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Pregenerated sensors for PIBF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022064

Ensembl transcript IDs: ENSMUST00000022650.9

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TTGCTCTCTGTACTGAGCTGGAGTTCTCTGTACCTGTCTAGGAGCTaGTCATGCTTTCCCAGAGCGTCCTTTTCCGCTGCCACTGCTCGG +
Preference number: 5 (lower is better)
Translates to: LLSVLSWSSLYLSRS*SCFPRASFSAATAR
Trigger: CCGAGCAGTGGCAGCGGAAAAGGACGCTCTGGGAAAGCATGAGCAGCTCCTAGACAGGTACAGAGAACTCCAGCTCAGTACAGAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 90 bp TCAACTTGCTCTGATGGAGAAACTCAGATACCTTGCTCTCTGTACTaGGCTGGAGTTCTCTGTACCTGTCTAGGAGCTGCTCATGCTTTC +
Preference number: 5 (lower is better)
Translates to: STCSDGETQIPCSLY*AGVLCTCLGAAHAF
Trigger: GAAAGCATGAGCAGCTCCTAGACAGGTACAGAGAACTCCAGCTCAGTACAGAGAGCAAGGTATCTGAGTTTCTCCATCAGAGCAAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 90 bp CCTCCAATTTCTTCTGATATTTTTCACACTCCAACTGGCACTGCGTaGGATTTCTTGCAGTTTCCTCTTGCAGGAGTTGAACACGCTCAC +
Preference number: 5 (lower is better)
Translates to: PPISSDIFHTPTGTA*DFLQFPLAGVEHAH
Trigger: GTGAGCGTGTTCAACTCCTGCAAGAGGAAACTGCAAGAAATCTCACGCAGTGCCAGTTGGAGTGTGAAAAATATCAGAAGAAATTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 90 bp CTTCTGATATTTTTCACACTCCAACTGGCACTGCGTGAGATTTCTTaGAGTTTCCTCTTGCAGGAGTTGAACACGCTCACTTTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LLIFFTLQLALREIS*SFLLQELNTLTFKG
Trigger: TCCTTTGAAAGTGAGCGTGTTCAACTCCTGCAAGAGGAAACTGCAAGAAATCTCACGCAGTGCCAGTTGGAGTGTGAAAAATATCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 90 bp AGTTCAGCGTTGTTTCTTCGATCTTCTTCATATGTCTCCGTCAGCTaGTTCAGTTGGCCTTTACTTGTACTCAGTTCTTCAGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SSALFLRSSSYVSVS*FSWPLLVLSSSESS
Trigger: TGAACTCTCTGAAGAACTGAGTACAAGTAAAGGCCAACTGAAGCAGCTGACGGAGACATATGAAGAAGATCGAAGAAACAACGCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CCA 90 bp TTGTTTCTTCGATCTTCTTCATATGTCTCCGTCAGCTGCTTCAGTTaGCCTTTACTTGTACTCAGTTCTTCAGAGAGTTCACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LFLRSSSYVSVSCFS*PLLVLSSSESSLFF
Trigger: GAAGAAGAGTGAACTCTCTGAAGAACTGAGTACAAGTAAAGGCCAACTGAAGCAGCTGACGGAGACATATGAAGAAGATCGAAGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CCA 90 bp CTGACTCTTGGGCCACTCTTGTGCTTCCTTTTTAGTAAAGAGCGTTaGCTTGGGTATAAATATATTCTCTTCATGTTCTCTTGGCATATT +
Preference number: 5 (lower is better)
Translates to: LTLGPLLCFLFSKER*LGYKYILFMFSWHI
Trigger: AATATGCCAAGAGAACATGAAGAGAATATATTTATACCCAAGCCAACGCTCTTTACTAAAAAGGAAGCACAAGAGTGGCCCAAGAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 90 bp TTGACTTTACCTTCTCGCTCCTCTGATGATGAGACATCATCTGTATaGATGGTTGTTTCCAAACTAATATCTTCAGACTCCAGAGAACTA +
Preference number: 5 (lower is better)
Translates to: LTLPSRSSDDETSSV*MVVSKLISSDSREL
Trigger: TAGTTCTCTGGAGTCTGAAGATATTAGTTTGGAAACAACCATTCATACAGATGATGTCTCATCATCAGAGGAGCGAGAAGGTAAAGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 72 bp CTCATGCTTTCCCAGAGCGTCCTTTTCCGCTGCCACTaGTCGGTTCTTTTCAGCGAGTGCATTATCCCTTGC +
Preference number: 6 (lower is better)
Translates to: LMLSQSVLFRCH*SVLFSECIIPC
Trigger: GCAAGGGATAATGCACTCGCTGAAAAGAACCGAGCAGTGGCAGCGGAAAAGGACGCTCTGGGAAAGCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 72 bp ATGATGATCTGCTTCATAGCTGCAAATTCCTCGCGGTaGCTGAGGAGCTGCTCCAGATCCAGTGCCATCTGG +
Preference number: 6 (lower is better)
Translates to: MMICFIAANSSR*LRSCSRSSAIW
Trigger: CCAGATGGCACTGGATCTGGAGCAGCTCCTCAGTCACCGCGAGGAATTTGCAGCTATGAAGCAGATCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CAA 90 bp CAGCCGATCCTCCTCATGGGCACAGCGTACACTGAGTTCCATGTTTaGGCGATTGAGGTAGTCTTTATCCTTCTGCAGCAGGGTGACTGT +
Preference number: 6 (lower is better)
Translates to: QPILLMGTAYTEFHV*AIEVVFILLQQGDC
Trigger: ACAGTCACCCTGCTGCAGAAGGATAAAGACTACCTCAATCGCCAAAACATGGAACTCAGTGTACGCTGTGCCCATGAGGAGGATCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CAA 72 bp CTCTTCTCTAGCCTTTTTGGTGTCTTCCAGTTGAACTaGCAGCCTTTCCAGCCGATCCTCCTCATGGGCACA +
Preference number: 6 (lower is better)
Translates to: LFSSLFGVFQLN*QPFQPILLMGT
Trigger: TGTGCCCATGAGGAGGATCGGCTGGAAAGGCTGCAAGTTCAACTGGAAGACACCAAAAAGGCTAGAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 72 bp AGCTGCTCCAGATCCAGTGCCATCTGGTTCTTCGTCTaGAGCAGGGCTGACTTCTCTTTATTTAAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SCSRSSAIWFFV*SRADFSLFKLL
Trigger: CAGCAACTTAAATAAAGAGAAGTCAGCCCTGCTGCAGACGAAGAACCAGATGGCACTGGATCTGGAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CCA 72 bp TGGAGAAACTCAGATACCTTGCTCTCTGTACTGAGCTaGAGTTCTCTGTACCTGTCTAGGAGCTGCTCATGC +
Preference number: 6 (lower is better)
Translates to: WRNSDTLLSVLS*SSLYLSRSCSC
Trigger: GCATGAGCAGCTCCTAGACAGGTACAGAGAACTCCAGCTCAGTACAGAGAGCAAGGTATCTGAGTTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CAA 72 bp CTCCTCATGGGCACAGCGTACACTGAGTTCCATGTTTaGGCGATTGAGGTAGTCTTTATCCTTCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LLMGTAYTEFHV*AIEVVFILLQQ
Trigger: CTGCTGCAGAAGGATAAAGACTACCTCAATCGCCAAAACATGGAACTCAGTGTACGCTGTGCCCATGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 72 bp TCTGATGGAGAAACTCAGATACCTTGCTCTCTGTACTaGGCTGGAGTTCTCTGTACCTGTCTAGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SDGETQIPCSLY*AGVLCTCLGAA
Trigger: AGCAGCTCCTAGACAGGTACAGAGAACTCCAGCTCAGTACAGAGAGCAAGGTATCTGAGTTTCTCCATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 72 bp TTTTTCACACTCCAACTGGCACTGCGTGAGATTTCTTaGAGTTTCCTCTTGCAGGAGTTGAACACGCTCACT +
Preference number: 6 (lower is better)
Translates to: FFTLQLALREIS*SFLLQELNTLT
Trigger: AGTGAGCGTGTTCAACTCCTGCAAGAGGAAACTGCAAGAAATCTCACGCAGTGCCAGTTGGAGTGTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 72 bp TGCGTGAGATTTCTTGCAGTTTCCTCTTGCAGGAGTTaGACACGCTCACTTTCAAAGGACTTCAACTTGCTC +
Preference number: 6 (lower is better)
Translates to: CVRFLAVSSCRS*TRSLSKDFNLL
Trigger: GAGCAAGTTGAAGTCCTTTGAAAGTGAGCGTGTTCAACTCCTGCAAGAGGAAACTGCAAGAAATCTCACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 72 bp GACATCTTTCTCAAGTTGAGCTGTAGACTTCATCAGTaGGTCAATCTTGGCATCTCTCTGTCGCACAGACTC +
Preference number: 6 (lower is better)
Translates to: DIFLKLSCRLHQ*VNLGISLSHRL
Trigger: GAGTCTGTGCGACAGAGAGATGCCAAGATTGACTCACTGATGAAGTCTACAGCTCAACTTGAGAAAGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 72 bp GGAGTTGAACACGCTCACTTTCAAAGGACTTCAACTTaGTCTGATGGAGAAACTCAGATACCTTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: GVEHAHFQRTST*SDGETQIPCSL
Trigger: CAGAGAGCAAGGTATCTGAGTTTCTCCATCAGAGCAAGTTGAAGTCCTTTGAAAGTGAGCGTGTTCAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 72 bp CTAGGTCTTCATCTTCTGACTCTTGGGCCACTCTTGTaGTTCCTTTTTAGTAAAGAGCGTTGGCTTGGGTAT +
Preference number: 6 (lower is better)
Translates to: LGLHLLTLGPLL*FLFSKERWLGY
Trigger: ATACCCAAGCCAACGCTCTTTACTAAAAAGGAAGCACAAGAGTGGCCCAAGAGTCAGAAGATGAAGACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CAA 72 bp CCACTGCTCGGTTCTTTTCAGCGAGTGCATTATCCCTaGCTTCACGGAGATTTCTGTTTTCTCGTTCATACA +
Preference number: 6 (lower is better)
Translates to: PLLGSFQRVHYP*LHGDFCFLVHT
Trigger: TGTATGAACGAGAAAACAGAAATCTCCGTGAAGCAAGGGATAATGCACTCGCTGAAAAGAACCGAGCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 72 bp CACTGCTCGGTTCTTTTCAGCGAGTGCATTATCCCTTaGTTCACGGAGATTTCTGTTTTCTCGTTCATACAT +
Preference number: 6 (lower is better)
Translates to: HCSVLFSECIIP*FTEISVFSFIH
Trigger: ATGTATGAACGAGAAAACAGAAATCTCCGTGAAGCAAGGGATAATGCACTCGCTGAAAAGAACCGAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CCA 72 bp ATCTGTAGGGCTGCTGAGTCTGATTCAACAGTGAATTaGCTCTGTCAAGCTCTTGTGAAAGCTGTCTTACTT +
Preference number: 6 (lower is better)
Translates to: ICRAAESDSTVN*LCQALVKAVLL
Trigger: AAGTAAGACAGCTTTCACAAGAGCTTGACAGAGCCAATTCACTGTTGAATCAGACTCAGCAGCCCTACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 72 bp CCTTCTCGCTCCTCTGATGATGAGACATCATCTGTATaGATGGTTGTTTCCAAACTAATATCTTCAGACTCC +
Preference number: 6 (lower is better)
Translates to: PSRSSDDETSSV*MVVSKLISSDS
Trigger: GGAGTCTGAAGATATTAGTTTGGAAACAACCATTCATACAGATGATGTCTCATCATCAGAGGAGCGAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS GCA 72 bp TTGTTTCTTCGATCTTCTTCATATGTCTCCGTCAGCTaGTTCAGTTGGCCTTTACTTGTACTCAGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LFLRSSSYVSVS*FSWPLLVLSSS
Trigger: TGAAGAACTGAGTACAAGTAAAGGCCAACTGAAGCAGCTGACGGAGACATATGAAGAAGATCGAAGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CAA 72 bp AGTATCTCTTTTCTTTCGATTAACTGCCTGGTGATTTaGACTTTACCTTCTCGCTCCTCTGATGATGAGACA +
Preference number: 6 (lower is better)
Translates to: SISFLSINCLVI*TLPSRSSDDET
Trigger: TGTCTCATCATCAGAGGAGCGAGAAGGTAAAGTCAAAATCACCAGGCAGTTAATCGAAAGAAAAGAGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CAA 90 bp CTCTTGGGCCACTCTTGTGCTTCCTTTTTAGTAAAGAGCGTTGGCTaGGGTATAAATATATTCTCTTCATGTTCTCTTGGCATATTCAAA +
Preference number: 6 (lower is better)
Translates to: LLGHSCASFLVKSVG*GINIFSSCSLGIFK
Trigger: TTTGAATATGCCAAGAGAACATGAAGAGAATATATTTATACCCAAGCCAACGCTCTTTACTAAAAAGGAAGCACAAGAGTGGCCCAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS CAA 72 bp CACTCTTGTGCTTCCTTTTTAGTAAAGAGCGTTGGCTaGGGTATAAATATATTCTCTTCATGTTCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: HSCASFLVKSVG*GINIFSSCSLG
Trigger: GCCAAGAGAACATGAAGAGAATATATTTATACCCAAGCCAACGCTCTTTACTAAAAAGGAAGCACAAGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9
CDS TCA 72 bp AACTGTTTTGTGTCTGCTAATTCTAAGGTCAAACGTTaGCATCGAATTAGAAGTTCAGCGTTGTTTCTTCGA +
Preference number: 6 (lower is better)
Translates to: NCFVSANSKVKR*HRIRSSALFLR
Trigger: TCGAAGAAACAACGCTGAACTTCTAATTCGATGTCAACGTTTGACCTTAGAATTAGCAGACACAAAACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022650.9