Pregenerated sensors for PIGH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021120Ensembl transcript IDs: ENSMUST00000072154.9, ENSMUST00000217998.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCATCACGAAGCCCAGGCTGGCCTCAAACTTTCAATCCTCCTGTTaGCAGCTTCTGAGAGCTGGGATTACAAGCATCCACACCATCCCT | + |
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Preference number: 1 (lower is better) Translates to: LITKPRLASNFQSSC*QLLRAGITSIHTIP Trigger: AGGGATGGTGTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAGTTTGAGGCCAGCCTGGGCTTCGTGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CCA 90 bp | TCTAGAGGAGACAGGTCTACCTCAAGTCACATTGCTATAGGCCCCTaGACAGCTCCTTCAAGGCTAGGTGAAGGGCAGAGAATGCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SRGDRSTSSHIAIGP*TAPSRLGEGQRMQF Trigger: GAACTGCATTCTCTGCCCTTCACCTAGCCTTGAAGGAGCTGTCCAGGGGCCTATAGCAATGTGACTTGAGGTAGACCTGTCTCCTCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR TCA 90 bp | GCTCTAAATGGCAGCCGTGAACTAAGAGACACAAGGTTGAGGGAATaGGTGCTCTGCCAGGAGGTCTCCAAATCCAGCCTTTGTATGTGG | + |
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Preference number: 1 (lower is better) Translates to: ALNGSRELRDTRLRE*VLCQEVSKSSLCMW Trigger: CCACATACAAAGGCTGGATTTGGAGACCTCCTGGCAGAGCACTCATTCCCTCAACCTTGTGTCTCTTAGTTCACGGCTGCCATTTAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR GCA 90 bp | GAGATCACCTGCTTCTGCCTCTTGAGTGCTGGGACTAAAGGCATGTaGCACTATGCCTGGCCGCCTTTTGACATGTCAAAATCCTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: EITCFCLLSAGTKGM*HYAWPPFDMSKSLR Trigger: CCTTAAGGATTTTGACATGTCAAAAGGCGGCCAGGCATAGTGGCACATGCCTTTAGTCCCAGCACTCAAGAGGCAGAAGCAGGTGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR TCA 90 bp | GGGTTAAAGGCGAGTTCTGCCCAGTCCAGCGCCTTTTCTCCTTCCTaGTCTTTAGCATCTAAGGAACCACCTCTGAAACAAAGGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: GLKASSAQSSAFSPS*SLASKEPPLKQRLL Trigger: CAGAAGCCTTTGTTTCAGAGGTGGTTCCTTAGATGCTAAAGATCAGGAAGGAGAAAAGGCGCTGGACTGGGCAGAACTCGCCTTTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CCA 90 bp | GCTCTGCCAGGAGGTCTCCAAATCCAGCCTTTGTATGTGGGTGTGTaGGGAATAAAGACAGGTTTTTATTTGATTTGGCTTTGGTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: ALPGGLQIQPLYVGV*GIKTGFYLIWLWFG Trigger: ACCAAACCAAAGCCAAATCAAATAAAAACCTGTCTTTATTCCCCACACACCCACATACAAAGGCTGGATTTGGAGACCTCCTGGCAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR CCA 90 bp | TTTGTCAATAAAACTGTCAGTGAACCAGACAATAACTGTGTGTTGTaGATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: FVNKTVSEPDNNCVL*IFILGFETVSHHEA Trigger: GGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATATCCACAACACACAGTTATTGTCTGGTTCACTGACAGTTTTATTGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CAA 90 bp | TCTCATCACGAAGCCCAGGCTGGCCTCAAACTTTCAATCCTCCTGTaGACAGCTTCTGAGAGCTGGGATTACAAGCATCCACACCATCCC | + |
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Preference number: 2 (lower is better) Translates to: SHHEAQAGLKLSILL*TASESWDYKHPHHP Trigger: GGGATGGTGTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAGTTTGAGGCCAGCCTGGGCTTCGTGATGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCCCTGCTTCTGCCTCTTaGGTGCTGGGACTAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLPASAS*VLGLKA Trigger: TGCCTTTAGTCCCAGCACTCAAGAGGCAGAAGCAGG...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGGGACTAAAGGCATGTaGCACTATGCCTGGCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: CGYLSWGLRQCLITKPRLGTKGM*HYAWPP Trigger: AGGCGGCCAGGCATAGTGGCACATGCCTTTAGTCCC...CAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATATCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTCAATCCTCCTGTTGACAGCTTCTGAGAGCTGGGATTACAAGCATCCACACACTCAGAGATCCGCCTaGCTCTGCCTCTGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LSILLLTASESWDYKHPHTQRSA*LCLCSA Trigger: AGCACTGCAGAGGCAGAGGCAGGCGGATCTCTGAGT...GTGTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCTCTGTGGTTCTGAGATCTACTCATCCATTCTGATTCCCAGGACTGTGTTTCAATCCTCCTGTTaGCAGCTTCTGAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLLCGSEIYSSILIPRTVFQSSC*QLLRAG Trigger: CCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAA...CACAGTCCTGGGAATCAGAATGGATGAGTAGATCTCAGAACCACAGAGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCTCTGTGGTTCTGAGATCTACTCATCCATTCTGATTCCCAGGACTGTGATGTGCCACTATGCCTaGCCGCCTTTTGACATGTCA | + |
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Preference number: 2 (lower is better) Translates to: PLLCGSEIYSSILIPRTVMCHYA*PPFDMS Trigger: TGACATGTCAAAAGGCGGCCAGGCATAGTGGCACAT...CACAGTCCTGGGAATCAGAATGGATGAGTAGATCTCAGAACCACAGAGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGCAGCTTTATAGCCATTTCTGTTTGAACCCCAACTCCCACCCCAGATTTTTTCAATCCTCCTGTTaGCAGCTTCTGAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ARQLYSHFCLNPNSHPRFFQSSC*QLLRAG Trigger: CCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAA...AAATCTGGGGTGGGAGTTGGGGTTCAAACAGAAATGGCTATAAAGCTGCCTGGC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGCAGCTTTATAGCCATTTCTGTTTGAACCCCAACTCCCACCCCAGATTTGATAGGGTTTCACTATaGAGACCTGGCTGTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ARQLYSHFCLNPNSHPRFDRVSL*RPGCPG Trigger: TCCAGGACAGCCAGGTCTGCATAGTGAAACCCTATC...AAATCTGGGGTGGGAGTTGGGGTTCAAACAGAAATGGCTATAAAGCTGCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR-3UTR GCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCTACCTCAAGTCACATTaGTATAGGCCCCTGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLYLKSH*YRPLDS Trigger: GCTGTCCAGGGGCCTATAGCAATGTGACTTGAGGTA...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAATCCTCCTGTTGACAGCTTCTGAGAGCTGGGATTACAAGCATCCACACATGTGCCACTATGCCTaGCCGCCTTTTGACATGTCA | + |
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Preference number: 2 (lower is better) Translates to: LSILLLTASESWDYKHPHMCHYA*PPFDMS Trigger: TGACATGTCAAAAGGCGGCCAGGCATAGTGGCACAT...GTGTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCTTCACTATGCAGACCTaGCTGTCCTGGAACTCACTA | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLFTMQT*LSWNSL Trigger: TAGTGAGTTCCAGGACAGCCAGGTCTGCATAGTGAA...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAATACAGAGTCAAGGAGAGTGTAAGAAGAATCCACCTGGCCCCTTAACCTCTACTCATCCATTCTaGTTCCCAGGACTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GEIQSQGECKKNPPGPLTSTHPF*FPGLCP Trigger: AGGACACAGTCCTGGGAATCAGAATGGATGAGTAGA...GGTTAAGGGGCCAGGTGGATTCTTCTTACACTCTCCTTGACTCTGTATTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCTCTGTGGTTCTGAGATCTACTCATCCATTCTGATTCCCAGGACTGTGGCCTTTTCTCCTTCCTaGTCTTTAGCATCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PLLCGSEIYSSILIPRTVAFSPS*SLASKE Trigger: TTCCTTAGATGCTAAAGATCAGGAAGGAGAAAAGGC...CACAGTCCTGGGAATCAGAATGGATGAGTAGATCTCAGAACCACAGAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCATTTATCTTGGGGTTTaGGACAGTGTCTCATCACGA | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLIYLGV*DSVSSR Trigger: TCGTGATGAGACACTGTCTCAAACCCCAAGATAAAT...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CAA 90 bp | GTTGAGGGAATGAGTGCTCTGCCAGGAGGTCTCCAAATCCAGCCTTaGTATGTGGGTGTGTGGGGAATAAAGACAGGTTTTTATTTGATT | + |
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Preference number: 2 (lower is better) Translates to: VEGMSALPGGLQIQP*YVGVWGIKTGFYLI Trigger: AATCAAATAAAAACCTGTCTTTATTCCCCACACACCCACATACAAAGGCTGGATTTGGAGACCTCCTGGCAGAGCACTCATTCCCTCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAATACAGAGTCAAGGAGAGTGTAAGAAGAATCCACCTGGCCCCTTAACCATTTATCTTGGGGTTTaGGACAGTGTCTCATCACGA | + |
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Preference number: 2 (lower is better) Translates to: GEIQSQGECKKNPPGPLTIYLGV*DSVSSR Trigger: TCGTGATGAGACACTGTCTCAAACCCCAAGATAAAT...GGTTAAGGGGCCAGGTGGATTCTTCTTACACTCTCCTTGACTCTGTATTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCTACTCAAATTGGTTGTaGGATATTGCCAGTACTCTG | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLYSNWL*DIASTL Trigger: CAGAGTACTGGCAATATCTCACAACCAATTTGAGTA...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGTGTTCTTTTTGGACAATACTTTTGGGTGGAGGATACTTACTATGTAGCGGGACTAAAGGCATGTaGCACTATGCCTGGCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: FQCSFWTILLGGGYLLCSGTKGM*HYAWPP Trigger: AGGCGGCCAGGCATAGTGGCACATGCCTTTAGTCCC...GCTACATAGTAAGTATCCTCCACCCAAAAGTATTGTCCAAAAAGAACACTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGATACTTACTATGTAGCTCAGAATGGCCTTAAACTCAAGAGATCACCTGCTTGCCTGGCCGCCTTTTaGCATGTCAAAATCCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: EDTYYVAQNGLKLKRSPACLAAF*HVKILK Trigger: CTTAAGGATTTTGACATGTCAAAAGGCGGCCAGGCA...AGCAGGTGATCTCTTGAGTTTAAGGCCATTCTGAGCTACATAGTAAGTATCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCCATAAGATATCACTGTaGAAACATAGATGGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLHKISL*KHRWTD Trigger: GTCTGTCCATCTATGTTTTCACAGTGATATCTTATG...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCCACCCATGGCTGAAATaGTATGTATGTTTGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLHPWLK*YVCLSI Trigger: TATTGACAAACATACATAGCATTTCAGCCATGGGTG...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTCAATCCTCCTGTTGACAGCTTCTGAGAGCTGGGATTACAAGCATCCACACAAAAAGAGCTTGACTTaGAAGCCAGGCAGCTTTATA | + |
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Preference number: 2 (lower is better) Translates to: LSILLLTASESWDYKHPHKKSLT*KPGSFI Trigger: TATAAAGCTGCCTGGCTTGCAAGTCAAGCTCTTTTT...GTGTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAATACAGAGTCAAGGAGAGTGTAAGAAGAATCCACCTGGCCCCTTAACCCACCCATGGCTGAAATaGTATGTATGTTTGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: GEIQSQGECKKNPPGPLTHPWLK*YVCLSI Trigger: TATTGACAAACATACATAGCATTTCAGCCATGGGTG...GGTTAAGGGGCCAGGTGGATTCTTCTTACACTCTCCTTGACTCTGTATTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGATACTTACTATGTAGCTCAGAATGGCCTTAAACTCAAGAGATCACCTGCTGTGAAGGGCAGAGAATaGAGTTCTTGGTTTACATCC | + |
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Preference number: 2 (lower is better) Translates to: EDTYYVAQNGLKLKRSPAVKGRE*SSWFTS Trigger: GGATGTAAACCAAGAACTGCATTCTCTGCCCTTCAC...AGCAGGTGATCTCTTGAGTTTAAGGCCATTCTGAGCTACATAGTAAGTATCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR-3UTR CCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCATGGTTTTTACAGTATaGAAAATAAACCGGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: IFILGFETVSHHEAQAGLMVFTV*KINRPL Trigger: TAGTGGCCGGTTTATTTTCCATACTGTAAAAACCAT...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGATACTTACTATGTAGCTCAGAATGGCCTTAAACTCAAGAGATCACCTGCTAAGGCTTCTGTCAACTaGCTTCCTCATCCTTTAATG | + |
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Preference number: 2 (lower is better) Translates to: EDTYYVAQNGLKLKRSPAKASVN*LPHPLM Trigger: CATTAAAGGATGAGGAAGCCAGTTGACAGAAGCCTT...AGCAGGTGATCTCTTGAGTTTAAGGCCATTCTGAGCTACATAGTAAGTATCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGAAATAAGCCTTTAACCCAACAATGTGTGTGTTGTACACCACAAGAAACTTCTACTCATCCATTCTaGTTCCCAGGACTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SRNKPLTQQCVCCTPQETSTHPF*FPGLCP Trigger: AGGACACAGTCCTGGGAATCAGAATGGATGAGTAGA...AGTTTCTTGTGGTGTACAACACACACATTGTTGGGTTAAAGGCTTATTTCTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGAAATGCTATGTATGTTTGTCAATAAAACTGTCAGTGAACCAGACAATAACTGCCTGGCCGCCTTTTaGCATGTCAAAATCCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: AEMLCMFVNKTVSEPDNNCLAAF*HVKILK Trigger: CTTAAGGATTTTGACATGTCAAAAGGCGGCCAGGCA...GTTATTGTCTGGTTCACTGACAGTTTTATTGACAAACATACATAGCATTTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CCA 90 bp | GACAATAACTGTGTGTTGTGGATATTTATCTTGGGGTTTGAGACAGTGTCTCATTTTCAGTGTTCTTTTTaGACAATACTTTTGGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: DNNCVLWIFILGFETVSHFQCSF*TILLGG Trigger: TCCACCCAAAAGTATTGTCCAAAAAGAACACTGAAA...ATGAGACACTGTCTCAAACCCCAAGATAAATATCCACAACACACAGTTATTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAATGCTATGTATGTTTGTCAATAAAACTGTCAGTGAACCAGACAATAACATGGTTTTTACAGTATaGAAAATAAACCGGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: AEMLCMFVNKTVSEPDNNMVFTV*KINRPL Trigger: TAGTGGCCGGTTTATTTTCCATACTGTAAAAACCAT...GTTATTGTCTGGTTCACTGACAGTTTTATTGACAAACATACATAGCATTTCAGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR GCA 72 bp | CTCTGCCTCTGCAGTGCTGGGGTTAAAGGCGAGTTCTaGCCAGTCCAGCGCCTTTTCTCCTTCCTGATCTTT | + |
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Preference number: 3 (lower is better) Translates to: LCLCSAGVKGEF*PVQRLFSFLIF Trigger: AAAGATCAGGAAGGAGAAAAGGCGCTGGACTGGGCAGAACTCGCCTTTAACCCCAGCACTGCAGAGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CCA 72 bp | GACAGGTCTACCTCAAGTCACATTGCTATAGGCCCCTaGACAGCTCCTTCAAGGCTAGGTGAAGGGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: DRSTSSHIAIGP*TAPSRLGEGQR Trigger: TCTCTGCCCTTCACCTAGCCTTGAAGGAGCTGTCCAGGGGCCTATAGCAATGTGACTTGAGGTAGACCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR TCA 72 bp | TGCTATAGGCCCCTGGACAGCTCCTTCAAGGCTAGGTaGAGGGCAGAGAATGCAGTTCTTGGTTTACATCCC | + |
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Preference number: 3 (lower is better) Translates to: CYRPLDSSFKAR*RAENAVLGLHP Trigger: GGGATGTAAACCAAGAACTGCATTCTCTGCCCTTCACCTAGCCTTGAAGGAGCTGTCCAGGGGCCTATAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR-3UTR CAA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCACCTGCTTCTGCCTCTaGAGTGCTGGGACTAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: IFILGFETVSHHEAQAGLTCFCL*SAGTKG Trigger: GCCTTTAGTCCCAGCACTCAAGAGGCAGAAGCAGGT...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR TCA 72 bp | AAGCCCAGGCTGGCCTCAAACTTTCAATCCTCCTGTTaGCAGCTTCTGAGAGCTGGGATTACAAGCATCCAC | + |
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Preference number: 3 (lower is better) Translates to: KPRLASNFQSSC*QLLRAGITSIH Trigger: GTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAGTTTGAGGCCAGCCTGGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR TCA 72 bp | GCGAGTTCTGCCCAGTCCAGCGCCTTTTCTCCTTCCTaGTCTTTAGCATCTAAGGAACCACCTCTGAAACAA | + |
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Preference number: 3 (lower is better) Translates to: ASSAQSSAFSPS*SLASKEPPLKQ Trigger: TTGTTTCAGAGGTGGTTCCTTAGATGCTAAAGATCAGGAAGGAGAAAAGGCGCTGGACTGGGCAGAACTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR TCA 72 bp | TGGCCTCAAACTTTCAATCCTCCTGTTGACAGCTTCTaGGAGCTGGGATTACAAGCATCCACACCATCCCTA | + |
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Preference number: 3 (lower is better) Translates to: WPQTFNPPVDSF*ELGLQASTPSL Trigger: TAGGGATGGTGTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAGTTTGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR TCA 72 bp | AACATGAATCAAGTTCCAGCCCCTCCTCTGTGGTTCTaGGATCTACTCATCCATTCTGATTCCCAGGACTGT | + |
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Preference number: 3 (lower is better) Translates to: NMNQVPAPPLWF*DLLIHSDSQDC Trigger: ACAGTCCTGGGAATCAGAATGGATGAGTAGATCTCAGAACCACAGAGGAGGGGCTGGAACTTGATTCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGTGTTCTTTTTGGACAATACTTTTGGGTGGAGGATACTTACTATGTAGCACCTGCTTCTGCCTCTaGAGTGCTGGGACTAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: FQCSFWTILLGGGYLLCSTCFCL*SAGTKG Trigger: GCCTTTAGTCCCAGCACTCAAGAGGCAGAAGCAGGT...GCTACATAGTAAGTATCCTCCACCCAAAAGTATTGTCCAAAAAGAACACTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR TCA 72 bp | AAGGCTTCTGTCAACTGGCTTCCTCATCCTTTAATGTaGCAGGCTCATGTCTGGGAACCAACATTTAATCTC | + |
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Preference number: 3 (lower is better) Translates to: KASVNWLPHPLM*QAHVWEPTFNL Trigger: GAGATTAAATGTTGGTTCCCAGACATGAGCCTGTCACATTAAAGGATGAGGAAGCCAGTTGACAGAAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CAA 90 bp | GACAATAACTGTGTGTTGTGGATATTTATCTTGGGGTTTGAGACAGTGTCTCATCTTTCAATCCTCCTGTaGACAGCTTCTGAGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: DNNCVLWIFILGFETVSHLSILL*TASESW Trigger: CCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAG...ATGAGACACTGTCTCAAACCCCAAGATAAATATCCACAACACACAGTTATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGATACTTACTATGTAGCTCAGAATGGCCTTAAACTCAAGAGATCACCTGCTTATTTATCTTGGGGTTaGAGACAGTGTCTCATCACG | + |
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Preference number: 3 (lower is better) Translates to: EDTYYVAQNGLKLKRSPAYLSWG*RQCLIT Trigger: CGTGATGAGACACTGTCTCAAACCCCAAGATAAATA...AGCAGGTGATCTCTTGAGTTTAAGGCCATTCTGAGCTACATAGTAAGTATCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGAAATGCTATGTATGTTTGTCAATAAAACTGTCAGTGAACCAGACAATAACCTTTCAATCCTCCTGTaGACAGCTTCTGAGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: AEMLCMFVNKTVSEPDNNLSILL*TASESW Trigger: CCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAG...GTTATTGTCTGGTTCACTGACAGTTTTATTGACAAACATACATAGCATTTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CCA 72 bp | AAAACTGTCAGTGAACCAGACAATAACTGTGTGTTGTaGATATTTATCTTGGGGTTTGAGACAGTGTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: KTVSEPDNNCVL*IFILGFETVSH Trigger: ATGAGACACTGTCTCAAACCCCAAGATAAATATCCACAACACACAGTTATTGTCTGGTTCACTGACAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGAAATGCTATGTATGTTTGTCAATAAAACTGTCAGTGAACCAGACAATAACTTGTGGATATTTATCTaGGGGTTTGAGACAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: AEMLCMFVNKTVSEPDNNLWIFI*GFETVS Trigger: AGACACTGTCTCAAACCCCAAGATAAATATCCACAA...GTTATTGTCTGGTTCACTGACAGTTTTATTGACAAACATACATAGCATTTCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAATCCTCCTGTTGACAGCTTCTGAGAGCTGGGATTACAAGCATCCACACTATTCTCGCACAGGGTaGAGAGCCCGTAGGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSILLLTASESWDYKHPHYSRTG*RARRPP Trigger: TGGCGGCCTACGGGCTCTTCACCCTGTGCGAGAATA...GTGTGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| CDS-3UTR CCA 90 bp | ATTTGGGGTTCTAGAGGAGACAGGTCTACCTCAAGTCACATTGCTATAGGCCCCAGTCCAACCGGGGCTTaGCACTCTGGAAGACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: IWGSRGDRSTSSHIAIGPSPTGA*HSGRQE Trigger: TTCCTGTCTTCCAGAGTGCCAAGCCCCGGTTGGACT...GGGGCCTATAGCAATGTGACTTGAGGTAGACCTGTCTCCTCTAGAACCCCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| CDS-3UTR CCA 90 bp | CCCCAGATTTGGGGTTCTAGAGGAGACAGGTCTACCTCAAGTCACATTGCTATACGGGGCTTGGCACTCTaGAAGACAGGAACTACTCGA | + |
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Preference number: 4 (lower is better) Translates to: PQIWGSRGDRSTSSHIAIRGLAL*KTGTTR Trigger: TCGAGTAGTTCCTGTCTTCCAGAGTGCCAAGCCCCG...TATAGCAATGTGACTTGAGGTAGACCTGTCTCCTCTAGAACCCCAAATCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| 3UTR CAA 72 bp | GAAGCCCAGGCTGGCCTCAAACTTTCAATCCTCCTGTaGACAGCTTCTGAGAGCTGGGATTACAAGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: EAQAGLKLSILL*TASESWDYKHP Trigger: TGGATGCTTGTAATCCCAGCTCTCAGAAGCTGTCAACAGGAGGATTGAAAGTTTGAGGCCAGCCTGGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| CDS-3UTR TCA 90 bp | ATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCCTCGCCCGATGCATAAGATaGAGTCATCTGGATGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: IFILGFETVSHHEAQAGLARCIR*SHLDAK Trigger: CTTGGCATCCAGATGACTTCATCTTATGCATCGGGC...GAGGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CAA 72 bp | ATGAGTGCTCTGCCAGGAGGTCTCCAAATCCAGCCTTaGTATGTGGGTGTGTGGGGAATAAAGACAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: MSALPGGLQIQP*YVGVWGIKTGF Trigger: AAAACCTGTCTTTATTCCCCACACACCCACATACAAAGGCTGGATTTGGAGACCTCCTGGCAGAGCACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217998.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGCAGCTTTATAGCCATTTCTGTTTGAACCCCAACTCCCACCCCAGATTTCCTTGTCCATCTCTATaGAGGTGGTACTTTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: ARQLYSHFCLNPNSHPRFPCPSL*RWYFLC Trigger: GCAAAGAAAGTACCACCTTCATAGAGATGGACAAGG...AAATCTGGGGTGGGAGTTGGGGTTCAAACAGAAATGGCTATAAAGCTGCCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| CDS-3UTR TCA 90 bp | TTTCAGTGTTCTTTTTGGACAATACTTTTGGGTGGAGGATACTTACTATGTAGCTATTCTCGCACAGGGTaGAGAGCCCGTAGGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: FQCSFWTILLGGGYLLCSYSRTG*RARRPP Trigger: TGGCGGCCTACGGGCTCTTCACCCTGTGCGAGAATA...GCTACATAGTAAGTATCCTCCACCCAAAAGTATTGTCCAAAAAGAACACTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| 3UTR CAA 72 bp | ACAATAACTGTGTGTTGTGGATATTTATCTTGGGGTTaGAGACAGTGTCTCATCACGAAGCCCAGGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TITVCCGYLSWG*RQCLITKPRLA Trigger: GGCCAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATATCCACAACACACAGTTATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| CDS-3UTR TCA 90 bp | GCTGAAATGCTATGTATGTTTGTCAATAAAACTGTCAGTGAACCAGACAATAACGCCCGATGCATAAGATaGAGTCATCTGGATGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: AEMLCMFVNKTVSEPDNNARCIR*SHLDAK Trigger: CTTGGCATCCAGATGACTTCATCTTATGCATCGGGC...GTTATTGTCTGGTTCACTGACAGTTTTATTGACAAACATACATAGCATTTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGTGTTCTTTTTGGACAATACTTTTGGGTGGAGGATACTTACTATGTAGCCAGTCCAACCGGGGCTaGGCACTCTGGAAGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: FQCSFWTILLGGGYLLCSQSNRG*ALWKTG Trigger: TCCTGTCTTCCAGAGTGCCAAGCCCCGGTTGGACTG...GCTACATAGTAAGTATCCTCCACCCAAAAGTATTGTCCAAAAAGAACACTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072154.9 |
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| CDS-3UTR CAA 90 bp | CCCCTCCTCTGTGGTTCTGAGATCTACTCATCCATTCTGATTCCCAGGACTGTGTTAATGATAATGTCCTaGACCTTGTCCATCTCTATG | + |
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Preference number: 5 (lower is better) Translates to: PLLCGSEIYSSILIPRTVLMIMS*TLSISM Trigger: CATAGAGATGGACAAGGTCAAGGACATTATCATTAA...CACAGTCCTGGGAATCAGAATGGATGAGTAGATCTCAGAACCACAGAGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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| CDS-3UTR CAA 90 bp | TGTGGATATTTATCTTGGGGTTTGAGACAGTGTCTCATCACGAAGCCCAGGCTGTTAATGATAATGTCCTaGACCTTGTCCATCTCTATG | + |
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Preference number: 5 (lower is better) Translates to: CGYLSWGLRQCLITKPRLLMIMS*TLSISM Trigger: CATAGAGATGGACAAGGTCAAGGACATTATCATTAA...CAGCCTGGGCTTCGTGATGAGACACTGTCTCAAACCCCAAGATAAATATCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072154.9 ENSMUST00000217998.2 |
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