Pregenerated sensors for PIGC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026698Ensembl transcript IDs: ENSMUST00000028021.7, ENSMUST00000111594.3, ENSMUST00000193784.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCAGCTGGTAAAGGCCTGTTGCCAGGGCCTGAATTTGATGCGTaGGACATACATACTGGAAATAGACAAACCCCCTCTCTTATACAC | + |
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Preference number: 1 (lower is better) Translates to: GSAGKGLLPGPEFDA*DIHTGNRQTPSLIH Trigger: GTGTATAAGAGAGGGGGTTTGTCTATTTCCAGTATGTATGTCCCACGCATCAAATTCAGGCCCTGGCAACAGGCCTTTACCAGCTGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR TCA 90 bp | AAGGACAAGCACCCTCCCCTAAGCCCTTGGTTAAATGCTTTCTTCTaGTCTCAGCTCTACCATCTAGATCAGTCGGCTGCTTCAAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: KDKHPPLSPWLNAFF*SQLYHLDQSAASRV Trigger: CACTCTTGAAGCAGCCGACTGATCTAGATGGTAGAGCTGAGATCAGAAGAAAGCATTTAACCAAGGGCTTAGGGGAGGGTGCTTGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 90 bp | TCGTGCCAATTTGGAGACACAATGTGTACAATCCATCACAGGCAATaGCTGGATGCTTTGGGCTCCATGGGGCAGTTCTTTGTCTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: SCQFGDTMCTIHHRQ*LDALGSMGQFFVFS Trigger: GGAAAAGACAAAGAACTGCCCCATGGAGCCCAAAGCATCCAGGCATTGCCTGTGATGGATTGTACACATTGTGTCTCCAAATTGGCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 90 bp | AAATGCTTTCTTCTGATCTCAGCTCTACCATCTAGATCAGTCGGCTaGTTCAAGAGTGGACCCCTGCCTTTAAATGTTGCACCGGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: KCFLLISALPSRSVG*FKSGPLPLNVAPVR Trigger: CCTAACCGGTGCAACATTTAAAGGCAGGGGTCCACTCTTGAAGCAGCCGACTGATCTAGATGGTAGAGCTGAGATCAGAAGAAAGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 90 bp | AAAATAACTGAAGGACAAGCACCCTCCCCTAAGCCCTTGGTTAAATaGTTTCTTCTGATCTCAGCTCTACCATCTAGATCAGTCGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: KITEGQAPSPKPLVK*FLLISALPSRSVGC Trigger: GCAGCCGACTGATCTAGATGGTAGAGCTGAGATCAGAAGAAAGCATTTAACCAAGGGCTTAGGGGAGGGTGCTTGTCCTTCAGTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 90 bp | AGCAGATCCTGGAGCATTTCAGATTTCAGAATTTTGCATTTGAGGTaGTCAGCACTAACATCGAGCTTCGGGTTGGGCTCTCTTCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: SRSWSISDFRILHLR*SALTSSFGLGSLQD Trigger: GTCTTGAAGAGAGCCCAACCCGAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCTGAAATCTGAAATGCTCCAGGATCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CCA 90 bp | AACAAGCAGAGGGCAAGTACCACTTGCACAGATGGAAGCAGCCACTaGAGAAAGTACCTCATTCATTTTGTGCCTTTGCCCTCTTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: NKQRASTTCTDGSSH*RKYLIHFVPLPSSN Trigger: ATTTGAAGAGGGCAAAGGCACAAAATGAATGAGGTACTTTCTCCAGTGGCTGCTTCCATCTGTGCAAGTGGTACTTGCCCTCTGCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 90 bp | CTCTCCTTGAGTGACCACTTCTGTGGTATTGGACAACAAACTGGATaGCACCATCAGGGATTCTCAAATTTGGGCTCTAGATATATAAAG | + |
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Preference number: 1 (lower is better) Translates to: LSLSDHFCGIGQQTG*HHQGFSNLGSRYIK Trigger: CTTTATATATCTAGAGCCCAAATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGGTCACTCAAGGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR TCA 90 bp | CATATTACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTaGGCCACAGGTATGACTCCCAAACTGAGTAGAAACAACACTTTT | + |
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Preference number: 1 (lower is better) Translates to: HITNQNHSYCNIYFL*ATGMTPKLSRNNTF Trigger: AAAAGTGTTGTTTCTACTCAGTTTGGGAGTCATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTAATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGACTCAAGCTCCCACTCTTTCGTTCCTCCCCCAGATCTCTGTGACTAAACCTAACTGCCTGAGATaGACTCACCCTCCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SVTQAPTLSFLPQISVTKPNCLR*THPPAS Trigger: AGAGGCTGGAGGGTGAGTTCATCTCAGGCAGTTAGG...TTTAGTCACAGAGATCTGGGGGAGGAACGAAAGAGTGGGAGCTTGAGTCACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCATCACAGGCAATGCCTGGATGCTTTGGGCTCCATGGGGCAGTTCTTTGTCTCCCCCAGATCTCTGTaGCTAAATCCCATCACGTTC | + |
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Preference number: 2 (lower is better) Translates to: IHHRQCLDALGSMGQFFVSPRSL*LNPITF Trigger: GAACGTGATGGGATTTAGTCACAGAGATCTGGGGGA...GACAAAGAACTGCCCCATGGAGCCCAAAGCATCCAGGCATTGCCTGTGATGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CAA 90 bp | AGTGTGATGGCTCAGCTGGTAAAGGCCTGTTGCCAGGGCCTGAATTaGATGCGTGGGACATACATACTGGAAATAGACAAACCCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SVMAQLVKACCQGLN*MRGTYILEIDKPPL Trigger: GAGAGGGGGTTTGTCTATTTCCAGTATGTATGTCCCACGCATCAAATTCAGGCCCTGGCAACAGGCCTTTACCAGCTGAGCCATCACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAATTTTGCATTTGAGGTGCTCAGCACTAACATCGAGCTTCGGGTTGGGCTCGGTTTCCTAACTGCCTaGGATGAACTCACCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QNFAFEVLSTNIELRVGLGFLTA*DELTLQ Trigger: CTGGAGGGTGAGTTCATCTCAGGCAGTTAGGAAACC...GAGCCCAACCCGAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAATTTTGCATTTGAGGTGCTCAGCACTAACATCGAGCTTCGGGTTGGGCTCCAGAGCCGAACTCAGTaGCTCAAGCTCCCACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QNFAFEVLSTNIELRVGLQSRTQ*LKLPLF Trigger: AAAGAGTGGGAGCTTGAGTCACTGAGTTCGGCTCTG...GAGCCCAACCCGAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR GCA 90 bp | CCACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAACTGGTAAAGGCCTGTTaGCAGGGCCTGAATTTGATG | + |
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Preference number: 2 (lower is better) Translates to: PLLWYWTTNWMPPSGILKLVKAC*QGLNLM Trigger: CATCAAATTCAGGCCCTGGCAACAGGCCTTTACCAG...TTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATCAGTCACAAAATAACTaGAGGACAAGCACCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: HFCGIGQQTGCHHQGFSNQSQNN*RTSTLP Trigger: GGGGAGGGTGCTTGTCCTTCAGTTATTTTGTGACTG...ATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGCCCTCTTCAAATTTAACCTACATTCCAACTGTTATGACACCTCCAATGAACAGCTGCCCTCACTaGGCACACTTGCTTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PLPSSNLTYIPTVMTPPMNSCPH*AHLLGP Trigger: TGGACCAAGCAAGTGTGCCCAGTGAGGGCAGCTGTT...CATTGGAGGTGTCATAACAGTTGGAATGTAGGTTAAATTTGAAGAGGGCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CAA 90 bp | AGAATTTTGCATTTGAGGTGCTCAGCACTAACATCGAGCTTCGGGTaGGGCTCTCTTCAAGACGCTTCACACAGCTTATCTATTGCAACA | + |
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Preference number: 2 (lower is better) Translates to: RILHLRCSALTSSFG*GSLQDASHSLSIAT Trigger: TGTTGCAATAGATAAGCTGTGTGAAGCGTCTTGAAGAGAGCCCAACCCGAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CAA 90 bp | TTTCAGAGCAGATCCTGGAGCATTTCAGATTTCAGAATTTTGCATTaGAGGTGCTCAGCACTAACATCGAGCTTCGGGTTGGGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: FQSRSWSISDFRILH*RCSALTSSFGLGSL Trigger: AAGAGAGCCCAACCCGAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCTGAAATCTGAAATGCTCCAGGATCTGCTCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CAA 90 bp | AAAACCTTTCAGAGCAGATCCTGGAGCATTTCAGATTTCAGAATTTaGCATTTGAGGTGCTCAGCACTAACATCGAGCTTCGGGTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: KTFQSRSWSISDFRI*HLRCSALTSSFGLG Trigger: GCCCAACCCGAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCTGAAATCTGAAATGCTCCAGGATCTGCTCTGAAAGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAATTTTGCATTTGAGGTGCTCAGCACTAACATCGAGCTTCGGGTTGGGCTCAAGCCCTTGGTTAAATaGTTTCTTCTGATCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QNFAFEVLSTNIELRVGLKPLVK*FLLISA Trigger: AGCTGAGATCAGAAGAAAGCATTTAACCAAGGGCTT...GAGCCCAACCCGAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CAA 90 bp | TTCAGTCACAAAATAACTGAAGGACAAGCACCCTCCCCTAAGCCCTaGGTTAAATGCTTTCTTCTGATCTCAGCTCTACCATCTAGATCA | + |
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Preference number: 2 (lower is better) Translates to: FSHKITEGQAPSPKP*VKCFLLISALPSRS Trigger: TGATCTAGATGGTAGAGCTGAGATCAGAAGAAAGCATTTAACCAAGGGCTTAGGGGAGGGTGCTTGTCCTTCAGTTATTTTGTGACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | TACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTGAGCCACAGGTATGGTTTCCTAACTGCCTaGGATGAACTCACCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: YESESQLLQYLLSLSHRYGFLTA*DELTLQ Trigger: CTGGAGGGTGAGTTCATCTCAGGCAGTTAGGAAACC...ATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTATACTACTACCCGCTTGTTAGTTCTAATTTGAGACTACTTACAACAAGCCAGAGCCGAACTCAGTaGCTCAAGCTCCCACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: MLYYYPLVSSNLRLLTTSQSRTQ*LKLPLF Trigger: AAAGAGTGGGAGCTTGAGTCACTGAGTTCGGCTCTG...GCTTGTTGTAAGTAGTCTCAAATTAGAACTAACAAGCGGGTAGTAGTATAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | TACACAGAAAAGGCTAAACAACTGATTACACTTTTACACACACACACACACCTTCAGTCACAAAATAACTaGAGGACAAGCACCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: YTEKAKQLITLLHTHTHLQSQNN*RTSTLP Trigger: GGGGAGGGTGCTTGTCCTTCAGTTATTTTGTGACTG...AAGGTGTGTGTGTGTGTGTAAAAGTGTAATCAGTTGTTTAGCCTTTTCTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAATTTAACCTACATTCCAACTGTTATGACACCTCCAATGTCCCTTATCTCCCCCAGATCTCTGTaGCTAAATCCCATCACGTTC | + |
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Preference number: 2 (lower is better) Translates to: SSNLTYIPTVMTPPMSLISPRSL*LNPITF Trigger: GAACGTGATGGGATTTAGTCACAGAGATCTGGGGGA...GATAAGGGACATTGGAGGTGTCATAACAGTTGGAATGTAGGTTAAATTTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR GCA 90 bp | TACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTGAGCCACAGGTATCTGGTAAAGGCCTGTTaGCAGGGCCTGAATTTGATG | + |
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Preference number: 2 (lower is better) Translates to: YESESQLLQYLLSLSHRYLVKAC*QGLNLM Trigger: CATCAAATTCAGGCCCTGGCAACAGGCCTTTACCAG...ATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGCCCTCTTCAAATTTAACCTACATTCCAACTGTTATGACACCTCCAATGCCACTTCTGTGGTATTaGACAACAAACTGGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: PLPSSNLTYIPTVMTPPMPLLWY*TTNWMP Trigger: TGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGG...CATTGGAGGTGTCATAACAGTTGGAATGTAGGTTAAATTTGAAGAGGGCAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATTTGAAGCCCTTGGTTAAATaGTTTCTTCTGATCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: FCGIGQQTGCHHQGFSNLKPLVK*FLLISA Trigger: AGCTGAGATCAGAAGAAAGCATTTAACCAAGGGCTT...CAAATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATTTAAGCCCTTGGTTAAATaGTTTCTTCTGATCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLWYWTTNWMPPSGILKFKPLVK*FLLISA Trigger: AGCTGAGATCAGAAGAAAGCATTTAACCAAGGGCTT...AAATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CAA 90 bp | GGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATTaGGGCTCTAGATATATAAAGGTGTCCCTTAGTATACACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GIGQQTGCHHQGFSN*GSRYIKVSLSIHRK Trigger: TTTTCTGTGTATACTAAGGGACACCTTTATATATCTAGAGCCCAAATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCAGACTTCACAATTTGTCCCATCTTTAGACAAGATGGATTGCTCATCACCAACGTTTTGTTTCTATaGCATGTAGCTCTCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: IPDFTICPIFRQDGLLITNVLFL*HVALLE Trigger: CTCAAGGAGAGCTACATGCCATAGAAACAAAACGTT...GGTGATGAGCAATCCATCTTGTCTAAAGATGGGACAAATTGTGAAGTCTGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAATTTAACCTACATTCCAACTGTTATGACACCTCCAATGTCCCTTATCATTAAATGTCACCTCTaGTTTCCTAACTGCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSNLTYIPTVMTPPMSLIIKCHL*FPNCLR Trigger: TCTCAGGCAGTTAGGAAACCAGAGGTGACATTTAAT...GATAAGGGACATTGGAGGTGTCATAACAGTTGGAATGTAGGTTAAATTTGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTATACTACTACCCGCTTGTTAGTTCTAATTTGAGACTACTTACAACAAGCATTAAATGTCACCTCTaGTTTCCTAACTGCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: MLYYYPLVSSNLRLLTTSIKCHL*FPNCLR Trigger: TCTCAGGCAGTTAGGAAACCAGAGGTGACATTTAAT...GCTTGTTGTAAGTAGTCTCAAATTAGAACTAACAAGCGGGTAGTAGTATAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | TACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTGAGCCACAGGTATTTAAATGCTTTCTTCTaGTCTCAGCTCTACCATCTA | + |
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Preference number: 2 (lower is better) Translates to: YESESQLLQYLLSLSHRYLNAFF*SQLYHL Trigger: TAGATGGTAGAGCTGAGATCAGAAGAAAGCATTTAA...ATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGATTACACTTTTACACACACACACACACCTTCATACTACTTTTGTCTTATGTTAAATGCTTTCTTCTaGTCTCAGCTCTACCATCTA | + |
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Preference number: 2 (lower is better) Translates to: TDYTFTHTHTPSYYFCLMLNAFF*SQLYHL Trigger: TAGATGGTAGAGCTGAGATCAGAAGAAAGCATTTAA...CATAAGACAAAAGTAGTATGAAGGTGTGTGTGTGTGTGTAAAAGTGTAATCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR TCA 72 bp | AGGGTCCAATTACTTGATCAACAGAGCCGAACTCAGTaGCTCAAGCTCCCACTCTTTCGTTCCTCCCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RVQLLDQQSRTQ*LKLPLFRSSPR Trigger: TCTGGGGGAGGAACGAAAGAGTGGGAGCTTGAGTCACTGAGTTCGGCTCTGTTGATCAAGTAATTGGACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 72 bp | GAGACTACTTACAACAAGCAGAGGGCAAGTACCACTTaGACAGATGGAAGCAGCCACTGGAGAAAGTACCTC | + |
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Preference number: 3 (lower is better) Translates to: ETTYNKQRASTT*TDGSSHWRKYL Trigger: GAGGTACTTTCTCCAGTGGCTGCTTCCATCTGTGCAAGTGGTACTTGCCCTCTGCTTGTTGTAAGTAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR CCA 72 bp | GAGACACAATGTGTACAATCCATCACAGGCAATGCCTaGATGCTTTGGGCTCCATGGGGCAGTTCTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ETQCVQSITGNA*MLWAPWGSSLS Trigger: AGACAAAGAACTGCCCCATGGAGCCCAAAGCATCCAGGCATTGCCTGTGATGGATTGTACACATTGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 72 bp | CTTCTGATCTCAGCTCTACCATCTAGATCAGTCGGCTaGTTCAAGAGTGGACCCCTGCCTTTAAATGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: LLISALPSRSVG*FKSGPLPLNVA Trigger: TGCAACATTTAAAGGCAGGGGTCCACTCTTGAAGCAGCCGACTGATCTAGATGGTAGAGCTGAGATCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR GCA 72 bp | CACAATGTGTACAATCCATCACAGGCAATGCCTGGATaGTTTGGGCTCCATGGGGCAGTTCTTTGTCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: HNVYNPSQAMPG*FGLHGAVLCLF Trigger: GAAAAGACAAAGAACTGCCCCATGGAGCCCAAAGCATCCAGGCATTGCCTGTGATGGATTGTACACATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR CAA 90 bp | ACCACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAATGCCAGGGCCTGAATTaGATGCGTGGGACATACATA | + |
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Preference number: 3 (lower is better) Translates to: TTSVVLDNKLDATIRDSQCQGLN*MRGTYI Trigger: TATGTATGTCCCACGCATCAAATTCAGGCCCTGGCA...TTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCATCACAGGCAATGCCTGGATGCTTTGGGCTCCATGGGGCAGTTCTTTGTCTTCAGAATTTTGCATTaGAGGTGCTCAGCACTAACA | + |
|
Preference number: 3 (lower is better) Translates to: IHHRQCLDALGSMGQFFVFRILH*RCSALT Trigger: TGTTAGTGCTGAGCACCTCAAATGCAAAATTCTGAA...GACAAAGAACTGCCCCATGGAGCCCAAAGCATCCAGGCATTGCCTGTGATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCATCACAGGCAATGCCTGGATGCTTTGGGCTCCATGGGGCAGTTCTTTGTCTCAGATTTCAGAATTTaGCATTTGAGGTGCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IHHRQCLDALGSMGQFFVSDFRI*HLRCSA Trigger: TGCTGAGCACCTCAAATGCAAAATTCTGAAATCTGA...GACAAAGAACTGCCCCATGGAGCCCAAAGCATCCAGGCATTGCCTGTGATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR GCA 72 bp | GAAGGACAAGCACCCTCCCCTAAGCCCTTGGTTAAATaGTTTCTTCTGATCTCAGCTCTACCATCTAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: EGQAPSPKPLVK*FLLISALPSRS Trigger: TGATCTAGATGGTAGAGCTGAGATCAGAAGAAAGCATTTAACCAAGGGCTTAGGGGAGGGTGCTTGTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATTCCCTCCCCTAAGCCCTaGGTTAAATGCTTTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSVVLDNKLDATIRDSQIPSPKP*VKCFLL Trigger: CAGAAGAAAGCATTTAACCAAGGGCTTAGGGGAGGG...AATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR TCA 72 bp | AGTAAATTAAATGTCACCTCTGGTTTCCTAACTGCCTaGGATGAACTCACCCTCCAGCCTCTTTCATATCGC | + |
|
Preference number: 3 (lower is better) Translates to: SKLNVTSGFLTA*DELTLQPLSYR Trigger: GCGATATGAAAGAGGCTGGAGGGTGAGTTCATCTCAGGCAGTTAGGAAACCAGAGGTGACATTTAATTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAACCCACATTACATCATTaGTTACAGGGAATAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TTSVVLDNKLDATIRDSQPTLHH*LQGIKD Trigger: GTCCTTTATTCCCTGTAACAAATGATGTAATGTGGG...TTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR TCA 72 bp | AACGTTTTGTTTCTATGGCATGTAGCTCTCCTTGAGTaGCCACTTCTGTGGTATTGGACAACAAACTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: NVLFLWHVALLE*PLLWYWTTNWM Trigger: CATCCAGTTTGTTGTCCAATACCACAGAAGTGGTCACTCAAGGAGAGCTACATGCCATAGAAACAAAACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | TACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTGAGCCACAGGTATCCCTCCCCTAAGCCCTaGGTTAAATGCTTTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YESESQLLQYLLSLSHRYPSPKP*VKCFLL Trigger: CAGAAGAAAGCATTTAACCAAGGGCTTAGGGGAGGG...ATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | TACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTGAGCCACAGGTATTGCCAGGGCCTGAATTaGATGCGTGGGACATACATA | + |
|
Preference number: 3 (lower is better) Translates to: YESESQLLQYLLSLSHRYCQGLN*MRGTYI Trigger: TATGTATGTCCCACGCATCAAATTCAGGCCCTGGCA...ATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTGCCTTTGCCCTCTTCAAATTTAACCTACATTCCAACTGTTATGACACCTTCACAGGGCATAGCATaGGTGCTCAAAACCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FVPLPSSNLTYIPTVMTPSQGIA*VLKTFQ Trigger: CTGAAAGGTTTTGAGCACCAATGCTATGCCCTGTGA...AGGTGTCATAACAGTTGGAATGTAGGTTAAATTTGAAGAGGGCAAAGGCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTCACCTGCTATCCTCCACGAGTAAATTAAATGTCACCTCTGGTTTCCTACAGGGATTCTCAAATTaGGGCTCTAGATATATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GFHLLSSTSKLNVTSGFLQGFSN*GSRYIK Trigger: CTTTATATATCTAGAGCCCAAATTTGAGAATCCCTG...TAGGAAACCAGAGGTGACATTTAATTTACTCGTGGAGGATAGCAGGTGAAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCATACTACTTTTGTCTTATGCTCTCATAAAAATGAGACAGGGCCAGTGCCCACATTACATCATTaGTTACAGGGAATAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HLHTTFVLCSHKNETGPVPTLHH*LQGIKD Trigger: GTCCTTTATTCCCTGTAACAAATGATGTAATGTGGG...CACTGGCCCTGTCTCATTTTTATGAGAGCATAAGACAAAAGTAGTATGAAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR GCA 72 bp | GGGCTCTCTTCAAGACGCTTCACACAGCTTATCTATTaGAACAATTCTTCAATATTAAAGGTGAAAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLSSRRFTQLIY*NNSSILKVKAE Trigger: CTCAGCTTTCACCTTTAATATTGAAGAATTGTTGCAATAGATAAGCTGTGTGAAGCGTCTTGAAGAGAGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CCA 72 bp | ATAGCATTGGTGCTCAAAACCTTTCAGAGCAGATCCTaGAGCATTTCAGATTTCAGAATTTTGCATTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IALVLKTFQSRS*SISDFRILHLR Trigger: CCTCAAATGCAAAATTCTGAAATCTGAAATGCTCCAGGATCTGCTCTGAAAGGTTTTGAGCACCAATGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR TCA 72 bp | AATCAGAATCACAGTTACTGCAATATTTACTTTCTCTaGGCCACAGGTATGACTCCCAAACTGAGTAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NQNHSYCNIYFL*ATGMTPKLSRN Trigger: GTTTCTACTCAGTTTGGGAGTCATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTACACTTTTACACACACACACACACCTTCATACTACTTTTGTCTTATGCCCCACATTACATCATTaGTTACAGGGAATAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LITLLHTHTHLHTTFVLCPTLHH*LQGIKD Trigger: GTCCTTTATTCCCTGTAACAAATGATGTAATGTGGG...GCATAAGACAAAAGTAGTATGAAGGTGTGTGTGTGTGTGTAAAAGTGTAATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTATACTACTACCCGCTTGTTAGTTCTAATTTGAGACTACTTACAACAAGCATCACGTTCCCATCATaGTGCTTTGACTATCATATG | + |
|
Preference number: 3 (lower is better) Translates to: MLYYYPLVSSNLRLLTTSITFPS*CFDYHM Trigger: CATATGATAGTCAAAGCACAATGATGGGAACGTGAT...GCTTGTTGTAAGTAGTCTCAAATTAGAACTAACAAGCGGGTAGTAGTATAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAAATTTAACCTACATTCCAACTGTTATGACACCTCCAATGTCCCTTATCTTCAGAATTTTGCATTaGAGGTGCTCAGCACTAACA | + |
|
Preference number: 3 (lower is better) Translates to: SSNLTYIPTVMTPPMSLIFRILH*RCSALT Trigger: TGTTAGTGCTGAGCACCTCAAATGCAAAATTCTGAA...GATAAGGGACATTGGAGGTGTCATAACAGTTGGAATGTAGGTTAAATTTGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTACCACTTGCACAGATGGAAGCAGCCACTGGAGAAAGTACCTCATTCATTACCATAATGAAGGCGTaGAGTGACCGGGGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QVPLAQMEAATGESTSFITIMKA*SDRGRR Trigger: ACGCCTCCCCCGGTCACTCCACGCCTTCATTATGGT...AATGAATGAGGTACTTTCTCCAGTGGCTGCTTCCATCTGTGCAAGTGGTACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CAA 72 bp | ATGTGTACAATCCATCACAGGCAATGCCTGGATGCTTaGGGCTCCATGGGGCAGTTCTTTGTCTTTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MCTIHHRQCLDA*GSMGQFFVFSP Trigger: GGGGGAAAAGACAAAGAACTGCCCCATGGAGCCCAAAGCATCCAGGCATTGCCTGTGATGGATTGTACACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATACCATAATGAAGGCGTaGAGTGACCGGGGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HFCGIGQQTGCHHQGFSNTIMKA*SDRGRR Trigger: ACGCCTCCCCCGGTCACTCCACGCCTTCATTATGGT...ATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CAA 72 bp | GGAGCGGTAACAGCTGCCCTCACTGGGCACACTTGCTaGGTCCATAGTTTTCCATTCTCACTAGTATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: GAVTAALTGHTC*VHSFPFSLVLP Trigger: AGGTAATACTAGTGAGAATGGAAAACTATGGACCAAGCAAGTGTGCCCAGTGAGGGCAGCTGTTACCGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | CCACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAAGGCAGAGACAGGAGATaGAAAACAGCAGGAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLWYWTTNWMPPSGILKGRDRR*KTAGEQ Trigger: TTGCTCTCCTGCTGTTTTCCATCTCCTGTCTCTGCC...TTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR TCA 90 bp | GCCAATTTGGAGACACAATGTGTACAATCCATCACAGGCAATGCCTGGATGCTTAAAGCTGCAGATGAATaGGGTAGTAAGGGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ANLETQCVQSITGNAWMLKAADE*GSKGRD Trigger: GTCTCTGCCCTTACTACCTCATTCATCTGCAGCTTT...AAGCATCCAGGCATTGCCTGTGATGGATTGTACACATTGTGTCTCCAAATTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATGGCAGAGACAGGAGATaGAAAACAGCAGGAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HFCGIGQQTGCHHQGFSNGRDRR*KTAGEQ Trigger: TTGCTCTCCTGCTGTTTTCCATCTCCTGTCTCTGCC...ATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTAGTATACACAGAAAAGGCTAAACAACTGATTACACTTTTACACACACACACCATAATGAAGGCGTaGAGTGACCGGGGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLVYTEKAKQLITLLHTHTIMKA*SDRGRR Trigger: ACGCCTCCCCCGGTCACTCCACGCCTTCATTATGGT...GTGTGTGTGTAAAAGTGTAATCAGTTGTTTAGCCTTTTCTGTGTATACTAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR GCA 90 bp | CCACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATCATATAAAACCTTCTaGCACTTGACTTCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLWYWTTNWMPPSGILKSYKTF*HLTSGV Trigger: CACCCCAGAAGTCAAGTGGCAGAAGGTTTTATATGA...TTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | ACCACTTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAGTTTCTTCTGTAACATaGGCCACAGTGCAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSVVLDNKLDATIRDSQVSSVT*ATVQRS Trigger: AGATCTTTGCACTGTGGCCCATGTTACAGAAGAAAC...TTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATTTGGAGACACAATGTGTACAATCCATCACAGGCAATGCCTGGATGCTTGTTTCTTCTGTAACATaGGCCACAGTGCAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ANLETQCVQSITGNAWMLVSSVT*ATVQRS Trigger: AGATCTTTGCACTGTGGCCCATGTTACAGAAGAAAC...AAGCATCCAGGCATTGCCTGTGATGGATTGTACACATTGTGTCTCCAAATTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CAA 72 bp | CAGAGCAGATCCTGGAGCATTTCAGATTTCAGAATTTaGCATTTGAGGTGCTCAGCACTAACATCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSRSWSISDFRI*HLRCSALTSSF Trigger: GAAGCTCGATGTTAGTGCTGAGCACCTCAAATGCAAAATTCTGAAATCTGAAATGCTCCAGGATCTGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCACCTGCTATCCTCCACGAGTAAATTAAATGTCACCTCTGGTTTCCTATCATATAAAACCTTCTaGCACTTGACTTCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFHLLSSTSKLNVTSGFLSYKTF*HLTSGV Trigger: CACCCCAGAAGTCAAGTGGCAGAAGGTTTTATATGA...TAGGAAACCAGAGGTGACATTTAATTTACTCGTGGAGGATAGCAGGTGAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CAA 72 bp | GACTTCACAATTTGTCCCATCTTTAGACAAGATGGATaGCTCATCACCAGCAGCAGGGTCCAATTACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DFTICPIFRQDG*LITSSRVQLLD Trigger: ATCAAGTAATTGGACCCTGCTGCTGGTGATGAGCAATCCATCTTGTCTAAAGATGGGACAAATTGTGAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCTTCTGATCTCAGCTCTACCATCTAGATCAGTCGGCTGCTTCAAGAGTTCAAAGAAGATGAGATaGCCTAACAGCATAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CFLLISALPSRSVGCFKSSKKMR*PNSIKT Trigger: AGTCTTTATGCTGTTAGGCCATCTCATCTTCTTTGA...ACTCTTGAAGCAGCCGACTGATCTAGATGGTAGAGCTGAGATCAGAAGAAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGGTATTGGACAACAAACTGGATGCCACCATCAGGGATTCTCAAATTTGGTTTCTTCTGTAACATaGGCCACAGTGCAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FCGIGQQTGCHHQGFSNLVSSVT*ATVQRS Trigger: AGATCTTTGCACTGTGGCCCATGTTACAGAAGAAAC...CAAATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTGTCCAATACCACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | TACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTGAGCCACAGGTATGGCAGAGACAGGAGATaGAAAACAGCAGGAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YESESQLLQYLLSLSHRYGRDRR*KTAGEQ Trigger: TTGCTCTCCTGCTGTTTTCCATCTCCTGTCTCTGCC...ATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR TCA 90 bp | TACGAATCAGAATCACAGTTACTGCAATATTTACTTTCTCTGAGCCACAGGTATAAAGCTGCAGATGAATaGGGTAGTAAGGGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YESESQLLQYLLSLSHRYKAADE*GSKGRD Trigger: GTCTCTGCCCTTACTACCTCATTCATCTGCAGCTTT...ATACCTGTGGCTCAGAGAAAGTAAATATTGCAGTAACTGTGATTCTGATTCGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR TCA 90 bp | ACTGATTACACTTTTACACACACACACACACCTTCATACTACTTTTGTCTTATGAAAGCTGCAGATGAATaGGGTAGTAAGGGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TDYTFTHTHTPSYYFCLMKAADE*GSKGRD Trigger: GTCTCTGCCCTTACTACCTCATTCATCTGCAGCTTT...CATAAGACAAAAGTAGTATGAAGGTGTGTGTGTGTGTGTAAAAGTGTAATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CAA 72 bp | CACTTTTACACACACACACACACCTTCATACTACTTTaGTCTTATGCTCTCATAAAAATGAGACAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFYTHTHTFILL*SYALIKMRQGQ Trigger: CTGGCCCTGTCTCATTTTTATGAGAGCATAAGACAAAAGTAGTATGAAGGTGTGTGTGTGTGTGTAAAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CAA 72 bp | CAACAAACTGGATGCCACCATCAGGGATTCTCAAATTaGGGCTCTAGATATATAAAGGTGTCCCTTAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QQTGCHHQGFSN*GSRYIKVSLSI Trigger: TATACTAAGGGACACCTTTATATATCTAGAGCCCAAATTTGAGAATCCCTGATGGTGGCATCCAGTTTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| 3UTR CAA 72 bp | AGCCACTGGAGAAAGTACCTCATTCATTTTGTGCCTTaGCCCTCTTCAAATTTAACCTACATTCCAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHWRKYLIHFVP*PSSNLTYIPTV Trigger: AACAGTTGGAATGTAGGTTAAATTTGAAGAGGGCAAAGGCACAAAATGAATGAGGTACTTTCTCCAGTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR GCA 90 bp | TACACAGAAAAGGCTAAACAACTGATTACACTTTTACACACACACACACACCTTTCATATAAAACCTTCTaGCACTTGACTTCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTEKAKQLITLLHTHTHLSYKTF*HLTSGV Trigger: CACCCCAGAAGTCAAGTGGCAGAAGGTTTTATATGA...AAGGTGTGTGTGTGTGTGTAAAAGTGTAATCAGTTGTTTAGCCTTTTCTGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTATACTACTACCCGCTTGTTAGTTCTAATTTGAGACTACTTACAACAAGCTCAAAGAAGATGAGATaGCCTAACAGCATAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: MLYYYPLVSSNLRLLTTSSKKMR*PNSIKT Trigger: AGTCTTTATGCTGTTAGGCCATCTCATCTTCTTTGA...GCTTGTTGTAAGTAGTCTCAAATTAGAACTAACAAGCGGGTAGTAGTATAGCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS CCA 90 bp | CACAGTGCAAAGATCTGGATAGCAAACGTCACCATAATGAAGGCGTaGAGTGACCGGGGGAGGCGTGAGGCCAGGCAAACAGAAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSAKIWIANVTIMKA*SDRGRREARQTEAK Trigger: CTTTGCTTCTGTTTGCCTGGCCTCACGCCTCCCCCGGTCACTCCACGCCTTCATTATGGTGACGTTTGCTATCCAGATCTTTGCACTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
||
| CDS CCA 72 bp | AAGATCTGGATAGCAAACGTCACCATAATGAAGGCGTaGAGTGACCGGGGGAGGCGTGAGGCCAGGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: KIWIANVTIMKA*SDRGRREARQT Trigger: TGTTTGCCTGGCCTCACGCCTCCCCCGGTCACTCCACGCCTTCATTATGGTGACGTTTGCTATCCAGATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028021.7 ENSMUST00000111594.3 ENSMUST00000193784.2 |
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