Pregenerated sensors for PIGA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031381Ensembl transcript IDs: ENSMUST00000033754.15, ENSMUST00000112255.8, ENSMUST00000112257.10, ENSMUST00000151911.9, ENSMUST00000208697.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGCCAGCAAAGCAAACATGTAGCCCGTCACAGGGCCACAGTGTaGGATGAGCCTGTCCAATCTCTTGTGCATTGGCAAAACAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: HSQQSKHVARHRATV*DEPVQSLVHWQNSF Trigger: GAAACTGTTTTGCCAATGCACAAGAGATTGGACAGGCTCATCTCACACTGTGGCCCTGTGACGGGCTACATGTTTGCTTTGCTGGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR GCA 90 bp | CAGAATCACAATACTGACAGAATGGAACACCCACAAGTGGCTCGCTaGTCTCATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: QNHNTDRMEHPQVAR*SHFSLFPTQTHAKE Trigger: CTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATGAGAGCAGCGAGCCACTTGTGGGTGTTCCATTCTGTCAGTATTGTGATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR CCA 90 bp | CTCCTGTACAGAATCACAATACTGACAGAATGGAACACCCACAAGTaGCTCGCTGCTCTCATTTTAGTCTGTTCCCCACACAAACCCATG | + |
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Preference number: 1 (lower is better) Translates to: LLYRITILTEWNTHK*LAALILVCSPHKPM Trigger: CATGGGTTTGTGTGGGGAACAGACTAAAATGAGAGCAGCGAGCCACTTGTGGGTGTTCCATTCTGTCAGTATTGTGATTCTGTACAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAAGGGCTCTTCCTAAGAGAATaGATATACATAGAACAGGTCAGAAAGGTACTTGGTGTATGCCAG | + |
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Preference number: 1 (lower is better) Translates to: EREREREREGLFLRE*IYIEQVRKVLGVCQ Trigger: CTGGCATACACCAAGTACCTTTCTGACCTGTTCTATGTATATGCATTCTCTTAGGAAGAGCCCTTCTCTCTCTCTCTCTCTCTCTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR CCA 90 bp | GTCAATGGTTTTCTTTTGTTCGGGAACCATTACAACATCAAAGGTTaGGCAGCATTTATAGCCACTCTATCCATTTCTCTTCTTAGATGT | + |
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Preference number: 1 (lower is better) Translates to: VNGFLLFGNHYNIKG*AAFIATLSISLLRC Trigger: ACATCTAAGAAGAGAAATGGATAGAGTGGCTATAAATGCTGCCCAACCTTTGATGTTGTAATGGTTCCCGAACAAAAGAAAACCATTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
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| 3UTR TCA 90 bp | GCATTTATAGCCACTCTATCCATTTCTCTTCTTAGATGTATAAACTaGTTATCTGACCTTCCCTTGCAAGAGTTACCCGTCATTTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: AFIATLSISLLRCIN*LSDLPLQELPVILK Trigger: CTTTAAAATGACGGGTAACTCTTGCAAGGGAAGGTCAGATAATCAGTTTATACATCTAAGAAGAGAAATGGATAGAGTGGCTATAAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | CCAACCTTTGTGCTGACGACCTGCAAACCACAACTGGCAGCTTCCACGATGGCCCCCACACTCAGGAATTaGATAAGTGTTTATCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PTFVLTTCKPQLAASTMAPTLRN*ISVYLF Trigger: AAAAAGATAAACACTTATGCAATTCCTGAGTGTGGG...GGCCATCGTGGAAGCTGCCAGTTGTGGTTTGCAGGTCGTCAGCACAAAGGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CATGACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCCCTGCAAACCACAACTaGCAGCTTCCACGATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HDFNDAQRRIHDLALKQFPANHN*QLPRWP Trigger: TGGCCATCGTGGAAGCTGCCAGTTGTGGTTTGCAGG...GAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTCTTATCACGAGGCCATTGATGAGTCCAGGCTCTCCTTGGCCCAGTAGCGTCTTCACTACATTGTaGATATTTTCTGGAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SFLITRPLMSPGSPWPSSVFTTL*IFSGAG Trigger: GCCAGCTCCAGAAAATATCCACAATGTAGTGAAGAC...GCTACTGGGCCAAGGAGAGCCTGGACTCATCAATGGCCTCGTGATAAGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTCTTATCACGAGGCCATTGATGAGTCCAGGCTCTCCTTGGCCCAGTAGCATCAATGAAAGAGTCTaGAGTCATCCACTGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SFLITRPLMSPGSPWPSSINERV*SHPLQE Trigger: TTCCTGCAGTGGATGACTCCAGACTCTTTCATTGAT...GCTACTGGGCCAAGGAGAGCCTGGACTCATCAATGGCCTCGTGATAAGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGAAGGGCTCTTCCTAAGAGAATGCATATACATAGAACAGGTCAGAAACCTGCAAACCACAACTaGCAGCTTCCACGATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RERRALPKRMHIHRTGQKPANHN*QLPRWP Trigger: TGGCCATCGTGGAAGCTGCCAGTTGTGGTTTGCAGG...TTTCTGACCTGTTCTATGTATATGCATTCTCTTAGGAAGAGCCCTTCTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | CGCTGCTCTCATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAAGAAAACTGTCCTACCTaGGTGGCTAAACCATTATCC | + |
|
Preference number: 2 (lower is better) Translates to: RCSHFSLFPTQTHAKEFKENCPT*VAKPLS Trigger: GGATAATGGTTTAGCCACTCAGGTAGGACAGTTTTC...TTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATGAGAGCAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | CTAATTTCATTTCAGATAATTATGAGTAGCACAGTGGAAGAGTGTCCCACATCCCACAGGGCCACAGTGTaGGATGAGCCTGTCCAATCT | + |
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Preference number: 2 (lower is better) Translates to: LISFQIIMSSTVEECPTSHRATV*DEPVQS Trigger: AGATTGGACAGGCTCATCTCACACTGTGGCCCTGTG...GGATGTGGGACACTCTTCCACTGTGCTACTCATAATTATCTGAAATGAAATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGAACCATCTAGGTCAACTTTTCATACACAGCAGGTGTTCAAACATGCTGGTCAGAAAGGTACTTaGTGTATGCCAGCGATGATC | + |
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Preference number: 2 (lower is better) Translates to: SQEPSRSTFHTQQVFKHAGQKGT*CMPAMI Trigger: GATCATCGCTGGCATACACCAAGTACCTTTCTGACC...AGCATGTTTGAACACCTGCTGTGTATGAAAAGTTGACCTAGATGGTTCCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGGAACCATCTAGGTCAACTTTTCATACACAGCAGGTGTTCAAACATGCTGAAAACTGTCCTACCTaGGTGGCTAAACCATTATCC | + |
|
Preference number: 2 (lower is better) Translates to: SQEPSRSTFHTQQVFKHAENCPT*VAKPLS Trigger: GGATAATGGTTTAGCCACTCAGGTAGGACAGTTTTC...AGCATGTTTGAACACCTGCTGTGTATGAAAAGTTGACCTAGATGGTTCCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | CTAATTTCATTTCAGATAATTATGAGTAGCACAGTGGAAGAGTGTCCCACATCCGGTATCCAGGAAGCCTaGAAATGGTTTCTGTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LISFQIIMSSTVEECPTSGIQEA*KWFLSH Trigger: GTGTGACAGAAACCATTTTCAGGCTTCCTGGATACC...GGATGTGGGACACTCTTCCACTGTGCTACTCATAATTATCTGAAATGAAATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCTCAGCGCATAAAGATTTAAATAAGACTGAACGGTTTGGACAAGGTCATGCAGGTGTTCAAACATaGTGGCAACCAATAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: PVSAHKDLNKTERFGQGHAGVQT*WQPIDG Trigger: ACCATCTATTGGTTGCCAGCATGTTTGAACACCTGC...ATGACCTTGTCCAAACCGTTCAGTCTTATTTAAATCTTTATGCGCTGAGACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | CATGACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCGGGCTTGCTTCTACCTaGTTTGGGATATCTTATCAT | + |
|
Preference number: 2 (lower is better) Translates to: HDFNDAQRRIHDLALKQFGLAST*FGISYH Trigger: ATGATAAGATATCCCAAAGCAGGTAGAAGCAAGCCC...GAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGAACCATCTAGGTCAACTTTTCATACACAGCAGGTGTTCAAACATGCTGTCTTCACTACATTGTaGATATTTTCTGGAGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SQEPSRSTFHTQQVFKHAVFTTL*IFSGAG Trigger: GCCAGCTCCAGAAAATATCCACAATGTAGTGAAGAC...AGCATGTTTGAACACCTGCTGTGTATGAAAAGTTGACCTAGATGGTTCCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | CTAATTTCATTTCAGATAATTATGAGTAGCACAGTGGAAGAGTGTCCCACATCCGAAAACTGTCCTACCTaGGTGGCTAAACCATTATCC | + |
|
Preference number: 2 (lower is better) Translates to: LISFQIIMSSTVEECPTSENCPT*VAKPLS Trigger: GGATAATGGTTTAGCCACTCAGGTAGGACAGTTTTC...GGATGTGGGACACTCTTCCACTGTGCTACTCATAATTATCTGAAATGAAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAGAAGGGCTCTTCCTAAGAGAATGCATATACATAGAACAGGTCAGAAACCAGAGAAGGATACATaGCCTTGCCTTAAAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: RERRALPKRMHIHRTGQKPEKDT*PCLKTV Trigger: AACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGG...TTTCTGACCTGTTCTATGTATATGCATTCTCTTAGGAAGAGCCCTTCTCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | CGCTGCTCTCATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAACCCACACTCAGGAATTaGATAAGTGTTTATCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: RCSHFSLFPTQTHAKEFKPTLRN*ISVYLF Trigger: AAAAAGATAAACACTTATGCAATTCCTGAGTGTGGG...TTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATGAGAGCAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | TACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGAACTCTTCCTAAGAGAATaGATATACATAGAACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: YTAGVQTCWQPIDGLAQELFLRE*IYIEQV Trigger: GACCTGTTCTATGTATATGCATTCTCTTAGGAAGAG...TTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | TACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGAAACACCTTTTCTGTTCTaGTTAGAAACCATAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: YTAGVQTCWQPIDGLAQETPFLF*LETIKA Trigger: TGCCTTTATGGTTTCTAAGCAGAACAGAAAAGGTGT...TTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGAACCATCTAGGTCAACTTTTCATACACAGCAGGTGTTCAAACATGCTCTAAATAAACCATTCTaGAGAAAAGCCTTTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SQEPSRSTFHTQQVFKHALNKPF*RKAFPH Trigger: GTGGGGAAAGGCTTTTCTCCAGAATGGTTTATTTAG...AGCATGTTTGAACACCTGCTGTGTATGAAAAGTTGACCTAGATGGTTCCTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CTAATTTCATTTCAGATAATTATGAGTAGCACAGTGGAAGAGTGTCCCACATCCATTGTGGATATTTTCTaGAGCTGGCAATGTCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: LISFQIIMSSTVEECPTSIVDIF*SWQCPR Trigger: TCGGGGACATTGCCAGCTCCAGAAAATATCCACAAT...GGATGTGGGACACTCTTCCACTGTGCTACTCATAATTATCTGAAATGAAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAAGGATTAATAATTGTGGATATTTTCTaGAGCTGGCAATGTCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: HFSLFPTQTHAKEFKGLIIVDIF*SWQCPR Trigger: TCGGGGACATTGCCAGCTCCAGAAAATATCCACAAT...TATTAATCCTTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | TCATACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAACCCACACTCAGGAATTaGATAAGTGTTTATCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SYTAGVQTCWQPIDGLAQPTLRN*ISVYLF Trigger: AAAAAGATAAACACTTATGCAATTCCTGAGTGTGGG...TTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | AACCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGCAATCCAGAAACATTTaGCCTTTCAGCACCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: NQTQIYLFYIGGNQVIGMQSRNI*PFSTQG Trigger: GCCTTGGGTGCTGAAAGGCCAAATGTTTCTGGATTG...CATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTTCAATCCAGAAACATTTaGCCTTTCAGCACCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PNTNISLLYRWQPSNRHVQSRNI*PFSTQG Trigger: GCCTTGGGTGCTGAAAGGCCAAATGTTTCTGGATTG...AACATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | CATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAAGGATTAATACTTTATTACTGGACATaGGCATGTTTTAGCACACTG | + |
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Preference number: 2 (lower is better) Translates to: HFSLFPTQTHAKEFKGLILYYWT*ACFSTL Trigger: CAGTGTGCTAAAACATGCTCATGTCCAGTAATAAAG...TATTAATCCTTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | AACCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGCCCCACACAAACCCATaGGAAAGAGTTCAAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: NQTQIYLFYIGGNQVIGMPHTNP*ERVQRI Trigger: AATCCTTTGAACTCTTTCGCATGGGTTTGTGTGGGG...CATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CATGACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCATATCACATACAGTTTaGGATTTAAAAACCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: HDFNDAQRRIHDLALKQFISHTV*DLKTHG Trigger: GCCATGGGTTTTTAAATCCCAAACTGTATGTGATAT...GAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCTCAGCGCATAAAGATTTAAATAAGACTGAACGGTTTGGACAAGGTCATCATGTTTTAGCACACTaGTTTCATGTGTATGACATC | + |
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Preference number: 2 (lower is better) Translates to: PVSAHKDLNKTERFGQGHHVLAH*FHVYDI Trigger: GATGTCATACACATGAAACCAGTGTGCTAAAACATG...ATGACCTTGTCCAAACCGTTCAGTCTTATTTAAATCTTTATGCGCTGAGACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR TCA 90 bp | CCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTTACAGAATCACAATACTaGCAGAATGGAACACCCACA | + |
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Preference number: 2 (lower is better) Translates to: PNTNISLLYRWQPSNRHVTESQY*QNGTPT Trigger: TGTGGGTGTTCCATTCTGTCAGTATTGTGATTCTGT...AACATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | CATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAAGGATTAATACTCTTCCTAAGAGAATaGATATACATAGAACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HFSLFPTQTHAKEFKGLILFLRE*IYIEQV Trigger: GACCTGTTCTATGTATATGCATTCTCTTAGGAAGAG...TATTAATCCTTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR GCA 90 bp | CATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAAGGATTAATAACACCTTTTCTGTTCTaGTTAGAAACCATAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: HFSLFPTQTHAKEFKGLITPFLF*LETIKA Trigger: TGCCTTTATGGTTTCTAAGCAGAACAGAAAAGGTGT...TATTAATCCTTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | AACCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGCTGGCAACCAATAGATaGTCTTGCTCAAGAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: NQTQIYLFYIGGNQVIGMLATNR*SCSRNH Trigger: GTGATTTCTTGAGCAAGACCATCTATTGGTTGCCAG...CATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCTCAGCGCATAAAGATTTAAATAAGACTGAACGGTTTGGACAAGGTCATATATCACATACAGTTTaGGATTTAAAAACCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: PVSAHKDLNKTERFGQGHISHTV*DLKTHG Trigger: GCCATGGGTTTTTAAATCCCAAACTGTATGTGATAT...ATGACCTTGTCCAAACCGTTCAGTCTTATTTAAATCTTTATGCGCTGAGACAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAAGGATTAATACATGTTTTAGCACACTaGTTTCATGTGTATGACATC | + |
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Preference number: 2 (lower is better) Translates to: HFSLFPTQTHAKEFKGLIHVLAH*FHVYDI Trigger: GATGTCATACACATGAAACCAGTGTGCTAAAACATG...TATTAATCCTTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTTCAATCTCTTGTGCATTaGCAAAACAGTTTCCTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: PNTNISLLYRWQPSNRHVQSLVH*QNSFLR Trigger: TCGAAGGAAACTGTTTTGCCAATGCACAAGAGATTG...AACATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTTTACAACATCAAAGGTTaGGCAGCATTTATAGCCACT | + |
|
Preference number: 2 (lower is better) Translates to: PNTNISLLYRWQPSNRHVYNIKG*AAFIAT Trigger: AGTGGCTATAAATGCTGCCCAACCTTTGATGTTGTA...AACATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTTTCTCTTTTATATCGGTaGCAACCAAGTAATAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: PNTNISLLYRWQPSNRHVSLLYR*QPSNRH Trigger: ATGCCTATTACTTGGTTGCCACCGATATAAAAGAGA...AACATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR GCA 90 bp | AACCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGCCCACACTCAGGAATTaGATAAGTGTTTATCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NQTQIYLFYIGGNQVIGMPTLRN*ISVYLF Trigger: AAAAAGATAAACACTTATGCAATTCCTGAGTGTGGG...CATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR TCA 72 bp | CCGGAAGGACTTCGGGAATCCCACCAACCTTTGTGCTaGCGACCTGCAAACCACAACTGGCAGCTTCCACGA | + |
|
Preference number: 3 (lower is better) Translates to: PEGLRESHQPLC*RPANHNWQLPR Trigger: TCGTGGAAGCTGCCAGTTGTGGTTTGCAGGTCGTCAGCACAAAGGTTGGTGGGATTCCCGAAGTCCTTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR GCA 72 bp | ACTTCGGGAATCCCACCAACCTTTGTGCTGACGACCTaGAAACCACAACTGGCAGCTTCCACGATGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: TSGIPPTFVLTT*KPQLAASTMAM Trigger: CATGGCCATCGTGGAAGCTGCCAGTTGTGGTTTGCAGGTCGTCAGCACAAAGGTTGGTGGGATTCCCGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR TCA 72 bp | CAAAGCAAACATGTAGCCCGTCACAGGGCCACAGTGTaGGATGAGCCTGTCCAATCTCTTGTGCATTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QSKHVARHRATV*DEPVQSLVHWQ Trigger: TTGCCAATGCACAAGAGATTGGACAGGCTCATCTCACACTGTGGCCCTGTGACGGGCTACATGTTTGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAACATTCCACGTATCCCTaGAGTGGACCCAGTAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYTAGVQTCWQPIDGLAQHSTYP*SGPSKC Trigger: ACACTTACTGGGTCCACTCAAGGGATACGTGGAATG...TTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | TACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGAACATTCCACGTATCCCTaGAGTGGACCCAGTAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YTAGVQTCWQPIDGLAQEHSTYP*SGPSKC Trigger: ACACTTACTGGGTCCACTCAAGGGATACGTGGAATG...TTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR CCA 72 bp | AGAATCACAATACTGACAGAATGGAACACCCACAAGTaGCTCGCTGCTCTCATTTTAGTCTGTTCCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: RITILTEWNTHK*LAALILVCSPH Trigger: GTGTGGGGAACAGACTAAAATGAGAGCAGCGAGCCACTTGTGGGTGTTCCATTCTGTCAGTATTGTGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | TACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGAAAGGTCAGAAAGGTACTaGGTGTATGCCAGCGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: YTAGVQTCWQPIDGLAQERSERY*VYASDD Trigger: ATCATCGCTGGCATACACCAAGTACCTTTCTGACCT...TTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR TCA 72 bp | TTCTGCTTAGAAACCATAAAGGCATTTATGGGGGACTaGACTGTGCACTATAAAAGCAGAGGGTTGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FCLETIKAFMGD*TVHYKSRGLAS Trigger: GCTGGCCAACCCTCTGCTTTTATAGTGCACAGTTCAGTCCCCCATAAATGCCTTTATGGTTTCTAAGCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR CCA 72 bp | CACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATaGTCTTGCTCAAGAAATCACATTCCACGTATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSRCSNMLATNR*SCSRNHIPRIP Trigger: AGGGATACGTGGAATGTGATTTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR TCA 72 bp | TGTATGCCAGCGATGATCTCCTGTCATTCAGTAGCTTaGGCATTTCGCCATGTTGACAGTTTTACCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CMPAMISCHSVA*AFRHVDSFTTS Trigger: AGAAGTGGTAAAACTGTCAACATGGCGAAATGCTCAAGCTACTGAATGACAGGAGATCATCGCTGGCATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | TACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGAATTACAACATCAAAGGTaGGGCAGCATTTATAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: YTAGVQTCWQPIDGLAQELQHQR*GSIYSH Trigger: GTGGCTATAAATGCTGCCCAACCTTTGATGTTGTAA...TTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
||
| 3UTR GCA 72 bp | AGAGAGAGAGAGAGAGAAGGGCTCTTCCTAAGAGAATaGATATACATAGAACAGGTCAGAAAGGTACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: REREREGLFLRE*IYIEQVRKVLG Trigger: ACCAAGTACCTTTCTGACCTGTTCTATGTATATGCATTCTCTTAGGAAGAGCCCTTCTCTCTCTCTCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR TCA 72 bp | GCCACTCTATCCATTTCTCTTCTTAGATGTATAAACTaGTTATCTGACCTTCCCTTGCAAGAGTTACCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: ATLSISLLRCIN*LSDLPLQELPV Trigger: GACGGGTAACTCTTGCAAGGGAAGGTCAGATAATCAGTTTATACATCTAAGAAGAGAAATGGATAGAGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
||
| 3UTR CCA 72 bp | GTCAACTTTTCATACACAGCAGGTGTTCAAACATGCTaGCAACCAATAGATGGTCTTGCTCAAGAAATCACA | + |
|
Preference number: 3 (lower is better) Translates to: VNFSYTAGVQTC*QPIDGLAQEIT Trigger: TGTGATTTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTATGAAAAGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR CCA 72 bp | AGAATGCATATACATAGAACAGGTCAGAAAGGTACTTaGTGTATGCCAGCGATGATCTCCTGTCATTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RMHIHRTGQKGT*CMPAMISCHSV Trigger: TACTGAATGACAGGAGATCATCGCTGGCATACACCAAGTACCTTTCTGACCTGTTCTATGTATATGCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAAGGATTAATACCAATCTCTTGTGCATaGGCAAAACAGTTTCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: HFSLFPTQTHAKEFKGLIPISCA*AKQFPS Trigger: CGAAGGAAACTGTTTTGCCAATGCACAAGAGATTGG...TATTAATCCTTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTATAAAAGCAGAGGGTaGGCCAGCACAAGCATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NQTQIYLFYIGGNQVIGMYKSRG*ASTSIN Trigger: GTTGATGCTTGTGCTGGCCAACCCTCTGCTTTTATA...CATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTCTCAGCGCATAAAGATTTAAATAAGACTGAACGGTTTGGACAAGGTCATATAAGACTGAACGGTTaGGACAAGGTCATTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PVSAHKDLNKTERFGQGHIRLNG*DKVIFL Trigger: GAGAAAAATGACCTTGTCCAAACCGTTCAGTCTTAT...ATGACCTTGTCCAAACCGTTCAGTCTTATTTAAATCTTTATGCGCTGAGACAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTCTCAGCGCATAAAGATTTAAATAAGACTGAACGGTTTGGACAAGGTCATCATATCACATACAGTTaGGGATTTAAAAACCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: PVSAHKDLNKTERFGQGHHITYS*GFKNPW Trigger: CCATGGGTTTTTAAATCCCAAACTGTATGTGATATG...ATGACCTTGTCCAAACCGTTCAGTCTTATTTAAATCTTTATGCGCTGAGACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR CCA 72 bp | TTTCTTTTGTTCGGGAACCATTACAACATCAAAGGTTaGGCAGCATTTATAGCCACTCTATCCATTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLLFGNHYNIKG*AAFIATLSISL Trigger: AAGAGAAATGGATAGAGTGGCTATAAATGCTGCCCAACCTTTGATGTTGTAATGGTTCCCGAACAAAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | CGCTGCTCTCATTTTAGTCTGTTCCCCACACAAACCCATGCGAAAGAGTTCAAACCTGCAAACCACAACTaGCAGCTTCCACGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCSHFSLFPTQTHAKEFKPANHN*QLPRWP Trigger: TGGCCATCGTGGAAGCTGCCAGTTGTGGTTTGCAGG...TTTGAACTCTTTCGCATGGGTTTGTGTGGGGAACAGACTAAAATGAGAGCAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 |
||
| CDS-3UTR TCA 90 bp | GAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTTGTGCCCTCTCTCAATaGGGCACTGAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPYRGSKSNSKAQHRSKTCALSQ*GTERAG Trigger: ACCAGCTCTCTCAGTGCCTCATTGAGAGAGGGCACA...AGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | CATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCCTTTGTGCCCTCTCTCAATaGGGCACTGAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTEVANPTLKPNTGAKLLCALSQ*GTERAG Trigger: ACCAGCTCTCTCAGTGCCTCATTGAGAGAGGGCACA...AAGGAGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | AACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCCACAGGGCCACAGTGTaGGATGAGCCTGTCCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NHTEVANPTLKPNTGAKLHRATV*DEPVQS Trigger: AGATTGGACAGGCTCATCTCACACTGTGGCCCTGTG...GAGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR GCA 90 bp | TACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGAAGAAGGAGGCTGGCCTTaGCCACCTCCTCTTCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: YTAGVQTCWQPIDGLAQEEGGWP*PPPLLL Trigger: CAATAGAAGAGGAGGTGGGCAAGGCCAGCCTCCTTC...TTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR GCA 90 bp | AACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCGAAGGAGGCTGGCCTTaGCCACCTCCTCTTCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: NHTEVANPTLKPNTGAKLEGGWP*PPPLLL Trigger: CAATAGAAGAGGAGGTGGGCAAGGCCAGCCTCCTTC...GAGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGAACCATCTAGGTCAACTTTTCATACACAGCAGGTGTTCAAACATGCTGACACTGAAGGAGGCTaGCCTTGCCCACCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQEPSRSTFHTQQVFKHADTEGG*PCPPPL Trigger: AAGAGGAGGTGGGCAAGGCCAGCCTCCTTCAGTGTC...AGCATGTTTGAACACCTGCTGTGTATGAAAAGTTGACCTAGATGGTTCCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | CATGACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCTGTGCCCTCTCTCAATaGGGCACTGAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HDFNDAQRRIHDLALKQFCALSQ*GTERAG Trigger: ACCAGCTCTCTCAGTGCCTCATTGAGAGAGGGCACA...GAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCGACACTGAAGGAGGCTaGCCTTGCCCACCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FATTKVNHTEVANPTLKPDTEGG*PCPPPL Trigger: AAGAGGAGGTGGGCAAGGCCAGCCTCCTTCAGTGTC...GGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | GAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTAGTCCAGGCTCTCCTTaGCCCAGTAGCATCTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPYRGSKSNSKAQHRSKTSPGSP*PSSIYC Trigger: GCAATAGATGCTACTGGGCCAAGGAGAGCCTGGACT...AGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCGAAGGAGGCTGGCCTTaGCCACCTCCTCTTCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: FCNNKSEPYRGSKSNSKAEGGWP*PPPLLL Trigger: CAATAGAAGAGGAGGTGGGCAAGGCCAGCCTCCTTC...GGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR GCA 90 bp | TCATACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAAAAGCTCCCAAAAGCTaGACCCTGTCATGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYTAGVQTCWQPIDGLAQKAPKS*TLSCSW Trigger: CCAACTACATGACAGGGTGCAGCTTTTGGGAGCTTT...TTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 |
||
| CDS-3UTR GCA 90 bp | CATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCCTTAAAGCTCCCAAAAGCTaGACCCTGTCATGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTEVANPTLKPNTGAKLLKAPKS*TLSCSW Trigger: CCAACTACATGACAGGGTGCAGCTTTTGGGAGCTTT...AAGGAGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGGACACTGAAGGAGGCTaGCCTTGCCCACCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFATTKVNHTEVANPTLKDTEGG*PCPPPL Trigger: AAGAGGAGGTGGGCAAGGCCAGCCTCCTTCAGTGTC...CTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCCTGCAAACCACAACTaGCAGCTTCCACGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCNNKSEPYRGSKSNSKAPANHN*QLPRWP Trigger: TGGCCATCGTGGAAGCTGCCAGTTGTGGTTTGCAGG...GGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | ACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAAGTCCAGGCTCTCCTTaGCCCAGTAGCATCTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTKVNHTEVANPTLKPNTSPGSP*PSSIYC Trigger: GCAATAGATGCTACTGGGCCAAGGAGAGCCTGGACT...TGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAGGGCTCTTCCTAAGAGAATGCATATACATAGAACAGGTCAGAAAAAAGGGAATGGTCTGTaGAGACTGTCTGAAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RERRALPKRMHIHRTGQKKGNGL*RLSEAP Trigger: TGGGGCTTCAGACAGTCTTCACAGACCATTCCCTTT...TTTCTGACCTGTTCTATGTATATGCATTCTCTTAGGAAGAGCCCTTCTCTCTCT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGATTCAGTGCTGCTCTaGGTACAGTGTTCTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TKVNHTEVANPTLKPNTGDSVLL*VQCSPY Trigger: GTAAGGAGAACACTGTACTCAGAGCAGCACTGAATC...TCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | GACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCACAGATTCAGTGCTGCTCTaGGTACAGTGTTCTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: DFNDAQRRIHDLALKQFTDSVLL*VQCSPY Trigger: GTAAGGAGAACACTGTACTCAGAGCAGCACTGAATC...TGTGAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTGACACTGAAGGAGGCTaGCCTTGCCCACCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFCNNKSEPYRGSKSNSDTEGG*PCPPPL Trigger: AAGAGGAGGTGGGCAAGGCCAGCCTCCTTCAGTGTC...AGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | GAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTGTCGTGGCTGTAGATTaGTTGTACATGACTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPYRGSKSNSKAQHRSKTVVAVD*LYMTLR Trigger: TCTGAGAGTCATGTACAACCAATCTACAGCCACGAC...AGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCTGCAAACCACAACTaGCAGCTTCCACGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFATTKVNHTEVANPTLKPANHN*QLPRWP Trigger: TGGCCATCGTGGAAGCTGCCAGTTGTGGTTTGCAGG...CTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCATGTGCCCTCTCTCAATaGGGCACTGAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVYLFATTKVNHTEVANPCALSQ*GTERAG Trigger: ACCAGCTCTCTCAGTGCCTCATTGAGAGAGGGCACA...TGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAAACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | CCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTTCACAGGGCCACAGTGTaGGATGAGCCTGTCCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PNTNISLLYRWQPSNRHVHRATV*DEPVQS Trigger: AGATTGGACAGGCTCATCTCACACTGTGGCCCTGTG...AACATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 |
||
| CDS-3UTR GCA 90 bp | GTTTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTGAAGGAGGCTGGCCTTaGCCACCTCCTCTTCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VYLFATTKVNHTEVANPTEGGWP*PPPLLL Trigger: CAATAGAAGAGGAGGTGGGCAAGGCCAGCCTCCTTC...AGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | GACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCACAACCATGCATATATTATaGGTGCAGGTCCTATCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DFNDAQRRIHDLALKQFTTMHIL*VQVLSS Trigger: CGACGATAGGACCTGCACCCATAATATATGCATGGT...TGTGAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGTCGTGGCTGTAGATTaGTTGTACATGACTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKVNHTEVANPTLKPNTGVVAVD*LYMTLR Trigger: TCTGAGAGTCATGTACAACCAATCTACAGCCACGAC...TCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGATTGTGGATATTTTCTaGAGCTGGCAATGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NKSEPYRGSKSNSKAQHRIVDIF*SWQCPR Trigger: TCGGGGACATTGCCAGCTCCAGAAAATATCCACAAT...CCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | GAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTGTCTTCACTACATTGTaGATATTTTCTGGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPYRGSKSNSKAQHRSKTVFTTL*IFSGAG Trigger: GCCAGCTCCAGAAAATATCCACAATGTAGTGAAGAC...AGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | AACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCATCAATGAAAGAGTCTaGAGTCATCCACTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHTEVANPTLKPNTGAKLINERV*SHPLQE Trigger: TTCCTGCAGTGGATGACTCCAGACTCTTTCATTGAT...GAGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGAGTCCAGGCTCTCCTTaGCCCAGTAGCATCTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFATTKVNHTEVANPTLKSPGSP*PSSIYC Trigger: GCAATAGATGCTACTGGGCCAAGGAGAGCCTGGACT...CTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | GAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCAATCTCTTGTGCATTaGCAAAACAGTTTCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EPYRGSKSNSKAQHRSKTQSLVH*QNSFLR Trigger: TCGAAGGAAACTGTTTTGCCAATGCACAAGAGATTG...AGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | AACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCCAATCTCTTGTGCATTaGCAAAACAGTTTCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NHTEVANPTLKPNTGAKLQSLVH*QNSFLR Trigger: TCGAAGGAAACTGTTTTGCCAATGCACAAGAGATTG...GAGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | AACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGATCAATGAAAGAGTCTaGAGTCATCCACTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NKSEPYRGSKSNSKAQHRINERV*SHPLQE Trigger: TTCCTGCAGTGGATGACTCCAGACTCTTTCATTGAT...CCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR TCA 90 bp | GAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTTGTAAGAGACACAAATaGTGTGGTTTGTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPYRGSKSNSKAQHRSKTCKRHK*CGLCHK Trigger: TTTGTGACACAAACCACATCATTTGTGTCTCTTACA...AGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | TACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGAAACACAAAGATTTTACTaGAGGCTCGCAGAGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: YTAGVQTCWQPIDGLAQETQRFY*RLAENN Trigger: ATTATTCTCTGCGAGCCTTCAGTAAAATCTTTGTGT...TTCTTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 |
||
| CDS-3UTR GCA 90 bp | GACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCACATATTTCAGGATTCAGTaGTGCTCTGAGTACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DFNDAQRRIHDLALKQFTYFRIQ*CSEYSV Trigger: AACACTGTACTCAGAGCAGCACTGAATCCTGAAATA...TGTGAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCGTCGTGGCTGTAGATTaGTTGTACATGACTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCNNKSEPYRGSKSNSKAVVAVD*LYMTLR Trigger: TCTGAGAGTCATGTACAACCAATCTACAGCCACGAC...GGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CCA 90 bp | ACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGTCTTCACTACATTGTaGATATTTTCTGGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTKVNHTEVANPTLKPNTVFTTL*IFSGAG Trigger: GCCAGCTCCAGAAAATATCCACAATGTAGTGAAGAC...TGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTCTCAGCGCATAAAGATTTAAATAAGACTGAACGGTTTGGACAAGGTCATATCAATGAAAGAGTCTaGAGTCATCCACTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSAHKDLNKTERFGQGHINERV*SHPLQE Trigger: TTCCTGCAGTGGATGACTCCAGACTCTTTCATTGAT...ATGACCTTGTCCAAACCGTTCAGTCTTATTTAAATCTTTATGCGCTGAGACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 |
||
| CDS-3UTR TCA 90 bp | CATGACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCTGTAAGAGACACAAATaGTGTGGTTTGTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HDFNDAQRRIHDLALKQFCKRHK*CGLCHK Trigger: TTTGTGACACAAACCACATCATTTGTGTCTCTTACA...GAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR GCA 90 bp | GTTTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTACAGTTATGACCTTGTaGCCTCTCTCAATGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYLFATTKVNHTEVANPTTVMTL*PLSMRH Trigger: GTGCCTCATTGAGAGAGGGCACAAGGTCATAACTGT...AGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTTTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAAAAGCTCCCAAAAGCTaGACCCTGTCATGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVYLFATTKVNHTEVANPKAPKS*TLSCSW Trigger: CCAACTACATGACAGGGTGCAGCTTTTGGGAGCTTT...TGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAAACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGGTCGTGGCTGTAGATTaGTTGTACATGACTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFATTKVNHTEVANPTLKVVAVD*LYMTLR Trigger: TCTGAGAGTCATGTACAACCAATCTACAGCCACGAC...CTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| 3UTR CAA 72 bp | CAGGACTATTGCAAGTATCTAATAGGACTTGTTAACTaGGGCTTGCTTCTACCTGCTTTGGGATATCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: QDYCKYLIGLVN*GLLLPALGYLI Trigger: GATAAGATATCCCAAAGCAGGTAGAAGCAAGCCCAAGTTAACAAGTCCTATTAGATACTTGCAATAGTCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCTGTAAGAGACACAAATaGTGTGGTTTGTGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FATTKVNHTEVANPTLKPCKRHK*CGLCHK Trigger: TTTGTGACACAAACCACATCATTTGTGTCTCTTACA...GGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | CCTGTCTCAGCGCATAAAGATTTAAATAAGACTGAACGGTTTGGACAAGGTCATACACAAAGATTTTACTaGAGGCTCGCAGAGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSAHKDLNKTERFGQGHTQRFY*RLAENN Trigger: ATTATTCTCTGCGAGCCTTCAGTAAAATCTTTGTGT...ATGACCTTGTCCAAACCGTTCAGTCTTATTTAAATCTTTATGCGCTGAGACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAATTGTGGATATTTTCTaGAGCTGGCAATGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SVYLFATTKVNHTEVANPIVDIF*SWQCPR Trigger: TCGGGGACATTGCCAGCTCCAGAAAATATCCACAAT...TGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAAACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CCA 90 bp | TTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTATTGTGGATATTTTCTaGAGCTGGCAATGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFCNNKSEPYRGSKSNSIVDIF*SWQCPR Trigger: TCGGGGACATTGCCAGCTCCAGAAAATATCCACAAT...AGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| 3UTR CAA 72 bp | TTTTCTTTTGTTCGGGAACCATTACAACATCAAAGGTaGGGCAGCATTTATAGCCACTCTATCCATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFVREPLQHQR*GSIYSHSIHFS Trigger: AGAGAAATGGATAGAGTGGCTATAAATGCTGCCCAACCTTTGATGTTGTAATGGTTCCCGAACAAAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
||
| CDS-3UTR TCA 90 bp | TTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCACACAAAGATTTTACTaGAGGCTCGCAGAGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCNNKSEPYRGSKSNSKATQRFY*RLAENN Trigger: ATTATTCTCTGCGAGCCTTCAGTAAAATCTTTGTGT...GGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGGCTGTCAATGCAAATTaGGCTACTATGTCATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LFATTKVNHTEVANPTLKAVNAN*ATMSLP Trigger: AGGTAATGACATAGTAGCTCAATTTGCATTGACAGC...CTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151911.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTTATTTCAGGATTCAGTaGTGCTCTGAGTACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFCNNKSEPYRGSKSNSYFRIQ*CSEYSV Trigger: AACACTGTACTCAGAGCAGCACTGAATCCTGAAATA...AGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACACAAATATATCTCTTTTATATCGGTGGCAACCAAGTAATAGGCATGTTTATTTCAGGATTCAGTaGTGCTCTGAGTACAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNTNISLLYRWQPSNRHVYFRIQ*CSEYSV Trigger: AACACTGTACTCAGAGCAGCACTGAATCCTGAAATA...AACATGCCTATTACTTGGTTGCCACCGATATAAAAGAGATATATTTGTGTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000151911.9 |
||
| CDS-3UTR CAA 90 bp | GAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTGTGGCTGTAGATTGGTaGTACATGACTCTCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPYRGSKSNSKAQHRSKTVAVDW*YMTLRG Trigger: GCCTCTGAGAGTCATGTACAACCAATCTACAGCCAC...AGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CAA 90 bp | TCATACACAGCAGGTGTTCAAACATGCTGGCAACCAATAGATGGTCTTGCTCAAGTGGCTGTAGATTGGTaGTACATGACTCTCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SYTAGVQTCWQPIDGLAQVAVDW*YMTLRG Trigger: GCCTCTGAGAGTCATGTACAACCAATCTACAGCCAC...TTGAGCAAGACCATCTATTGGTTGCCAGCATGTTTGAACACCTGCTGTGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CAA 90 bp | GACTTCAATGATGCCCAGAGAAGGATACATGACCTTGCCTTAAAACAGTTCACAGTGGCTGTAGATTGGTaGTACATGACTCTCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DFNDAQRRIHDLALKQFTVAVDW*YMTLRG Trigger: GCCTCTGAGAGTCATGTACAACCAATCTACAGCCAC...TGTGAACTGTTTTAAGGCAAGGTCATGTATCCTTCTCTGGGCATCATTGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGAACCATCTAGGTCAACTTTTCATACACAGCAGGTGTTCAAACATGCTAGTCGTGGCTGTAGATaGGTTGTACATGACTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQEPSRSTFHTQQVFKHASRGCR*VVHDSQ Trigger: CTGAGAGTCATGTACAACCAATCTACAGCCACGACT...AGCATGTTTGAACACCTGCTGTGTATGAAAAGTTGACCTAGATGGTTCCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
||
| CDS-3UTR CAA 90 bp | CATACAGAGGTAGCAAATCCAACTCTAAAGCCCAACACAGGAGCAAAACTCCTTCCAATCTCTTGTGCATaGGCAAAACAGTTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: HTEVANPTLKPNTGAKLLPISCA*AKQFPS Trigger: CGAAGGAAACTGTTTTGCCAATGCACAAGAGATTGG...AAGGAGTTTTGCTCCTGTGTTGGGCTTTAGAGTTGGATTTGCTACCTCTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGGTGGCTGTAGATTGGTaGTACATGACTCTCAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LFATTKVNHTEVANPTLKVAVDW*YMTLRG Trigger: GCCTCTGAGAGTCATGTACAACCAATCTACAGCCAC...CTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000112257.10 ENSMUST00000151911.9 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTAAAGCCAATCTCTTGTGCATaGGCAAAACAGTTTCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LFATTKVNHTEVANPTLKPISCA*AKQFPS Trigger: CGAAGGAAACTGTTTTGCCAATGCACAAGAGATTGG...CTTTAGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
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| CDS-3UTR CAA 90 bp | TTATCTTTTTGCAACAACAAAAGTGAACCATACAGAGGTAGCAAATCCAACTCTCCAATCTCTTGTGCATaGGCAAAACAGTTTCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LSFCNNKSEPYRGSKSNSPISCA*AKQFPS Trigger: CGAAGGAAACTGTTTTGCCAATGCACAAGAGATTGG...AGAGTTGGATTTGCTACCTCTGTATGGTTCACTTTTGTTGTTGCAAAAAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033754.15 ENSMUST00000112255.8 ENSMUST00000208697.2 |
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