAACCAACAGAAGAG...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | CTCTGCAGTGCATCTGGAAAGCGCTTTCTTCAGCTCTaGGATTCACCTCACATACAGCTCTGTGGCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LCSASGKRFLQL*DSPHIQLCGWA Trigger: TGCCCAGCCACAGAGCTGTATGTGAGGTGAATCGCAGAGCTGAAGAAAGCGCTTTCCAGATGCACTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | TGTACTTATTACCCTATAGGCAGCTTTCCTGACTGGTaGAGGCTACAAGGGAGGCATCTCTGTGCCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CTYYPIGSFPDW*RLQGRHLCAPA Trigger: GGCTGGGGCACAGAGATGCCTCCCTTGTAGCCTCCACCAGTCAGGAAAGCTGCCTATAGGGTAATAAGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | CCCTGTACTTATTACCCTATAGGCAGCTTTCCTGACTaGTGGAGGCTACAAGGGAGGCATCTCTGTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PCTYYPIGSFPD*WRLQGRHLCAP Trigger: TGGGGCACAGAGATGCCTCCCTTGTAGCCTCCACCAGTCAGGAAAGCTGCCTATAGGGTAATAAGTACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | ATCCCAACGATTTGCAGATGGTATGGATTTTGGGGATaGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: IPTICRWYGFWG*TNSEPWTWACG Trigger: CCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCTGCAAATCGTTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | CTCTGGAGCTGTGTGACAGGATCGATGTTTACGGCATaGTGCCCCCAGACTTCTGCAGGTAGGATTGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: LWSCVTGSMFTA*CPQTSAGRIDS Trigger: GGAATCAATCCTACCTGCAGAAGTCTGGGGGCACCATGCCGTAAACATCGATCCTGTCACACAGCTCCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | TCTCCCTTCCCAAAGTGCGGAGCTCTGCAGTGCATCTaGAAAGCGCTTTCTTCAGCTCTGCGATTCACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPFPKCGALQCI*KALSSALRFTS Trigger: TGAGGTGAATCGCAGAGCTGAAGAAAGCGCTTTCCAGATGCACTGCAGAGCTCCGCACTTTGGGAAGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCATGGTCCACAGGCCTCTGTCTACTGTCTTCCTCCCAAGGTGCCTCAATTGTTGGTTGTTGTTTGTaGCCCAGGCTGACCTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GPWSTGLCLLSSSQGASIVGCCL*PRLTFN Trigger: GTTGAAGGTCAGCCTGGGCAACAAACAACAACCAAC...AATTGAGGCACCTTGGGAGGAAGACAGTAGACAGAGGCCTGTGGACCATGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGTATGGACACCTATTCTaGCCTCTGCATAGCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: YGFWGWTNSEPWTWACGLYGHLF*PLHSHR Trigger: TCTGTGGCTATGCAGAGGCAAGAATAGGTGTCCATA...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | TTTACGAAGCTCTGTCTGCTTCCAGTCCAACCAGGTTaGATTCGGCCATTGCATCCACTCAAGGCAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FTKLCLLPVQPG*IRPLHPLKAAP Trigger: GGGAGCTGCCTTGAGTGGATGCAATGGCCGAATTCAACCTGGTTGGACTGGAAGCAGACAGAGCTTCGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR GCA 72 bp | CTGTTTAACAGTCTCCCTTCCCAAAGTGCGGAGCTCTaGAGTGCATCTGGAAAGCGCTTTCTTCAGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LFNSLPSQSAEL*SASGKRFLQLC Trigger: GCAGAGCTGAAGAAAGCGCTTTCCAGATGCACTGCAGAGCTCCGCACTTTGGGAAGGGAGACTGTTAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR GCA 72 bp | CTCAGACTTTGTCTCACCTTTTCCTGTAGCAAGGGCTaGTGTGCTGGCCCTGTAGGTTCCAAACCATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRLCLTFSCSKG*CAGPVGSKPFP Trigger: GGGAAATGGTTTGGAACCTACAGGGCCAGCACAGCAGCCCTTGCTACAGGAAAAGGTGAGACAAAGTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CCA 72 bp | GGGCCCCTGGATGAAATCCTGTCTATGCACAGTGGGTaGGTATATACAGCCCACCTGTGTCATACATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPLDEILSMHSG*VYTAHLCHTSE Trigger: CTCTGATGTATGACACAGGTGGGCTGTATATACCCACCCACTGTGCATAGACAGGATTTCATCCAGGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTGTCTCAGACTTTGTCTCACCTTTTCCTGTAGCAAGGGCTGCTGTGCTGGCTCGCCTTTCATGACCTaGTCACCTTTGGAGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HCLRLCLTFSCSKGCCAGSPFMT*SPLESS Trigger: AGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGCGA...GCCAGCACAGCAGCCCTTGCTACAGGAAAAGGTGAGACAAAGTCTGAGACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTTTTATTGATTCTGAGTTTCCCATCATGCACCCCAGTCCCACTCATCTCCACACTCACACACCCTTaGCCCAGGCCACCTCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KFLLILSFPSCTPVPLISTLTHP*PRPPHG Trigger: GCCATGAGGTGGCCTGGGCAAAGGGTGTGTGAGTGT...GGAGATGAGTGGGACTGGGGTGCATGATGGGAAACTCAGAATCAATAAAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | TTGGGGATAAGGTGTTTGGAGCTGGCTAATGAGGCATaGCATGGCACTGAAGAAAGAAAAGGCAGCAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGIRCLELANEA*HGTEERKGSSP Trigger: GGGACTGCTGCCTTTTCTTTCTTCAGTGCCATGGCATGCCTCATTAGCCAGCTCCAAACACCTTATCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR GCA 72 bp | GTTTCTGCTCCCAGGAAAGCCCTGGTTGGTGTTTCCTaGTTTGTAGATAATCTGAGGCTCAGGGATGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSAPRKALVGVS*FVDNLRLRDEQ Trigger: CTGCTCATCCCTGAGCCTCAGATTATCTACAAAGCAGGAAACACCAACCAGGGCTTTCCTGGGAGCAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | CTTTCAGTTTCCCGGCTACTTGGACGACAGCGATCATaGGCCGTCTTTTTGCTGCCTGTGTTCATCCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSVSRLLGRQRS*AVFLLPVFILV Trigger: TACAAGGATGAACACAGGCAGCAAAAAGACGGCCCATGATCGCTGTCGTCCAAGTAGCCGGGAAACTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR TCA 72 bp | TTCTCTCTTCTGTTGGTTGTTGTTTGTTGCCCAGGCTaGCCTTCAACACCCCCAGGGCTCAAAAATCGACTC | + |
|
Preference number: 3 (lower is better) Translates to: FSLLLVVVCCPG*PSTPPGLKNRL Trigger: GAGTCGATTTTTGAGCCCTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAACAACAACCAACAGAAGAGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | AAATCTATAGGCACAGCCCACCCCAGCACGGCTCTCTaGTGCCAAAGTCTGAAAGAGAAAAGAGTGTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSIGTAHPSTAL*CQSLKEKRVSE Trigger: CTCAGACACTCTTTTCTCTTTCAGACTTTGGCATCAGAGAGCCGTGCTGGGGTGGGCTGTGCCTATAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | TTTTCCCTGTACTTATTACCCTATAGGCAGCTTTCCTaGCTGGTGGAGGCTACAAGGGAGGCATCTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSLYLLPYRQLS*LVEATREASLC Trigger: GCACAGAGATGCCTCCCTTGTAGCCTCCACCAGTCAGGAAAGCTGCCTATAGGGTAATAAGTACAGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | CAGCATGGCTATGAGTCTGGGATTGCTTTACCAGAGTaGAGACTTCACCCTTGTTCCTTCCAGGAAGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: QHGYESGIALPE*RLHPCSFQEDL Trigger: GAGATCTTCCTGGAAGGAACAAGGGTGAAGTCTGCACTCTGGTAAAGCAATCCCAGACTCATAGCCATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | TTCAGTGTGTGTGCTCCATGTATGTCATCCAGTTTATaGGGCTGTCCTCAGGGACAGCATAGATCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FSVCAPCMSSSL*GCPQGQHRSSC Trigger: ACAGCTGGATCTATGCTGTCCCTGAGGACAGCCCCATAAACTGGATGACATACATGGAGCACACACACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGTGACTCATTCTCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGTCGCCTTTCATGACCTaGTCACCTTTGGAGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TSDSFSGLKLDLADVSPLSPFMT*SPLESS Trigger: AGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGCGA...CAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGAGAATGAGTCACTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR TCA 72 bp | AGGCAAGTGCATCCAAGTCAGGCTCACAGTATATCCTaGAGGATGTCCGAGGGCGGAGAAAGGTTAATAATG | + |
|
Preference number: 3 (lower is better) Translates to: RQVHPSQAHSIS*RMSEGGERLIM Trigger: CATTATTAACCTTTCTCCGCCCTCGGACATCCTTCAGGATATACTGTGAGCCTGACTTGGATGCACTTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | GGACTGGCTTGTTCATGCATCCCAACGATTTGCAGATaGTATGGATTTTGGGGATGGACAAATTCAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLACSCIPTICR*YGFWGWTNSEP Trigger: GGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCTGCAAATCGTTGGGATGCATGAACAAGCCAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGAAAAGGCAGCAGTCCCAGAAGAACTGAAATTAACACCCACAGCAGTGGAAGATCTCCAACACTaGGCTGAGCACTGGCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KKEKAAVPEELKLTPTAVEDLQH*AEHWLV Trigger: AACCAGCCAGTGCTCAGCCAAGTGTTGGAGATCTTC...CACTGCTGTGGGTGTTAATTTCAGTTCTTCTGGGACTGCTGCCTTTTCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGGCAGGGTCAGCTGACAGCACCCATGTCTCCAGAGTTAAGTGCTCTGTTAAAGTTCCAATGTCATaGCTCTCTGCTTTCTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: QEAGSADSTHVSRVKCSVKVPMS*LSAFYN Trigger: GTTATAGAAAGCAGAGAGCAATGACATTGGAACTTT...AACAGAGCACTTAACTCTGGAGACATGGGTGCTGTCAGCTGACCCTGCCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTGTCTCACATCTGATATTTTCTaGTCATTAGCCTGGCGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TQIRPCRCVSTGLLPMCLTSDIF*SLAWRH Trigger: ATGACGCCAGGCTAATGACAAGAAAATATCAGATGT...GAGACACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTAGATAATCTGAGGCTCAGGGATGAGCAGCAAGCCATCCAGGTTATCCAGTTTGGAGAGCTCTTCTaGGTGCTCAGTCACTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FVDNLRLRDEQQAIQVIQFGELF*VLSHFV Trigger: TACAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAA...CTGGATAACCTGGATGGCTTGCTGCTCATCCCTGAGCCTCAGATTATCTACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCGATTCTTTCAGGAAGACAGAACAAAGCAGTTGCGTTTCTATGGTGTGTGGTGCAGACTTCACCCTaGTTCCTTCCAGGAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: VPILSGRQNKAVAFLWCVVQTSP*FLPGRS Trigger: AGATCTTCCTGGAAGGAACAAGGGTGAAGTCTGCAC...CACACACCATAGAAACGCAACTGCTTTGTTCTGTCTTCCTGAAAGAATCGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR TCA 72 bp | CGTGCCGTCTTCTTTAGAACTGCTGTCCACGACTTGTaGATCCCACTGCAAACTGATCTTCTCTGTTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RAVFFRTAVHDL*IPLQTDLLCCD Trigger: ATCACAACAGAGAAGATCAGTTTGCAGTGGGATTCACAAGTCGTGGACAGCAGTTCTAAAGAAGACGGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051510.9 |
||
| 3UTR TCA 72 bp | GCTAGGATGAACAAGGACTGCCATGTGCTCTGCCCCTaGCTGACAAAAGAGCAATATCACAAACAAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ARMNKDCHVLCP*LTKEQYHKQGV Trigger: TACACCTTGTTTGTGATATTGCTCTTTTGTCAGTCAGGGGCAGAGCACATGGCAGTCCTTGTTCATCCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | CAAACCATTTCCCTACAAGTGGGAAAAATGAGATGGTaGCTCTTTCAGTTTCCCGGCTACTTGGACGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QTISLQVGKMRW*LFQFPGYLDDS Trigger: GCTGTCGTCCAAGTAGCCGGGAAACTGAAAGAGTCACCATCTCATTTTTCCCACTTGTAGGGAAATGGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR GCA 72 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATaGATCCCAACGATTTGCAGATGGTATGGATTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SYSFGTAGLACS*IPTICRWYGFW Trigger: CCAAAATCCATACCATCTGCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCGCATATTCTGTATGGTaGGGAACATATGTCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SYSFGTAGLACSCIPTICAYSVW*GTYVHR Trigger: TCTATGGACATATGTTCCCAACCATACAGAATATGC...GCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCGATTCTTTCAGGAAGACAGAACAAAGCAGTTGCGTTTCTATGGTGTGTGAGGAGGAAAACATGTTaGAAGCTGAAGCCCACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VPILSGRQNKAVAFLWCVRRKTC*KLKPTH Trigger: ATGGGTGGGCTTCAGCTTCAAACATGTTTTCCTCCT...CACACACCATAGAAACGCAACTGCTTTGTTCTGTCTTCCTGAAAGAATCGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR GCA 72 bp | CCTTCTGTCCACACATCTTTCCTTGTAAATGTCCACTaGAATGAGTCATTGGTCTGGCTTGAGGTCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PSVHTSFLVNVH*NESLVWLEVFG Trigger: ACCAAAGACCTCAAGCCAGACCAATGACTCATTGCAGTGGACATTTACAAGGAAAGATGTGTGGACAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTAAAAGAGTGCCTCACTTCAGTTCTTCTAGTCCTCCACTTTGTATTCTTTTGGGGATAAGGTGTTaGGAGCTGGCTAATGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALKRVPHFSSSSPPLCILLGIRC*ELANEA Trigger: TGCCTCATTAGCCAGCTCCAAACACCTTATCCCCAA...AAGAATACAAAGTGGAGGACTAGAAGAACTGAAGTGAGGCACTCTTTTAAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR TCA 72 bp | TTGTCATTAGCCTGGCGTCATTCTTCTGGGAAGATGTaGCAAAGTCTTACGAGCCTCTCTATCAAATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLAWRHSSGKM*QSLTSLSIKWY Trigger: GTACCATTTGATAGAGAGGCTCGTAAGACTTTGTCACATCTTCCCAGAAGAATGACGCCAGGCTAATGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CCA 72 bp | TTCCTTGTAAATGTCCACTGCAATGAGTCATTGGTCTaGCTTGAGGTCTTTGGTTTCTGTGACATCATCACT | + |
|
Preference number: 3 (lower is better) Translates to: FLVNVHCNESLV*LEVFGFCDIIT Trigger: AGTGATGATGTCACAGAAACCAAAGACCTCAAGCCAGACCAATGACTCATTGCAGTGGACATTTACAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | AAAGCAAAGCATAGAAACATTTCATCGAGGAAGCTGTaGTGTCACAGTGAGTCTCACAGTAAACCTTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KAKHRNISSRKL*CHSESHSKPSV Trigger: GACAGAAGGTTTACTGTGAGACTCACTGTGACACCACAGCTTCCTCGATGAAATGTTTCTATGCTTTGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTAAAAGAGTGCCTCACTTCAGTTCTTCTAGTCCTCCACTTTGTATTCTTTTTGGAGAGCTCTTCTaGGTGCTCAGTCACTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ALKRVPHFSSSSPPLCILFGELF*VLSHFV Trigger: TACAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAA...AAGAATACAAAGTGGAGGACTAGAAGAACTGAAGTGAGGCACTCTTTTAAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR TCA 72 bp | TCTCTGATGCCAAAGTCTGAAAGAGAAAAGAGTGTCTaGGAATGGTCACAAAACACAAGCTTGGCCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLMPKSEREKSV*EWSQNTSLAIF Trigger: AAAGATGGCCAAGCTTGTGTTTTGTGACCATTCTCAGACACTCTTTTCTCTTTCAGACTTTGGCATCAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | AGTTCCGATTCTTTCAGGAAGACAGAACAAAGCAGTTaGGTTTCTATGGTGTGTGATCCCAAGGCTATTATT | + |
|
Preference number: 3 (lower is better) Translates to: SSDSFRKTEQSS*VSMVCDPKAII Trigger: AATAATAGCCTTGGGATCACACACCATAGAAACGCAACTGCTTTGTTCTGTCTTCCTGAAAGAATCGGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | CTTTCAGGAAGACAGAACAAAGCAGTTGCGTTTCTATaGTGTGTGATCCCAAGGCTATTATTTAGGAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSGRQNKAVAFL*CVIPRLLFRKS Trigger: AGACTTCCTAAATAATAGCCTTGGGATCACACACCATAGAAACGCAACTGCTTTGTTCTGTCTTCCTGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | CAAAGTCTTACGAGCCTCTCTATCAAATGGTACAAATaGTGTCTTATTACTAATGATGCTGAGGCAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QSLTSLSIKWYK*CLITNDAEAGF Trigger: GAACCCTGCCTCAGCATCATTAGTAATAAGACACCATTTGTACCATTTGATAGAGAGGCTCGTAAGACTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR TCA 72 bp | CTTCCTCCCAAGGTGCCTCAATTTGATTTGATGATTTaGTTTTTATGTGTCCTAGGCATGACACAACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPPKVPQFDLMI*FLCVLGMTQLW Trigger: CCAAAGTTGTGTCATGCCTAGGACACATAAAAATCAAATCATCAAATCAAATTGAGGCACCTTGGGAGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR TCA 72 bp | CTCTGTCTACTGTCTTCCTCCCAAGGTGCCTCAATTTaGTTTGATGATTTGATTTTTATGTGTCCTAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCLLSSSQGASI*FDDLIFMCPRH Trigger: ATGCCTAGGACACATAAAAATCAAATCATCAAATCAAATTGAGGCACCTTGGGAGGAAGACAGTAGACAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | AAATTCAGTCATAACGCTGGTGTTCTTAATGTGCTTTaGGACAATCTTTCACCTATGGATGGATGGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KFSHNAGVLNVL*DNLSPMDGWMD Trigger: ATCCATCCATCCATCCATAGGTGAAAGATTGTCCCAAAGCACATTAAGAACACCAGCGTTATGACTGAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | TGGCCACATGGATATTGGCATCCTACAATTGAATTATaGCAGCACACACTTAAGCATTCAAACAATGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: WPHGYWHPTIEL*QHTLKHSNNDH Trigger: ATGATCATTGTTTGAATGCTTAAGTGTGTGCTGCCATAATTCAATTGTAGGATGCCAATATCCATGTGGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR CCA 72 bp | CTTCCACTCAGACGTCTGAATGCACATGTTAGTGAATaGCAAAATGCACAGATTTATTTCCTTAAACTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPLRRLNAHVSE*QNAQIYFLKLV Trigger: GACAAGTTTAAGGAAATAAATCTGTGCATTTTGCCATTCACTAACATGTGCATTCAGACGTCTGAGTGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAAGATGGCTTGAAACCTCTCAGCTCTTTTACTTTGTATCTTACTGCATTACATCTGATATTTTCTaGTCATTAGCCTGGCGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SRRWLETSQLFYFVSYCITSDIF*SLAWRH Trigger: ATGACGCCAGGCTAATGACAAGAAAATATCAGATGT...AATGCAGTAAGATACAAAGTAAAAGAGCTGAGAGGTTTCAAGCCATCTTCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR TCA 72 bp | CAGCTGTCAGCAATCTGTCTCTTTCAGGACAAAAACTaGAGAGATACAATCAATTCTAGAAGTTCACAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: QLSAICLFQDKN*RDTINSRSSQY Trigger: ATACTGTGAACTTCTAGAATTGATTGTATCTCTTCAGTTTTTGTCCTGAAAGAGACAGATTGCTGACAGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR GCA 72 bp | AAAGAGCAATATCACAAACAAGGTGTATCTGCCTATTaGCAGGGGATTAGAAGACTTCTTAATTGTTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: KEQYHKQGVSAY*QGIRRLLNCYL Trigger: TAGGTAACAATTAAGAAGTCTTCTAATCCCCTGGCAATAGGCAGATACACCTTGTTTGTGATATTGCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CCA 72 bp | TTTATTAAAACACACTTTCCCTCCCTGTCTAGAAGATaGCTTGAAACCTCTCAGCTCTTTTACTTTGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: FIKTHFPSLSRR*LETSQLFYFVS Trigger: AGATACAAAGTAAAAGAGCTGAGAGGTTTCAAGCCATCTTCTAGACAGGGAGGGAAAGTGTGTTTTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CCA 72 bp | AATTTTCTCATTAATAACAAATGGCCACATGGATATTaGCATCCTACAATTGAATTATGGCAGCACACACTT | + |
|
Preference number: 3 (lower is better) Translates to: NFLINNKWPHGY*HPTIELWQHTL Trigger: AAGTGTGTGCTGCCATAATTCAATTGTAGGATGCCAATATCCATGTGGCCATTTGTTATTAATGAGAAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCAGGGCGAGCTCTCCAGCACTGCTCTGGTTAGGCCACCCAGTGCTGCTAACACTGTGGCTGGCTTaGGGTTCCGAGCATTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LTRASSPALLWLGHPVLLTLWLA*GSEHCT Trigger: CGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGT...TAGCAGCACTGGGTGGCCTAACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | TGGCCCTCACTGGCAGCATGGTCTGAGGTGGCAGCATaGGCCACCAACCACAGGCTACTCCTCTCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WPSLAAWSEVAA*ATNHRLLLSTL Trigger: AAGGGTGGAGAGGAGTAGCCTGTGGTTGGTGGCCAATGCTGCCACCTCAGACCATGCTGCCAGTGAGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGGTTCTCAGGGGGCATCCTGGGAACATGCGGATAAGGAAAAAGGCCCCTTGAGCGAGGGGTACTaGGTGGAACCCTCCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGSQGASWEHADKEKGPLSEGY*VEPSRS Trigger: TGACCGGGAGGGTTCCACCCAGTACCCCTCGCTCAA...GGGGCCTTTTTCCTTATCCGCATGTTCCCAGGATGCCCCCTGAGAACCCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR TCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGGGAAAGAAGACGCTTTaGGCGAGGGGTACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGFWGWTNSEPWTWACGLGKKTL*ARGTGW Trigger: CCACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCC...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAACACGAGAGTGTGGGGCTCATGCTCTCCTCATCTGTAGGGGCTGTGACATTGAGCGAGGGGTACTaGGTGGAACCCTCCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKHESVGLMLSSSVGAVTLSEGY*VEPSRS Trigger: TGACCGGGAGGGTTCCACCCAGTACCCCTCGCTCAA...TGTCACAGCCCCTACAGATGAGGAGAGCATGAGCCCCACACTCTCGTGTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGAAACTTCCCAGGAGTTTCTGCTCCCAGGAAAGCCCTGGTTGGTGTTTCCGCTGCTCAGCATACTTaGGAGGTCCCATGCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGNFPGVSAPRKALVGVSAAQHT*EVPCAP Trigger: AGGAGCGCATGGGACCTCTCAAGTATGCTGAGCAGC...GGAAACACCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAAGTTTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGCCTCTTCAGGTCTCTCGCCTTTCATGACCTTGTCACCTTTGGAGAGACACTGTGGCTGGCTTaGGGTTCCGAGCATTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ALSLFRSLAFHDLVTFGETLWLA*GSEHCT Trigger: CGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGT...CTCTCCAAAGGTGACAAGGTCATGAAAGGCGAGAGACCTGAAGAGGCTGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCTTCCAGTCCAACCAGGTTGAATTCGGCCATTGCATCCACTCAAGGCAGGGAAAGAAGACGCTTTaGGCGAGGGGTACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCFQSNQVEFGHCIHSRQGKKTL*ARGTGW Trigger: CCACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCC...CTGCCTTGAGTGGATGCAATGGCCGAATTCAACCTGGTTGGACTGGAAGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR TCA 90 bp | AAAGATGGGAGACGCCAAAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTTGGCTGCTCAGCATACTTaGGAGGTCCCATGCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDGRRQRDCMQGSAFPSLAAQHT*EVPCAP Trigger: AGGAGCGCATGGGACCTCTCAAGTATGCTGAGCAGC...CAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTTTGGCGTCTCCCATCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR CCA 90 bp | GATGCAAGCATACTTCTGGCTCTCTTCCTCAGCTCTTCCCAAGCGCATGTGCTCACACTGTGGCTGGCTTaGGGTTCCGAGCATTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: DASILLALFLSSSQAHVLTLWLA*GSEHCT Trigger: CGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGT...GAGCACATGCGCTTGGGAAGAGCTGAGGAAGAGAGCCAGAAGTATGCTTGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACGCCAAAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTTGGATGCTAGCTCCATGTTCTTGTaGCTGAACACTGTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRRQRDCMQGSAFPSLDASSMFL*LNTVAG Trigger: GCCAGCCACAGTGTTCAGCCACAAGAACATGGAGCT...AGCATCCAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTTTGGCGTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CAA 72 bp | CGTGGTCACGAGAGGCTGCCCCATCAGGGTTTTCCCTaGCTCTCTAGTGGCATTGAGCCTCAGATATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RGHERLPHQGFP*LSSGIEPQIWT Trigger: TGTCCATATCTGAGGCTCAATGCCACTAGAGAGCAAGGGAAAACCCTGATGGGGCAGCCTCTCGTGACCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | CTCGGTCAGGAAGCTCTGGAGAGGAGGAAAACATGTTaGAAGCTGAAGCCCACCCATGTCCGACAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQEALERRKTC*KLKPTHVRQAL Trigger: GAGAGCCTGTCGGACATGGGTGGGCTTCAGCTTCAAACATGTTTTCCTCCTCTCCAGAGCTTCCTGACCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR GCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGACCAGAATCGGGATGTaGACACCAAAACAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YGFWGWTNSEPWTWACGLTRIGM*TPKQPS Trigger: ACTGGGCTGTTTTGGTGTGCACATCCCGATTCTGGT...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCTCGGCTTTGGCTTCTGGTGTATTATCTGAGCCACCGGGAGCTGCTCAGCACCAGAATCGGGATGTaGACACCAAAACAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRLWLLVYYLSHRELLSTRIGM*TPKQPS Trigger: ACTGGGCTGTTTTGGTGTGCACATCCCGATTCTGGT...GCTGAGCAGCTCCCGGTGGCTCAGATAATACACCAGAAGCCAAAGCCGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200224.5 |
||
| CDS-3UTR GCA 90 bp | ACAAATGGTGTCTTATTACTAATGATGCTGAGGCAGGGTTCTCAGGGGGCATCCGCAGGGTCAGGCTGGTaGGACAGCGAATCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNGVLLLMMLRQGSQGASAGSGW*DSESSP Trigger: GGGAGAGGATTCGCTGTCGCACCAGCCTGACCCTGC...GGATGCCCCCTGAGAACCCTGCCTCAGCATCATTAGTAATAAGACACCATTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGTGACTCATTCTCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGCAGGGTCAGGCTGGTaGGACAGCGAATCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSDSFSGLKLDLADVSPLAGSGW*DSESSP Trigger: GGGAGAGGATTCGCTGTCGCACCAGCCTGACCCTGC...CAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGAGAATGAGTCACTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATGGGAGACGCCAAAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTTGGCTGGAAAAGGTCAGTaGGATGTCCAGGGGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: KDGRRQRDCMQGSAFPSLAGKGQ*DVQGST Trigger: TGTCGACCCCTGGACATCGCACTGACCTTTTCCAGC...CAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTTTGGCGTCTCCCATCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR CCA 90 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCTTGAGCGAGGGGTACTaGGTGGAACCCTCCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSFGTAGLACSCIPTICLSEGY*VEPSRS Trigger: TGACCGGGAGGGTTCCACCCAGTACCCCTCGCTCAA...GCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | CCCTCAGCCTCTTCAGGTCTCTCGCCTTTCATGACCTaGTCACCTTTGGAGAGCTCTTCTTGGTGCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSASSGLSPFMT*SPLESSSWCSV Trigger: GACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGCGAGAGACCTGAAGAGGCTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| 3UTR CAA 72 bp | CAGCTCTGTGGCTGGGCAAAGTCAGACAGTCTGACCTaGGGGATAAGGTGTTTGGAGCTGGCTAATGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLCGWAKSDSLT*GIRCLELANEA Trigger: TGCCTCATTAGCCAGCTCCAAACACCTTATCCCCAAGGTCAGACTGTCTGACTTTGCCCAGCCACAGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAACACGAGAGTGTGGGGCTCATGCTCTCCTCATCTGTAGGGGCTGTGACACGTCTCCATACACATTaGGCTCCATGTTCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKHESVGLMLSSSVGAVTRLHTH*APCSCG Trigger: GCCACAAGAACATGGAGCTCAATGTGTATGGAGACG...TGTCACAGCCCCTACAGATGAGGAGAGCATGAGCCCCACACTCTCGTGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTATCTGCCTATTGCCAGGGGATTAGAAGACTTCTTAATTGTTACCTACAACCCACAGCCCCAGGATaGAGCCTCCGGGAGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVSAYCQGIRRLLNCYLQPTAPG*SLREGA Trigger: GGCACCCTCCCGGAGGCTTCATCCTGGGGCTGTGGG...TTGTAGGTAACAATTAAGAAGTCTTCTAATCCCCTGGCAATAGGCAGATACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR GCA 90 bp | CTCACCAGGGCGAGCTCTCCAGCACTGCTCTGGTTAGGCCACCCAGTGCTGCTACTGTTCAAACGCATCTaGAAGTTCTATGTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTRASSPALLWLGHPVLLLFKRI*KFYVGD Trigger: ATCACCAACATAGAACTTGCAGATGCGTTTGAACAG...TAGCAGCACTGGGTGGCCTAACCAGAGCAGTGCTGGAGAGCTCGCCCTGGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | CATTCCGTGGTGTTTCTCTCTTCTGTTGGTTGTTGTTaGTTGCCCAGGCTGACCTTCAACACCCCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSVVFLSSVGCC*LPRLTFNTPRA Trigger: AGCCCTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAACAACAACCAACAGAAGAGAGAAACACCACGGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | GGTGCATTCCGTGGTGTTTCTCTCTTCTGTTGGTTGTaGTTTGTTGCCCAGGCTGACCTTCAACACCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAFRGVSLFCWL*FVAQADLQHPQ Trigger: CTGGGGGTGTTGAAGGTCAGCCTGGGCAACAAACAACAACCAACAGAAGAGAGAAACACCACGGAATGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | CCGGGACTCCTACAGCTTTGGAACAGCAGGACTGGCTaGTTCATGCATCCCAACGATTTGCAGATGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLLQLWNSRTG*FMHPNDLQMVW Trigger: CCATACCATCTGCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGAGTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | CGGCTACTTGGACGACAGCGATCATGGGCCGTCTTTTaGCTGCCTGTGTTCATCCTTGTAGGTCTGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLLGRQRSWAVF*LPVFILVGLLC Trigger: ACAAAGCAGACCTACAAGGATGAACACAGGCAGCAAAAAGACGGCCCATGATCGCTGTCGTCCAAGTAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CAA 72 bp | CTTTACGAAGCTCTGTCTGCTTCCAGTCCAACCAGGTaGAATTCGGCCATTGCATCCACTCAAGGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYEALSASSPTR*NSAIASTQGSS Trigger: GGAGCTGCCTTGAGTGGATGCAATGGCCGAATTCAACCTGGTTGGACTGGAAGCAGACAGAGCTTCGTAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CAA 72 bp | CAAAGGGATTGCATGCAGGGCTCAGCTTTCCCATCCTaGGATGCTGGTGAGGAGCTTTACGAAGCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRDCMQGSAFPS*DAGEELYEALS Trigger: AGACAGAGCTTCGTAAAGCTCCTCACCAGCATCCAAGGATGGGAAAGCTGAGCCCTGCATGCAATCCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR TCA 90 bp | GTGCTCCATGTATGTCATCCAGTTTATGGGGCTGTCCTCAGGGACAGCATAGATCCATGTTCTTGTGGCTaGACACTGTGGCTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLHVCHPVYGAVLRDSIDPCSCG*TLWLAW Trigger: CCAAGCCAGCCACAGTGTTCAGCCACAAGAACATGG...ATCTATGCTGTCCCTGAGGACAGCCCCATAAACTGGATGACATACATGGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGTCTCTCGGCTTTGGCTTCTGGTGTATTATCTGAGCCACCGGGAGCTGCTAAACCATTCCCTCCATaGCCTCATAGCTTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLSALASGVLSEPPGAAKPFPP*PHSFCS Trigger: ACTACAGAAGCTATGAGGTCATGGAGGGAATGGTTT...AGCAGCTCCCGGTGGCTCAGATAATACACCAGAAGCCAAAGCCGAGAGACTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051510.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCGTATGTGCGTGTGTGCGTTACGGGTGGGAGGTTGTTTAATAGTTGGCTCACCAGAATCGGGATGTaGACACCAAAACAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WAYVRVCVTGGRLFNSWLTRIGM*TPKQPS Trigger: ACTGGGCTGTTTTGGTGTGCACATCCCGATTCTGGT...GAGCCAACTATTAAACAACCTCCCACCCGTAACGCACACACGCACATACGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTCATGACCTTGTCACCTTTGGAGAGCTCTTCTTGGTGCTCAGTCACTTTGGCTGGAAAAGGTCAGTaGGATGTCCAGGGGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PFMTLSPLESSSWCSVTLAGKGQ*DVQGST Trigger: TGTCGACCCCTGGACATCGCACTGACCTTTTCCAGC...CAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| 3UTR CAA 72 bp | CTTCACCCTTGTTCCTTCCAGGAAGATCTCCAACACTaGGCTGAGCACTGGCTGGTTCACCATGACAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHPCSFQEDLQH*AEHWLVHHDNC Trigger: GCAATTGTCATGGTGAACCAGCCAGTGCTCAGCCAAGTGTTGGAGATCTTCCTGGAAGGAACAAGGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCCGTCTCCATACACATTaGGCTCCATGTTCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SYSFGTAGLACSCIPTICRLHTH*APCSCG Trigger: GCCACAAGAACATGGAGCTCAATGTGTATGGAGACG...GCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR TCA 90 bp | CAATCTTTCACCTATGGATGGATGGATGGATGGATGGATGGGCAGACGGATGGACGTCTCCATACACATTaGGCTCCATGTTCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSFTYGWMDGWMDGQTDGRLHTH*APCSCG Trigger: GCCACAAGAACATGGAGCTCAATGTGTATGGAGACG...TCCATCCGTCTGCCCATCCATCCATCCATCCATCCATCCATAGGTGAAAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGCAGGGTCAGCTGACAGCACCCATGTCTCCAGAGTTAAGTGCTCTGTTTACCTATCCATAAGATaGACTCCAATCGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEAGSADSTHVSRVKCSVYLSIR*TPIAGS Trigger: TGACCCTGCGATTGGAGTTCATCTTATGGATAGGTA...AACAGAGCACTTAACTCTGGAGACATGGGTGCTGTCAGCTGACCCTGCCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTGAGGCAGGGTTCTCAGGGGGCATCCTGGGAACATGCGGATAAGGAAAAATACCTATCCATAAGATaGACTCCAATCGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLRQGSQGASWEHADKEKYLSIR*TPIAGS Trigger: TGACCCTGCGATTGGAGTTCATCTTATGGATAGGTA...TTTTTCCTTATCCGCATGTTCCCAGGATGCCCCCTGAGAACCCTGCCTCAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTTTTATTGATTCTGAGTTTCCCATCATGCACCCCAGTCCCACTCATCTCCGCTGCTCAGCATACTTaGGAGGTCCCATGCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KFLLILSFPSCTPVPLISAAQHT*EVPCAP Trigger: AGGAGCGCATGGGACCTCTCAAGTATGCTGAGCAGC...GGAGATGAGTGGGACTGGGGTGCATGATGGGAAACTCAGAATCAATAAAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTATCTGCCTATTGCCAGGGGATTAGAAGACTTCTTAATTGTTACCTACAAGCAGGGTCAGGCTGGTaGGACAGCGAATCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVSAYCQGIRRLLNCYLQAGSGW*DSESSP Trigger: GGGAGAGGATTCGCTGTCGCACCAGCCTGACCCTGC...TTGTAGGTAACAATTAAGAAGTCTTCTAATCCCCTGGCAATAGGCAGATACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR GCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGACTTGTGAATCCCACTaGAAACTGATCTTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YGFWGWTNSEPWTWACGLTCESH*KLIFSV Trigger: AACAGAGAAGATCAGTTTGCAGTGGGATTCACAAGT...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR CCA 90 bp | TATGGATTTTGGGGATGGACAAATTCAGAGCCCTGGACCTGGGCCTGCGGGCTGACACACAGAGACTTTTaGGACACACTTGAAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YGFWGWTNSEPWTWACGLTHRDF*DTLEKG Trigger: ACCTTTTTCAAGTGTGTCCCAAAAGTCTCTGTGTGT...CAGCCCGCAGGCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | TTCATGCATCCCAACGATTTGCAGATGGTATGGATTTaGGGGATGGACAAATTCAGAGCCCTGGACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FMHPNDLQMVWI*GMDKFRALDLG Trigger: GCCCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCTGCAAATCGTTGGGATGCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCATGCAGGGCTCAGCTTTCCCATCCTTGGATGCTGGTGAGGAGCTTTACGGGATACCTAGCCTCTTaGCGCTTCTATAAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IACRAQLSHPWMLVRSFTGYLAS*RFYKQK Trigger: TTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCC...CGTAAAGCTCCTCACCAGCATCCAAGGATGGGAAAGCTGAGCCCTGCATGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR TCA 90 bp | TCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTTACCTATCCATAAGATaGACTCCAATCGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLKLDLADVSPLVSCRCYLSIR*TPIAGS Trigger: TGACCCTGCGATTGGAGTTCATCTTATGGATAGGTA...ACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTCATGACCTTGTCACCTTTGGAGAGCTCTTCTTGGTGCTCAGTCACTTTGACCAGAATCGGGATGTaGACACCAAAACAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFMTLSPLESSSWCSVTLTRIGM*TPKQPS Trigger: ACTGGGCTGTTTTGGTGTGCACATCCCGATTCTGGT...CAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTTTTATTGATTCTGAGTTTCCCATCATGCACCCCAGTCCCACTCATCTCCGCTGGAAAAGGTCAGTaGGATGTCCAGGGGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: KFLLILSFPSCTPVPLISAGKGQ*DVQGST Trigger: TGTCGACCCCTGGACATCGCACTGACCTTTTCCAGC...GGAGATGAGTGGGACTGGGGTGCATGATGGGAAACTCAGAATCAATAAAAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR TCA 90 bp | GATGCAAGCATACTTCTGGCTCTCTTCCTCAGCTCTTCCCAAGCGCATGTGCTCGACCTGTCATATAAATaGGGATATTGCTTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DASILLALFLSSSQAHVLDLSYK*GYCFCR Trigger: ACGACAGAAGCAATATCCTCATTTATATGACAGGTC...GAGCACATGCGCTTGGGAAGAGCTGAGGAAGAGAGCCAGAAGTATGCTTGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTTTTATTGATTCTGAGTTTCCCATCATGCACCCCAGTCCCACTCATCTCCAGCTCCATGTTCTTGTaGCTGAACACTGTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLILSFPSCTPVPLISSSMFL*LNTVAG Trigger: GCCAGCCACAGTGTTCAGCCACAAGAACATGGAGCT...GGAGATGAGTGGGACTGGGGTGCATGATGGGAAACTCAGAATCAATAAAAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR TCA 90 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCGGATACCTAGCCTCTTaGCGCTTCTATAAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYSFGTAGLACSCIPTICGYLAS*RFYKQK Trigger: TTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCC...GCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| CDS-3UTR TCA 90 bp | AGAATTTCCCACACATCTGATATTTTCTTGTCATTAGCCTGGCGTCATTCTTCTGGAAAGAAGACGCTTTaGGCGAGGGGTACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RISHTSDIFLSLAWRHSSGKKTL*ARGTGW Trigger: CCACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCC...AGAAGAATGACGCCAGGCTAATGACAAGAAAATATCAGATGTGTGGGAAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCATGCAGGGCTCAGCTTTCCCATCCTTGGATGCTGGTGAGGAGCTTTACGCAAGTTCTATGTTGGTaGTTTCTTCAGAATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IACRAQLSHPWMLVRSFTQVLCW*FLQNLG Trigger: TCCAAGATTCTGAAGAAATCACCAACATAGAACTTG...CGTAAAGCTCCTCACCAGCATCCAAGGATGGGAAAGCTGAGCCCTGCATGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| CDS-3UTR CCA 90 bp | AATGCTAAAGATGGGAGACGCCAAAGGGATTGCATGCAGGGCTCAGCTTTCCCAACACACAGAGACTTTTaGGACACACTTGAAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NAKDGRRQRDCMQGSAFPTHRDF*DTLEKG Trigger: ACCTTTTTCAAGTGTGTCCCAAAAGTCTCTGTGTGT...TGGGAAAGCTGAGCCCTGCATGCAATCCCTTTGGCGTCTCCCATCTTTAGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
||
| 3UTR CAA 72 bp | CACTGCAAACTGATCTTCTCTGTTGTGATTTCCACCTaGCGCACACTTCCGAAGAAATCGGTGATCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HCKLIFSVVIST*RTLPKKSVIRT Trigger: TGTCCTGATCACCGATTTCTTCGGAAGTGTGCGCAAGGTGGAAATCACAACAGAGAAGATCAGTTTGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051510.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTGTCTCCAAGTTCTATGTTGGTaGTTTCTTCAGAATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQIRPCRCVSTGLLPMCLQVLCW*FLQNLG Trigger: TCCAAGATTCTGAAGAAATCACCAACATAGAACTTG...GAGACACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCGACCTGTCATATAAATaGGGATATTGCTTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SYSFGTAGLACSCIPTICDLSYK*GYCFCR Trigger: ACGACAGAAGCAATATCCTCATTTATATGACAGGTC...GCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
||
| 3UTR CAA 72 bp | GCCTTTCATGACCTTGTCACCTTTGGAGAGCTCTTCTaGGTGCTCAGTCACTTTGTAGAATTTCCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: AFHDLVTFGELF*VLSHFVEFPTH Trigger: ATGTGTGGGAAATTCTACAAAGTGACTGAGCACCAAGAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATTGTAGCGTCTCTTCTGCCACATCTGTTCAAACGCATCTGCAAGTTCTAGGATACCTAGCCTCTTaGCGCTTCTATAAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHCSVSSATSVQTHLQVLGYLAS*RFYKQK Trigger: TTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCC...TAGAACTTGCAGATGCGTTTGAACAGATGTGGCAGAAGAGACGCTACAATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200224.5 |
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| CDS-3UTR TCA 90 bp | GTGCTCCATGTATGTCATCCAGTTTATGGGGCTGTCCTCAGGGACAGCATAGATCAAGTTCTATGTTGGTaGTTTCTTCAGAATCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: VLHVCHPVYGAVLRDSIDQVLCW*FLQNLG Trigger: TCCAAGATTCTGAAGAAATCACCAACATAGAACTTG...ATCTATGCTGTCCCTGAGGACAGCCCCATAAACTGGATGACATACATGGAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| CDS-3UTR GCA 90 bp | ACAAATGGTGTCTTATTACTAATGATGCTGAGGCAGGGTTCTCAGGGGGCATCCACTTGTGAATCCCACTaGAAACTGATCTTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TNGVLLLMMLRQGSQGASTCESH*KLIFSV Trigger: AACAGAGAAGATCAGTTTGCAGTGGGATTCACAAGT...GGATGCCCCCTGAGAACCCTGCCTCAGCATCATTAGTAATAAGACACCATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| 3UTR CAA 72 bp | ACATCTTTCCTTGTAAATGTCCACTGCAATGAGTCATaGGTCTGGCTTGAGGTCTTTGGTTTCTGTGACATC | + |
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Preference number: 4 (lower is better) Translates to: TSFLVNVHCNES*VWLEVFGFCDI Trigger: GATGTCACAGAAACCAAAGACCTCAAGCCAGACCAATGACTCATTGCAGTGGACATTTACAAGGAAAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| CDS-3UTR CCA 90 bp | AAGAAAGAAAAGGCAGCAGTCCCAGAAGAACTGAAATTAACACCCACAGCAGTGACACACAGAGACTTTTaGGACACACTTGAAAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: KKEKAAVPEELKLTPTAVTHRDF*DTLEKG Trigger: ACCTTTTTCAAGTGTGTCCCAAAAGTCTCTGTGTGT...CACTGCTGTGGGTGTTAATTTCAGTTCTTCTGGGACTGCTGCCTTTTCTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| CDS-3UTR TCA 90 bp | CTCTTCTTGGTGCTCAGTCACTTTGTAGAATTTCCCACACATCTGATATTTTCTGGATACCTAGCCTCTTaGCGCTTCTATAAACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LFLVLSHFVEFPTHLIFSGYLAS*RFYKQK Trigger: TTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCC...AGAAAATATCAGATGTGTGGGAAATTCTACAAAGTGACTGAGCACCAAGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| 3UTR CAA 72 bp | TCACTTTGTAGAATTTCCCACACATCTGATATTTTCTaGTCATTAGCCTGGCGTCATTCTTCTGGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: SLCRISHTSDIF*SLAWRHSSGKM Trigger: CATCTTCCCAGAAGAATGACGCCAGGCTAATGACAAGAAAATATCAGATGTGTGGGAAATTCTACAAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS-3UTR TCA 90 bp | CTCTTCTTGGTGCTCAGTCACTTTGTAGAATTTCCCACACATCTGATATTTTCTGACCTGTCATATAAATaGGGATATTGCTTCTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LFLVLSHFVEFPTHLIFSDLSYK*GYCFCR Trigger: ACGACAGAAGCAATATCCTCATTTATATGACAGGTC...AGAAAATATCAGATGTGTGGGAAATTCTACAAAGTGACTGAGCACCAAGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| 3UTR CAA 72 bp | CAAAATGCACAGATTTATTTCCTTAAACTTGTCAGTTaGGGACTTAGACATTTCAGAAGGCTCCGAATGACC | + |
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Preference number: 4 (lower is better) Translates to: QNAQIYFLKLVS*GLRHFRRLRMT Trigger: GGTCATTCGGAGCCTTCTGAAATGTCTAAGTCCCAAACTGACAAGTTTAAGGAAATAAATCTGTGCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CAA 72 bp | GTGAATGGCAAAATGCACAGATTTATTTCCTTAAACTaGTCAGTTTGGGACTTAGACATTTCAGAAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VNGKMHRFISLN*SVWDLDISEGS Trigger: GGAGCCTTCTGAAATGTCTAAGTCCCAAACTGACAAGTTTAAGGAAATAAATCTGTGCATTTTGCCATTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| 3UTR CAA 72 bp | TTAAAACACACTTTCCCTCCCTGTCTAGAAGATGGCTaGAAACCTCTCAGCTCTTTTACTTTGTATCTTACT | + |
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Preference number: 4 (lower is better) Translates to: LKHTFPPCLEDG*KPLSSFTLYLT Trigger: AGTAAGATACAAAGTAAAAGAGCTGAGAGGTTTCAAGCCATCTTCTAGACAGGGAGGGAAAGTGTGTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| CDS-3UTR GCA 90 bp | GCACAGATTTATTTCCTTAAACTTGTCAGTTTGGGACTTAGACATTTCAGAAGGACTTGTGAATCCCACTaGAAACTGATCTTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: AQIYFLKLVSLGLRHFRRTCESH*KLIFSV Trigger: AACAGAGAAGATCAGTTTGCAGTGGGATTCACAAGT...CCTTCTGAAATGTCTAAGTCCCAAACTGACAAGTTTAAGGAAATAAATCTGTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGTTGGTCCTGTTCTGCACAGCCTTGGACAGCCACGTGGTCACGAGAGGCAACACTGTGGCTGGCTaGGGGTTCCGAGCATTGCAC | + |
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Preference number: 5 (lower is better) Translates to: EGLVLFCTALDSHVVTRGNTVAG*GFRALH Trigger: GTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTT...GCCTCTCGTGACCACGTGGCTGTCCAAGGCTGTGCAGAACAGGACCAACCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| CDS-3UTR CAA 90 bp | CAAGGGAGGCATCTCTGTGCCCCAGCCACCCCACAACAGCCAAGTGAAGGGTCACGGAAAGAAGACGCTTaGAGCGAGGGGTACTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGRHLCAPATPQQPSEGSRKEDA*SEGYWV Trigger: CACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCCG...TGACCCTTCACTTGGCTGTTGTGGGGTGGCTGGGGCACAGAGATGCCTCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| CDS-3UTR CAA 90 bp | AGGCAGGGTTCTCAGGGGGCATCCTGGGAACATGCGGATAAGGAAAAAGGCCCCCGGAAAGAAGACGCTTaGAGCGAGGGGTACTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQGSQGASWEHADKEKGPRKEDA*SEGYWV Trigger: CACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCCG...GGGGCCTTTTTCCTTATCCGCATGTTCCCAGGATGCCCCCTGAGAACCCTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| CDS-3UTR CAA 90 bp | GCCCTCAGCCTCTTCAGGTCTCTCGCCTTTCATGACCTTGTCACCTTTGGAGAGAACACTGTGGCTGGCTaGGGGTTCCGAGCATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALSLFRSLAFHDLVTFGENTVAG*GFRALH Trigger: GTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTT...CTCTCCAAAGGTGACAAGGTCATGAAAGGCGAGAGACCTGAAGAGGCTGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS CCA 90 bp | TCCACTTCCACATCGTCTCCATACACATTGAGCTCCATGTTCTTGTaGCTGAACACTGTGGCTGGCTTGGGGTTCCGAGCATTGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: STSTSSPYTLSSMFL*LNTVAGLGFRALHA Trigger: GGCGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTTCAGCCACAAGAACATGGAGCTCAATGTGTATGGAGACGATGTGGAAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS TCA 90 bp | ACAGCCCAGTTATTTGTGTGTCCACTTCTAAAGAACTGTTCGGCTTaGTCCTCGATGTGTCCAGCGGCAGAGCTGCCGAGAGACAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: TAQLFVCPLLKNCSA*SSMCPAAELPRDKS Trigger: GCTCTTGTCTCTCGGCAGCTCTGCCGCTGGACACATCGAGGATCAAGCCGAACAGTTCTTTAGAAGTGGACACACAAATAACTGGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 ENSMUST00000200224.5 |
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| CDS TCA 90 bp | CAAAAGCCAGAGCGGGTGTGGCAGGAGCGGACTCTGTCATATAAATaGGGATATTGCTTCTGTCGTCGGAAAGAAGACGCTTTGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QKPERVWQERTLSYK*GYCFCRRKEDALSE Trigger: CTCGCTCAAAGCGTCTTCTTTCCGACGACAGAAGCAATATCCTCATTTATATGACAGAGTCCGCTCCTGCCACACCCGCTCTGGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045029.15 |
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| CDS CCA 90 bp | TATTGCTTCTGTCGTCGGAAAGAAGACGCTTTGAGCGAGGGGTACTaGGTGGAACCCTCCCGGTCAATACCCTTAAAAAGTTCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: YCFCRRKEDALSEGY*VEPSRSIPLKSSPQ Trigger: CTGTGGAGAACTTTTTAAGGGTATTGACCGGGAGGGTTCCACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCCGACGACAGAAGCAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTCCCACACATCTGATATTTTCTTGTCATTAGCCTGGCGTCATTCTTCTAACACTGTGGCTGGCTaGGGGTTCCGAGCATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RISHTSDIFLSLAWRHSSNTVAG*GFRALH Trigger: GTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTT...AGAAGAATGACGCCAGGCTAATGACAAGAAAATATCAGATGTGTGGGAAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS-3UTR CAA 90 bp | CTTTCCCATCCTTGGATGCTGGTGAGGAGCTTTACGAAGCTCTGTCTGCTTCCAACTTTTGGGACACACTaGAAAAAGGTCGTTCATGTT | + |
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Preference number: 5 (lower is better) Translates to: LSHPWMLVRSFTKLCLLPTFGTH*KKVVHV Trigger: AACATGAACGACCTTTTTCAAGTGTGTCCCAAAAGT...TGGAAGCAGACAGAGCTTCGTAAAGCTCCTCACCAGCATCCAAGGATGGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161596.6 |
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| CDS-3UTR CAA 90 bp | TCAGGACTCAAATTAGACCTTGCCGATGTGTCTCCACTGGTCTCCTGCCGATGTACTTTTGGGACACACTaGAAAAAGGTCGTTCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGLKLDLADVSPLVSCRCTFGTH*KKVVHV Trigger: AACATGAACGACCTTTTTCAAGTGTGTCCCAAAAGT...ACATCGGCAGGAGACCAGTGGAGACACATCGGCAAGGTCTAATTTGAGTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162642.8 |
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| CDS TCA 90 bp | CAGCAAGCATCAGGACAATGTGACTGTCCGGGATACCTAGCCTCTTaGCGCTTCTATAAACAGAAAGAGTATTTGCAACATGTCGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: QQASGQCDCPGYLAS*RFYKQKEYLQHVGS Trigger: ACTACCGACATGTTGCAAATACTCTTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCCCGGACAGTCACATTGTCCTGATGCTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS TCA 90 bp | CAAGAAACCATTCCCTCCATGACCTGTCCGGGATACCTAGCCTCTTaGCGCTTCTATAAACAGAAAGAGTATTTGCAACATGTCGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: QETIPSMTCPGYLAS*RFYKQKEYLQHVGS Trigger: ACTACCGACATGTTGCAAATACTCTTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCCCGGACAGGTCATGGAGGGAATGGTTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200224.5 |
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| CDS-3UTR CAA 90 bp | TCCTACAGCTTTGGAACAGCAGGACTGGCTTGTTCATGCATCCCAACGATTTGCACTTTTGGGACACACTaGAAAAAGGTCGTTCATGTT | + |
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Preference number: 5 (lower is better) Translates to: SYSFGTAGLACSCIPTICTFGTH*KKVVHV Trigger: AACATGAACGACCTTTTTCAAGTGTGTCCCAAAAGT...GCAAATCGTTGGGATGCATGAACAAGCCAGTCCTGCTGTTCCAAAGCTGTAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159899.8 |
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| CDS TCA 90 bp | TCTTCTGCCACATCTGTTCAAACGCATCTGCAAGTTCTATGTTGGTaGTTTCTTCAGAATCTTGGAATTTCAAGAAACCATTCCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSATSVQTHLQVLCW*FLQNLGISRNHSLH Trigger: ATGGAGGGAATGGTTTCTTGAAATTCCAAGATTCTGAAGAAATCACCAACATAGAACTTGCAGATGCGTTTGAACAGATGTGGCAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS CAA 72 bp | AGCTCCATGTTCTTGTGGCTGAACACTGTGGCTGGCTaGGGGTTCCGAGCATTGCACGCCATGTCATCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSMFLWLNTVAG*GFRALHAMSSA Trigger: TGCTGATGACATGGCGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTTCAGCCACAAGAACATGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS CAA 90 bp | TACACATTGAGCTCCATGTTCTTGTGGCTGAACACTGTGGCTGGCTaGGGGTTCCGAGCATTGCACGCCATGTCATCAGCAAGCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YTLSSMFLWLNTVAG*GFRALHAMSSASIR Trigger: CCTGATGCTTGCTGATGACATGGCGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTTCAGCCACAAGAACATGGAGCTCAATGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS CCA 72 bp | TGTCGTCGGAAAGAAGACGCTTTGAGCGAGGGGTACTaGGTGGAACCCTCCCGGTCAATACCCTTAAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CRRKEDALSEGY*VEPSRSIPLKS Trigger: ACTTTTTAAGGGTATTGACCGGGAGGGTTCCACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCCGACGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS CAA 72 bp | TCCACATCGTCTCCATACACATTGAGCTCCATGTTCTaGTGGCTGAACACTGTGGCTGGCTTGGGGTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: STSSPYTLSSMF*WLNTVAGLGFR Trigger: TCGGAACCCCAAGCCAGCCACAGTGTTCAGCCACAAGAACATGGAGCTCAATGTGTATGGAGACGATGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS CAA 90 bp | AACAGCCCAGTTATTTGTGTGTCCACTTCTAAAGAACTGTTCGGCTaGATCCTCGATGTGTCCAGCGGCAGAGCTGCCGAGAGACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NSPVICVSTSKELFG*ILDVSSGRAAERQE Trigger: CTCTTGTCTCTCGGCAGCTCTGCCGCTGGACACATCGAGGATCAAGCCGAACAGTTCTTTAGAAGTGGACACACAAATAACTGGGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 ENSMUST00000200224.5 |
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| CDS TCA 72 bp | GAGCGGGTGTGGCAGGAGCGGACTCTGTCATATAAATaGGGATATTGCTTCTGTCGTCGGAAAGAAGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: ERVWQERTLSYK*GYCFCRRKEDA Trigger: AGCGTCTTCTTTCCGACGACAGAAGCAATATCCTCATTTATATGACAGAGTCCGCTCCTGCCACACCCGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045029.15 |
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| CDS CAA 72 bp | GTTATTTGTGTGTCCACTTCTAAAGAACTGTTCGGCTaGATCCTCGATGTGTCCAGCGGCAGAGCTGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VICVSTSKELFG*ILDVSSGRAAE Trigger: CTCGGCAGCTCTGCCGCTGGACACATCGAGGATCAAGCCGAACAGTTCTTTAGAAGTGGACACACAAATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 ENSMUST00000200224.5 |
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| CDS TCA 72 bp | TTATTTGTGTGTCCACTTCTAAAGAACTGTTCGGCTTaGTCCTCGATGTGTCCAGCGGCAGAGCTGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFVCPLLKNCSA*SSMCPAAELPR Trigger: TCTCGGCAGCTCTGCCGCTGGACACATCGAGGATCAAGCCGAACAGTTCTTTAGAAGTGGACACACAAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 ENSMUST00000200224.5 |
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| CDS CCA 72 bp | AAGGAGTTACTGAGTAAATCCTTCAAAAGTAGAATTTaGGAGTGTGCGGCAGAGAAGGGCAGATCTGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KELLSKSFKSRI*ECAAEKGRSAV Trigger: AACTGCAGATCTGCCCTTCTCTGCCGCACACTCCCAAATTCTACTTTTGAAGGATTTACTCAGTAACTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045029.15 |
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| CDS TCA 72 bp | TCAAGAAACCATTCCCTCCATGACCTGTCATATAAATaGGGATATTGCTTCTGTCGTCGGAAAGAAGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRNHSLHDLSYK*GYCFCRRKEDA Trigger: AGCGTCTTCTTTCCGACGACAGAAGCAATATCCTCATTTATATGACAGGTCATGGAGGGAATGGTTTCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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| CDS TCA 72 bp | TCAGAATCTTGGAATTTCAAGAAACCATTCCCTCCATaGCTCAAGGAGTTACTGAGTAAATCCTTCAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SESWNFKKPFPP*LKELLSKSFKS Trigger: ACTTTTGAAGGATTTACTCAGTAACTCCTTGAGTCATGGAGGGAATGGTTTCTTGAAATTCCAAGATTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045029.15 |
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| CDS TCA 72 bp | ACATCTGTTCAAACGCATCTGCAAGTTCTATGTTGGTaGTTTCTTCAGAATCTTGGAATTTCAAGAAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: TSVQTHLQVLCW*FLQNLGISRNH Trigger: ATGGTTTCTTGAAATTCCAAGATTCTGAAGAAATCACCAACATAGAACTTGCAGATGCGTTTGAACAGATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045029.15 ENSMUST00000159899.8 ENSMUST00000161596.6 ENSMUST00000162642.8 |
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