RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PICALM (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039361

Ensembl transcript IDs: ENSMUST00000049537.9, ENSMUST00000207084.2, ENSMUST00000207225.2, ENSMUST00000207484.2, ENSMUST00000208089.3, ENSMUST00000208730.2, ENSMUST00000208742.2, ENSMUST00000209068.2

Found 617 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTTGTTGGCCAAAGGGGTCCCAAGGGATCAACAACCCAGGCTGTTaGCCAGATTATAGGTTGATTTCCCAACTGTTGGCAAGGCTCCAC +
Preference number: 1 (lower is better)
Translates to: SCWPKGSQGINNPGC*PDYRLISQLLARLH
Trigger: GTGGAGCCTTGCCAACAGTTGGGAAATCAACCTATAATCTGGGCAACAGCCTGGGTTGTTGATCCCTTGGGACCCCTTTGGCCAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 90 bp TGCTTACCATTCTCTGCTTCAGTGAAGTCCTTAATGCCTCTCCCCTaGTTCTCCTTCAGTCCTGATGGCTCACTCTTGGGTTCCGTGTAC +
Preference number: 1 (lower is better)
Translates to: CLPFSASVKSLMPLP*FSFSPDGSLLGSVY
Trigger: GTACACGGAACCCAAGAGTGAGCCATCAGGACTGAAGGAGAACCAGGGGAGAGGCATTAAGGACTTCACTGAAGCAGAGAATGGTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 90 bp ATTCAGACCTCAGCATCCACTGAGCTCCTGCAGCTAGCTAGCTTATaGTGTGCTGGCCTTACTGGCAACCTTGATGCTTGTCGGAAAAGA +
Preference number: 1 (lower is better)
Translates to: IQTSASTELLQLASL*CAGLTGNLDACRKR
Trigger: TCTTTTCCGACAAGCATCAAGGTTGCCAGTAAGGCCAGCACACCATAAGCTAGCTAGCTGCAGGAGCTCAGTGGATGCTGAGGTCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 90 bp CAGTCTAGACTGCAGGGGTATGATGCCCATTCAGTTGTGAATGAATaGCAGACAGCAAGCCAAGGAACCATGCCACTGTCTAGCCACCTA +
Preference number: 1 (lower is better)
Translates to: QSRLQGYDAHSVVNE*QTASQGTMPLSSHL
Trigger: TAGGTGGCTAGACAGTGGCATGGTTCCTTGGCTTGCTGTCTGTCATTCATTCACAACTGAATGGGCATCATACCCCTGCAGTCTAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 90 bp CAAATGCCACCATGCTCAGCTGGTAGCAGCACTTCTTCCCTTGAGTaGCTTCTCAAACACTCATCTCTGAGGTACATTGCCAACGTTGCC +
Preference number: 1 (lower is better)
Translates to: QMPPCSAGSSTSSLE*LLKHSSLRYIANVA
Trigger: GGCAACGTTGGCAATGTACCTCAGAGATGAGTGTTTGAGAAGTCACTCAAGGGAAGAAGTGCTGCTACCAGCTGAGCATGGTGGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 90 bp TTGTTTTTCCAGCTCAGGAAGAAGTCCAAGTCTCTGCTTAAGTCCTaGTCCATTCAGACCTCAGCATCCACTGAGCTCCTGCAGCTAGCT +
Preference number: 1 (lower is better)
Translates to: LFFQLRKKSKSLLKS*SIQTSASTELLQLA
Trigger: AGCTAGCTGCAGGAGCTCAGTGGATGCTGAGGTCTGAATGGACCAGGACTTAAGCAGAGACTTGGACTTCTTCCTGAGCTGGAAAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 90 bp ACTGCTGAAGACAACACCTACACAACTCACAGAACATGGAGAAGTTaGGCTGGTGCCTACACAGAGCCTTCACCCTATAGTCTAGGTCTT +
Preference number: 1 (lower is better)
Translates to: TAEDNTYTTHRTWRS*AGAYTEPSPYSLGL
Trigger: AAGACCTAGACTATAGGGTGAAGGCTCTGTGTAGGCACCAGCTCAACTTCTCCATGTTCTGTGAGTTGTGTAGGTGTTGTCTTCAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 90 bp CTCCCTATCAACTCTGTCAGACTTAAGGGAAAGCAGCAGGAAATGTaGTTCACAGAAGATCCTCAGGGAGTCAAAAGTGGCCAACAGTCT +
Preference number: 1 (lower is better)
Translates to: LPINSVRLKGKQQEM*FTEDPQGVKSGQQS
Trigger: AGACTGTTGGCCACTTTTGACTCCCTGAGGATCTTCTGTGAAGCACATTTCCTGCTGCTTTCCCTTAAGTCTGACAGAGTTGATAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 90 bp CCAGATTATAGGTTGATTTCCCAACTGTTGGCAAGGCTCCACTGCTaGAGACAACACCTACACAACTCACAGAACATGGAGAAGTTGAGC +
Preference number: 1 (lower is better)
Translates to: PDYRLISQLLARLHC*RQHLHNSQNMEKLS
Trigger: GCTCAACTTCTCCATGTTCTGTGAGTTGTGTAGGTGTTGTCTTCAGCAGTGGAGCCTTGCCAACAGTTGGGAAATCAACCTATAATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 90 bp AAACTTCATTGGCCAGCCTGTACACTGGTTGTCCCTGACCAAACTTaGTTCTCAACTAAGTATACCTCCATGTTTTCCTTTCTCAAACCT +
Preference number: 1 (lower is better)
Translates to: KLHWPACTLVVPDQT*FSTKYTSMFSFLKP
Trigger: AGGTTTGAGAAAGGAAAACATGGAGGTATACTTAGTTGAGAACCAAGTTTGGTCAGGGACAACCAGTGTACAGGCTGGCCAATGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 90 bp TGTTCAACATCCTCAGTCATCAGGAAAATGCAAGTCAAGACAACTTaGAGAGTTCATCTTACACCTGCCAGAATGGCTATGAACAACAAA +
Preference number: 1 (lower is better)
Translates to: CSTSSVIRKMQVKTT*RVHLTPARMAMNNK
Trigger: TTTGTTGTTCATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAGTTGTCTTGACTTGCATTTTCCTGATGACTGAGGATGTTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 90 bp ACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATaGCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCT +
Preference number: 1 (lower is better)
Translates to: TFIWKGPNVKWKITT*QAQSSKDPSQCTNA
Trigger: AGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR TCA 90 bp ACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTaGTTATGGGTATTAATAGGAGTTGAAAGAACTGAAGTGTTAGTC +
Preference number: 1 (lower is better)
Translates to: TNSTLSKYGLFLVGY*LWVLIGVERTEVLV
Trigger: GACTAACACTTCAGTTCTTTCAACTCCTATTAATACCCATAATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR TCA 90 bp TCAAGGGAGAGAAAATGGGTTAACCTCAATAGAAGACCCAAGAATTaGGACTTGAGAAAGGTCACAATTATGGAAAAGATCAAACATTTG +
Preference number: 1 (lower is better)
Translates to: SRERKWVNLNRRPKN*DLRKVTIMEKIKHL
Trigger: CAAATGTTTGATCTTTTCCATAATTGTGACCTTTCTCAAGTCTCAATTCTTGGGTCTTCTATTGAGGTTAACCCATTTTCTCTCCCTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CAA 90 bp TTGTCACCTTCCAGTACTAGGATTGGGTTACATTTAATTGAGTTGTaGGCCAAAGGGGTCCCAAGGGATCAACAACCCAGGCTGTTGCCC +
Preference number: 2 (lower is better)
Translates to: LSPSSTRIGLHLIEL*AKGVPRDQQPRLLP
Trigger: GGGCAACAGCCTGGGTTGTTGATCCCTTGGGACCCCTTTGGCCAACAACTCAATTAAATGTAACCCAATCCTAGTACTGGAAGGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR TCA 90 bp TGGGCAAACCCACTCATGAGAAGGAACCCATACCCAACACTCCTGTGTGGTCACGCTTTTCCTAGTCAGTaGACTGTTCCCTTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: WANPLMRRNPYPTLLCGHAFPSQ*TVPLQN
Trigger: ATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGC...GTGACCACACAGGAGTGTTGGGTATGGGTTCCTTCTCATGAGTGGGTTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR TCA 90 bp TGGGCAAACCCACTCATGAGAAGGAACCCATACCCAACACTCCTGTGTGGTCACAAAGAAGGACAGTCTTaGAGTGAAAGCAACTCCTCA +
Preference number: 2 (lower is better)
Translates to: WANPLMRRNPYPTLLCGHKEGQS*SESNSS
Trigger: TGAGGAGTTGCTTTCACTTCAAGACTGTCCTTCTTT...GTGACCACACAGGAGTGTTGGGTATGGGTTCCTTCTCATGAGTGGGTTTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR TCA 90 bp TGGGCAAACCCACTCATGAGAAGGAACCCATACCCAACACTCCTGTGTGGTCACGCAGTATACAGCTTTTaGTCTCTCTTTGATGCACTC +
Preference number: 2 (lower is better)
Translates to: WANPLMRRNPYPTLLCGHAVYSF*SLFDAL
Trigger: GAGTGCATCAAAGAGAGATCAAAAGCTGTATACTGC...GTGACCACACAGGAGTGTTGGGTATGGGTTCCTTCTCATGAGTGGGTTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR GCA 90 bp AAGAGGCACACTCATGCATTGTTGCTGGGAGCGCAAACTTGTGGTCAGTGTGGTAAGCAGCAGGAAATGTaGTTCACAGAAGATCCTCAG +
Preference number: 2 (lower is better)
Translates to: KRHTHALLLGAQTCGQCGKQQEM*FTEDPQ
Trigger: CTGAGGATCTTCTGTGAAGCACATTTCCTGCTGCTT...ACCACACTGACCACAAGTTTGCGCTCCCAGCAACAATGCATGAGTGTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CAA 90 bp GTGTGTCACTGTGGATGTGGGCTTAAGAGCCTCATCCTAGCTGCTTaGTCTTCCACTAGCAGTCTTCAGATGGAAGATGTAGAACTGTTC +
Preference number: 2 (lower is better)
Translates to: VCHCGCGLKSLILAA*SSTSSLQMEDVELF
Trigger: GAACAGTTCTACATCTTCCATCTGAAGACTGCTAGTGGAAGACAAAGCAGCTAGGATGAGGCTCTTAAGCCCACATCCACAGTGACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR TCA 90 bp AAGAGGCACACTCATGCATTGTTGCTGGGAGCGCAAACTTGTGGTCAGTGTGGTATGCCCATTCAGTTGTaGATGAATGACAGACAGCAA +
Preference number: 2 (lower is better)
Translates to: KRHTHALLLGAQTCGQCGMPIQL*MNDRQQ
Trigger: TTGCTGTCTGTCATTCATTCACAACTGAATGGGCAT...ACCACACTGACCACAAGTTTGCGCTCCCAGCAACAATGCATGAGTGTGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CCA 90 bp TACACTGGAGTCCAACAGGGAAGTCACAAGATCTACAAGCTAGAACTAACCAAAGGGAGCGCAAACTTGTaGTCAGTGTGGTGGGAATGG +
Preference number: 2 (lower is better)
Translates to: YTGVQQGSHKIYKLELTKGSANL*SVWWEW
Trigger: CCATTCCCACCACACTGACCACAAGTTTGCGCTCCC...TTTGGTTAGTTCTAGCTTGTAGATCTTGTGACTTCCCTGTTGGACTCCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CAA 90 bp CTACCAAAGGAGAAATGTAAACACCAAGCCAGCCACACAAAACCTTaGTCATCTCCAATAGTGTCCTGCTTGCAAGATCTGCTAGGGCAA +
Preference number: 2 (lower is better)
Translates to: LPKEKCKHQASHTKP*SSPIVSCLQDLLGQ
Trigger: TTGCCCTAGCAGATCTTGCAAGCAGGACACTATTGGAGATGACAAAGGTTTTGTGTGGCTGGCTTGGTGTTTACATTTCTCCTTTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR GCA 90 bp CAAGTCAAGACAACTTGGAGAGTTCATCTTACACCTGCCAGAATGGCTATGAACCAACCACAAAGGCACTaGTCAGTTGTTCATTGCTGC +
Preference number: 2 (lower is better)
Translates to: QVKTTWRVHLTPARMAMNQPQRH*SVVHCC
Trigger: GCAGCAATGAACAACTGAGCAGTGCCTTTGTGGTTG...GTTCATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAGTTGTCTTGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGGCTTTTCCTAGTCAGTaGACTGTTCCCTTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEAFPSQ*TVPLQN
Trigger: ATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGC...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR TCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAAAGAAGGACAGTCTTaGAGTGAAAGCAACTCCTCA +
Preference number: 2 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINKEGQS*SESNSS
Trigger: TGAGGAGTTGCTTTCACTTCAAGACTGTCCTTCTTT...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCCCAATGAATCCTGTTaGTATGGTAAAGGACACAAC +
Preference number: 2 (lower is better)
Translates to: APLNPSDKMYLQKAPINSPNESC*YGKGHN
Trigger: GTTGTGTCCTTTACCATAGCAACAGGATTCATTGGG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACCCCAATGAATCCTGTTaGTATGGTAAAGGACACAAC +
Preference number: 2 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINPNESC*YGKGHN
Trigger: GTTGTGTCCTTTACCATAGCAACAGGATTCATTGGG...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR TCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAAAAGAAGGACAGTCTTaGAGTGAAAGCAACTCCTCA +
Preference number: 2 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAKEGQS*SESNSS
Trigger: TGAGGAGTTGCTTTCACTTCAAGACTGTCCTTCTTT...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR TCA 90 bp TACACTGGAGTCCAACAGGGAAGTCACAAGATCTACAAGCTAGAACTAACCAAAGCCCAGATTATAGGTTaGTTTCCCAACTGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: YTGVQQGSHKIYKLELTKAQIIG*FPNCWQ
Trigger: TTGCCAACAGTTGGGAAATCAACCTATAATCTGGGC...TTTGGTTAGTTCTAGCTTGTAGATCTTGTGACTTCCCTGTTGGACTCCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACCTCCTCACATTCATTTaGAAAGGCCCTAATGTCAAA +
Preference number: 2 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINLLTFI*KGPNVK
Trigger: TTTGACATTAGGGCCTTTCCAAATGAATGTGAGGAG...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCTCCTCACATTCATTTaGAAAGGCCCTAATGTCAAA +
Preference number: 2 (lower is better)
Translates to: APLNPSDKMYLQKAPINSLLTFI*KGPNVK
Trigger: TTTGACATTAGGGCCTTTCCAAATGAATGTGAGGAG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CAA 90 bp TTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATaGACTATAAGGATTAATGCATTTATAATGCGCCCTACATCCCAG +
Preference number: 2 (lower is better)
Translates to: FLVSELFPCKILGTG*TIRINAFIMRPTSQ
Trigger: CTGGGATGTAGGGCGCATTATAAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CAA 90 bp ATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGAATaGCTTTCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACC +
Preference number: 2 (lower is better)
Translates to: ICRDNATSMLNSCTE*LSYNELSFLRPLST
Trigger: GGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR TCA 90 bp TACAATGAAACAGATATTCCAGAACTGTATCAAGGGAGAGAAAATGGGTTAACCTCACCAATCAGTGTCTaGCTTGGGCAAACCCACTCA +
Preference number: 2 (lower is better)
Translates to: YNETDIPELYQGRENGLTSPISV*LGQTHS
Trigger: TGAGTGGGTTTGCCCAAGTCAGACACTGATTGGTGA...GGTTAACCCATTTTCTCTCCCTTGATACAGTTCTGGAATATCTGTTTCATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR GCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATCAGACCTATGGATTTaGCGTAAAGTATTTAGTGCT +
Preference number: 2 (lower is better)
Translates to: VVLFLVSELFPCKILGTGSDLWI*RKVFSA
Trigger: AGCACTAAATACTTTACGGCAAATCCATAGGTCTGA...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTCAGACCTATGGATTTaGCGTAAAGTATTTAGTGCT +
Preference number: 2 (lower is better)
Translates to: APLNPSDKMYLQKAPINSSDLWI*RKVFSA
Trigger: AGCACTAAATACTTTACGGCAAATCCATAGGTCTGA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp TCCCTGACCAAACTTGGTTCTCAACTAAGTATACCTCCATGTTTTCCTTTCTCAAGTGAACTGTTCCCTTaGAAAATCCTAGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: SLTKLGSQLSIPPCFPFSSELFP*KILGTG
Trigger: TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT...TGAGAAAGGAAAACATGGAGGTATACTTAGTTGAGAACCAAGTTTGGTCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR GCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTGGAAAATAACGACATaGCAAGCACAAAGCAGTAAA +
Preference number: 2 (lower is better)
Translates to: APLNPSDKMYLQKAPINSWKITT*QAQSSK
Trigger: TTTACTGCTTTGTGCTTGGCATGTCGTTATTTTCCA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACTGGAAAATAACGACATaGCAAGCACAAAGCAGTAAA +
Preference number: 2 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINWKITT*QAQSSK
Trigger: TTTACTGCTTTGTGCTTGGCATGTCGTTATTTTCCA...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAGGCCCTAATGTCAAATaGAAAATAACGACATGCCAA +
Preference number: 2 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAGPNVK*KITTCQ
Trigger: TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCC...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCACTCCTCACATTCATTTaGAAAGGCCCTAATGTCAAA +
Preference number: 2 (lower is better)
Translates to: PLNPSDKMYLQKAPINSALLTFI*KGPNVK
Trigger: TTTGACATTAGGGCCTTTCCAAATGAATGTGAGGAG...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR TCA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGGCTTTTCCTAGTCAGTaGACTGTTCCCTTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLAFPSQ*TVPLQN
Trigger: ATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGC...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208089.3
3UTR-3UTR TCA 90 bp CAAGTCAAGACAACTTGGAGAGTTCATCTTACACCTGCCAGAATGGCTATGAACATTCCTAATAGAAATTaGAAACCACCTAGATGTCCC +
Preference number: 2 (lower is better)
Translates to: QVKTTWRVHLTPARMAMNIPNRN*KPPRCP
Trigger: GGGACATCTAGGTGGTTTTCAATTTCTATTAGGAAT...GTTCATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAGTTGTCTTGACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR GCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAAGTGAACTGTTCCCTTaGAAAATCCTAGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQSELFP*KILGTG
Trigger: TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCATGGAAAATAACGACATaGCAAGCACAAAGCAGTAAA +
Preference number: 2 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAWKITT*QAQSSK
Trigger: TTTACTGCTTTGTGCTTGGCATGTCGTTATTTTCCA...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGAGATTCAGACCTATaGATTTGCCGTAAAGTATTT +
Preference number: 2 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINRDSDL*ICRKVF
Trigger: AAATACTTTACGGCAAATCCATAGGTCTGAATCTCT...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTACATGATCATAACATaGCACACGCCAAATAAAAAG +
Preference number: 2 (lower is better)
Translates to: APLNPSDKMYLQKAPINSYMIIT*HTPNKK
Trigger: CTTTTTATTTGGCGTGTGCCATGTTATGATCATGTA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTTACATGATCATAACATaGCACACGCCAAATAAAAAG +
Preference number: 2 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCYMIIT*HTPNKK
Trigger: CTTTTTATTTGGCGTGTGCCATGTTATGATCATGTA...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp ACCACCAACCCTTTCAGATGTTTACCTTCCTCTGCTTGTGTACATCTGGAAGCAAATATCCTCACACAATaGAACATCACTCAGATGTTT +
Preference number: 2 (lower is better)
Translates to: TTNPFRCLPSSACVHLEANILTQ*NITQMF
Trigger: AAACATCTGAGTGATGTTCCATTGTGTGAGGATATT...TGCTTCCAGATGTACACAAGCAGAGGAAGGTAAACATCTGAAAGGGTTGGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR TCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAGCTTTTCCTAGTCAGTaGACTGTTCCCTTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQAFPSQ*TVPLQN
Trigger: ATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGC...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAACCCAATGAATCCTGTTaGTATGGTAAAGGACACAAC +
Preference number: 2 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQPNESC*YGKGHN
Trigger: GTTGTGTCCTTTACCATAGCAACAGGATTCATTGGG...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCCCAATGAATCCTGTTaGTATGGTAAAGGACACAAC +
Preference number: 2 (lower is better)
Translates to: SELFPCKILGTGLTIRINPNESC*YGKGHN
Trigger: GTTGTGTCCTTTACCATAGCAACAGGATTCATTGGG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTAGAGATTCAGACCTATaGATTTGCCGTAAAGTATTT +
Preference number: 2 (lower is better)
Translates to: LFLVSELFPCKILGTGLTRDSDL*ICRKVF
Trigger: AAATACTTTACGGCAAATCCATAGGTCTGAATCTCT...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp AAGACAACTTGGAGAGTTCATCTTACACCTGCCAGAATGGCTATGAACAACAAAGGCCCTAATGTCAAATaGAAAATAACGACATGCCAA +
Preference number: 2 (lower is better)
Translates to: KTTWRVHLTPARMAMNNKGPNVK*KITTCQ
Trigger: TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCC...TTTGTTGTTCATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAGTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CCA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGCTCCTCACATTCATTTaGAAAGGCCCTAATGTCAAA +
Preference number: 2 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLLLTFI*KGPNVK
Trigger: TTTGACATTAGGGCCTTTCCAAATGAATGTGAGGAG...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208089.3
3UTR-3UTR GCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCTCAGACCTATGGATTTaGCGTAAAGTATTTAGTGCT +
Preference number: 2 (lower is better)
Translates to: LNVVLFLVSELFPCKILGSDLWI*RKVFSA
Trigger: AGCACTAAATACTTTACGGCAAATCCATAGGTCTGA...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR TCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGGCTTTTCCTAGTCAGTaGACTGTTCCCTTGCAAAAT +
Preference number: 2 (lower is better)
Translates to: TKIESAETMQQVCLTHVQAFPSQ*TVPLQN
Trigger: ATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGC...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR TCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGAAAGAAGGACAGTCTTaGAGTGAAAGCAACTCCTCA +
Preference number: 2 (lower is better)
Translates to: TKIESAETMQQVCLTHVQKEGQS*SESNSS
Trigger: TGAGGAGTTGCTTTCACTTCAAGACTGTCCTTCTTT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGCCCAATGAATCCTGTTaGTATGGTAAAGGACACAAC +
Preference number: 2 (lower is better)
Translates to: TKIESAETMQQVCLTHVQPNESC*YGKGHN
Trigger: GTTGTGTCCTTTACCATAGCAACAGGATTCATTGGG...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTTCAGACCTATGGATTTaGCGTAAAGTATTTAGTGCT +
Preference number: 2 (lower is better)
Translates to: LFPCKILGTGLTIRINAFSDLWI*RKVFSA
Trigger: AGCACTAAATACTTTACGGCAAATCCATAGGTCTGA...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGAGAGATTCAGACCTATaGATTTGCCGTAAAGTATTT +
Preference number: 2 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLRDSDL*ICRKVF
Trigger: AAATACTTTACGGCAAATCCATAGGTCTGAATCTCT...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208089.3
3UTR-3UTR CCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAAGAGATTCAGACCTATaGATTTGCCGTAAAGTATTT +
Preference number: 2 (lower is better)
Translates to: IYNAPYIPERLRILKRFRRDSDL*ICRKVF
Trigger: AAATACTTTACGGCAAATCCATAGGTCTGAATCTCT...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTAGAGATTCAGACCTATaGATTTGCCGTAAAGTATTT +
Preference number: 2 (lower is better)
Translates to: LFPCKILGTGLTIRINAFRDSDL*ICRKVF
Trigger: AAATACTTTACGGCAAATCCATAGGTCTGAATCTCT...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR GCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGTCAGACCTATGGATTTaGCGTAAAGTATTTAGTGCT +
Preference number: 2 (lower is better)
Translates to: TKIESAETMQQVCLTHVQSDLWI*RKVFSA
Trigger: AGCACTAAATACTTTACGGCAAATCCATAGGTCTGA...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CCA 72 bp GCCCAGGGAGTGGCACTATCAATAGGTGTGGCCTGTTaGAGTAGGTGTGTCACTGTGGATGTGGGCTTAAGA +
Preference number: 3 (lower is better)
Translates to: AQGVALSIGVAC*SRCVTVDVGLR
Trigger: TCTTAAGCCCACATCCACAGTGACACACCTACTCCAACAGGCCACACCTATTGATAGTGCCACTCCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 72 bp TCAGCATCCACTGAGCTCCTGCAGCTAGCTAGCTTATaGTGTGCTGGCCTTACTGGCAACCTTGATGCTTGT +
Preference number: 3 (lower is better)
Translates to: SASTELLQLASL*CAGLTGNLDAC
Trigger: ACAAGCATCAAGGTTGCCAGTAAGGCCAGCACACCATAAGCTAGCTAGCTGCAGGAGCTCAGTGGATGCTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 72 bp CAGCTCAGGAAGAAGTCCAAGTCTCTGCTTAAGTCCTaGTCCATTCAGACCTCAGCATCCACTGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: QLRKKSKSLLKS*SIQTSASTELL
Trigger: CAGGAGCTCAGTGGATGCTGAGGTCTGAATGGACCAGGACTTAAGCAGAGACTTGGACTTCTTCCTGAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 72 bp CCAAAGGGGTCCCAAGGGATCAACAACCCAGGCTGTTaGCCAGATTATAGGTTGATTTCCCAACTGTTGGCA +
Preference number: 3 (lower is better)
Translates to: PKGSQGINNPGC*PDYRLISQLLA
Trigger: TGCCAACAGTTGGGAAATCAACCTATAATCTGGGCAACAGCCTGGGTTGTTGATCCCTTGGGACCCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 72 bp CTGCAGGGGTATGATGCCCATTCAGTTGTGAATGAATaGCAGACAGCAAGCCAAGGAACCATGCCACTGTCT +
Preference number: 3 (lower is better)
Translates to: LQGYDAHSVVNE*QTASQGTMPLS
Trigger: AGACAGTGGCATGGTTCCTTGGCTTGCTGTCTGTCATTCATTCACAACTGAATGGGCATCATACCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 72 bp GGATCAACAACCCAGGCTGTTGCCCAGATTATAGGTTaGTTTCCCAACTGTTGGCAAGGCTCCACTGCTGAA +
Preference number: 3 (lower is better)
Translates to: GSTTQAVAQIIG*FPNCWQGSTAE
Trigger: TTCAGCAGTGGAGCCTTGCCAACAGTTGGGAAATCAACCTATAATCTGGGCAACAGCCTGGGTTGTTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 72 bp CCATGCTCAGCTGGTAGCAGCACTTCTTCCCTTGAGTaGCTTCTCAAACACTCATCTCTGAGGTACATTGCC +
Preference number: 3 (lower is better)
Translates to: PCSAGSSTSSLE*LLKHSSLRYIA
Trigger: GGCAATGTACCTCAGAGATGAGTGTTTGAGAAGTCACTCAAGGGAAGAAGTGCTGCTACCAGCTGAGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 72 bp GACCACCACCAACCCTTTCAGATGTTTACCTTCCTCTaGTTGTGTACATCTGGAAGCATTGTTCTCCCCACC +
Preference number: 3 (lower is better)
Translates to: DHHQPFQMFTFL*LCTSGSIVLPT
Trigger: GGTGGGGAGAACAATGCTTCCAGATGTACACAAGCAGAGGAAGGTAAACATCTGAAAGGGTTGGTGGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 72 bp ACAAAGCTTGTGGGAGTCACCAATCAGTGTCTGACTTaGGCAAACCCACTCATGAGAAGGAACCCATACCCA +
Preference number: 3 (lower is better)
Translates to: TKLVGVTNQCLT*ANPLMRRNPYP
Trigger: TGGGTATGGGTTCCTTCTCATGAGTGGGTTTGCCCAAGTCAGACACTGATTGGTGACTCCCACAAGCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 72 bp GACAACACCTACACAACTCACAGAACATGGAGAAGTTaGGCTGGTGCCTACACAGAGCCTTCACCCTATAGT +
Preference number: 3 (lower is better)
Translates to: DNTYTTHRTWRS*AGAYTEPSPYS
Trigger: ACTATAGGGTGAAGGCTCTGTGTAGGCACCAGCTCAACTTCTCCATGTTCTGTGAGTTGTGTAGGTGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 72 bp AGGTTGATTTCCCAACTGTTGGCAAGGCTCCACTGCTaGAGACAACACCTACACAACTCACAGAACATGGAG +
Preference number: 3 (lower is better)
Translates to: RLISQLLARLHC*RQHLHNSQNME
Trigger: CTCCATGTTCTGTGAGTTGTGTAGGTGTTGTCTTCAGCAGTGGAGCCTTGCCAACAGTTGGGAAATCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 72 bp GCCAGAATGGCTATGAACAACAAAAGTGACAGCCCATaGTGGCAAGGATACAGAGTAAGAGGCACACTCATG +
Preference number: 3 (lower is better)
Translates to: ARMAMNNKSDSP*WQGYRVRGTLM
Trigger: CATGAGTGTGCCTCTTACTCTGTATCCTTGCCAGCATGGGCTGTCACTTTTGTTGTTCATAGCCATTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTTGCCGCCTGTGCACTaGTATTCTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: APLNPSDKMYLQKAPINSLPPVH*YSWSNS
Trigger: GGAATTACTCCAAGAATACAAGTGCACAGGCGGCAA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGTTGCCGCCTGTGCACTaGTATTCTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: LERSNGGRVSETAVSILLLPPVH*YSWSNS
Trigger: GGAATTACTCCAAGAATACAAGTGCACAGGCGGCAA...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTGCCGCCTGTGCACTaGTATTCTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAELPPVH*YSWSNS
Trigger: GGAATTACTCCAAGAATACAAGTGCACAGGCGGCAA...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR TCA 72 bp TCTTACACCTGCCAGAATGGCTATGAACAACAAAAGTaGCAGCCCATGCTGGCAAGGATACAGAGTAAGAGG +
Preference number: 3 (lower is better)
Translates to: SYTCQNGYEQQK*QPMLARIQSKR
Trigger: CCTCTTACTCTGTATCCTTGCCAGCATGGGCTGTCACTTTTGTTGTTCATAGCCATTCTGGCAGGTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 72 bp CTTGGAGAGTTCATCTTACACCTGCCAGAATGGCTATaGACAACAAAAGTGACAGCCCATGCTGGCAAGGAT +
Preference number: 3 (lower is better)
Translates to: LGEFILHLPEWL*TTKVTAHAGKD
Trigger: ATCCTTGCCAGCATGGGCTGTCACTTTTGTTGTTCATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR TCA 72 bp CCAACTCTCGAGAGTGCTAGGAATCAAACTGACTCCTaGCTCTACTCTTCTGCAGAGCAGTATGTGCTTGTA +
Preference number: 3 (lower is better)
Translates to: PTLESARNQTDS*LYSSAEQYVLV
Trigger: TACAAGCACATACTGCTCTGCAGAAGAGTAGAGTCAGGAGTCAGTTTGATTCCTAGCACTCTCGAGAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 72 bp TGTGGTGGGAATGGGTGTGGTAGCTCTTCAGGAAGATaGGAATCAATCTACCTCAAGATCCAGCTCTATAAG +
Preference number: 3 (lower is better)
Translates to: CGGNGCGSSSGR*ESIYLKIQLYK
Trigger: CTTATAGAGCTGGATCTTGAGGTAGATTGATTCCCATCTTCCTGAAGAGCTACCACACCCATTCCCACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CAA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAACAGCAGTTTCAATTTaGCTGGAAGTAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: SPNESCCYGKGHNSSLQATAVSI*LEVRSC
Trigger: GCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGT...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR GCA 72 bp TTTTGTTTTTCCAGCTCAGGAAGAAGTCCAAGTCTCTaGTTAAGTCCTGGTCCATTCAGACCTCAGCATCCA +
Preference number: 3 (lower is better)
Translates to: FCFSSSGRSPSL*LSPGPFRPQHP
Trigger: TGGATGCTGAGGTCTGAATGGACCAGGACTTAAGCAGAGACTTGGACTTCTTCCTGAGCTGGAAAAACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CCA 72 bp TGGCCAGCCTGTACACTGGTTGTCCCTGACCAAACTTaGTTCTCAACTAAGTATACCTCCATGTTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: WPACTLVVPDQT*FSTKYTSMFSF
Trigger: AAAGGAAAACATGGAGGTATACTTAGTTGAGAACCAAGTTTGGTCAGGGACAACCAGTGTACAGGCTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CAA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAACAGCAGTTTCAATTTaGCTGGAAGTAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: VVLFLVSELFPCKILGTGTAVSI*LEVRSC
Trigger: GCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGT...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTACAGCAGTTTCAATTTaGCTGGAAGTAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCTAVSI*LEVRSC
Trigger: GCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGT...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTACAGCAGTTTCAATTTaGCTGGAAGTAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: APLNPSDKMYLQKAPINSTAVSI*LEVRSC
Trigger: GCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGT...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR GCA 72 bp GAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTaGCGCCTGTGCACTTGTATTCTTGGAGTAATTCCA +
Preference number: 3 (lower is better)
Translates to: ETAVSILLEVRS*RLCTCILGVIP
Trigger: TGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CCA 72 bp TCCTCAGTCATCAGGAAAATGCAAGTCAAGACAACTTaGAGAGTTCATCTTACACCTGCCAGAATGGCTATG +
Preference number: 3 (lower is better)
Translates to: SSVIRKMQVKTT*RVHLTPARMAM
Trigger: CATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAGTTGTCTTGACTTGCATTTTCCTGATGACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CAA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTTTGCCGCCTGTGCACTaGTATTCTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLILPPVH*YSWSNS
Trigger: GGAATTACTCCAAGAATACAAGTGCACAGGCGGCAA...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTACAGCAGTTTCAATTTaGCTGGAAGTAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: LFLVSELFPCKILGTGLTTAVSI*LEVRSC
Trigger: GCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGT...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGATCCTAGGCACAGGATaGACTATAAGGATTAATGCA +
Preference number: 3 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEILGTG*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATCCTGTGCCTAGGAT...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACATCCTAGGCACAGGATaGACTATAAGGATTAATGCA +
Preference number: 3 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINILGTG*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATCCTGTGCCTAGGAT...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR GCA 72 bp TGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATaGCAAGCACAAAGCAGTAAAGATCCTTCCCAATGC +
Preference number: 3 (lower is better)
Translates to: WKGPNVKWKITT*QAQSSKDPSQC
Trigger: GCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATTTGCCGCCTGTGCACTaGTATTCTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: SELFPCKILGTGLTIRINLPPVH*YSWSNS
Trigger: GGAATTACTCCAAGAATACAAGTGCACAGGCGGCAA...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp TACAATGAAACAGATATTCCAGAACTGTATCAAGGGAGAGAAAATGGGTTAACCCCAATAGTGTCCTGCTaGCAAGATCTGCTAGGGCAA +
Preference number: 3 (lower is better)
Translates to: YNETDIPELYQGRENGLTPIVSC*QDLLGQ
Trigger: TTGCCCTAGCAGATCTTGCAAGCAGGACACTATTGG...GGTTAACCCATTTTCTCTCCCTTGATACAGTTCTGGAATATCTGTTTCATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CAA 90 bp TACAATGAAACAGATATTCCAGAACTGTATCAAGGGAGAGAAAATGGGTTAACCCACACTCATGCATTGTaGCTGGGAGCGCAAACTTGT +
Preference number: 3 (lower is better)
Translates to: YNETDIPELYQGRENGLTHTHAL*LGAQTC
Trigger: ACAAGTTTGCGCTCCCAGCAACAATGCATGAGTGTG...GGTTAACCCATTTTCTCTCCCTTGATACAGTTCTGGAATATCTGTTTCATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 72 bp CATTCAAAAGGACACTTCATCCAACCACAAAGGCACTaGTCAGTTGTTCATTGCTGCTCTATTCCTAATAGA +
Preference number: 3 (lower is better)
Translates to: HSKGHFIQPQRH*SVVHCCSIPNR
Trigger: TCTATTAGGAATAGAGCAGCAATGAACAACTGAGCAGTGCCTTTGTGGTTGGATGAAGTGTCCTTTTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CAA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAACAGCAGTTTCAATTTaGCTGGAAGTAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQTAVSI*LEVRSC
Trigger: GCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp AAGACAACTTGGAGAGTTCATCTTACACCTGCCAGAATGGCTATGAACAACAAAATCCTAGGCACAGGATaGACTATAAGGATTAATGCA +
Preference number: 3 (lower is better)
Translates to: KTTWRVHLTPARMAMNNKILGTG*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATCCTGTGCCTAGGAT...TTTGTTGTTCATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAGTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 72 bp AATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTaGAAAATCCTAGGCACAGGATTGACTATAAGGATT +
Preference number: 3 (lower is better)
Translates to: NVVLFLVSELFP*KILGTGLTIRI
Trigger: AATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CCA 72 bp CTCCTCACATTCATTTGGAAAGGCCCTAATGTCAAATaGAAAATAACGACATGCCAAGCACAAAGCAGTAAA +
Preference number: 3 (lower is better)
Translates to: LLTFIWKGPNVK*KITTCQAQSSK
Trigger: TTTACTGCTTTGTGCTTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAATCCTAGGCACAGGATaGACTATAAGGATTAATGCA +
Preference number: 3 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQILGTG*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATCCTGTGCCTAGGAT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR-3UTR CAA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGGAAGCTGCATTTTATTaGAAAATCCACCCATTTGCT +
Preference number: 3 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLEAAFY*KIHPFA
Trigger: AGCAAATGGGTGGATTTTCAAATAAAATGCAGCTTC...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208089.3
3UTR-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGACAGCAGTTTCAATTTaGCTGGAAGTAAGGAGTTGC +
Preference number: 3 (lower is better)
Translates to: TKIESAETMQQVCLTHVQTAVSI*LEVRSC
Trigger: GCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR TCA 72 bp TCAGTTGTTCATTGCTGCTCTATTCCTAATAGAAATTaGAAACCACCTAGATGTCCCTCAACAGAATGGATA +
Preference number: 3 (lower is better)
Translates to: SVVHCCSIPNRN*KPPRCPSTEWI
Trigger: TATCCATTCTGTTGAGGGACATCTAGGTGGTTTTCAATTTCTATTAGGAATAGAGCAGCAATGAACAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR GCA 72 bp GAATCAATCTACCTCAAGATCCAGCTCTATAAGTATTaGATACATTCAAAAGGACACTTCATCCAACCACAA +
Preference number: 3 (lower is better)
Translates to: ESIYLKIQLYKY*IHSKGHFIQPQ
Trigger: TTGTGGTTGGATGAAGTGTCCTTTTGAATGTATGCAATACTTATAGAGCTGGATCTTGAGGTAGATTGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGATCCTAGGCACAGGATaGACTATAAGGATTAATGCA +
Preference number: 3 (lower is better)
Translates to: TKIESAETMQQVCLTHVQILGTG*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATCCTGTGCCTAGGAT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR TCA 72 bp ACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTaGTTATGGGTATTAATAGGAGTTGAAAGAACTGAA +
Preference number: 3 (lower is better)
Translates to: TLSKYGLFLVGY*LWVLIGVERTE
Trigger: TTCAGTTCTTTCAACTCCTATTAATACCCATAATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGTGTGCTGGGCCGCGGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWCAGPR*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACCGCGGCCCAGCACA...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGATACCGCGGAGCCAGTaGCACTGTGCTGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLIPRSQ*HCAGPR
Trigger: CCGCGGCCCAGCACAGTGTCACTGGCTCCGCGGTAT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGAGCCAGTGACACTGTaGTGGGCCGCGGTGATTCGG +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWEPVTL*WAAVIR
Trigger: CCGAATCACCGCGGCCCAGCACAGTGTCACTGGCTC...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTATACCGCGGAGCCAGTaGCACTGTGCTGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIIPRSQ*HCAGPR
Trigger: CCGCGGCCCAGCACAGTGTCACTGGCTCCGCGGTAT...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGTGTGCTGGGCCGCGGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLCAGPR*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACCGCGGCCCAGCACA...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATACCGCGGAGCCAGTaGCACTGTGCTGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVIPRSQ*HCAGPR
Trigger: CCGCGGCCCAGCACAGTGTCACTGGCTCCGCGGTAT...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AAGAGGCACACTCATGCATTGTTGCTGGGAGCGCAAACTTGTGGTCAGTGTGGTTTTTCTTGGGGCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: KRHTHALLLGAQTCGQCGFSWGP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGCCCCAAGAAAA...ACCACACTGACCACAAGTTTGCGCTCCCAGCAACAATGCATGAGTGTGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGCCAGTGACACTGTGCTaGGCCGCGGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLPVTLC*AAVIRS
Trigger: GGACCGAATCACCGCGGCCCAGCACAGTGTCACTGG...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCAGACGGGTGAAAGGTTaGCTGCTGCAAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALRRVKG*LLQVKQ
Trigger: CTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCT...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTATGTGCTGGGCCGCGGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVCAGPR*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACCGCGGCCCAGCACA...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGCATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGCGTGGACAGACGGGTaGAAGGTTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAAWTDG*KVGCCK
Trigger: CTTGCAGCAGCCAACCTTTCACCCGTCTGTCCACGC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGCGTGGACAGACGGGTaGAAGGTTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLAWTDG*KVGCCK
Trigger: CTTGCAGCAGCCAACCTTTCACCCGTCTGTCCACGC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAGAGCCAGTGACACTGTaGTGGGCCGCGGTGATTCGG +
Preference number: 4 (lower is better)
Translates to: VVLFLVSELFPCKILGTGEPVTL*WAAVIR
Trigger: CCGAATCACCGCGGCCCAGCACAGTGTCACTGGCTC...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACGAGCCAGTGACACTGTaGTGGGCCGCGGTGATTCGG +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINEPVTL*WAAVIR
Trigger: CCGAATCACCGCGGCCCAGCACAGTGTCACTGGCTC...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACCCAGTGACACTGTGCTaGGCCGCGGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINPVTLC*AAVIRS
Trigger: GGACCGAATCACCGCGGCCCAGCACAGTGTCACTGG...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGCTGGGAGGCCACTGTTaGTTTGAGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWLGGHC*FEKSTT
Trigger: GGTGGTGGACTTCTCAAACCAACAGTGGCCTCCCAG...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
3UTR CAA 72 bp GCAAGGATACAGAGTAAGAGGCACACTCATGCATTGTaGCTGGGAGCGCAAACTTGTGGTCAGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ARIQSKRHTHAL*LGAQTCGQCGG
Trigger: CCCACCACACTGACCACAAGTTTGCGCTCCCAGCAACAATGCATGAGTGTGCCTCTTACTCTGTATCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCATACCGCGGAGCCAGTaGCACTGTGCTGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGIPRSQ*HCAGPR
Trigger: CCGCGGCCCAGCACAGTGTCACTGGCTCCGCGGTAT...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTCATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGCATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGGCGTGGACAGACGGGTaGAAGGTTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEAWTDG*KVGCCK
Trigger: CTTGCAGCAGCCAACCTTTCACCCGTCTGTCCACGC...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALGLVVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCACCAAACC...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAGAGCCAGTGACACTGTaGTGGGCCGCGGTGATTCGG +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAEPVTL*WAAVIR
Trigger: CCGAATCACCGCGGCCCAGCACAGTGTCACTGGCTC...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCACTGTCCGCCAACTGTaGGATGTTCACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALTVRQL*DVHIHL
Trigger: GAGATGAATGTGAACATCCCACAGTTGGCGGACAGT...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALCWCNL*LPVRSS
Trigger: GGAGGATCTAACTGGCAACCAAAGGTTGCACCAACA...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTTTTTCTTGGGGCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCFSWGP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGCCCCAAGAAAA...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTCTTGGGGCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEFSWGP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGCCCCAAGAAAA...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGTTTTCTTGGGGCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLFSWGP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGCCCCAAGAAAA...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTACATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAGCGTGGACAGACGGGTaGAAGGTTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVAWTDG*KVGCCK
Trigger: CTTGCAGCAGCCAACCTTTCACCCGTCTGTCCACGC...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTGCGTGGACAGACGGGTaGAAGGTTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTAWTDG*KVGCCK
Trigger: CTTGCAGCAGCCAACCTTTCACCCGTCTGTCCACGC...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCAAAAGTGGATACATCTaGAGCAATGGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALKSGYI*SNGQVN
Trigger: GTTCACCTGCCCATTGCTTCAGATGTATCCACTTTT...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGCGACAGCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAERQLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGCTGTCG...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS-3UTR GCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGCCAGGCAGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWPGSCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACTGCCTGG...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGCATGCCATTCATTGTTaGAGCGCTCCAGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWHAIHC*SAPGSC
Trigger: ACAACTGCCTGGAGCGCTGCAACAATGAATGGCATG...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CAA 72 bp CTGGCAAGGATACAGAGTAAGAGGCACACTCATGCATaGTTGCTGGGAGCGCAAACTTGTGGTCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LARIQSKRHTHA*LLGAQTCGQCG
Trigger: ACCACACTGACCACAAGTTTGCGCTCCCAGCAACAATGCATGAGTGTGCCTCTTACTCTGTATCCTTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAATGTGCTGGGCCGCGGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQCAGPR*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACCGCGGCCCAGCACA...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTTGTGCTGGGCCGCGGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFCAGPR*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACCGCGGCCCAGCACA...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWGLVVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCACCAAACC...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTCACAGAACATGGAGAAGTTGAGCTGGTGCCTACACAGAGCCTTCACCCTATACATGCCATTCATTGTTaGAGCGCTCCAGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LTEHGEVELVPTQSLHPIHAIHC*SAPGSC
Trigger: ACAACTGCCTGGAGCGCTGCAACAATGAATGGCATG...TATAGGGTGAAGGCTCTGTGTAGGCACCAGCTCAACTTCTCCATGTTCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR CCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTCCAGTGACACTGTGCTaGGCCGCGGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIPVTLC*AAVIRS
Trigger: GGACCGAATCACCGCGGCCCAGCACAGTGTCACTGG...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACCTGGGAGGCCACTGTTaGTTTGAGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINLGGHC*FEKSTT
Trigger: GGTGGTGGACTTCTCAAACCAACAGTGGCCTCCCAG...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGTGACACAAAGCTTGTGGGAGTCACCAATCAGTGTCTGACTTGGGCAAACCCATCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: SDTKLVGVTNQCLTWANPSYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...TGGGTTTGCCCAAGTCAGACACTGATTGGTGACTCCCACAAGCTTTGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR CCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTGCCAAAGGGGTTTGGTaGTCTCATGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIAKGVW*SHDRLA
Trigger: AGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGC...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAGCCAAAGGGGTTTGGTaGTCTCATGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VVLFLVSELFPCKILGTGAKGVW*SHDRLA
Trigger: AGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGC...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGATACCGCGGAGCCAGTaGCACTGTGCTGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQIPRSQ*HCAGPR
Trigger: CCGCGGCCCAGCACAGTGTCACTGGCTCCGCGGTAT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCCATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAAGGCCACTGTTGGTTTaGGAAGTCCACCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQARPLLV*EVHHQN
Trigger: ATTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCT...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR TCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGCAACTGGAGAAGGACTaGATCCTCCCCATGTACTCG +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLQLEKD*ILPMYS
Trigger: CGAGTACATGGGGAGGATTCAGTCCTTCTCCAGTTG...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGTGACACAAAGCTTGTGGGAGTCACCAATCAGTGTCTGACTTGGGCAAACCCAAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SDTKLVGVTNQCLTWANPKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...TGGGTTTGCCCAAGTCAGACACTGATTGGTGACTCCCACAAGCTTTGTGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR GCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGTGTTGTAGCCCTGCTTaGAGCTGTGGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWCCSPA*SCGIFD
Trigger: ATCAAAGATTCCACAGCTGCAAGCAGGGCTACAACA...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGACCAGTGACACTGTGCTaGGCCGCGGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRPVTLC*AAVIRS
Trigger: GGACCGAATCACCGCGGCCCAGCACAGTGTCACTGG...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCACATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGCATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCACCCTTTCATCCACTTTaGTCAGAGATAGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAPFHPL*SEIGQC
Trigger: GCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGG...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTAGACGGGTGAAAGGTTaGCTGCTGCAAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFRRVKG*LLQVKQ
Trigger: CTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCT...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTAGACGGGTGAAAGGTTaGCTGCTGCAAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCRRVKG*LLQVKQ
Trigger: CTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCT...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTCTGGGAGGCCACTGTTaGTTTGAGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTLGGHC*FEKSTT
Trigger: GGTGGTGGACTTCTCAAACCAACAGTGGCCTCCCAG...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLSYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAGCCAAAGGGGTTTGGTaGTCTCATGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAAKGVW*SHDRLA
Trigger: AGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGC...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGATGTGGCTGTGCAACTaGAGAAGGACTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLMWLCN*RRTESS
Trigger: GGAGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
3UTR CAA 72 bp CACCACCAACCCTTTCAGATGTTTACCTTCCTCTGCTaGTGTACATCTGGAAGCATTGTTCTCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: HHQPFQMFTFLC*CTSGSIVLPTS
Trigger: TGAGGTGGGGAGAACAATGCTTCCAGATGTACACAAGCAGAGGAAGGTAAACATCTGAAAGGGTTGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCTTTTCTTGGGGCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGFSWGP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGCCCCAAGAAAA...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCAAGCCAAATACTGAATaGAACGCTCATTTCCATACA +
Preference number: 4 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALKPNTE*NAHFHT
Trigger: TGTATGGAAATGAGCGTTTCATTCAGTATTTGGCTT...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAACATTATTCCCCCTGCTaGGGTGGACACCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQHYSPC*GGHRRG
Trigger: GCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATG...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGAACATTAAGGCCAGCTaGAGAATGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLNIKAS*RMWLCN
Trigger: GTTGCACAGCCACATTCTTCAGCTGGCCTTAATGTT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGGCCACTGTTGGTTTaGGAAGTCCACCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINRPLLV*EVHHQN
Trigger: ATTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCT...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR GCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCATATGTCAATGGCTGGTaGAGTCATTATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAYVNGW*SHYSPC
Trigger: GCAGGGGGAATAATGACTGCACCAGCCATTGACATA...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAGATFG*QLDPPV
Trigger: AACTGGAGGATCTAACTGGCAACCAAAGGTTGCACC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLGATFG*QLDPPV
Trigger: AACTGGAGGATCTAACTGGCAACCAAAGGTTGCACC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGCCAGGCAGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLPGSCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACTGCCTGG...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGACCAGGCAGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VVLFLVSELFPCKILGTGPGSCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACTGCCTGG...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACCATGCCATTCATTGTTaGAGCGCTCCAGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINHAIHC*SAPGSC
Trigger: ACAACTGCCTGGAGCGCTGCAACAATGAATGGCATG...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGACTGTCCGCCAACTGTaGGATGTTCACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLTVRQL*DVHIHL
Trigger: GAGATGAATGTGAACATCCCACAGTTGGCGGACAGT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGCATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCCCTTTCATCCACTTTaGTCAGAGATAGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSPFHPL*SEIGQC
Trigger: GCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTCCCTTTCATCCACTTTaGTCAGAGATAGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCPFHPL*SEIGQC
Trigger: GCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGG...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGATGTGGCTGTGCAACTaGAGAAGGACTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLMWLCN*RRTESN
Trigger: GTTGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLCWCNL*LPVRSS
Trigger: GGAGGATCTAACTGGCAACCAAAGGTTGCACCAACA...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGTCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLSYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTTCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSISYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAESYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTTCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFSYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGATGTGGCTGTGCAACTaGAGAAGGACTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLMWLCN*RRTESS
Trigger: GGAGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTATGTGGCTGTGCAACTaGAGAAGGACTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIMWLCN*RRTESS
Trigger: GGAGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTATGTGGCTGTGCAACTaGAGAAGGACTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCMWLCN*RRTESS
Trigger: GGAGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGAAGCAATGGGCAGGTaGACATCACCACTACTTTTT +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAEAMGR*TSPLLF
Trigger: AAAAAGTAGTGGTGATGTTCACCTGCCCATTGCTTC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGAACATTAAGGCCAGCTaGAGAATGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAENIKAS*RMWLCN
Trigger: GTTGCACAGCCACATTCTTCAGCTGGCCTTAATGTT...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTAACATTAAGGCCAGCTaGAGAATGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFNIKAS*RMWLCN
Trigger: GTTGCACAGCCACATTCTTCAGCTGGCCTTAATGTT...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAAGGCCACTGTTGGTTTaGGAAGTCCACCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVRPLLV*EVHHQN
Trigger: ATTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCT...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR TCA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFGLVVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCACCAAACC...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSGLVVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCACCAAACC...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTGAGCCAGTGACACTGTaGTGGGCCGCGGTGATTCGG +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLEPVTL*WAAVIR
Trigger: CCGAATCACCGCGGCCCAGCACAGTGTCACTGGCTC...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGCTGTCAATTCCAACTTaGTCTGCAACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWLSIPT*SATFRN
Trigger: GTTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAG...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCATGTTGTAGCCCTGCTTaGAGCTGTGGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQACCSPA*SCGIFD
Trigger: ATCAAAGATTCCACAGCTGCAAGCAGGGCTACAACA...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTTATGTCAATGGCTGGTaGAGTCATTATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIYVNGW*SHYSPC
Trigger: GCAGGGGGAATAATGACTGCACCAGCCATTGACATA...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACTATGTCAATGGCTGGTaGAGTCATTATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINYVNGW*SHYSPC
Trigger: GCAGGGGGAATAATGACTGCACCAGCCATTGACATA...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLGATFG*QLDPPV
Trigger: AACTGGAGGATCTAACTGGCAACCAAAGGTTGCACC...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCGATFG*QLDPPV
Trigger: AACTGGAGGATCTAACTGGCAACCAAAGGTTGCACC...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VVLFLVSELFPCKILGTGGATFG*QLDPPV
Trigger: AACTGGAGGATCTAACTGGCAACCAAAGGTTGCACC...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCACCAGGCAGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAPGSCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACTGCCTGG...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTCCAGGCAGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTPGSCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACTGCCTGG...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGCCAGTGACACTGTGCTaGGCCGCGGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQPVTLC*AAVIRS
Trigger: GGACCGAATCACCGCGGCCCAGCACAGTGTCACTGG...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTACTGTCCGCCAACTGTaGGATGTTCACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCTVRQL*DVHIHL
Trigger: GAGATGAATGTGAACATCCCACAGTTGGCGGACAGT...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTACTGTCCGCCAACTGTaGGATGTTCACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSITVRQL*DVHIHL
Trigger: GAGATGAATGTGAACATCCCACAGTTGGCGGACAGT...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAACTGTCCGCCAACTGTaGGATGTTCACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: VVLFLVSELFPCKILGTGTVRQL*DVHIHL
Trigger: GAGATGAATGTGAACATCCCACAGTTGGCGGACAGT...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACACTGTCCGCCAACTGTaGGATGTTCACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINTVRQL*DVHIHL
Trigger: GAGATGAATGTGAACATCCCACAGTTGGCGGACAGT...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTACCCTTTCATCCACTTTaGTCAGAGATAGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVPFHPL*SEIGQC
Trigger: GCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGG...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAATACATCTGAAGCAATaGGCAGGTGAACATCACCAC +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAIHLKQ*AGEHHH
Trigger: GTGGTGATGTTCACCTGCCCATTGCTTCAGATGTAT...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGATACATCTGAAGCAATaGGCAGGTGAACATCACCAC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLIHLKQ*AGEHHH
Trigger: GTGGTGATGTTCACCTGCCCATTGCTTCAGATGTAT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGATGTGGCTGTGCAACTaGAGAAGGACTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLMWLCN*RRTESN
Trigger: GTTGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTATGTGGCTGTGCAACTaGAGAAGGACTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCMWLCN*RRTESN
Trigger: GTTGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTAGGGGGCGCGTATTGTaGAAAATGCATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSRGRVL*KMHAIH
Trigger: ATGAATGGCATGCATTTTCCACAATACGCGCCCCCT...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGAGGGGGCGCGTATTGTaGAAAATGCATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLRGRVL*KMHAIH
Trigger: ATGAATGGCATGCATTTTCCACAATACGCGCCCCCT...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCATCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSASYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGTGTGCCTGGAGGGGCTaGATGCTGCCGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLCAWRG*MLPTAV
Trigger: CACAGCTGTCGGCAGCATCCAGCCCCTCCAGGCACA...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
3UTR CAA 72 bp TCCAGTACTAGGATTGGGTTACATTTAATTGAGTTGTaGGCCAAAGGGGTCCCAAGGGATCAACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: SSTRIGLHLIEL*AKGVPRDQQPR
Trigger: CCTGGGTTGTTGATCCCTTGGGACCCCTTTGGCCAACAACTCAATTAAATGTAACCCAATCCTAGTACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
3UTR CAA 72 bp CCTTCCAGTACTAGGATTGGGTTACATTTAATTGAGTaGTTGGCCAAAGGGGTCCCAAGGGATCAACAACCC +
Preference number: 4 (lower is better)
Translates to: PSSTRIGLHLIE*LAKGVPRDQQP
Trigger: GGGTTGTTGATCCCTTGGGACCCCTTTGGCCAACAACTCAATTAAATGTAACCCAATCCTAGTACTGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGATGAGTTGTAATGAGTaGTTTGAAGACCACCACCCA +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLMSCNE*FEDHHP
Trigger: TGGGTGGTGGTCTTCAAATCACTCATTACAACTCAT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GAATGTAGGAGCTCATGGAGGATAGAAGAGGGCATCAGATTCCCCTGGAAATTTGAAGCAATGGGCAGGTaGACATCACCACTACTTTTT +
Preference number: 4 (lower is better)
Translates to: ECRSSWRIEEGIRFPWKFEAMGR*TSPLLF
Trigger: AAAAAGTAGTGGTGATGTTCACCTGCCCATTGCTTC...AAATTTCCAGGGGAATCTGATGCCCTCTTCTATCCTCCATGAGCTCCTACATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGAAAAGTGGATACATCTaGAGCAATGGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEKSGYI*SNGQVN
Trigger: GTTCACCTGCCCATTGCTTCAGATGTATCCACTTTT...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTAAAAGTGGATACATCTaGAGCAATGGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCKSGYI*SNGQVN
Trigger: GTTCACCTGCCCATTGCTTCAGATGTATCCACTTTT...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAAACATTAAGGCCAGCTaGAGAATGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSANIKAS*RMWLCN
Trigger: GTTGCACAGCCACATTCTTCAGCTGGCCTTAATGTT...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAGLVVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCACCAAACC...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLILYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTRPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGTGTTGTAGCCCTGCTTaGAGCTGTGGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLCCSPA*SCGIFD
Trigger: ATCAAAGATTCCACAGCTGCAAGCAGGGCTACAACA...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTTATGTCAATGGCTGGTaGAGTCATTATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTYVNGW*SHYSPC
Trigger: GCAGGGGGAATAATGACTGCACCAGCCATTGACATA...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCATATGTCAATGGCTGGTaGAGTCATTATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAYVNGW*SHYSPC
Trigger: GCAGGGGGAATAATGACTGCACCAGCCATTGACATA...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCAGACGGGTGAAAGGTTaGCTGCTGCAAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGRRVKG*LLQVKQ
Trigger: CTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCT...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTAGACGGGTGAAAGGTTaGCTGCTGCAAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIRRVKG*LLQVKQ
Trigger: CTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCT...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAATGTGGCTGTGCAACTaGAGAAGGACTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAMWLCN*RRTESN
Trigger: GTTGGATTCAGTCCTTCTCCAGTTGCACAGCCACAT...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCTGGGAGGCCACTGTTaGTTTGAGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINLGGHC*FEKSTT
Trigger: GGTGGTGGACTTCTCAAACCAACAGTGGCCTCCCAG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCATGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSACWCNL*LPVRSS
Trigger: GGAGGATCTAACTGGCAACCAAAGGTTGCACCAACA...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VVLFLVSELFPCKILGTGGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAGCCAAAGGGGTTTGGTaGTCTCATGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQAKGVW*SHDRLA
Trigger: AGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGC...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGATGAGTTGTAATGAGTaGTTTGAAGACCACCACCCA +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLMSCNE*FEDHHP
Trigger: TGGGTGGTGGTCTTCAAATCACTCATTACAACTCAT...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACATGAGTTGTAATGAGTaGTTTGAAGACCACCACCCA +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINMSCNE*FEDHHP
Trigger: TGGGTGGTGGTCTTCAAATCACTCATTACAACTCAT...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACCACCACTACTTTTTGTaGGGAAAGGGTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINHHYFL*GKGLSL
Trigger: CAAGCTTAAACCCTTTCCTCACAAAAAGTAGTGGTG...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGCACCACTACTTTTTGTaGGGAAAGGGTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEHHYFL*GKGLSL
Trigger: CAAGCTTAAACCCTTTCCTCACAAAAAGTAGTGGTG...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCCAACAAACATCTCATaGGTAGGTGTCCTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSPTNIS*VGVLVV
Trigger: TACTACTAGGACACCTACTCATGAGATGTTTGTTGG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTCCAACAAACATCTCATaGGTAGGTGTCCTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCPTNIS*VGVLVV
Trigger: TACTACTAGGACACCTACTCATGAGATGTTTGTTGG...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCATTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TACACTGGAGTCCAACAGGGAAGTCACAAGATCTACAAGCTAGAACTAACCAAAGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: YTGVQQGSHKIYKLELTKGLVVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCACCAAACC...TTTGGTTAGTTCTAGCTTGTAGATCTTGTGACTTCCCTGTTGGACTCCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAACTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCAACTGGAGAAGGACTaGATCCTCCCCATGTACTCG +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFQLEKD*ILPMYS
Trigger: CGAGTACATGGGGAGGATTCAGTCCTTCTCCAGTTG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGACAACTGGAGAAGGACTaGATCCTCCCCATGTACTCG +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRQLEKD*ILPMYS
Trigger: CGAGTACATGGGGAGGATTCAGTCCTTCTCCAGTTG...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTTGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCCQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSCQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLVVREV*GFFASS
Trigger: AGAACTTGCAAAGAAACCGCATACCTCTCTAACAAC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGATTGTGGAAAATGCATaGCATTCATTGTTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLIVENA*HSLLQR
Trigger: GCGCTGCAACAATGAATGGCATGCATTTTCCACAAT...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGCGTATTGTGGAAAATaGATGCCATTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLAYCGK*MPFIVA
Trigger: TGCAACAATGAATGGCATGCATTTTCCACAATACGC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAAAAGGGGTCCTTTCCTaGAGCTCTGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQKGVLS*SSVRTV
Trigger: CACAGTCCTCACAGAGCTGCAGGAAAGGACCCCTTT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS-3UTR CCA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGCATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208089.3
CDS-3UTR CCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTAGACGGGTGAAAGGTTaGCTGCTGCAAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFRRVKG*LLQVKQ
Trigger: CTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCT...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAAGACGGGTGAAAGGTTaGCTGCTGCAAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQRRVKG*LLQVKQ
Trigger: CTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTGGTTTAAGCTTGGAATaGCATCCTCAACAGCATCTA +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIGLSLE*HPQQHL
Trigger: TAGATGCTGTTGAGGATGCCATTCCAAGCTTAAACC...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRAPGSC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGC...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTGCCAAAGGGGTTTGGTaGTCTCATGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSAAKGVW*SHDRLA
Trigger: AGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGC...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CAA 72 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTaGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCC +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKE*PPVHLYSWSNS
Trigger: GGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CAA 72 bp TTCACTGGAAACTTCATTGGCCAGCCTGTACACTGGTaGTCCCTGACCAAACTTGGTTCTCAACTAAGTATA +
Preference number: 4 (lower is better)
Translates to: FTGNFIGQPVHW*SLTKLGSQLSI
Trigger: TATACTTAGTTGAGAACCAAGTTTGGTCAGGGACAACCAGTGTACAGGCTGGCCAATGAAGTTTCCAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTCTTGAAGCCAAATACTaGATGAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCLEAKY*MKRSFP
Trigger: TGGAAATGAGCGTTTCATTCAGTATTTGGCTTCAAG...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCTTGAAGCCAAATACTaGATGAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSLEAKY*MKRSFP
Trigger: TGGAAATGAGCGTTTCATTCAGTATTTGGCTTCAAG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCACACCACTACTTTTTGTaGGGAAAGGGTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAHHYFL*GKGLSL
Trigger: CAAGCTTAAACCCTTTCCTCACAAAAAGTAGTGGTG...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCACCAACAAACATCTCATaGGTAGGTGTCCTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAPTNIS*VGVLVV
Trigger: TACTACTAGGACACCTACTCATGAGATGTTTGTTGG...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTTTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGRPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTCTGTCAATTCCAACTTaGTCTGCAACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFLSIPT*SATFRN
Trigger: GTTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAG...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCTGTCAATTCCAACTTaGTCTGCAACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: APLNPSDKMYLQKAPINSLSIPT*SATFRN
Trigger: GTTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCATGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSACQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTATGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVCQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTTGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTCQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LERSNGGRVSETAVSILLVVREV*GFFASS
Trigger: AGAACTTGCAAAGAAACCGCATACCTCTCTAACAAC...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINVVREV*GFFASS
Trigger: AGAACTTGCAAAGAAACCGCATACCTCTCTAACAAC...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTTATGTCAATGGCTGGTaGAGTCATTATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIYVNGW*SHYSPC
Trigger: GCAGGGGGAATAATGACTGCACCAGCCATTGACATA...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCTATGTCAATGGCTGGTaGAGTCATTATTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGYVNGW*SHYSPC
Trigger: GCAGGGGGAATAATGACTGCACCAGCCATTGACATA...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGACATGCCATTCATTGTTaGAGCGCTCCAGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRHAIHC*SAPGSC
Trigger: ACAACTGCCTGGAGCGCTGCAACAATGAATGGCATG...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAATTGTGGAAAATGCATaGCATTCATTGTTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAIVENA*HSLLQR
Trigger: GCGCTGCAACAATGAATGGCATGCATTTTCCACAAT...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGCTCCAGAGAGAGCTCTaGAAAGGGGTCCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLLQREL*KGVLSC
Trigger: GCAGGAAAGGACCCCTTTGCAGAGCTCTCTCTGGAG...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS-3UTR CCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGACATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINHQEDC*GPVKDL
Trigger: CAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCCCTTTCATCCACTTTaGTCAGAGATAGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINPFHPL*SEIGQC
Trigger: GCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TACACTGGAGTCCAACAGGGAAGTCACAAGATCTACAAGCTAGAACTAACCAAAATACATCTGAAGCAATaGGCAGGTGAACATCACCAC +
Preference number: 4 (lower is better)
Translates to: YTGVQQGSHKIYKLELTKIHLKQ*AGEHHH
Trigger: GTGGTGATGTTCACCTGCCCATTGCTTCAGATGTAT...TTTGGTTAGTTCTAGCTTGTAGATCTTGTGACTTCCCTGTTGGACTCCAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR CCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSADCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGGCCAAAGGGGTTTGGTaGTCTCATGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQAKGVW*SHDRLA
Trigger: AGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGC...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTGCCAAAGGGGTTTGGTaGTCTCATGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLAKGVW*SHDRLA
Trigger: AGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGC...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGAAGCCAAATACTGAATaGAACGCTCATTTCCATACA +
Preference number: 4 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEKPNTE*NAHFHT
Trigger: TGTATGGAAATGAGCGTTTCATTCAGTATTTGGCTT...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCGAAGCAATGGGCAGGTaGACATCACCACTACTTTTT +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGEAMGR*TSPLLF
Trigger: AAAAAGTAGTGGTGATGTTCACCTGCCCATTGCTTC...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAAACATTAAGGCCAGCTaGAGAATGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQNIKAS*RMWLCN
Trigger: GTTGCACAGCCACATTCTTCAGCTGGCCTTAATGTT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINRPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTCAACTGGAGAAGGACTaGATCCTCCCCATGTACTCG +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLQLEKD*ILPMYS
Trigger: CGAGTACATGGGGAGGATTCAGTCCTTCTCCAGTTG...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTGTCAAGACCTTCTTTaGACTGGTTCTTTTTCATAT +
Preference number: 4 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLCQDLL*TGSFSY
Trigger: ATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACA...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAVVREV*GFFASS
Trigger: AGAACTTGCAAAGAAACCGCATACCTCTCTAACAAC...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVVVREV*GFFASS
Trigger: AGAACTTGCAAAGAAACCGCATACCTCTCTAACAAC...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFGATFG*QLDPPV
Trigger: AACTGGAGGATCTAACTGGCAACCAAAGGTTGCACC...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQGRLWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCC...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGATGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRCWCNL*LPVRSS
Trigger: GGAGGATCTAACTGGCAACCAAAGGTTGCACCAACA...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINCWCNL*LPVRSS
Trigger: GGAGGATCTAACTGGCAACCAAAGGTTGCACCAACA...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATAGGGGGCGCGTATTGTaGAAAATGCATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINRGRVL*KMHAIH
Trigger: ATGAATGGCATGCATTTTCCACAATACGCGCCCCCT...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTATGAGTTGTAATGAGTaGTTTGAAGACCACCACCCA +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIMSCNE*FEDHHP
Trigger: TGGGTGGTGGTCTTCAAATCACTCATTACAACTCAT...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAAAGCCAAATACTGAATaGAACGCTCATTTCCATACA +
Preference number: 4 (lower is better)
Translates to: SILLEVRSCRLCTCILGVKPNTE*NAHFHT
Trigger: TGTATGGAAATGAGCGTTTCATTCAGTATTTGGCTT...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTAAGCCAAATACTGAATaGAACGCTCATTTCCATACA +
Preference number: 4 (lower is better)
Translates to: LFLVSELFPCKILGTGLTKPNTE*NAHFHT
Trigger: TGTATGGAAATGAGCGTTTCATTCAGTATTTGGCTT...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAAAAAGTGGATACATCTaGAGCAATGGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRKSGYI*SNGQVN
Trigger: GTTCACCTGCCCATTGCTTCAGATGTATCCACTTTT...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCCCAACAAACATCTCATaGGTAGGTGTCCTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGPTNIS*VGVLVV
Trigger: TACTACTAGGACACCTACTCATGAGATGTTTGTTGG...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGAGGCCACTGTTGGTTTaGGAAGTCCACCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLRPLLV*EVHHQN
Trigger: ATTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCT...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR TCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSARPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATGTCAAGACCTTCTTTaGACTGGTTCTTTTTCATAT +
Preference number: 4 (lower is better)
Translates to: VVLFLVSELFPCKILGTGCQDLL*TGSFSY
Trigger: ATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACA...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACTGTCAAGACCTTCTTTaGACTGGTTCTTTTTCATAT +
Preference number: 4 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINCQDLL*TGSFSY
Trigger: ATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACA...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTTGTCAAGACCTTCTTTaGACTGGTTCTTTTTCATAT +
Preference number: 4 (lower is better)
Translates to: AGSKELPPVHLYSWSNSICQDLL*TGSFSY
Trigger: ATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACA...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATTGTTGTAGCCCTGCTTaGAGCTGTGGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINCCSPA*SCGIFD
Trigger: ATCAAAGATTCCACAGCTGCAAGCAGGGCTACAACA...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAATGTTGTAGCCCTGCTTaGAGCTGTGGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQCCSPA*SCGIFD
Trigger: ATCAAAGATTCCACAGCTGCAAGCAGGGCTACAACA...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTTGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLICQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGCCAGGCAGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLPGSCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACTGCCTGG...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGCCCTTTCATCCACTTTaGTCAGAGATAGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLPFHPL*SEIGQC
Trigger: GCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGG...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCGGTTTAAGCTTGGAATaGCATCCTCAACAGCATCTA +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGGLSLE*HPQQHL
Trigger: TAGATGCTGTTGAGGATGCCATTCCAAGCTTAAACC...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSACWCNL*LPVRSS
Trigger: GGAGGATCTAACTGGCAACCAAAGGTTGCACCAACA...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTTCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLSYHAR*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACGGGCATGATAGGA...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGCTTGAAGCCAAATACTaGATGAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLLEAKY*MKRSFP
Trigger: TGGAAATGAGCGTTTCATTCAGTATTTGGCTTCAAG...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp TCCCTGACCAAACTTGGTTCTCAACTAAGTATACCTCCATGTTTTCCTTTCTCACTTGAAGCCAAATACTaGATGAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SLTKLGSQLSIPPCFPFSLEAKY*MKRSFP
Trigger: TGGAAATGAGCGTTTCATTCAGTATTTGGCTTCAAG...TGAGAAAGGAAAACATGGAGGTATACTTAGTTGAGAACCAAGTTTGGTCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCACCACTACTTTTTGTaGGGAAAGGGTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFHHYFL*GKGLSL
Trigger: CAAGCTTAAACCCTTTCCTCACAAAAAGTAGTGGTG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR TCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGAACATTAAGGCCAGCTaGAGAATGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLNIKAS*RMWLCN
Trigger: GTTGCACAGCCACATTCTTCAGCTGGCCTTAATGTT...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGAACATTAAGGCCAGCTaGAGAATGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQNIKAS*RMWLCN
Trigger: GTTGCACAGCCACATTCTTCAGCTGGCCTTAATGTT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCTTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: LNVVLFLVSELFPCKILGFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLKHQED*WGPVKD
Trigger: ATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTT...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTTGTTGTAGCCCTGCTTaGAGCTGTGGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSACCSPA*SCGIFD
Trigger: ATCAAAGATTCCACAGCTGCAAGCAGGGCTACAACA...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAATGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQCQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIVVREV*GFFASS
Trigger: AGAACTTGCAAAGAAACCGCATACCTCTCTAACAAC...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLGATFG*QLDPPV
Trigger: AACTGGAGGATCTAACTGGCAACCAAAGGTTGCACC...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTGGTTTAAGCTTGGAATaGCATCCTCAACAGCATCTA +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFGLSLE*HPQQHL
Trigger: TAGATGCTGTTGAGGATGCCATTCCAAGCTTAAACC...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
3UTR CAA 72 bp GACAATGCAACAAGTATGCTTAACTCATGTACAGAATaGCTTTCCTACAATGAACTGTCCTTCTTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: DNATSMLNSCTE*LSYNELSFLRP
Trigger: GGGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTAAGCATACTTGTTGCATTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
3UTR CAA 72 bp AAGGACACTTCATCCAACCACAAAGGCACTGCTCAGTaGTTCATTGCTGCTCTATTCCTAATAGAAATTGAA +
Preference number: 4 (lower is better)
Translates to: KDTSSNHKGTAQ*FIAALFLIEIE
Trigger: TTCAATTTCTATTAGGAATAGAGCAGCAATGAACAACTGAGCAGTGCCTTTGTGGTTGGATGAAGTGTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR TCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTATGAGTTGTAATGAGTaGTTTGAAGACCACCACCCA +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSAMSCNE*FEDHHP
Trigger: TGGGTGGTGGTCTTCAAATCACTCATTACAACTCAT...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGACTTGAAGCCAAATACTaGATGAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRLEAKY*MKRSFP
Trigger: TGGAAATGAGCGTTTCATTCAGTATTTGGCTTCAAG...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTTTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGACTGTCAATTCCAACTTaGTCTGCAACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: IYNAPYIPERLRILKRFRLSIPT*SATFRN
Trigger: GTTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAG...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCTGTCAATTCCAACTTaGTCTGCAACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINLSIPT*SATFRN
Trigger: GTTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTTGCCAAAGAAGAGACTaGATTGGAAAGTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSACQRRD*IGKCCS
Trigger: GCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCA...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFVVREV*GFFASS
Trigger: AGAACTTGCAAAGAAACCGCATACCTCTCTAACAAC...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTATTGTGGAAAATGCATaGCATTCATTGTTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSAIVENA*HSLLQR
Trigger: GCGCTGCAACAATGAATGGCATGCATTTTCCACAAT...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAGCGTATTGTGGAAAATaGATGCCATTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQAYCGK*MPFIVA
Trigger: TGCAACAATGAATGGCATGCATTTTCCACAATACGC...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCGTATTGTGGAAAATaGATGCCATTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINAYCGK*MPFIVA
Trigger: TGCAACAATGAATGGCATGCATTTTCCACAATACGC...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSAKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp TACAATGAAACAGATATTCCAGAACTGTATCAAGGGAGAGAAAATGGGTTAACCGGTTTAAGCTTGGAATaGCATCCTCAACAGCATCTA +
Preference number: 4 (lower is better)
Translates to: YNETDIPELYQGRENGLTGLSLE*HPQQHL
Trigger: TAGATGCTGTTGAGGATGCCATTCCAAGCTTAAACC...GGTTAACCCATTTTCTCTCCCTTGATACAGTTCTGGAATATCTGTTTCATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR CCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGATACATCTGAAGCAATaGGCAGGTGAACATCACCAC +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQIHLKQ*AGEHHH
Trigger: GTGGTGATGTTCACCTGCCCATTGCTTCAGATGTAT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CCA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: KAVKILPNALMLSFKCSADCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGATGAGTTGTAATGAGTaGTTTGAAGACCACCACCCA +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQMSCNE*FEDHHP
Trigger: TGGGTGGTGGTCTTCAAATCACTCATTACAACTCAT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTAAGCCAAATACTGAATaGAACGCTCATTTCCATACA +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFKPNTE*NAHFHT
Trigger: TGTATGGAAATGAGCGTTTCATTCAGTATTTGGCTT...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGATTGTGGAAAATGCATaGCATTCATTGTTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLIVENA*HSLLQR
Trigger: GCGCTGCAACAATGAATGGCATGCATTTTCCACAAT...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATATGTCAATGGCTaGTGCAGTCATTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLKYVNG*CSHYSP
Trigger: GGGGGAATAATGACTGCACCAGCCATTGACATATTT...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGTTCTTTTCACCTGGTTaGCTCCAACTTACATCATTC +
Preference number: 4 (lower is better)
Translates to: TKIESAETMQQVCLTHVQFFSPG*LQLTSF
Trigger: GAATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAA...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAATGTCAAGACCTTCTTTaGACTGGTTCTTTTTCATAT +
Preference number: 4 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQCQDLL*TGSFSY
Trigger: ATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACA...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATTGTCAAGACCTTCTTTaGACTGGTTCTTTTTCATAT +
Preference number: 4 (lower is better)
Translates to: SELFPCKILGTGLTIRINCQDLL*TGSFSY
Trigger: ATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACA...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTTGTCAAGACCTTCTTTaGACTGGTTCTTTTTCATAT +
Preference number: 4 (lower is better)
Translates to: LFPCKILGTGLTIRINAFCQDLL*TGSFSY
Trigger: ATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACA...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTCTGTCAATTCCAACTTaGTCTGCAACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLLSIPT*SATFRN
Trigger: GTTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAG...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGCTGTCAATTCCAACTTaGTCTGCAACTTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLLSIPT*SATFRN
Trigger: GTTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAG...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR GCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGGCGTATTGTGGAAAATaGATGCCATTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLAYCGK*MPFIVA
Trigger: TGCAACAATGAATGGCATGCATTTTCCACAATACGC...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR TCA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGAAGCCAAATACTGAATaGAACGCTCATTTCCATACA +
Preference number: 4 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLKPNTE*NAHFHT
Trigger: TGTATGGAAATGAGCGTTTCATTCAGTATTTGGCTT...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 90 bp GCTCTGCAAAGGGGTCCTTTCCTGCAGCTCTGTGAGGACTGTGCCTaGAGGGGCTGGATGCTGCCGACAGCTGTGCTCCTGATACAGGGC +
Preference number: 5 (lower is better)
Translates to: ALQRGPFLQLCEDCA*RGWMLPTAVLLIQG
Trigger: GCCCTGTATCAGGAGCACAGCTGTCGGCAGCATCCAGCCCCTCCAGGCACAGTCCTCACAGAGCTGCAGGAAAGGACCCCTTTGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS CCA 90 bp AGAAAGGATCTCCCCATGTACTCGCTCCCTGAGGAGCAGCCGACATaGCGTGGACAGACGGGTGAAAGGTTGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: RKDLPMYSLPEEQPT*RGQTGERLAAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTGTCCACGCCATGTCGGCTGCTCCTCAGGGAGCGAGTACATGGGGAGATCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCCAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCTCGTGGGTCGTGGCCTaGCATACTGTCTTAGATACC +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALSWVVA*HTVLDT
Trigger: GGTATCTAAGACAGTATGCAAGGCCACGACCCACGA...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCGAGGCCACTGTTGGTTaGAGAAGTCCACCACCAGAA +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALEATVG*RSPPPE
Trigger: TTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCTC...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CAA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGCGCTCCAGGCAGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWRSRQL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCG...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALSLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGCAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTCACAGAACATGGAGAAGTTGAGCTGGTGCCTACACAGAGCCTTCACCCTATACAGCGCTCCAGGCAGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LTEHGEVELVPTQSLHPIQRSRQ*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTG...TATAGGGTGAAGGCTCTGTGTAGGCACCAGCTCAACTTCTCCATGTTCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS CCA 90 bp TACACTTCCCATCTGAGGAGGAATTCCATATCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGCCATTACAGGGGGCGCGTATTGTGG +
Preference number: 5 (lower is better)
Translates to: YTSHLRRNSISYHAR*CSSRIGHYRGRVLW
Trigger: CCACAATACGCGCCCCCTGTAATGGCCTATCCTGCTACTACACCAACGGGCATGATAGGATATGGAATTCCTCCTCAGATGGGAAGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS CCA 90 bp TACACTTCCCATCTGAGGAGGAATTCCATATCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGCCATTACAGGGGGCGCCATTGTTGC +
Preference number: 5 (lower is better)
Translates to: YTSHLRRNSISYHAR*CSSRIGHYRGRHCC
Trigger: GCAACAATGGCGCCCCCTGTAATGGCCTATCCTGCTACTACACCAACGGGCATGATAGGATATGGAATTCCTCCTCAGATGGGAAGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGAGATAGGCCAGTGCTaGCCAAAGAAGAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWEIGQC*PKKRLH
Trigger: ATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTC...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTCGCTCCAGGCAGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFRSRQL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCG...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGACGCTCCAGGCAGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: VVLFLVSELFPCKILGTGRSRQL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCG...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCGCTCCAGGCAGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: APLNPSDKMYLQKAPINSRSRQL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 90 bp AAAATATGTCAATGGCTGGTGCAGTCATTATTCCCCCTGCTGAGGTaGACACCGGAGAGGCTGCAGTTGTTAGAGAGGTATGCGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KICQWLVQSLFPLLR*TPERLQLLERYAVS
Trigger: AGAAACCGCATACCTCTCTAACAACTGCAGCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATGACTGCACCAGCCATTGACATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 90 bp GCTCCTGATACAGGGCCAAAGGGGTTTGGTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGTTGTGTCATTACAGGTACACTTCCC +
Preference number: 5 (lower is better)
Translates to: APDTGPKGFGGLMTG*LYIKVGCVITGTLP
Trigger: GGGAAGTGTACCTGTAATGACACAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGCCCTGTATCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCGTTGTAATGAGTGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALVVMSD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCACTCATTACAAC...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALAAVES*IFFPSK
Trigger: CTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGC...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGACACAAAGCTTGTGGGAGTCACCAATCAGTGTCTGACTTGGGCAAACCCAGAGATAGGCCAGTGCTaGCCAAAGAAGAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: SDTKLVGVTNQCLTWANPEIGQC*PKKRLH
Trigger: ATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTC...TGGGTTTGCCCAAGTCAGACACTGATTGGTGACTCCCACAAGCTTTGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTT +
Preference number: 5 (lower is better)
Translates to: APLNPSDKMYLQKAPINSPERLQ*LERYAV
Trigger: AACCGCATACCTCTCTAACAACTGCAGCCTCTCCGG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGCCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTT +
Preference number: 5 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEPERLQ*LERYAV
Trigger: AACCGCATACCTCTCTAACAACTGCAGCCTCTCCGG...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGACCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTT +
Preference number: 5 (lower is better)
Translates to: VVLFLVSELFPCKILGTGPERLQ*LERYAV
Trigger: AACCGCATACCTCTCTAACAACTGCAGCCTCTCCGG...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGACACAAAGCTTGTGGGAGTCACCAATCAGTGTCTGACTTGGGCAAACCCATGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SDTKLVGVTNQCLTWANPWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...TGGGTTTGCCCAAGTCAGACACTGATTGGTGACTCCCACAAGCTTTGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS TCA 90 bp ACAGCTGTGCTCCTGATACAGGGCCAAAGGGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTAAGGTTGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: TAVLLIQGQRGLVVS*QAGCILRLVVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGCCCTGTATCAGGAGCACAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS GCA 90 bp CCTGCTGAGGTGGACACCGGAGAGGCTGCAGTTGTTAGAGAGGTATaGGGTTTCTTTGCAAGTTCTTTTAGACGCTGTTCCTTTAATGCT +
Preference number: 5 (lower is better)
Translates to: PAEVDTGEAAVVREV*GFFASSFRRCSFNA
Trigger: AGCATTAAAGGAACAGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCTCTCTAACAACTGCAGCCTCTCCGGTGTCCACCTCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACTCGTGGGTCGTGGCCTaGCATACTGTCTTAGATACC +
Preference number: 5 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINSWVVA*HTVLDT
Trigger: GGTATCTAAGACAGTATGCAAGGCCACGACCCACGA...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATCGTGGGTCGTGGCCTaGCATACTGTCTTAGATACC +
Preference number: 5 (lower is better)
Translates to: VVLFLVSELFPCKILGTGSWVVA*HTVLDT
Trigger: GGTATCTAAGACAGTATGCAAGGCCACGACCCACGA...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGAGTCTAATGGCATCTTaGAAGAGGAGCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWSLMAS*KRSMKA
Trigger: TGCCTTCATGCTCCTCTTCAAAGATGCCATTAGACT...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCTCTGTCAATTCCAACTaGCTCTGCAACTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALSVNSN*LCNFQK
Trigger: TTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAGA...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGAGATAGGCCAGTGCTaGCCAAAGAAGAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAEIGQC*PKKRLH
Trigger: ATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTCCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTT +
Preference number: 5 (lower is better)
Translates to: LFLVSELFPCKILGTGLTPERLQ*LERYAV
Trigger: AACCGCATACCTCTCTAACAACTGCAGCCTCTCCGG...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGGAGGCCACTGTTGGTTaGAGAAGTCCACCACCAGAA +
Preference number: 5 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEEATVG*RSPPPE
Trigger: TTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCTC...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CAA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTACAGCGCTCCAGGCAGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SILLEVRSCRLCTCILGVQRSRQ*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTG...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGTTACTGGAGCGCTCGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: SYKLVPSRCGPSWVTGALGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...GAGCGCTCCAGTAACCCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 90 bp GTATCTGTGCTCCTGATACAGGGCCAAAGGGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTAAGGTTGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: VSVLLIQGQRGLVVS*QAGCILRLVVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 90 bp CCTGTTCTTCCTCTAATGCTGCCTGTTTTTCCCTTTCATCCACTTTaGTCAGAGATAGGCCAGTGCTTGCCAAAGAAGAGACTGCATTGG +
Preference number: 5 (lower is better)
Translates to: PVLPLMLPVFPFHPL*SEIGQCLPKKRLHW
Trigger: CCAATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGAAAAACAGGCAGCATTAGAGGAAGAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 90 bp ACTAATTTGTTAGGCGGAAGTTTGGCAACAGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTGAGAAGTCCACCACCAGAATCTACA +
Preference number: 5 (lower is better)
Translates to: TNLLGGSLATGRLWF*EATVGLRSPPPEST
Trigger: TGTAGATTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCCTGTTGCCAAACTTCCGCCTAACAAATTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CAA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWAAVES*IFFPSK
Trigger: CTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGC...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGGAGATAGGCCAGTGCTaGCCAAAGAAGAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: LERSNGGRVSETAVSILLEIGQC*PKKRLH
Trigger: ATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTC...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: AGSKELPPVHLYSWSNSISLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTATTGACAACGCTCTCCTATAAACTAGTCCCATCCCGCTGTGGGCCTTCATGGAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCT +
Preference number: 5 (lower is better)
Translates to: VLTTLSYKLVPSRCGPSWRYAVS*QVLLDA
Trigger: AGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCT...CCATGAAGGCCCACAGCGGGATGGGACTAGTTTATAGGAGAGCGTTGTCAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCAGGAAAGGGTTTAAGCTaGGAATGGCATCCTCAACAG +
Preference number: 5 (lower is better)
Translates to: SPNESCCYGKGHNSSLQAGKGLS*EWHPQQ
Trigger: CTGTTGAGGATGCCATTCCAAGCTTAAACCCTTTCC...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: APLNPSDKMYLQKAPINSWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCCGCTCCAGGCAGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LNVVLFLVSELFPCKILGRSRQL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCG...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTTACAGGGGGCGCGTATaGTGGAAAATGCATGCCATT +
Preference number: 5 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIYRGRV*WKMHAI
Trigger: AATGGCATGCATTTTCCACAATACGCGCCCCCTGTA...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS CCA 90 bp ACTAATTTGTTAGGCGGAAGTTTGGCAACAGGAAGACTCTGGTTCTaGGAGGCCACTGTTGGTTTGAGAAGTCCACCTAGTTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: TNLLGGSLATGRLWF*EATVGLRSPPSSSK
Trigger: CTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCCTGTTGCCAAACTTCCGCCTAACAAATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGAGTCTAATGGCATCTTaGAAGAGGAGCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLSLMAS*KRSMKA
Trigger: TGCCTTCATGCTCCTCTTCAAAGATGCCATTAGACT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAGAGATAGGCCAGTGCTaGCCAAAGAAGAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAEIGQC*PKKRLH
Trigger: ATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTC...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCATCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PLNPSDKMYLQKAPINSASLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTCAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCATGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCGCTCCAGGCAGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: SELFPCKILGTGLTIRINRSRQL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTCAGCGCTCCAGGCAGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIQRSRQ*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTG...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: SILLEVRSCRLCTCILGVEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: LFLVSELFPCKILGTGLTEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAAGTCTAATGGCATCTTaGAAGAGGAGCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VVLFLVSELFPCKILGTGSLMAS*KRSMKA
Trigger: TGCCTTCATGCTCCTCTTCAAAGATGCCATTAGACT...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLAAVES*IFFPSK
Trigger: CTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LERSNGGRVSETAVSILLKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: VVLFLVSELFPCKILGTGKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTT +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFPERLQ*LERYAV
Trigger: AACCGCATACCTCTCTAACAACTGCAGCCTCTCCGG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGACAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFRQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGTTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: LERSNGGRVSETAVSILLFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTTTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTTTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTTTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: APLNPSDKMYLQKAPINSFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTCGCTCCAGGCAGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: KAVKILPNALMLSFKCSARSRQL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCG...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCAGCGCTCCAGGCAGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFQRSRQ*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATCAGCGCTCCAGGCAGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SELFPCKILGTGLTIRINQRSRQ*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTG...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTTCGTGGGTCGTGGCCTaGCATACTGTCTTAGATACC +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFSWVVA*HTVLDT
Trigger: GGTATCTAAGACAGTATGCAAGGCCACGACCCACGA...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTGTTGTAATGAGTGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCVVMSD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCACTCATTACAAC...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACGTTGTAATGAGTGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINVVMSD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCACTCATTACAAC...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAAGTCTAATGGCATCTTaGAAGAGGAGCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PLNPSDKMYLQKAPINSASLMAS*KRSMKA
Trigger: TGCCTTCATGCTCCTCTTCAAAGATGCCATTAGACT...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LERSNGGRVSETAVSILLAAVES*IFFPSK
Trigger: CTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGC...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCGAGATAGGCCAGTGCTaGCCAAAGAAGAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: LNVVLFLVSELFPCKILGEIGQC*PKKRLH
Trigger: ATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTC...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAGACAACTTGGAGAGTTCATCTTACACCTGCCAGAATGGCTATGAACAACAAATCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: KTTWRVHLTPARMAMNNKSLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...TTTGTTGTTCATAGCCATTCTGGCAGGTGTAAGATGAACTCTCCAAGTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR CAA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LNVVLFLVSELFPCKILGSLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCT +
Preference number: 5 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCRYAVS*QVLLDA
Trigger: AGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCT...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAGAGGCCACTGTTGGTTaGAGAAGTCCACCACCAGAA +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFREATVG*RSPPPE
Trigger: TTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCTC...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CAA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: SILLEVRSCRLCTCILGVRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: LFLVSELFPCKILGTGLTRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTTTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: LFLVSELFPCKILGTGLTFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCCCCAATGAATCCTGTTGCTATGGTAAAGGACACAACTCTTCTCTCCAGGCACTTCTTTTCACCTGGTaGACTCCAACTTACATCATT +
Preference number: 5 (lower is better)
Translates to: SPNESCCYGKGHNSSLQALLFTW*TPTYII
Trigger: AATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAAG...TGCCTGGAGAGAAGAGTTGTGTCCTTTACCATAGCAACAGGATTCATTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGTGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208089.3
CDS-3UTR CAA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTTACAGGGGGCGCGTATaGTGGAAAATGCATGCCATT +
Preference number: 5 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIYRGRV*WKMHAI
Trigger: AATGGCATGCATTTTCCACAATACGCGCCCCCTGTA...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCTACAGGGGGCGCGTATaGTGGAAAATGCATGCCATT +
Preference number: 5 (lower is better)
Translates to: LNVVLFLVSELFPCKILGYRGRV*WKMHAI
Trigger: AATGGCATGCATTTTCCACAATACGCGCCCCCTGTA...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 90 bp GGTGTCCTAGTAGTAAAAGTGGATACATCTGAAGCAATGGGCAGGTaGACATCACCACTACTTTTTGTGAGGAAAGGGTTTAAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: GVLVVKVDTSEAMGR*TSPLLFVRKGFKLG
Trigger: TCCAAGCTTAAACCCTTTCCTCACAAAAAGTAGTGGTGATGTTCACCTGCCCATTGCTTCAGATGTATCCACTTTTACTACTAGGACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTTCGTGGGTCGTGGCCTaGCATACTGTCTTAGATACC +
Preference number: 5 (lower is better)
Translates to: KAVKILPNALMLSFKCSASWVVA*HTVLDT
Trigger: GGTATCTAAGACAGTATGCAAGGCCACGACCCACGA...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGAGACAGCAGTTTCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGATGTCAAGACCTTCTTaGCACTGGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: RDSSFNFAGSKELPPVHLMSRPS*HWFFFI
Trigger: TATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACAT...CAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGAAACTGCTGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCTCTCCAGGCAGCTTTTCCAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTGTCAATTCCAACTaGCTCTGCAACTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: SLQAAFPTQTPHFPNTGFSVNSN*LCNFQK
Trigger: TTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAGA...AAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTGGAAAAGCTGCCTGGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTTCTGTCAATTCCAACTaGCTCTGCAACTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCSVNSN*LCNFQK
Trigger: TTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAGA...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAGGCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACTCTGTCAATTCCAACTaGCTCTGCAACTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: KAPLNPSDKMYLQKAPINSVNSN*LCNFQK
Trigger: TTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAGA...GTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGGAGCGCTCTAATGGAGGAAGAGTTTCAGAGACAGCAGTTTCAATTTTGCTGTCTGTCAATTCCAACTaGCTCTGCAACTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LERSNGGRVSETAVSILLSVNSN*LCNFQK
Trigger: TTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAGA...CAGCAAAATTGAAACTGCTGTCTCTGAAACTCTTCCTCCATTAGAGCGCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LFLVSELFPCKILGTGLTAAVES*IFFPSK
Trigger: CTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGC...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFSLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCT +
Preference number: 5 (lower is better)
Translates to: LFLVSELFPCKILGTGLTRYAVS*QVLLDA
Trigger: AGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCT...AGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGCCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTT +
Preference number: 5 (lower is better)
Translates to: TKIESAETMQQVCLTHVQPERLQ*LERYAV
Trigger: AACCGCATACCTCTCTAACAACTGCAGCCTCTCCGG...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGCCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTT +
Preference number: 5 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLPERLQ*LERYAV
Trigger: AACCGCATACCTCTCTAACAACTGCAGCCTCTCCGG...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTCAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGCAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: TKIESAETMQQVCLTHVQQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGCAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLQTGER*AAASQA
Trigger: TGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTG...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTCTTCTTTTCACCTGGTaGACTCCAACTTACATCATT +
Preference number: 5 (lower is better)
Translates to: APLNPSDKMYLQKAPINSLLFTW*TPTYII
Trigger: AATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAAG...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTCTTCTTTTCACCTGGTaGACTCCAACTTACATCATT +
Preference number: 5 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCLLFTW*TPTYII
Trigger: AATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAAG...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGCTTCTTTTCACCTGGTaGACTCCAACTTACATCATT +
Preference number: 5 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAELLFTW*TPTYII
Trigger: AATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAAG...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGATGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFRWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATTGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SELFPCKILGTGLTIRINWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGCAGCGCTCCAGGCAGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: TKIESAETMQQVCLTHVQQRSRQ*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTG...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAATACAGGGGGCGCGTATaGTGGAAAATGCATGCCATT +
Preference number: 5 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQYRGRV*WKMHAI
Trigger: AATGGCATGCATTTTCCACAATACGCGCCCCCTGTA...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCAACCCAAGCGATAAGATGTGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: SYNELSFLRPLSTQAIRCGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...ACATCTTATCGCTTGGGTTGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGAGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: VVLFLVSELFPCKILGTGGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...TCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTAGTCTAATGGCATCTTaGAAGAGGAGCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLISLMAS*KRSMKA
Trigger: TGCCTTCATGCTCCTCTTCAAAGATGCCATTAGACT...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACGACATGCCAAGCACAAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGATGTCAAGACCTTCTTaGCACTGGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: TTCQAQSSKDPSQCTNAEMSRPS*HWFFFI
Trigger: TATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACAT...CTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GCCCCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTATGTCAAGACCTTCTTaGCACTGGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: APLNPSDKMYLQKAPINSMSRPS*HWFFFI
Trigger: TATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACAT...ACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GAATGTAGGAGCTCATGGAGGATAGAAGAGGGCATCAGATTCCCCTGGAAATTTATGTCAAGACCTTCTTaGCACTGGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: ECRSSWRIEEGIRFPWKFMSRPS*HWFFFI
Trigger: TATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACAT...AAATTTCCAGGGGAATCTGATGCCCTCTTCTATCCTCCATGAGCTCCTACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207484.2
CDS-3UTR CAA 90 bp GCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAATTCCATTATGTCAAGACCTTCTTaGCACTGGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: AGSKELPPVHLYSWSNSIMSRPS*HWFFFI
Trigger: TATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACAT...AATGGAATTACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTATCTGTCAATTCCAACTaGCTCTGCAACTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: SILLEVRSCRLCTCILGVSVNSN*LCNFQK
Trigger: TTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAGA...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: KAVKILPNALMLSFKCSASLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTGGAAAGGGTTTAAGCTaGGAATGGCATCCTCAACAG +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFGKGLS*EWHPQQ
Trigger: CTGTTGAGGATGCCATTCCAAGCTTAAACCCTTTCC...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGGAAAGGGTTTAAGCTaGGAATGGCATCCTCAACAG +
Preference number: 5 (lower is better)
Translates to: SELFPCKILGTGLTIRINGKGLS*EWHPQQ
Trigger: CTGTTGAGGATGCCATTCCAAGCTTAAACCCTTTCC...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTGAGGCCACTGTTGGTTaGAGAAGTCCACCACCAGAA +
Preference number: 5 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLEATVG*RSPPPE
Trigger: TTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCTC...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS-3UTR CAA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: LNVVLFLVSELFPCKILGRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CACACCTCAAACCAGAACACCGTAACATGTTTTGTGGAAGCTGCATTTTATTTGTTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: HTSNQNTVTCFVEAAFYLFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...CAAATAAAATGCAGCTTCCACAAAACATGTTACGGTGTTCTGGTTTGAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208089.3
CDS-3UTR CAA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTACTTCTTTTCACCTGGTaGACTCCAACTTACATCATT +
Preference number: 5 (lower is better)
Translates to: SILLEVRSCRLCTCILGVLLFTW*TPTYII
Trigger: AATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAAG...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTTGGTGCAACCTTTGGTaGCCAGTTAGATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: KAVKILPNALMLSFKCSAWCNLW*PVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCA...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp TCAATTTTGCTGGAAGTAAGGAGTTGCCGCCTGTGCACTTGTATTCTTGGAGTAGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: SILLEVRSCRLCTCILGVGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...TACTCCAAGAATACAAGTGCACAGGCGGCAACTCCTTACTTCCAGCAAAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 90 bp AAACATCTCATGAGTAGGTGTCCTAGTAGTAAAAGTGGATACATCTaGAGCAATGGGCAGGTGAACATCACCACTACTTTTTGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KHLMSRCPSSKSGYI*SNGQVNITTTFCEE
Trigger: TTCCTCACAAAAAGTAGTGGTGATGTTCACCTGCCCATTGCTTCAGATGTATCCACTTTTACTACTAGGACACCTACTCATGAGATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAAGTCTAATGGCATCTTaGAAGAGGAGCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFRSLMAS*KRSMKA
Trigger: TGCCTTCATGCTCCTCTTCAAAGATGCCATTAGACT...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATAGTCTAATGGCATCTTaGAAGAGGAGCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SELFPCKILGTGLTIRINSLMAS*KRSMKA
Trigger: TGCCTTCATGCTCCTCTTCAAAGATGCCATTAGACT...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CCTCTCAACCCAAGCGATAAGATGTATTTACAGAAAGCACCGATCAACAGTGCAATGTCAAGACCTTCTTaGCACTGGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: PLNPSDKMYLQKAPINSAMSRPS*HWFFFI
Trigger: TATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACAT...TGCACTGTTGATCGGTGCTTTCTGTAAATACATCTTATCGCTTGGGTTGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SELFPCKILGTGLTIRINKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFRKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGGAGATAGGCCAGTGCTaGCCAAAGAAGAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLEIGQC*PKKRLH
Trigger: ATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTC...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TKIESAETMQQVCLTHVQSLSST*VRDRPV
Trigger: CACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGA...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CAACACAAACTCCACACTTTCCAAATACGGGCTTTTCTTGGTAGGTTACTGATTAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCT +
Preference number: 5 (lower is better)
Translates to: QHKLHTFQIRAFLGRLLIRYAVS*QVLLDA
Trigger: AGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCT...AATCAGTAACCTACCAAGAAAAGCCCGTATTTGGAAAGTGTGGAGTTTGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFRRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGATTTCCAATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFRFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAA...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAGTTGTAATGAGTGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQVVMSD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCACTCATTACAAC...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATTTATAATGCGCCCTACATCCCAGAGAGACTGAGAATTCTTAAGAGATTCAGAGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: IYNAPYIPERLRILKRFRAAVES*IFFPSK
Trigger: CTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGC...TCTGAATCTCTTAAGAATTCTCAGTCTCTCTGGGATGTAGGGCGCATTATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AGTGAACTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCT +
Preference number: 5 (lower is better)
Translates to: SELFPCKILGTGLTIRINRYAVS*QVLLDA
Trigger: AGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCT...ATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAGTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTGGAAAGGGTTTAAGCTaGGAATGGCATCCTCAACAG +
Preference number: 5 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLGKGLS*EWHPQQ
Trigger: CTGTTGAGGATGCCATTCCAAGCTTAAACCCTTTCC...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS-3UTR CAA 90 bp TTAAATGTAGTGCTTTTCCTAGTCAGTGAACTGTTCCCTTGCAAAATCCTAGGCCTTCTTTTCACCTGGTaGACTCCAACTTACATCATT +
Preference number: 5 (lower is better)
Translates to: LNVVLFLVSELFPCKILGLLFTW*TPTYII
Trigger: AATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAAG...GCCTAGGATTTTGCAAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTTCTGTCAATTCCAACTaGCTCTGCAACTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFSVNSN*LCNFQK
Trigger: TTTCTGAAAGTTGCAGAGCAAGTTGGAATTGACAGA...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp AAAGCAGTAAAGATCCTTCCCAATGCACTAATGCTGAGTTTTAAATGTAGTGCTGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: KAVKILPNALMLSFKCSAAAVES*IFFPSK
Trigger: CTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGC...AGCACTACATTTAAAACTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: TKIESAETMQQVCLTHVQKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLKEETA*ESVVAL
Trigger: CAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTT...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTGTTCCCTTGCAAAATCCTAGGCACAGGATTGACTATAAGGATTAATGCATTTCTTCTTTTCACCTGGTaGACTCCAACTTACATCATT +
Preference number: 5 (lower is better)
Translates to: LFPCKILGTGLTIRINAFLLFTW*TPTYII
Trigger: AATGATGTAAGTTGGAGTCAACCAGGTGAAAAGAAG...AAATGCATTAATCCTTATAGTCAATCCTGTGCCTAGGATTTTGCAAGGGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGGTTGTAATGAGTGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLVVMSD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCACTCATTACAAC...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp CTCACATTCATTTGGAAAGGCCCTAATGTCAAATGGAAAATAACGACATGCCAAATGTCAAGACCTTCTTaGCACTGGTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: LTFIWKGPNVKWKITTCQMSRPS*HWFFFI
Trigger: TATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACAT...TTGGCATGTCGTTATTTTCCATTTGACATTAGGGCCTTTCCAAATGAATGTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ATAGGAGTTGAAAGAACTGAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCT +
Preference number: 5 (lower is better)
Translates to: IGVERTEVLVTKKTDLSLRYAVS*QVLLDA
Trigger: AGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCT...AAGACTAAGATCTGTCTTTTTGGTGACTAACACTTCAGTTCTTTCAACTCCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp ACAAAAATAGAATCTGCAGAGACAATGCAACAAGTATGCTTAACTCATGTACAGGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: TKIESAETMQQVCLTHVQGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...CTGTACATGAGTTAAGCATACTTGTTGCATTGTCTCTGCAGATTCTATTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS-3UTR CAA 90 bp GAAGTGTTAGTCACCAAAAAGACAGATCTTAGTCTTAAATCATGGCAATTCTTGGGCTGTATATTAAGGTaGGTTGTGTCATTACAGGTA +
Preference number: 5 (lower is better)
Translates to: EVLVTKKTDLSLKSWQFLGCILR*VVSLQV
Trigger: TACCTGTAATGACACAACCAACCTTAATATACAGCC...CAAGAATTGCCATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp AGGGGTCCTTTCCTGCAGCTCTGTGAGGACTGTGCCTaGAGGGGCTGGATGCTGCCGACAGCTGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: RGPFLQLCEDCA*RGWMLPTAVLL
Trigger: CAGGAGCACAGCTGTCGGCAGCATCCAGCCCCTCCAGGCACAGTCCTCACAGAGCTGCAGGAAAGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS CCA 72 bp ACTGTCTTAGATACCGCGGAGCCAGTGACACTGTGCTaGGCCGCGGTGATTCGGTCCGTCAGGCTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: TVLDTAEPVTLC*AAVIRSVRLWP
Trigger: TGGCCAGAGCCTGACGGACCGAATCACCGCGGCCCAGCACAGTGTCACTGGCTCCGCGGTATCTAAGACAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp CTCCCCATGTACTCGCTCCCTGAGGAGCAGCCGACATaGCGTGGACAGACGGGTGAAAGGTTGGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LPMYSLPEEQPT*RGQTGERLAAA
Trigger: TGCAGCAGCCAACCTTTCACCCGTCTGTCCACGCCATGTCGGCTGCTCCTCAGGGAGCGAGTACATGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp TTCCTGCAGCTCTGTGAGGACTGTGCCTGGAGGGGCTaGATGCTGCCGACAGCTGTGCTCCTGATACAGGGC +
Preference number: 6 (lower is better)
Translates to: FLQLCEDCAWRG*MLPTAVLLIQG
Trigger: GCCCTGTATCAGGAGCACAGCTGTCGGCAGCATCCAGCCCCTCCAGGCACAGTCCTCACAGAGCTGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS GCA 72 bp CATACTGTCTTAGATACCGCGGAGCCAGTGACACTGTaGTGGGCCGCGGTGATTCGGTCCGTCAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: HTVLDTAEPVTL*WAAVIRSVRLW
Trigger: CCAGAGCCTGACGGACCGAATCACCGCGGCCCAGCACAGTGTCACTGGCTCCGCGGTATCTAAGACAGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS GCA 72 bp GTCCTCCAGAGAGAGCTCTGCAAAGGGGTCCTTTCCTaGAGCTCTGTGAGGACTGTGCCTGGAGGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: VLQRELCKGVLS*SSVRTVPGGAG
Trigger: TCCAGCCCCTCCAGGCACAGTCCTCACAGAGCTGCAGGAAAGGACCCCTTTGCAGAGCTCTCTCTGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208089.3
CDS CAA 72 bp GAGCAGCCGACATGGCGTGGACAGACGGGTGAAAGGTaGGCTGCTGCAAGTCAAGCAGGTCATTTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: EQPTWRGQTGER*AAASQAGHLAA
Trigger: AGCTGCCAAATGACCTGCTTGACTTGCAGCAGCCAACCTTTCACCCGTCTGTCCACGCCATGTCGGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp AGGGGGCGCCATTGTTGCAGCGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCAGTTAGATCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: RGRHCCSAPGSC*CNLWLPVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTGCAACAATGGCGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208089.3
ENSMUST00000208742.2
CDS GCA 72 bp AGGCCATTACAGGGGGCGCGTATTGTGGAAAATGCATaGCATTCATTGTTGCAGCGCTCCAGGCAGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RPLQGARIVENA*HSLLQRSRQLL
Trigger: CAACAACTGCCTGGAGCGCTGCAACAATGAATGGCATGCATTTTCCACAATACGCGCCCCCTGTAATGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS CCA 72 bp CATCTGAGGAGGAATTCCATATCCTATCATGCCCGTTaGTGTAGTAGCAGGATAGGCCATTACAGGGGGCGC +
Preference number: 6 (lower is better)
Translates to: HLRRNSISYHAR*CSSRIGHYRGR
Trigger: GCGCCCCCTGTAATGGCCTATCCTGCTACTACACCAACGGGCATGATAGGATATGGAATTCCTCCTCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 72 bp CAGGAAGACTCTGGTTCTGGGAGGCCACTGTTGGTTTaGGAAGTCCACCACCAGAATCTACAGCAACATTCG +
Preference number: 6 (lower is better)
Translates to: QEDSGSGRPLLV*EVHHQNLQQHS
Trigger: CGAATGTTGCTGTAGATTCTGGTGGTGGACTTCTCAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000208730.2
CDS CCA 72 bp CATGCCATTCATTGTTGCAGCGCTCCAGGCAGTTGTTaGTGCAACCTTTGGTTGCCAGTTAGATCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: HAIHCCSAPGSC*CNLWLPVRSSS
Trigger: ACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTGCAACAATGAATGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000209068.2
CDS CAA 90 bp CAGTCATTATTCCCCCTGCTGAGGTGGACACCGGAGAGGCTGCAGTaGTTAGAGAGGTATGCGGTTTCTTTGCAAGTTCTTTTAGACGCT +
Preference number: 6 (lower is better)
Translates to: QSLFPLLRWTPERLQ*LERYAVSLQVLLDA
Trigger: AGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCTCTCTAACAACTGCAGCCTCTCCGGTGTCCACCTCAGCAGGGGGAATAATGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 72 bp CTCCTGATACAGGGCCAAAGGGGTTTGGTGGTCTCATaGCAGGCTGGCTGTATATTAAGGTTGGTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: LLIQGQRGLVVS*QAGCILRLVVS
Trigger: TGACACAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGCCCTGTATCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 72 bp CAGGAAGACTCTGGTTCTGGGAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCATCAAAGCCACCAGAAT +
Preference number: 6 (lower is better)
Translates to: QEDSGSGRPLLV*EVHLVHQSHQN
Trigger: ATTCTGGTGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCCCAGAACCAGAGTCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS GCA 72 bp GCAGCGCTCCAGGCAGTTGTTGGTGCAACCTTTGGTTaGCAGTTAGATCCTCCAGTTAACTTCTTTTCACCT +
Preference number: 6 (lower is better)
Translates to: AALQAVVGATFG*QLDPPVNFFSP
Trigger: AGGTGAAAAGAAGTTAACTGGAGGATCTAACTGGCAACCAAAGGTTGCACCAACAACTGCCTGGAGCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 72 bp AGAGATAGGCCAGTGCTTGCCAAAGAAGAGACTGCATaGGAAAGTGTTGTAGCCCTGCTTGCAGCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: RDRPVLAKEETA*ESVVALLAAVE
Trigger: TTCCACAGCTGCAAGCAGGGCTACAACACTTTCCAATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp ACAGGGCCAAAGGGGTTTGGTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGTTGTGTCATTACAGGT +
Preference number: 6 (lower is better)
Translates to: TGPKGFGGLMTG*LYIKVGCVITG
Trigger: ACCTGTAATGACACAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCACCAAACCCCTTTGGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 90 bp GCCTGTTCTTCCTCTAATGCTGCCTGTTTTTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTGCTTGCCAAAGAAGAGACTGCATTG +
Preference number: 6 (lower is better)
Translates to: ACSSSNAACFSLSST*VRDRPVLAKEETAL
Trigger: CAATGCAGTCTCTTCTTTGGCAAGCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGAAAAACAGGCAGCATTAGAGGAAGAACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 90 bp CCCACAAGGTTGGCTAAAGATGAATCCAAGTCGTCAGACACTAATTaGTTAGGCGGAAGTTTGGCAACAGGAAGACTCTGGTTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: PTRLAKDESKSSDTN*LGGSLATGRLWFWE
Trigger: CTCCCAGAACCAGAGTCTTCCTGTTGCCAAACTTCCGCCTAACAAATTAGTGTCTGACGACTTGGATTCATCTTTAGCCAACCTTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 72 bp TCCTCTAATGCTGCCTGTTTTTCCCTTTCATCCACTTaGGTCAGAGATAGGCCAGTGCTTGCCAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: SSNAACFSLSST*VRDRPVLAKEE
Trigger: CTCTTCTTTGGCAAGCACTGGCCTATCTCTGACCAAAGTGGATGAAAGGGAAAAACAGGCAGCATTAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 90 bp TGGACACCGGAGAGGCTGCAGTTGTTAGAGAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCTGTTCCTTTAATGCTTTTAAACGAG +
Preference number: 6 (lower is better)
Translates to: WTPERLQLLERYAVS*QVLLDAVPLMLLNE
Trigger: CTCGTTTAAAAGCATTAAAGGAACAGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCTCTCTAACAACTGCAGCCTCTCCGGTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 72 bp AAGCAATGGGCAGGTGAACATCACCACTACTTTTTGTaGGGAAAGGGTTTAAGCTTGGAATGGCATCCTCAA +
Preference number: 6 (lower is better)
Translates to: KQWAGEHHHYFL*GKGLSLEWHPQ
Trigger: TTGAGGATGCCATTCCAAGCTTAAACCCTTTCCTCACAAAAAGTAGTGGTGATGTTCACCTGCCCATTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS GCA 72 bp AGGAAGCTAAATGTTGTTCTAAAGCATCAAGAAGACTaGTGGGGGCCTGTGAAAGATCTGGAATATCTCCTC +
Preference number: 6 (lower is better)
Translates to: RKLNVVLKHQED*WGPVKDLEYLL
Trigger: GAGGAGATATTCCAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTTTAGAACAACATTTAGCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 72 bp TTGGCTAAAGATGAATCCAAGTCGTCAGACACTAATTaGTTAGGCGGAAGTTTGGCAACAGGAAGACTCTGG +
Preference number: 6 (lower is better)
Translates to: LAKDESKSSDTN*LGGSLATGRLW
Trigger: CCAGAGTCTTCCTGTTGCCAAACTTCCGCCTAACAAATTAGTGTCTGACGACTTGGATTCATCTTTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 72 bp GTGGTTCCATTTCCAATGCCAAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAGTCGTCAGACACTAAT +
Preference number: 6 (lower is better)
Translates to: VVPFPMPRLPTR*AKDESKSSDTN
Trigger: ATTAGTGTCTGACGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAATGGAACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp AAGCTAAATGTTGTTCTAAAGCATCAAGAAGACTGCTaGGGGCCTGTGAAAGATCTGGAATATCTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: KLNVVLKHQEDC*GPVKDLEYLLC
Trigger: ACAGAGGAGATATTCCAGATCTTTCACAGGCCCCCAGCAGTCTTCTTGATGCTTTAGAACAACATTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp TGGTTCCATTTCCAATGCCAAGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGTCGTCAGACACTAATT +
Preference number: 6 (lower is better)
Translates to: WFHFQCQDCPQG*LKMNPSRQTLI
Trigger: AATTAGTGTCTGACGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATTGGAAATGGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 72 bp GAGAGGCTGCAGTTGTTAGAGAGGTATGCGGTTTCTTaGCAAGTTCTTTTAGACGCTGTTCCTTTAATGCTT +
Preference number: 6 (lower is better)
Translates to: ERLQLLERYAVS*QVLLDAVPLML
Trigger: AAGCATTAAAGGAACAGCGTCTAAAAGAACTTGCAAAGAAACCGCATACCTCTCTAACAACTGCAGCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS TCA 72 bp GTAGTAAAAGTGGATACATCTGAAGCAATGGGCAGGTaGACATCACCACTACTTTTTGTGAGGAAAGGGTTT +
Preference number: 6 (lower is better)
Translates to: VVKVDTSEAMGR*TSPLLFVRKGF
Trigger: AAACCCTTTCCTCACAAAAAGTAGTGGTGATGTTCACCTGCCCATTGCTTCAGATGTATCCACTTTTACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS TCA 72 bp ATGAGTAGGTGTCCTAGTAGTAAAAGTGGATACATCTaGAGCAATGGGCAGGTGAACATCACCACTACTTTT +
Preference number: 6 (lower is better)
Translates to: MSRCPSSKSGYI*SNGQVNITTTF
Trigger: AAAAGTAGTGGTGATGTTCACCTGCCCATTGCTTCAGATGTATCCACTTTTACTACTAGGACACCTACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS TCA 72 bp GCAACTGGAGAAGGACTGAATCCAACAAACATCTCATaGGTAGGTGTCCTAGTAGTAAAAGTGGATACATCT +
Preference number: 6 (lower is better)
Translates to: ATGEGLNPTNIS*VGVLVVKVDTS
Trigger: AGATGTATCCACTTTTACTACTAGGACACCTACTCATGAGATGTTTGTTGGATTCAGTCCTTCTCCAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207484.2
ENSMUST00000208742.2
CDS CAA 72 bp TGTCCGCCAACTGTGGGATGTTCACATTCATCTCATTaGTACACTGAATTAAGTAGTCCAGGTGCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: CPPTVGCSHSSH*YTELSSPGAFS
Trigger: AGAAAAAGCACCTGGACTACTTAATTCAGTGTACAAATGAGATGAATGTGAACATCCCACAGTTGGCGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CAA 90 bp ACTGCATTGGAAAGTGTTGTAGCCCTGCTTGCAGCTGTGGAATCTTaGATTTTCTTTCCTTCCAAGGAAGCTAAATGTTGTTCTAAAGCA +
Preference number: 6 (lower is better)
Translates to: TALESVVALLAAVES*IFFPSKEAKCCSKA
Trigger: TGCTTTAGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCCACAGCTGCAAGCAGGGCTACAACACTTTCCAATGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049537.9
ENSMUST00000207084.2
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208089.3
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2
CDS CCA 72 bp GTTAGTAGTTCTTTCAAACAAACTGTCCGCCAACTGTaGGATGTTCACATTCATCTCATTTGTACACTGAAT +
Preference number: 6 (lower is better)
Translates to: VSSSFKQTVRQL*DVHIHLICTLN
Trigger: ATTCAGTGTACAAATGAGATGAATGTGAACATCCCACAGTTGGCGGACAGTTTGTTTGAAAGAACTACTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049537.9
ENSMUST00000207225.2
ENSMUST00000207484.2
ENSMUST00000208730.2
ENSMUST00000208742.2
ENSMUST00000209068.2